Pregenerated sensors for KCNJ12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042529Ensembl transcript IDs: ENSMUST00000041944.9, ENSMUST00000089184.11, ENSMUST00000108717.3
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACTCGCTTAAGGCCCTGGCCCACGTGAGGGAGAAAACAGACCTCTaGGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGC | + |
|
Preference number: 1 (lower is better) Translates to: NSLKALAHVREKTDL*EPSGFSVQLLAWQR Trigger: GCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCTGTTTTCTCCCTCACGTGGGCCAGGGCCTTAAGCGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR TCA 90 bp | GGGCTGGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTAACTCCTaGGCAACCCTACCCCAAGAAGTCACCTCCTTGCCCATGGGTATA | + |
|
Preference number: 1 (lower is better) Translates to: GLGPAPKASSRVPNS*ATLPQEVTSLPMGI Trigger: TATACCCATGGGCAAGGAGGTGACTTCTTGGGGTAGGGTTGCTCAGGAGTTAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR GCA 90 bp | GAAAACAGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTaGCTGGCAGCGCTGAGTAGAATTCCAACTGTCCCCACACCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: ENRPLRTLRVLRPAA*LAALSRIPTVPTPG Trigger: TCCTGGTGTGGGGACAGTTGGAATTCTACTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCTGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR TCA 90 bp | CATCCAGACACTTTATTAGAATCGTTAACATGGTCACAAGCAGCCTaGTTCATCCTTAAGCATGACAACTCGCTTAAGGCCCTGGCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: HPDTLLESLTWSQAA*FILKHDNSLKALAH Trigger: GTGGGCCAGGGCCTTAAGCGAGTTGTCATGCTTAAGGATGAATCAGGCTGCTTGTGACCATGTTAACGATTCTAATAAAGTGTCTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCATGCTACTGAGTCTGTaGCCCGAGGCTTTCGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VYIHSLLPPGLGPAPKASMLLSL*PEAFGL Trigger: CAGGCCGAAAGCCTCGGGTCACAGACTCAGTAGCAT...GGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGGCCCCCAAGGGACATaGGACCTATTGTGGTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: CTYTASSHRGWDLHLRPPGPQGT*DLLWSG Trigger: CCCTGACCACAATAGGTCCCATGTCCCTTGGGGGCC...TGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTAACTCCTACATGGGACCTATTGTaGTCAGGGTGGTGCTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: SHRGWDLHLRPPAESLTPTWDLL*SGWCCI Trigger: GATGCAGCACCACCCTGACCACAATAGGTCCCATGT...AGGAGTTAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR TCA 90 bp | CGTGAGGGAGAAAACAGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTCAGCCTCCGAGGCCGTaGGCCAGTCATTTTGGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: REGENRPLRTLRVLRPAAQPPRP*ASHFGH Trigger: ATGGCCAAAATGACTGGCTCACGGCCTCGGAGGCTG...AGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCTGTTTTCTCCCTCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGAGTAGAATTCCAACTCAGCCTCCGAGGCCGTaGGCCAGTCATTTTGGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LRVLRPAACLAALSRIPTQPPRP*ASHFGH Trigger: ATGGCCAAAATGACTGGCTCACGGCCTCGGAGGCTG...AGTTGGAATTCTACTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGACATGGGACCTATTGTaGTCAGGGTGGTGCTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: RPLRTLRVLRPAACLAALTWDLL*SGWCCI Trigger: GATGCAGCACCACCCTGACCACAATAGGTCCCATGT...CAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGAGTAGAATTCCAACTGGCCCCCAAGGGACATaGGACCTATTGTGGTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LRVLRPAACLAALSRIPTGPQGT*DLLWSG Trigger: CCCTGACCACAATAGGTCCCATGTCCCTTGGGGGCC...AGTTGGAATTCTACTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR TCA 90 bp | CGTGAGGGAGAAAACAGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTAGAGTCCCTAACTCCTaGGCAACCCTACCCCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: REGENRPLRTLRVLRPAARVPNS*ATLPQE Trigger: TTCTTGGGGTAGGGTTGCTCAGGAGTTAGGGACTCT...AGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCTGTTTTCTCCCTCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGAGTAGAATTCCAACTACATGGGACCTATTGTaGTCAGGGTGGTGCTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: LRVLRPAACLAALSRIPTTWDLL*SGWCCI Trigger: GATGCAGCACCACCCTGACCACAATAGGTCCCATGT...AGTTGGAATTCTACTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR TCA 90 bp | ACCCCCAAGAGACATCCAGACACTTTATTAGAATCGTTAACATGGTCACAAGCAATGCTACTGAGTCTGTaGCCCGAGGCTTTCGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TPKRHPDTLLESLTWSQAMLLSL*PEAFGL Trigger: CAGGCCGAAAGCCTCGGGTCACAGACTCAGTAGCAT...TGCTTGTGACCATGTTAACGATTCTAATAAAGTGTCTGGATGTCTCTTGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR TCA 72 bp | AAGGCCCTGGCCCACGTGAGGGAGAAAACAGACCTCTaGGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KALAHVREKTDL*EPSGFSVQLLA Trigger: GGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCTGTTTTCTCCCTCACGTGGGCCAGGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR TCA 72 bp | TCCTTGCCCATGGGTATACATCAGCCTCCGAGGCCGTaGGCCAGTCATTTTGGCCATCCACGCTCCCGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLPMGIHQPPRP*ASHFGHPRSRQ Trigger: TTGGCGGGAGCGTGGATGGCCAAAATGACTGGCTCACGGCCTCGGAGGCTGATGTATACCCATGGGCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR GCA 72 bp | CCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTaGCTGGCAGCGCTGAGTAGAATTCCAACTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PLRTLRVLRPAA*LAALSRIPTVP Trigger: GGGGACAGTTGGAATTCTACTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR CCA 72 bp | ATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTaGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: MKCTYTASSHRG*DLHLRPPAESL Trigger: TAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGCAAGAAGTCACCTCCTaGCCCATGGGTATACATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPLRTLRVLRPAACLAALQEVTS*PMGIHQ Trigger: CTGATGTATACCCATGGGCAAGGAGGTGACTTCTTG...CAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR GCA 72 bp | ACTCCTGAGCAACCCTACCCCAAGAAGTCACCTCCTTaGCCATGGGTATACATCAGCCTCCGAGGCCGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TPEQPYPKKSPP*PWVYISLRGRE Trigger: CTCACGGCCTCGGAGGCTGATGTATACCCATGGGCAAGGAGGTGACTTCTTGGGGTAGGGTTGCTCAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR TCA 72 bp | TCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTaGGTAGAATTCCAACTGTCCCCACACCAGGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: SGFSVQLLAWQR*VEFQLSPHQEF Trigger: AAATTCCTGGTGTGGGGACAGTTGGAATTCTACTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGAGTAGAATTCCAACTCAAGAAGTCACCTCCTaGCCCATGGGTATACATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRVLRPAACLAALSRIPTQEVTS*PMGIHQ Trigger: CTGATGTATACCCATGGGCAAGGAGGTGACTTCTTG...AGTTGGAATTCTACTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR TCA 72 bp | TTGTTTGTAAACAGTCTTGCCCAAGTTAAAAACCAATaGAGTGTACATACACAGCCTCCTCCCACCGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LFVNSLAQVKNQ*SVHTQPPPTGA Trigger: AGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATTGGTTTTTAACTTGGGCAAGACTGTTTACAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| 3UTR TCA 72 bp | ACTTTATTAGAATCGTTAACATGGTCACAAGCAGCCTaGTTCATCCTTAAGCATGACAACTCGCTTAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TLLESLTWSQAA*FILKHDNSLKA Trigger: GGCCTTAAGCGAGTTGTCATGCTTAAGGATGAATCAGGCTGCTTGTGACCATGTTAACGATTCTAATAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAAGTCATGCTCGGGCTaGGGGCTGCGGCCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VYIHSLLPPGLGPAPKASKSCSG*GLRPSR Trigger: CCGGGATGGCCGCAGCCCTCAGCCCGAGCATGACTT...GGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | TCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTAACTCCTTCAGCCCCGGGTTCCTaGGCCTTCCAGGGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHRGWDLHLRPPAESLTPSAPGS*AFQGKV Trigger: CACCTTCCCCTGGAAGGCTCAGGAACCCGGGGCTGA...AGGAGTTAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS-3UTR TCA 90 bp | AGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGAAGTCATGCTCGGGCTaGGGGCTGCGGCCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPLRTLRVLRPAACLAALKSCSG*GLRPSR Trigger: CCGGGATGGCCGCAGCCCTCAGCCCGAGCATGACTT...CAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | CTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTAACTCCACCCGGGGAGCATTCTaGGAAGACATCTCAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPPGLGPAPKASSRVPNSTRGAF*EDISAP Trigger: CGGGGCTGAGATGTCTTCTCAGAATGCTCCCCGGGT...GGAGTTAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTAACTCCAGAGAAAGGCTGCCATaGAGCCGTGGACCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPGLGPAPKASSRVPNSRERLP*SRGPAA Trigger: TGCTGCAGGTCCACGGCTTCATGGCAGCCTTTCTCT...GGAGTTAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTAACTCCCAAGGGCAGCGCTGCTaGCCTGCAGTCTGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPGLGPAPKASSRVPNSQGQRC*PAVCQS Trigger: ACTTTGACAGACTGCAGGCCAGCAGCGCTGCCCTTG...GGAGTTAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGGCCAGAGAGAAGATaGGCAGCATGTAGCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VYIHSLLPPGLGPAPKASRPERR*AACSAS Trigger: GCTGGCGCTACATGCTGCTCATCTTCTCTCTGGCCT...GGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | AATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGAAGTCATGCTCGGGCTaGGGGCTGCGGCCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NEVYIHSLLPPGLGPAPKKSCSG*GLRPSR Trigger: CCGGGATGGCCGCAGCCCTCAGCCCGAGCATGACTT...CTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | AGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGGGAGCCAGGCTTGTGTaGCCTAGAGGCCTTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPLRTLRVLRPAACLAALGARLV*PRGLEG Trigger: TCCCTCAAGGCCTCTAGGCCACACAAGCCTGGCTCC...CAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS-3UTR CCA 90 bp | CGTGAGGGAGAAAACAGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTGGGTCTGGTGGACCCTaGCCTGCCCCCAGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: REGENRPLRTLRVLRPAAGSGGP*PAPRLT Trigger: AGTCAGCCTGGGGGCAGGCCAGGGTCCACCAGACCC...AGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCTGTTTTCTCCCTCACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS-3UTR TCA 90 bp | TGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAAGGCCAGAGAGAAGATaGGCAGCATGTAGCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTYTASSHRGWDLHLRPPRPERR*AACSAS Trigger: GCTGGCGCTACATGCTGCTCATCTTCTCTCTGGCCT...TGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCCCACGGCATTATGGCTaGAAAGCAGAGTCTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VYIHSLLPPGLGPAPKASPRHYG*KAESVR Trigger: GCGCACAGACTCTGCTTTTCAGCCATAATGCCGTGG...GGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | GAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCCCTTCCAGGGGAAGGTaGCCAAGGTTGGGGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVYIHSLLPPGLGPAPKAPSRGR*PRLGYS Trigger: TGAGTACCCCAACCTTGGCCACCTTCCCCTGGAAGG...GGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGAGGGCGGGGGCACTTCATaGGCTTGTTTAGCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSENPQGSPSSCLPGSAEGGGTS*ACLAEA Trigger: AGCCTCAGCTAAACAAGCCCATGAAGTGCCCCCGCC...CTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTAACTCCTGCCAAACAGTGGGCTaGCCTCATCAATCTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPGLGPAPKASSRVPNSCQTVG*PHQSRA Trigger: TGCACGAGATTGATGAGGCCAGCCCACTGTTTGGCA...GGAGTTAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | AGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGCCACGGCATTATGGCTaGAAAGCAGAGTCTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLRTLRVLRPAACLAALPRHYG*KAESVR Trigger: GCGCACAGACTCTGCTTTTCAGCCATAATGCCGTGG...CAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | GAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCCCACGGCATTATGGCTaGAAAGCAGAGTCTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EVYIHSLLPPGLGPAPKAPRHYG*KAESVR Trigger: GCGCACAGACTCTGCTTTTCAGCCATAATGCCGTGG...GGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | CCGAGGCTTTCGGCCTGCTCTGCTCAAACGCAGGCCCCCAAGGGACATGGGACCTGGTCTGTGTCTCAATaGAGAAGAGAAAGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRLSACSAQTQAPKGHGTWSVSQ*RRERLP Trigger: TGGCAGCCTTTCTCTTCTCCATTGAGACACAGACCA...GGTCCCATGTCCCTTGGGGGCCTGCGTTTGAGCAGAGCAGGCCGAAAGCCTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | TGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCATGCCAAACAGTGGGCTaGCCTCATCAATCTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTYTASSHRGWDLHLRPPCQTVG*PHQSRA Trigger: TGCACGAGATTGATGAGGCCAGCCCACTGTTTGGCA...TGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | AATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGAGAGAAAGGCTGCCATaGAGCCGTGGACCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NEVYIHSLLPPGLGPAPKRERLP*SRGPAA Trigger: TGCTGCAGGTCCACGGCTTCATGGCAGCCTTTCTCT...CTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | GAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCTGTCTCAAGGTCCTaGCGGCTAATGCCAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVYIHSLLPPGLGPAPKASVSRS*RLMPNS Trigger: ACTGTTTGGCATTAGCCGTCAGGACCTTGAGACAGA...GGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGAGTCTGTCTCAAGGTCCTaGCGGCTAATGCCAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSENPQGSPSSCLPGSAESVSRS*RLMPNS Trigger: ACTGTTTGGCATTAGCCGTCAGGACCTTGAGACAGA...CTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | GAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGCCGCTAATGCCAAACAGTaGGCTGGCCTCATCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVYIHSLLPPGLGPAPKAANAKQ*AGLINL Trigger: GAGATTGATGAGGCCAGCCCACTGTTTGGCATTAGC...GGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTGCCTGGCAGCGCTGAGGCTAATGCCAAACAGTaGGCTGGCCTCATCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSENPQGSPSSCLPGSAEANAKQ*AGLINL Trigger: GAGATTGATGAGGCCAGCCCACTGTTTGGCATTAGC...CTCAGCGCTGCCAGGCAAGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | AATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGCAAGGGCAGCGCTGCTaGCCTGCAGTCTGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NEVYIHSLLPPGLGPAPKQGQRC*PAVCQS Trigger: ACTTTGACAGACTGCAGGCCAGCAGCGCTGCCCTTG...CTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCGGCCTGCTCTGCTCAAACGCAGGCCCCCAAGGGACATGGGACCTATTGTTGCCAAACAGTGGGCTaGCCTCATCAATCTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSACSAQTQAPKGHGTYCCQTVG*PHQSRA Trigger: TGCACGAGATTGATGAGGCCAGCCCACTGTTTGGCA...ACAATAGGTCCCATGTCCCTTGGGGGCCTGCGTTTGAGCAGAGCAGGCCGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | ACCCCCAAGAGACATCCAGACACTTTATTAGAATCGTTAACATGGTCACAAGCACAGGAGGCAGAGGGTTaGCGGGGCTGGGGAACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPKRHPDTLLESLTWSQAQEAEG*RGWGTR Trigger: CCGGGTTCCCCAGCCCCGTCAACCCTCTGCCTCCTG...TGCTTGTGACCATGTTAACGATTCTAATAAAGTGTCTGGATGTCTCTTGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS-3UTR GCA 90 bp | AATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGGCTGTAATGGTGGATaGTGTTTCTGTCTAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NEVYIHSLLPPGLGPAPKGCNGG*CFCLGQ Trigger: CTGGCCTAGACAGAAACAGCATCCACCATTACAGCC...CTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS-3UTR CCA 90 bp | CGTGAGGGAGAAAACAGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTGCTAATGCCAAACAGTaGGCTGGCCTCATCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: REGENRPLRTLRVLRPAAANAKQ*AGLINL Trigger: GAGATTGATGAGGCCAGCCCACTGTTTGGCATTAGC...AGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCTGTTTTCTCCCTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR TCA 90 bp | AAGTTAAAAACCAATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGAAGAGAAAGGCTGCCATaGAGCCGTGGACCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKTNEVYIHSLLPPGLGRERLP*SRGPAA Trigger: TGCTGCAGGTCCACGGCTTCATGGCAGCCTTTCTCT...TCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATTGGTTTTTAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CCA 90 bp | AAGTTAAAAACCAATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACAAGGGCAGCGCTGCTaGCCTGCAGTCTGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKTNEVYIHSLLPPGLGQGQRC*PAVCQS Trigger: ACTTTGACAGACTGCAGGCCAGCAGCGCTGCCCTTG...TCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATTGGTTTTTAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CAA 90 bp | TCCCACCGGGGCTGGGACCTGCACCTAAGGCCTCCAGCAGAGTCCCTAACTCCTGTATGCACCTTGCCATaGCCAAAACCGTTGGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHRGWDLHLRPPAESLTPVCTLP*PKPLAP Trigger: AGGCGCCAACGGTTTTGGCAATGGCAAGGTGCATAC...AGGAGTTAGGGACTCTGCTGGAGGCCTTAGGTGCAGGTCCCAGCCCCGGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CAA 90 bp | CTTTCGGCCTGCTCTGCTCAAACGCAGGCCCCCAAGGGACATGGGACCTATTGTTCTGTGACCCTGGGCTaGATGAGCTGGGCCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSACSAQTQAPKGHGTYCSVTLG*MSWART Trigger: TGTGCGGGCCCAGCTCATCAAGCCCAGGGTCACAGA...ACAATAGGTCCCATGTCCCTTGGGGGCCTGCGTTTGAGCAGAGCAGGCCGAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CAA 90 bp | CGTGAGGGAGAAAACAGACCTCTGAGAACCCTCAGGGTTCTCCGTCCAGCTGCTTCTGTGACCCTGGGCTaGATGAGCTGGGCCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: REGENRPLRTLRVLRPAASVTLG*MSWART Trigger: TGTGCGGGCCCAGCTCATCAAGCCCAGGGTCACAGA...AGCAGCTGGACGGAGAACCCTGAGGGTTCTCAGAGGTCTGTTTTCTCCCTCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CAA 90 bp | AATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGACCTGCACCTAAGGTATGCACCTTGCCATaGCCAAAACCGTTGGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NEVYIHSLLPPGLGPAPKVCTLP*PKPLAP Trigger: AGGCGCCAACGGTTTTGGCAATGGCAAGGTGCATAC...CTTAGGTGCAGGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041944.9 ENSMUST00000089184.11 ENSMUST00000108717.3 |
||
| CDS-3UTR CAA 90 bp | AAGTTAAAAACCAATGAAGTGTACATACACAGCCTCCTCCCACCGGGGCTGGGATCCCAGGAGCCAGGCTaGTGTGGCCTAGAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KLKTNEVYIHSLLPPGLGSQEPG*CGLEAL Trigger: CAAGGCCTCTAGGCCACACAAGCCTGGCTCCTGGGA...TCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATTGGTTTTTAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||
| CDS CCA 72 bp | GGCGGGGGCACTTCATGGGCTTGTTTAGCTGAGGCTTaGGGCTGTAATGGTGGATGCTGTTTCTGTCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGTSWACLAEA*GCNGGCCFCLG Trigger: GCCTAGACAGAAACAGCATCCACCATTACAGCCCCAAGCCTCAGCTAAACAAGCCCATGAAGTGCCCCCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041944.9 |
||