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Pregenerated sensors for KCNJ13 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079436

Ensembl transcript IDs: ENSMUST00000113212.4, ENSMUST00000174179.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGTGTCTCCAGAGAGAAGGAGAATGCAGCTGTGAAGCTGGTGATGTaGTTCACACAGATAGTGTGGTTTTCAGGTGGGACGTCGTGGTCT +
Preference number: 5 (lower is better)
Translates to: CVSREKENAAVKLVM*FTQIVWFSGGTSWS
Trigger: AGACCACGACGTCCCACCTGAAAACCACACTATCTGTGTGAAGCACATCACCAGCTTCACAGCTGCATTCTCCTTCTCTCTGGAGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 90 bp CTTTGGAACCTCGAGTCATTAGAGCTGCAAATCGGTGATGTAACATaGTCTCAGAGGGCAGGTAGGATGTCCTCCTTTGGCAGATTTCCC +
Preference number: 5 (lower is better)
Translates to: LWNLESLELQIGDVT*SQRAGRMSSFGRFP
Trigger: GGGAAATCTGCCAAAGGAGGACATCCTACCTGCCCTCTGAGATCATGTTACATCACCGATTTGCAGCTCTAATGACTCGAGGTTCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CCA 90 bp GTGATGTGCTTCACACAGATAGTGTGGTTTTCAGGTGGGACGTCGTaGTCTATTTCCAGATCACCATTCATCTCAGCTACAGCATACCAG +
Preference number: 5 (lower is better)
Translates to: VMCFTQIVWFSGGTS*SISRSPFISATAYQ
Trigger: CTGGTATGCTGTAGCTGAGATGAATGGTGATCTGGAAATAGACCACGACGTCCCACCTGAAAACCACACTATCTGTGTGAAGCACATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CCA 90 bp TGTGAAGCTGGTGATGTGCTTCACACAGATAGTGTGGTTTTCAGGTaGGACGTCGTGGTCTATTTCCAGATCACCATTCATCTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: CEAGDVLHTDSVVFR*DVVVYFQITIHLSY
Trigger: GTAGCTGAGATGAATGGTGATCTGGAAATAGACCACGACGTCCCACCTGAAAACCACACTATCTGTGTGAAGCACATCACCAGCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 90 bp CGGGTGTTGGCCACTTGGAAGATAAGATTAGGTTTGCCATCTTTGTaGGCTACAACTGCTAAGTCAGTGAATCGAATTGAGAAAGCTCTA +
Preference number: 5 (lower is better)
Translates to: RVLATWKIRLGLPSL*ATTAKSVNRIEKAL
Trigger: TAGAGCTTTCTCAATTCGATTCACTGACTTAGCAGTTGTAGCTCACAAAGATGGCAAACCTAATCTTATCTTCCAAGTGGCCAACACCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 90 bp GTTGGATGTTCAGGAACAGTCTTGTCAAAATTCTCCATCTTGACTTaGTACTCACCTTTGGAACCTCGAGTCATTAGAGCTGCAAATCGG +
Preference number: 5 (lower is better)
Translates to: VGCSGTVLSKFSILT*YSPLEPRVIRAANR
Trigger: CCGATTTGCAGCTCTAATGACTCGAGGTTCCAAAGGTGAGTATCAAGTCAAGATGGAGAATTTTGACAAGACTGTTCCTGAACATCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 90 bp CAGGTGTTGGATGTTCAGGAACAGTCTTGTCAAAATTCTCCATCTTaGCTTGATACTCACCTTTGGAACCTCGAGTCATTAGAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: QVLDVQEQSCQNSPS*LDTHLWNLESLELQ
Trigger: TTGCAGCTCTAATGACTCGAGGTTCCAAAGGTGAGTATCAAGTCAAGATGGAGAATTTTGACAAGACTGTTCCTGAACATCCAACACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 90 bp CCTGTTTCAGCAATCTGGAAATTGTCAATGCTTTGTCCATTGATATaGATATCTAGGTCAGTCCTGTGTGGACTCTTAGAGACCACAGGT +
Preference number: 5 (lower is better)
Translates to: PVSAIWKLSMLCPLI*ISRSVLCGLLETTG
Trigger: ACCTGTGGTCTCTAAGAGTCCACACAGGACTGACCTAGATATTCATATCAATGGACAAAGCATTGACAATTTCCAGATTGCTGAAACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CCA 72 bp CTCTTTCCTGATAGAGTACAGCAGAGACACGAACGTTaGTCAGAGGGCTGGGCCGGGTGTTGGCCACTTGGA +
Preference number: 6 (lower is better)
Translates to: LFPDRVQQRHER*SEGWAGCWPLG
Trigger: TCCAAGTGGCCAACACCCGGCCCAGCCCTCTGACCAACGTTCGTGTCTCTGCTGTACTCTATCAGGAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CAA 72 bp AACGTTGGTCAGAGGGCTGGGCCGGGTGTTGGCCACTaGGAAGATAAGATTAGGTTTGCCATCTTTGTGAGC +
Preference number: 6 (lower is better)
Translates to: NVGQRAGPGVGH*EDKIRFAIFVS
Trigger: GCTCACAAAGATGGCAAACCTAATCTTATCTTCCAAGTGGCCAACACCCGGCCCAGCCCTCTGACCAACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CAA 90 bp AGAGACACGAACGTTGGTCAGAGGGCTGGGCCGGGTGTTGGCCACTaGGAAGATAAGATTAGGTTTGCCATCTTTGTGAGCTACAACTGC +
Preference number: 6 (lower is better)
Translates to: RDTNVGQRAGPGVGH*EDKIRFAIFVSYNC
Trigger: GCAGTTGTAGCTCACAAAGATGGCAAACCTAATCTTATCTTCCAAGTGGCCAACACCCGGCCCAGCCCTCTGACCAACGTTCGTGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 72 bp CTCGAGTCATTAGAGCTGCAAATCGGTGATGTAACATaGTCTCAGAGGGCAGGTAGGATGTCCTCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: LESLELQIGDVT*SQRAGRMSSFG
Trigger: GCCAAAGGAGGACATCCTACCTGCCCTCTGAGATCATGTTACATCACCGATTTGCAGCTCTAATGACTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS GCA 72 bp AGAGAGAAGGAGAATGCAGCTGTGAAGCTGGTGATGTaGTTCACACAGATAGTGTGGTTTTCAGGTGGGACG +
Preference number: 6 (lower is better)
Translates to: REKENAAVKLVM*FTQIVWFSGGT
Trigger: CGTCCCACCTGAAAACCACACTATCTGTGTGAAGCACATCACCAGCTTCACAGCTGCATTCTCCTTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 72 bp CTGTGGCCGTCTTTTGTGACCATCCTCCGGTGTCTTTaGCTCAGGAGAGGAGCATTCACTTTACAATTACTG +
Preference number: 6 (lower is better)
Translates to: LWPSFVTILRCL*LRRGAFTLQLL
Trigger: CAGTAATTGTAAAGTGAATGCTCCTCTCCTGAGTCAAAGACACCGGAGGATGGTCACAAAAGACGGCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113212.4
ENSMUST00000174179.2
CDS GCA 72 bp GCAGGTAGGATGTCCTCCTTTGGCAGATTTCCCCAGTaGCTTCTTGCATTGCTGAGAGGAACACAACTAATT +
Preference number: 6 (lower is better)
Translates to: AGRMSSFGRFPQ*LLALLRGTQLI
Trigger: AATTAGTTGTGTTCCTCTCAGCAATGCAAGAAGGCACTGGGGAAATCTGCCAAAGGAGGACATCCTACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CAA 72 bp GCTGTGGCCGTCTTTTGTGACCATCCTCCGGTGTCTTaGACTCAGGAGAGGAGCATTCACTTTACAATTACT +
Preference number: 6 (lower is better)
Translates to: AVAVFCDHPPVS*TQERSIHFTIT
Trigger: AGTAATTGTAAAGTGAATGCTCCTCTCCTGAGTCAAAGACACCGGAGGATGGTCACAAAAGACGGCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113212.4
ENSMUST00000174179.2
CDS CAA 90 bp TGGACAGTCACCACTGGGAAACATGGTACCATAACCAATTGTAAGTaGTGTCTCCAGAGAGAAGGAGAATGCAGCTGTGAAGCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: WTVTTGKHGTITNCK*CLQREGECSCEAGD
Trigger: ATCACCAGCTTCACAGCTGCATTCTCCTTCTCTCTGGAGACACAACTTACAATTGGTTATGGTACCATGTTTCCCAGTGGTGACTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CCA 72 bp GGTGATGTGCTTCACACAGATAGTGTGGTTTTCAGGTaGGACGTCGTGGTCTATTTCCAGATCACCATTCAT +
Preference number: 6 (lower is better)
Translates to: GDVLHTDSVVFR*DVVVYFQITIH
Trigger: ATGAATGGTGATCTGGAAATAGACCACGACGTCCCACCTGAAAACCACACTATCTGTGTGAAGCACATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CAA 72 bp CTAGGAGCATTTGTATGGCAAGTAAGGCGATTGCACTaGGACAGTCACCACTGGGAAACATGGTACCATAAC +
Preference number: 6 (lower is better)
Translates to: LGAFVWQVRRLH*DSHHWETWYHN
Trigger: GTTATGGTACCATGTTTCCCAGTGGTGACTGTCCAAGTGCAATCGCCTTACTTGCCATACAAATGCTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CCA 72 bp TTCACACAGATAGTGTGGTTTTCAGGTGGGACGTCGTaGTCTATTTCCAGATCACCATTCATCTCAGCTACA +
Preference number: 6 (lower is better)
Translates to: FTQIVWFSGGTS*SISRSPFISAT
Trigger: TGTAGCTGAGATGAATGGTGATCTGGAAATAGACCACGACGTCCCACCTGAAAACCACACTATCTGTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CCA 72 bp GTCAGTCCTGTGTGGACTCTTAGAGACCACAGGTGTTaGATGTTCAGGAACAGTCTTGTCAAAATTCTCCAT +
Preference number: 6 (lower is better)
Translates to: VSPVWTLRDHRC*MFRNSLVKILH
Trigger: ATGGAGAATTTTGACAAGACTGTTCCTGAACATCCAACACCTGTGGTCTCTAAGAGTCCACACAGGACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS CCA 72 bp AACACAACTAATTCAAAGTGTGGAGGAGTCTCATGTTaGAGCAGGGTAGCTAGAGGACTTGATGGTGAGATA +
Preference number: 6 (lower is better)
Translates to: NTTNSKCGGVSC*SRVARGLDGEI
Trigger: TATCTCACCATCAAGTCCTCTAGCTACCCTGCTCCAACATGAGACTCCTCCACACTTTGAATTAGTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 72 bp GCAATCTGGAAATTGTCAATGCTTTGTCCATTGATATaGATATCTAGGTCAGTCCTGTGTGGACTCTTAGAG +
Preference number: 6 (lower is better)
Translates to: AIWKLSMLCPLI*ISRSVLCGLLE
Trigger: CTCTAAGAGTCCACACAGGACTGACCTAGATATTCATATCAATGGACAAAGCATTGACAATTTCCAGATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4
CDS TCA 72 bp TTTCAGCAATCTGGAAATTGTCAATGCTTTGTCCATTaGTATGAATATCTAGGTCAGTCCTGTGTGGACTCT +
Preference number: 6 (lower is better)
Translates to: FQQSGNCQCFVH*YEYLGQSCVDS
Trigger: AGAGTCCACACAGGACTGACCTAGATATTCATATCAATGGACAAAGCATTGACAATTTCCAGATTGCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113212.4