Pregenerated sensors for KCNJ10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044708Ensembl transcript IDs: ENSMUST00000056136.4
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTCTCTCACATTGTTATCCAAGATTCTGAGGAGAGTTGGGCCTTaGCAAGGCTCTGGGACGAGGGTCATTCCCTCAGAAGGGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: CSLTLLSKILRRVGP*QGSGTRVIPSEGKQ Trigger: CTGCTTCCCTTCTGAGGGAATGACCCTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCTCAGAATCTTGGATAACAATGTGAGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CCA 90 bp | CAGGAAATGCTCTCTCACATTGTTATCCAAGATTCTGAGGAGAGTTaGGCCTTGGCAAGGCTCTGGGACGAGGGTCATTCCCTCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: QEMLSHIVIQDSEES*ALARLWDEGHSLRR Trigger: CCTTCTGAGGGAATGACCCTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCTCAGAATCTTGGATAACAATGTGAGAGAGCATTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CCA 90 bp | TTTCTTTTTCTGCTGACCTCAGGGAAATCCCTGCATAGTGCTAGCTaGTGTGGGTTTCAGAGAGTGGGAGGAACAGTAGGGAGCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: FLFLLTSGKSLHSAS*CGFQRVGGTVGSSQ Trigger: CTGGCTGCTCCCTACTGTTCCTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCCCTGAGGTCAGCAGAAAAAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | CAGGTCAGAGAGTCGGGCTGGGATCTAAAGAACCACTTAGGGTTGTaGGTGGGAGTTGTTCTGCAGAACATAAGGCTTGTTGGAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: QVRESGWDLKNHLGL*VGVVLQNIRLVGER Trigger: CCTTTCTCCAACAAGCCTTATGTTCTGCAGAACAACTCCCACTCACAACCCTAAGTGGTTCTTTAGATCCCAGCCCGACTCTCTGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | AAACATCACAAATTCCCCGAGGCTCTGTACAGCAATCTGGAAATCTaGGAAGTGGGTTCAGCTTTCCTGGGGAATCTGTGCCCTGTGACT | + |
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Preference number: 1 (lower is better) Translates to: KHHKFPEALYSNLEI*EVGSAFLGNLCPVT Trigger: AGTCACAGGGCACAGATTCCCCAGGAAAGCTGAACCCACTTCTCAGATTTCCAGATTGCTGTACAGAGCCTCGGGGAATTTGTGATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | TGTCCCTGGCTAATAGCCACATTACGACTGCTTTTCTTTTTCTGCTaGCCTCAGGGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: CPWLIATLRLLFFFC*PQGNPCIVLAGVGF Trigger: GAAACCCACACCAGCTAGCACTATGCAGGGATTTCCCTGAGGTCAGCAGAAAAAGAAAAGCAGTCGTAATGTGGCTATTAGCCAGGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR GCA 90 bp | GATCTTCTGAGTTTCTCTGCAAGGCTTTGCCCAGAGATCCGGGCATaGATTCTGTATAGATGTGTCGCTTGTCATCTGTCAAGTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: DLLSFSARLCPEIRA*ILYRCVACHLSSPP Trigger: AGGTGGACTTGACAGATGACAAGCGACACATCTATACAGAATGCATGCCCGGATCTCTGGGCAAAGCCTTGCAGAGAAACTCAGAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | GCCTTTAATCCCAGTATATGGGAGACGGAGGCAGCTAGGTATCTGTaGGTTCAAGGCCAGCCTAGTCTACATAGTAAATTCAAGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: AFNPSIWETEAARYL*VQGQPSLHSKFKDS Trigger: GCTGTCCTTGAATTTACTATGTAGACTAGGCTGGCCTTGAACTCACAGATACCTAGCTGCCTCCGTCTCCCATATACTGGGATTAAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | CATTTTTCATCAGCCGTGGCTGTTAGTAAAGCTTGCCCTGCATCCTaGGAAAGGATTTCAGGTCAGAGAGTCGGGCTGGGATCTAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: HFSSAVAVSKACPAS*ERISGQRVGLGSKE Trigger: TTCTTTAGATCCCAGCCCGACTCTCTGACCTGAAATCCTTTCTCAGGATGCAGGGCAAGCTTTACTAACAGCCACGGCTGATGAAAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | AGTACCCTCTTTAGGATTTCTCTATATAGGCTTGGGCCTCTGCCTTaGGAGTATCTTGAGCTCAACAGCTCATCAGTCCTAGGGCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: STLFRISLYRLGPLP*EYLELNSSSVLGLA Trigger: TGCAAGCCCTAGGACTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATAGAGAAATCCTAAAGAGGGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | CTGCCCAAAGGACAGGGCCAGAGTATTAGACAGTATTTCCAAAATTaGATTTCTCAGAATCCAGGATGGGTGCAGGAAAGGTGGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LPKGQGQSIRQYFQN*ISQNPGWVQERWLL Trigger: AAGCAGCCACCTTTCCTGCACCCATCCTGGATTCTGAGAAATTCAATTTTGGAAATACTGTCTAATACTCTGGCCCTGTCCTTTGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | CTGCCAGCACAATTCATCAAACCTCGACGGATGCTCCTTTATTTATaGAAAGGGCAGGGTCTAGCCCTCCCTTTTCCATCAAGCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: LPAQFIKPRRMLLYL*KGQGLALPFPSSKL Trigger: AAGTTTGCTTGATGGAAAAGGGAGGGCTAGACCCTGCCCTTTTCATAAATAAAGGAGCATCCGTCGAGGTTTGATGAATTGTGCTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR GCA 90 bp | TGGAGCATCCCTGTGTCCCATTTCCTCCTAGTTTTCCTCTTGTCCTaGCAGCACAATTCATCAAACCTCGACGGATGCTCCTTTATTTAT | + |
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Preference number: 1 (lower is better) Translates to: WSIPVSHFLLVFLLS*QHNSSNLDGCSFIY Trigger: ATAAATAAAGGAGCATCCGTCGAGGTTTGATGAATTGTGCTGGCAGGACAAGAGGAAAACTAGGAGGAAATGGGACACAGGGATGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR GCA 90 bp | CCATCTTGGTGGAAGAAGAGAGGAAAATGGAAGGATGCTTTTGTTTaGTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: PSWWKKRGKWKDAFV*SLARSLTCSLACLF Trigger: AAACAAGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCTTCCATTTTCCTCTCTTCTTCCACCAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CCA 90 bp | GTTTCAGACATTCAGGTTCTTCTGGTTCTGGTTGTTGATGAGAGTTaGAGGCTAACGGTGAGCTTTACAGTAAGGAGAGACCAAAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: VSDIQVLLVLVVDES*RLTVSFTVRRDQRL Trigger: GAGCCTTTGGTCTCTCCTTACTGTAAAGCTCACCGTTAGCCTCCAACTCTCATCAACAACCAGAACCAGAAGAACCTGAATGTCTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR GCA 90 bp | AAAATTGAATTTCTCAGAATCCAGGATGGGTGCAGGAAAGGTGGCTaGTTGTGTTTCTCGAGTCAACCCCAGTTCTACAGAAACAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: KIEFLRIQDGCRKGG*LCFSSQPQFYRNRS Trigger: GCTTCTGTTTCTGTAGAACTGGGGTTGACTCGAGAAACACAAGCAGCCACCTTTCCTGCACCCATCCTGGATTCTGAGAAATTCAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR GCA 90 bp | TTAGACAGTATTTCCAAAATTGAATTTCTCAGAATCCAGGATGGGTaGAGGAAAGGTGGCTGCTTGTGTTTCTCGAGTCAACCCCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: LDSISKIEFLRIQDG*RKGGCLCFSSQPQF Trigger: GAACTGGGGTTGACTCGAGAAACACAAGCAGCCACCTTTCCTGCACCCATCCTGGATTCTGAGAAATTCAATTTTGGAAATACTGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CCA 90 bp | TCTGTCAGGAGTTACCAGCTGAAATTAAAACACCATGACAAACTCTaGCTTCTTTCTTCAGGATTTGATAGCCCAGGGAAAACTGATTTC | + |
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Preference number: 1 (lower is better) Translates to: SVRSYQLKLKHHDKL*LLSSGFDSPGKTDF Trigger: GAAATCAGTTTTCCCTGGGCTATCAAATCCTGAAGAAAGAAGCCAGAGTTTGTCATGGTGTTTTAATTTCAGCTGGTAACTCCTGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR TCA 90 bp | TGCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTTGTTAAAGTCTaGATACTTCCTTCTGTACAGTCCGTATATTTGGGTATATGTACA | + |
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Preference number: 1 (lower is better) Translates to: CSPKPRQNICPFVKV*ILPSVQSVYLGICT Trigger: TGTACATATACCCAAATATACGGACTGTACAGAAGGAAGTATTCAGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGTTGTTCAGACCATAACACAGAAGATCCAGCTATCCTGCTCCCCCAAACCACCAGCAGGCCCCGACTaGTCACAGGCCACCGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: TVVQTITQKIQLSCSPKPPAGPD*SQATGL Trigger: TAGCCCGGTGGCCTGTGAGCAGTCGGGGCCTGCTGG...TGGTTTGGGGGAGCAGGATAGCTGGATCTTCTGTGTTATGGTCTGAACAACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACAGCAGTACACATGGTCCTTGCACACTGGACACCCTTCCATGACCCCTaGCACAACCCTCACCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTAVHMVLAHWTPFHDP*HNPHQR Trigger: TCTCTGGTGAGGGTTGTGGCAGGGGTCATGGAAGGG...TGTCCAGTGTGCAAGGACCATGTGTACTGCTGTGTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGACCTGGTGCTTCAAATaGCCTTCCATGACCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TAVHMVLAHWTHQVSAALTWCFK*PSMTPA Trigger: GGCAGGGGTCATGGAAGGGCATTTGAAGCACCAGGT...CAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTACTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | GTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGAATGTAGAAGTTGAGGGTGGGTaGTTCAGGGTCTCTCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: VHMVLAHWTHQVSAALNVEVEGG*FRVSPA Trigger: CGCTGGAGAGACCCTGAAGCACCCACCCTCAACTTC...TACATTCAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CAA 90 bp | ATGCTCTCTCACATTGTTATCCAAGATTCTGAGGAGAGTTGGGCCTaGGCAAGGCTCTGGGACGAGGGTCATTCCCTCAGAAGGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: MLSHIVIQDSEESWA*ARLWDEGHSLRREA Trigger: TGCTTCCCTTCTGAGGGAATGACCCTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCTCAGAATCTTGGATAACAATGTGAGAGAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGGGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGGCCTTGAGAGTATCTTaGGCTCAACAGCTCATCAGT | + |
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Preference number: 2 (lower is better) Translates to: PQGNPCIVLAGVGFREWEALRVS*AQQLIS Trigger: ACTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGC...CTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCCCTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGGGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGCCCCATTGGTCGTTTTaGTCACCTGAAATCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: PQGNPCIVLAGVGFREWEPHWSF*SPEISH Trigger: ATGGGAGATTTCAGGTGAGCAAAACGACCAATGGGG...CTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCCCTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGCAGCTAGGTATCTGTGAGTTCAAGGCCAGCCTAGTCTACATAGTAAATGGTACAAGGGGACAGTaGGAGGAAAAGGAAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: RRQLGICEFKASLVYIVNGTRGQ*EEKEGL Trigger: GAGCCCTTCCTTTTCCTCTCACTGTCCCCTTGTACC...ATTTACTATGTAGACTAGGCTGGCCTTGAACTCACAGATACCTAGCTGCCTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR TCA 90 bp | TCGACGGATGCTCCTTTATTTATGAAAAGGGCAGGGTCTAGCCCTCCCTTTTCCGCAGAGCCCATAGAGTaGCTCTCTGAGAGAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: STDAPLFMKRAGSSPPFSAEPIE*LSERVL Trigger: CAGAACTCTCTCAGAGAGTCACTCTATGGGCTCTGC...GGAAAAGGGAGGGCTAGACCCTGCCCTTTTCATAAATAAAGGAGCATCCGTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | ACATCACAAATTCCCCGAGGCTCTGTACAGCAATCTGGAAATCTGAGAAGTGGGATCTCCAAGCATGGCTaGGGCCTTCCAAGCCATGTC | + |
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Preference number: 2 (lower is better) Translates to: TSQIPRGSVQQSGNLRSGISKHG*GLPSHV Trigger: GACATGGCTTGGAAGGCCGCAGCCATGCTTGGAGAT...CCCACTTCTCAGATTTCCAGATTGCTGTACAGAGCCTCGGGGAATTTGTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | GTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGAATGTATTTTCAGGACAGAGCTaGCCAAAGGACAGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VHMVLAHWTHQVSAALNVFSGQS*PKDRAR Trigger: TCTGGCCCTGTCCTTTGGGCAGCTCTGTCCTGAAAA...TACATTCAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGTTGTTCAGACCATAACACAGAAGATCCAGCTATCCTGCTCCCCCAAACCAGTGAATCTCCAAGCATaGCTGCGGCCTTCCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TVVQTITQKIQLSCSPKPVNLQA*LRPSKP Trigger: TGGCTTGGAAGGCCGCAGCCATGCTTGGAGATTCAC...TGGTTTGGGGGAGCAGGATAGCTGGATCTTCTGTGTTATGGTCTGAACAACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGGGGTGGGAGAAAAGGAAGCAATGGAACTGGTACAGTGTAATCTGGATGTCTCAGAATCCAGGATaGGTGCAGGAAAGGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GLGWEKRKQWNWYSVIWMSQNPG*VQERWL Trigger: CAGCCACCTTTCCTGCACCCATCCTGGATTCTGAGA...CATCCAGATTACACTGTACCAGTTCCATTGCTTCCTTTTCTCCCACCCCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAAGCAGAATTCTGCATTTCCATCAAGAAGCCTTGTAGCCATCGCATTCAGGAGAGTTGGGCCTTaGCAAGGCTCTGGGACGAGG | + |
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Preference number: 2 (lower is better) Translates to: RGKQNSAFPSRSLVAIAFRRVGP*QGSGTR Trigger: CCTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCT...GAATGCGATGGCTACAAGGCTTCTTGATGGAAATGCAGAATTCTGCTTTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR TCA 90 bp | AGATCCTTCCCCATTGGTCGTTTTGCTCACCTGAAATCTCCCATCCCACTTAGACATAGAGTGACTCTCTaGGAGAGTTCTGCCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RSFPIGRFAHLKSPIPLRHRVTL*ESSASG Trigger: CCCTGAGGCAGAACTCTCTCAGAGAGTCACTCTATG...TCTAAGTGGGATGGGAGATTTCAGGTGAGCAAAACGACCAATGGGGAAGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR TCA 90 bp | AGGATGCTTTTGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTAACCACTTAGGGTTGTaGGTGGGAGTTGTTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RMLLFARLLDRLLAPLLANHLGL*VGVVLQ Trigger: CTGCAGAACAACTCCCACTCACAACCCTAAGTGGTT...AGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | CGGAGGCAGCTAGGTATCTGTGAGTTCAAGGCCAGCCTAGTCTACATAGTAAATAGAATCCAGGATGGGTaGAGGAAAGGTGGCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: RRQLGICEFKASLVYIVNRIQDG*RKGGCL Trigger: CAAGCAGCCACCTTTCCTGCACCCATCCTGGATTCT...ATTTACTATGTAGACTAGGCTGGCCTTGAACTCACAGATACCTAGCTGCCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR CCA 90 bp | TATATAGGCTTGGGCCTCTGCCTTGAGAGTATCTTGAGCTCAACAGCTCATCAGTGGGTGCAGGAAAGGTaGCTGCTTGTGTTTCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: YIGLGLCLESILSSTAHQWVQER*LLVFLE Trigger: CTCGAGAAACACAAGCAGCCACCTTTCCTGCACCCA...CTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGTGCCAGGTGTCAGAATaGCAGAGATCAGAATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: TAVHMVLAHWTHQVSAALCQVSE*QRSECK Trigger: CTTACATTCTGATCTCTGCCATTCTGACACCTGGCA...CAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTACTGCTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR CCA 90 bp | GGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGGAACAGCTACAGCTCCCATCTTaGTGGAAGAAGAGAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GNPCIVLAGVGFREWEEQLQLPS*WKKRGK Trigger: TTTTCCTCTCTTCTTCCACCAAGATGGGAGCTGTAG...CTGTTCCTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR TCA 90 bp | AGGATGCTTTTGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTGTCGTTTTGCTCACCTaGAATCTCCCATCCCACTTA | + |
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Preference number: 2 (lower is better) Translates to: RMLLFARLLDRLLAPLLAVVLLT*NLPSHL Trigger: TAAGTGGGATGGGAGATTTCAGGTGAGCAAAACGAC...AGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR GCA 90 bp | GGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGGAACAGGGACAGAGGATAAATTaGCACAGGATAAGAAGACAC | + |
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Preference number: 2 (lower is better) Translates to: GNPCIVLAGVGFREWEEQGQRIN*HRIRRH Trigger: GTGTCTTCTTATCCTGTGGCAATTTATCCTCTGTCC...CTGTTCCTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGAGATCCACTCAGTCTTaGGATCTTCTGAGTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: TAVHMVLAHWTHQVSAALRSTQS*DLLSFS Trigger: AGAGAAACTCAGAAGATCCCAAGACTGAGTGGATCT...CAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTACTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR-3UTR CCA 90 bp | AGGATGCTTTTGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTGAGATCCTTCCCCATTaGTCGTTTTGCTCACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: RMLLFARLLDRLLAPLLAEILPH*SFCSPE Trigger: TTCAGGTGAGCAAAACGACCAATGGGGAAGGATCTC...AGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CAA 90 bp | AAGACCAACGTAAAAAGACTGTGCACAGTTGAGATCCACTCAGTCTaGGGATCTTCTGAGTTTCTCTGCAAGGCTTTGCCCAGAGATCCG | + |
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Preference number: 2 (lower is better) Translates to: KTNVKRLCTVEIHSV*GSSEFLCKALPRDP Trigger: CGGATCTCTGGGCAAAGCCTTGCAGAGAAACTCAGAAGATCCCAAGACTGAGTGGATCTCAACTGTGCACAGTCTTTTTACGTTGGTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CAA 90 bp | CCCATCTTGGTGGAAGAAGAGAGGAAAATGGAAGGATGCTTTTGTTaGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: PILVEEERKMEGCFC*LACSIAYLLPCLLV Trigger: AACAAGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCTTCCATTTTCCTCTCTTCTTCCACCAAGATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CAA 90 bp | AGCAGCCAGAATGAAGTGAAGCCCAGGTTAGGGATTTCAGAAGCTTaGCATAGAACTGCATCAGCCTCTGGGGAAGAGGAAAGCAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: SSQNEVKPRLGISEA*HRTASASGEEESRI Trigger: AATTCTGCTTTCCTCTTCCCCAGAGGCTGATGCAGTTCTATGCAAAGCTTCTGAAATCCCTAACCTGGGCTTCACTTCATTCTGGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR TCA 90 bp | ACATCACAAATTCCCCGAGGCTCTGTACAGCAATCTGGAAATCTGAGAAGTGGGTTCAAGGACAGCCCATaGAAGAGAGAGAGAGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TSQIPRGSVQQSGNLRSGFKDSP*KRERER Trigger: TCTCTCTCTCTCTCTCTTTCATGGGCTGTCCTTGAA...CCCACTTCTCAGATTTCCAGATTGCTGTACAGAGCCTCGGGGAATTTGTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCTATCCTGCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTTGTTAAAGTCTCCTGCCAAACTACCTTaGGAGGTTTCCTGGGTACCC | + |
|
Preference number: 2 (lower is better) Translates to: SYPAPPNQGKIFVPLLKSPAKLP*EVSWVP Trigger: GGGTACCCAGGAAACCTCGCAAGGTAGTTTGGCAGG...AGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGCAGGATAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR GCA 90 bp | AGGATGCTTTTGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTTCTTCTGAGTTTCTCTaGAAGGCTTTGCCCAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RMLLFARLLDRLLAPLLASSEFL*KALPRD Trigger: ATCTCTGGGCAAAGCCTTGCAGAGAAACTCAGAAGA...AGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACAGCAGTACACATGGTCCTTGCACACTGGACACTCTTTCCCCCAAGCTaGCTTAAGAGTCATATACAT | + |
|
Preference number: 2 (lower is better) Translates to: HTHTHTHTAVHMVLAHWTLFPPS*LKSHIH Trigger: ATGTATATGACTCTTAAGCCAGCTTGGGGGAAAGAG...TGTCCAGTGTGCAAGGACCATGTGTACTGCTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTGGGGTGGGAGAAAAGGAAGCAATGGAACTGGTACAGTGTAATCTGGATGGATCCACTTGAGAACTaGAGAGGGAAAATTAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GLGWEKRKQWNWYSVIWMDPLEN*RGKIRW Trigger: CCACCTAATTTTCCCTCTCCAGTTCTCAAGTGGATC...CATCCAGATTACACTGTACCAGTTCCATTGCTTCCTTTTCTCCCACCCCAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCTATCCTGCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTTGTTAAAGTCTCCTTGCGAGGTTTCCTaGGTACCCAAGTGGAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SYPAPPNQGKIFVPLLKSPCEVS*VPKWSQ Trigger: TTGGCTCCACTTGGGTACCCAGGAAACCTCGCAAGG...AGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGCAGGATAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGGCAGCTAGGTATCTGTGAGTTCAAGGCCAGCCTAGTCTACATAGTAAATCTGAGAAGATCCACTTaGGAACTGGAGAGGGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RRQLGICEFKASLVYIVNLRRST*ELEREN Trigger: ATTTTCCCTCTCCAGTTCTCAAGTGGATCTTCTCAG...ATTTACTATGTAGACTAGGCTGGCCTTGAACTCACAGATACCTAGCTGCCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTCGGGCTGGGATCTAAAGAACCACTTAGGGTTGTGAGTGGGAGTTGTTCTGTTAAGAAAGGCAAATaGCCATGTTTCCCTCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: RVGLGSKEPLRVVSGSCSVKKGK*PCFPLL Trigger: TAAGAGAGGGAAACATGGTCATTTGCCTTTCTTAAC...AGAACAACTCCCACTCACAACCCTAAGTGGTTCTTTAGATCCCAGCCCGACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTCGGGCTGGGATCTAAAGAACCACTTAGGGTTGTGAGTGGGAGTTGTTCTAACGTAAAAAGACTGTaGACAGTTGAGATCCACTCA | + |
|
Preference number: 2 (lower is better) Translates to: RVGLGSKEPLRVVSGSCSNVKRL*TVEIHS Trigger: TGAGTGGATCTCAACTGTGCACAGTCTTTTTACGTT...AGAACAACTCCCACTCACAACCCTAAGTGGTTCTTTAGATCCCAGCCCGACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR GCA 90 bp | TATATAGGCTTGGGCCTCTGCCTTGAGAGTATCTTGAGCTCAACAGCTCATCAGAGGAAAATGGAAGGATaGTTTTGTTTGCTCGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: YIGLGLCLESILSSTAHQRKMEG*FCLLAC Trigger: GCAAGCGAGCAAACAAAAGCATCCTTCCATTTTCCT...CTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAACATCACAAATTCCCCGAGGCTCTGTACAGCAATCTGGAAATCTGAGAAGTCTTTTCCCAGAGCACTaGAAGAGGAAAAGGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KTSQIPRGSVQQSGNLRSLFPEH*KRKRPE Trigger: CTCTGGCCTTTTCCTCTTCCAGTGCTCTGGGAAAAG...ACTTCTCAGATTTCCAGATTGCTGTACAGAGCCTCGGGGAATTTGTGATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CCA 90 bp | GTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGAATGTAAAGAGTCATATACATTaGTGTAGTGGTAGAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VHMVLAHWTHQVSAALNVKSHIH*CSGRGR Trigger: CCTTCCTCTACCACTACACCAATGTATATGACTCTT...TACATTCAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCGGGCTGGGATCTAAAGAACCACTTAGGGTTGTGAGTGGGAGTTGTTCTCACCATGACAAACTCTaGCTTCTTTCTTCAGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: RVGLGSKEPLRVVSGSCSHHDKL*LLSSGF Trigger: AAATCCTGAAGAAAGAAGCCAGAGTTTGTCATGGTG...AGAACAACTCCCACTCACAACCCTAAGTGGTTCTTTAGATCCCAGCCCGACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGAAAGCAGAATTCTGCATTTCCATCAAGAAGCCTTGTAGCCATCGCATTCAAGGGCACCAGGAGATaGAACAAAATAGTGGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RGKQNSAFPSRSLVAIAFKGTRR*NKIVAV Trigger: GACAGCCACTATTTTGTTCCATCTCCTGGTGCCCTT...GAATGCGATGGCTACAAGGCTTCTTGATGGAAATGCAGAATTCTGCTTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCTATCCTGCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTTGTTAAAGTCTAGTACACATGGTCCTTaGACACTGGACACATCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SYPAPPNQGKIFVPLLKSSTHGP*TLDTSG Trigger: ACCTGATGTGTCCAGTGTGCAAGGACCATGTGTACT...AGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGCAGGATAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTTGTTCAGACCATAACACAGAAGATCCAGCTATCCTGCTCCCCCAAACCAGAGAAAAGGAAGCAATaGAACTGGTACAGTGTAATC | + |
|
Preference number: 2 (lower is better) Translates to: TVVQTITQKIQLSCSPKPEKRKQ*NWYSVI Trigger: GATTACACTGTACCAGTTCCATTGCTTCCTTTTCTC...TGGTTTGGGGGAGCAGGATAGCTGGATCTTCTGTGTTATGGTCTGAACAACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTCTTCCTATTCCCAGGAAACACTAAAACATATCTTTTCAGGACAGAGCTGTACAGAAACAGAAGCTaGGAGAGAACCGGCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KVFLFPGNTKTYLFRTELYRNRS*ERTGFA Trigger: AGCAAAGCCGGTTCTCTCTCAGCTTCTGTTTCTGTA...CAGCTCTGTCCTGAAAAGATATGTTTTAGTGTTTCCTGGGAATAGGAAGACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 90 bp | TCCAGCTATCCTGCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTaGTTAAAGTCTGAATACTTCCTTCTGTACAGTCCGTATATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SSYPAPPNQGKIFVP*LKSEYFLLYSPYIW Trigger: CCAAATATACGGACTGTACAGAAGGAAGTATTCAGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGCAGGATAGCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTTGTTAAAGTCTGAATACTTCGGAATCTGTGCCCTGTaGCTAGTTTTAATAGATCGA | + |
|
Preference number: 2 (lower is better) Translates to: APPNQGKIFVPLLKSEYFGICAL*LVLIDR Trigger: TCGATCTATTAAAACTAGTCACAGGGCACAGATTCC...GAAGTATTCAGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTTGTTAAAGTCTGAATACTTCGAAATTAAAACACCATaGCAAACTCTGGCTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: APPNQGKIFVPLLKSEYFEIKTP*QTLASF Trigger: GAAAGAAGCCAGAGTTTGTCATGGTGTTTTAATTTC...GAAGTATTCAGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGGAACAGGAGGAGAGTTGGGCCTaGGCAAGGCTCTGGGACGAG | + |
|
Preference number: 3 (lower is better) Translates to: GNPCIVLAGVGFREWEEQEESWA*ARLWDE Trigger: CTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCTC...CTGTTCCTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CCA 72 bp | CAAGATTCTGAGGAGAGTTGGGCCTTGGCAAGGCTCTaGGACGAGGGTCATTCCCTCAGAAGGGAAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QDSEESWALARL*DEGHSLRREAA Trigger: TGCTGCTTCCCTTCTGAGGGAATGACCCTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCTCAGAATCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | CAGGACCTGGTGCTTCAAATGCCCTTCCATGACCCCTaGCACAACCCTCACCAGAGAACTAGGAATGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QDLVLQMPFHDP*HNPHQRTRNGL Trigger: CAAGCCATTCCTAGTTCTCTGGTGAGGGTTGTGGCAGGGGTCATGGAAGGGCATTTGAAGCACCAGGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CCA 72 bp | CTGCTGACCTCAGGGAAATCCCTGCATAGTGCTAGCTaGTGTGGGTTTCAGAGAGTGGGAGGAACAGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLTSGKSLHSAS*CGFQRVGGTVG Trigger: CCCTACTGTTCCTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCCCTGAGGTCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACTAAAACATATCTTTTCAGGACAGAGCTGCCCAAAGGACAGGGCCAGAGTACGGGCTAAGGGGAAGTaGAGGGTGGGTGCTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TLKHIFSGQSCPKDRARVRAKGK*RVGASG Trigger: CCCTGAAGCACCCACCCTCAACTTCCCCTTAGCCCG...TACTCTGGCCCTGTCCTTTGGGCAGCTCTGTCCTGAAAAGATATGTTTTAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | CACCTTACAGCTTACGTCATTCCTGCCAAACTACCTTaGGAGGTTTCCTGGGTACCCAAGTGGAGCCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLTAYVIPAKLP*EVSWVPKWSQS Trigger: GCTTTGGCTCCACTTGGGTACCCAGGAAACCTCGCAAGGTAGTTTGGCAGGAATGACGTAAGCTGTAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CCA 72 bp | CTCTCTCACATTGTTATCCAAGATTCTGAGGAGAGTTaGGCCTTGGCAAGGCTCTGGGACGAGGGTCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSHIVIQDSEES*ALARLWDEGHS Trigger: GGAATGACCCTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCTCAGAATCTTGGATAACAATGTGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | GTACCCAAGTGGAGCCAAAGCTCACTAGGACAGGACCTGGTGCTTCAAATGCCCTTATTCAAGAGAACATaGGGGGCTTGGCATAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VPKWSQSSLGQDLVLQMPLFKRT*GAWHSG Trigger: ACCACTATGCCAAGCCCCCAATGTTCTCTTGAATAA...GGGCATTTGAAGCACCAGGTCCTGTCCTAGTGAGCTTTGGCTCCACTTGGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGGAACAGTTCTTCTGGTTCTGGTaGTTGATGAGAGTTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GNPCIVLAGVGFREWEEQFFWFW*LMRVGG Trigger: GCCTCCAACTCTCATCAACAACCAGAACCAGAAGAA...CTGTTCCTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | AGTACTTCTGAGGGCAGAGCCCATAGAGTGACTCTCTaGGAGAGTTCTGCCTCAGGGAACTTAGCTAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: STSEGRAHRVTL*ESSASGNLARW Trigger: CCATCTAGCTAAGTTCCCTGAGGCAGAACTCTCTCAGAGAGTCACTCTATGGGCTCTGCCCTCAGAAGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | TCTGGAGATCCTTCCCCATTGGTCGTTTTGCTCACCTaGAATCTCCCATCCCACTTAGAATTGGCGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGDPSPLVVLLT*NLPSHLELAHL Trigger: CAGGTGCGCCAATTCTAAGTGGGATGGGAGATTTCAGGTGAGCAAAACGACCAATGGGGAAGGATCTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | GAGATCCACTCAGTCTTGGGATCTTCTGAGTTTCTCTaGAAGGCTTTGCCCAGAGATCCGGGCATGCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: EIHSVLGSSEFL*KALPRDPGMHS Trigger: AGAATGCATGCCCGGATCTCTGGGCAAAGCCTTGCAGAGAAACTCAGAAGATCCCAAGACTGAGTGGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | ACACACACACACACACACAGCAGTACACATGGTCCTTaGACACTGGACACATCAGGTAAGCGCAGCGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHSSTHGP*TLDTSGKRSVE Trigger: TTCAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTACTGCTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CCA 72 bp | ACATTGTTATCCAAGATTCTGAGGAGAGTTGGGCCTTaGCAAGGCTCTGGGACGAGGGTCATTCCCTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLLSKILRRVGP*QGSGTRVIPSE Trigger: TTCTGAGGGAATGACCCTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCTCAGAATCTTGGATAACAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCTGGGGTGGGAGAAAAGGAAGCAATGGAACTGGTACAGTGTAATCTGGATAGGAAAGGTGGCTGCTaGTGTTTCTCGAGTCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: RSGVGEKEAMELVQCNLDRKGGC*CFSSQP Trigger: GGGTTGACTCGAGAAACACAAGCAGCCACCTTTCCT...ATCCAGATTACACTGTACCAGTTCCATTGCTTCCTTTTCTCCCACCCCAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGGAACAGCTTGCCTTCTGCTCTTaGTTTCAGACATTCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GNPCIVLAGVGFREWEEQLAFCS*FQTFRF Trigger: GAACCTGAATGTCTGAAACAAAGAGCAGAAGGCAAG...CTGTTCCTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | AAATTCCCCGAGGCTCTGTACAGCAATCTGGAAATCTaGGAAGTGGGTTCAGCTTTCCTGGGGAATCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KFPEALYSNLEI*EVGSAFLGNLC Trigger: GCACAGATTCCCCAGGAAAGCTGAACCCACTTCTCAGATTTCCAGATTGCTGTACAGAGCCTCGGGGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | TCAGAGAGTGGGAGGAACAGTAGGGAGCAGCCAGAATaGAGTGAAGCCCAGGTTAGGGATTTCAGAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SESGRNSREQPE*SEAQVRDFRSF Trigger: AAAGCTTCTGAAATCCCTAACCTGGGCTTCACTTCATTCTGGCTGCTCCCTACTGTTCCTCCCACTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | CGGAGGCAGCTAGGTATCTGTGAGTTCAAGGCCAGCCTAGTCTACATAGTAAATTCCAGCGAACCCAGATaGTATCCTTTTCCCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RRQLGICEFKASLVYIVNSSEPR*YPFPRA Trigger: TGCTCTGGGAAAAGGATACAATCTGGGTTCGCTGGA...ATTTACTATGTAGACTAGGCTGGCCTTGAACTCACAGATACCTAGCTGCCTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGATGCTTTTGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTGCTGAGAAGATCCACTaGAGAACTGGAGAGGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RMLLFARLLDRLLAPLLAAEKIH*RTGEGK Trigger: TTTTCCCTCTCCAGTTCTCAAGTGGATCTTCTCAGC...AGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | TATATAGGCTTGGGCCTCTGCCTTGAGAGTATCTTGAGCTCAACAGCTCATCAGCCTACAGCTCCCATCTaGGTGGAAGAAGAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: YIGLGLCLESILSSTAHQPTAPI*VEEERK Trigger: TTTCCTCTCTTCTTCCACCAAGATGGGAGCTGTAGG...CTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | CCCAGTATATGGGAGACGGAGGCAGCTAGGTATCTGTaGGTTCAAGGCCAGCCTAGTCTACATAGTAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: PSIWETEAARYL*VQGQPSLHSKF Trigger: GAATTTACTATGTAGACTAGGCTGGCCTTGAACTCACAGATACCTAGCTGCCTCCGTCTCCCATATACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | GAGTCGGGCTGGGATCTAAAGAACCACTTAGGGTTGTaGGTGGGAGTTGTTCTGCAGAACATAAGGCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ESGWDLKNHLGL*VGVVLQNIRLV Trigger: AACAAGCCTTATGTTCTGCAGAACAACTCCCACTCACAACCCTAAGTGGTTCTTTAGATCCCAGCCCGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | AGTTTCTCTGCAAGGCTTTGCCCAGAGATCCGGGCATaGATTCTGTATAGATGTGTCGCTTGTCATCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFSARLCPEIRA*ILYRCVACHLS Trigger: TGACAGATGACAAGCGACACATCTATACAGAATGCATGCCCGGATCTCTGGGCAAAGCCTTGCAGAGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | TGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTaGTTGCTTGTTTTAGAACTTGTTCAGCGGCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CLLACSIAYLLP*LLVLELVQRQV Trigger: AACCTGCCGCTGAACAAGTTCTAAAACAAGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CCA 72 bp | CTCTTTCCCCCAAGCTGGCTTAAGAGTCATATACATTaGTGTAGTGGTAGAGGAAGGTACAAGGGGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFPPSWLKSHIH*CSGRGRYKGTV Trigger: CACTGTCCCCTTGTACCTTCCTCTACCACTACACCAATGTATATGACTCTTAAGCCAGCTTGGGGGAAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CCA 72 bp | CACACACACACAGCAGTACACATGGTCCTTGCACACTaGACACATCAGGTAAGCGCAGCGTTGAATGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTAVHMVLAH*THQVSAALNVF Trigger: AAATACATTCAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTACTGCTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | GAGAGGAAAATGGAAGGATGCTTTTGTTTGCTCGCTTaGTCGATCGCTTACTTGCTCCCTTGCTTGCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ERKMEGCFCLLA*SIAYLLPCLLV Trigger: AACAAGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCTTCCATTTTCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | TGGAAGAAGAGAGGAAAATGGAAGGATGCTTTTGTTTaGTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: WKKRGKWKDAFV*SLARSLTCSLA Trigger: AGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCTTCCATTTTCCTCTCTTCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | CCCTCTTTAGGATTTCTCTATATAGGCTTGGGCCTCTaGCTTGAGAGTATCTTGAGCTCAACAGCTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSLGFLYIGLGL*LESILSSTAHQ Trigger: CTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATAGAGAAATCCTAAAGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | CAGCCTAGTCTACATAGTAAATTCAAGGACAGCCCATaGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QPSLHSKFKDSP*KRERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCATGGGCTGTCCTTGAATTTACTATGTAGACTAGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | CAATTCATCAAACCTCGACGGATGCTCCTTTATTTATaGAAAGGGCAGGGTCTAGCCCTCCCTTTTCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: QFIKPRRMLLYL*KGQGLALPFPS Trigger: TGATGGAAAAGGGAGGGCTAGACCCTGCCCTTTTCATAAATAAAGGAGCATCCGTCGAGGTTTGATGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | CTAATAGCCACATTACGACTGCTTTTCTTTTTCTGCTaGCCTCAGGGAAATCCCTGCATAGTGCTAGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LIATLRLLFFFC*PQGNPCIVLAG Trigger: ACCAGCTAGCACTATGCAGGGATTTCCCTGAGGTCAGCAGAAAAAGAAAAGCAGTCGTAATGTGGCTATTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CCA 72 bp | ATTCAGGTTCTTCTGGTTCTGGTTGTTGATGAGAGTTaGAGGCTAACGGTGAGCTTTACAGTAAGGAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IQVLLVLVVDES*RLTVSFTVRRD Trigger: GTCTCTCCTTACTGTAAAGCTCACCGTTAGCCTCCAACTCTCATCAACAACCAGAACCAGAAGAACCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | GGACAGGGCCAGAGTATTAGACAGTATTTCCAAAATTaGATTTCTCAGAATCCAGGATGGGTGCAGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GQGQSIRQYFQN*ISQNPGWVQER Trigger: CCTTTCCTGCACCCATCCTGGATTCTGAGAAATTCAATTTTGGAAATACTGTCTAATACTCTGGCCCTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | TTTAGGATTTCTCTATATAGGCTTGGGCCTCTGCCTTaGGAGTATCTTGAGCTCAACAGCTCATCAGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: FRISLYRLGPLP*EYLELNSSSVL Trigger: TAGGACTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATAGAGAAATCCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CCA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATTaGTTAAGGTCTTCCTATTCCCAGGAAACACTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EREREREREREH*LRSSYSQETLK Trigger: TTTTAGTGTTTCCTGGGAATAGGAAGACCTTAACCAATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | AGACCAAAGGCTCTTCGTTTTCAGGCTACAGTTAATTaGGTTCAAGGGAAGACCAACGTAAAAAGACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RPKALRFQATVN*VQGKTNVKRLC Trigger: GCACAGTCTTTTTACGTTGGTCTTCCCTTGAACTCAATTAACTGTAGCCTGAAAACGAAGAGCCTTTGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | ATTTCCAAAATTGAATTTCTCAGAATCCAGGATGGGTaGAGGAAAGGTGGCTGCTTGTGTTTCTCGAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ISKIEFLRIQDG*RKGGCLCFSSQ Trigger: TTGACTCGAGAAACACAAGCAGCCACCTTTCCTGCACCCATCCTGGATTCTGAGAAATTCAATTTTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | CAGGAAACACTAAAACATATCTTTTCAGGACAGAGCTaGCCAAAGGACAGGGCCAGAGTATTAGACAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: QETLKHIFSGQS*PKDRARVLDSI Trigger: AATACTGTCTAATACTCTGGCCCTGTCCTTTGGGCAGCTCTGTCCTGAAAAGATATGTTTTAGTGTTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | GAGATGGAACAAAATAGTGGCTGTCAGCCAGAGTTCTaGCTCAGCCCAAACCATAACAAAACATCACAAATT | + |
|
Preference number: 3 (lower is better) Translates to: EMEQNSGCQPEF*LSPNHNKTSQI Trigger: AATTTGTGATGTTTTGTTATGGTTTGGGCTGAGGCAGAACTCTGGCTGACAGCCACTATTTTGTTCCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR GCA 72 bp | CAGCAATGTGAAGAAGAAACAGGACAGAGGATAAATTaGCACAGGATAAGAAGACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: QQCEEETGQRIN*HRIRRHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTCTTCTTATCCTGTGGCAATTTATCCTCTGTCCTGTTTCTTCTTCACATTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAACATCACAAATTCCCCGAGGCTCTGTACAGCAATCTGGAAATCTGAGAAGTTTCTTTCTTCAGGATTaGATAGCCCAGGGAAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: KTSQIPRGSVQQSGNLRSFFLQD*IAQGKL Trigger: CAGTTTTCCCTGGGCTATCAAATCCTGAAGAAAGAA...ACTTCTCAGATTTCCAGATTGCTGTACAGAGCCTCGGGGAATTTGTGATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR TCA 72 bp | AAACCAAGGCAAAATATTTGTCCCTTTGTTAAAGTCTaGATACTTCCTTCTGTACAGTCCGTATATTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KPRQNICPFVKV*ILPSVQSVYLG Trigger: ACCCAAATATACGGACTGTACAGAAGGAAGTATTCAGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | CCCCGACTGCTCACAGGCCACCGGGCTAAGGGGAAGTaGAGGGTGGGTGCTTCAGGGTCTCTCCAGCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PRLLTGHRAKGK*RVGASGSLQRT Trigger: GGTTCGCTGGAGAGACCCTGAAGCACCCACCCTCAACTTCCCCTTAGCCCGGTGGCCTGTGAGCAGTCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR TCA 90 bp | TCGACGGATGCTCCTTTATTTATGAAAAGGGCAGGGTCTAGCCCTCCCTTTTCCAGAGGAAGGCTCCGGTaGGCGTGTGCACCTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: STDAPLFMKRAGSSPPFSRGRLR*ACAPAP Trigger: TGGTGCAGGTGCACACGCTCACCGGAGCCTTCCTCT...GGAAAAGGGAGGGCTAGACCCTGCCCTTTTCATAAATAAAGGAGCATCCGTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGGGTGGGAGAAAAGGAAGCAATGGAACTGGTACAGTGTAATCTGGATGGTGAGCGTGTGCACCTaGACCACACAAGGCGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGWEKRKQWNWYSVIWMVSVCT*TTQGVW Trigger: CCACACGCCTTGTGTGGTGCAGGTGCACACGCTCAC...CATCCAGATTACACTGTACCAGTTCCATTGCTTCCTTTTCTCCCACCCCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | GGGTGGGTGCTTCAGGGTCTCTCCAGCGAACCCAGATaGTATCCTTTTCCCAGAGCACTGGAAGAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GWVLQGLSSEPR*YPFPRALEEEK Trigger: CTTTTCCTCTTCCAGTGCTCTGGGAAAAGGATACAATCTGGGTTCGCTGGAGAGACCCTGAAGCACCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGAGTTTGCCTGTCACCTaGCATCCAATGAGGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PQGNPCIVLAGVGFREWESLPVT*HPMRRL Trigger: GAGTCTCCTCATTGGATGCCAGGTGACAGGCAAACT...CTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | CCACCTTACAGCTTACGTCATTCCTGCCAAACTACCTaGCGAGGTTTCCTGGGTACCCAAGTGGAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPYSLRHSCQTT*RGFLGTQVEPK Trigger: CTTTGGCTCCACTTGGGTACCCAGGAAACCTCGCAAGGTAGTTTGGCAGGAATGACGTAAGCTGTAAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | CACATTGTTATCCAAGATTCTGAGGAGAGTTGGGCCTaGGCAAGGCTCTGGGACGAGGGTCATTCCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HIVIQDSEESWA*ARLWDEGHSLR Trigger: TCTGAGGGAATGACCCTCGTCCCAGAGCCTTGCCAAGGCCCAACTCTCCTCAGAATCTTGGATAACAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR CCA 90 bp | GTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGAATGTATCCAACAGGTCCCCATaGGCCACAGCTACCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: VHMVLAHWTHQVSAALNVSNRSP*ATATRY Trigger: GTATCTGGTAGCTGTGGCCCATGGGGACCTGTTGGA...TACATTCAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGGAAATCCCTGCATAGTGCTAGCTGGTGTGGGTTTCAGAGAGTGGGAGCTATGTATTTGCCACTaGCTGACAGTGAGATCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQGNPCIVLAGVGFREWELCICH*LTVRSQ Trigger: CTGCGATCTCACTGTCAGCCAGTGGCAAATACATAG...CTCCCACTCTCTGAAACCCACACCAGCTAGCACTATGCAGGGATTTCCCTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTCCCCATTGGTCGTTTTGCTCACCTGAAATCTCCCATCCCACTTAGAGTGGGCATTCCTCACTaGTGTAGCGGAAGCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSFPIGRFAHLKSPIPLRVGIPH*CSGSHS Trigger: GCTATGGCTTCCGCTACATCAGTGAGGAATGCCCAC...TCTAAGTGGGATGGGAGATTTCAGGTGAGCAAAACGACCAATGGGGAAGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTCCAGCGAACCCAGATTGTATCCTTTTCCCAGAGCACTGGAAGAGGAAGCCACTTTCACAACCTaGTCGAAAAGGCTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLSSEPRLYPFPRALEEEATFTT*SKRLKS Trigger: TGACTTCAGCCTTTTCGACCAGGTTGTGAAAGTGGC...TTCCTCTTCCAGTGCTCTGGGAAAAGGATACAATCTGGGTTCGCTGGAGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR GCA 90 bp | AGATCCTTCCCCATTGGTCGTTTTGCTCACCTGAAATCTCCCATCCCACTTAGACAAAGAGGAACCACGTaGCTGCAAAGGTTGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSFPIGRFAHLKSPIPLRQRGTT*LQRLQR Trigger: TCTCTGCAACCTTTGCAGGCACGTGGTTCCTCTTTG...TCTAAGTGGGATGGGAGATTTCAGGTGAGCAAAACGACCAATGGGGAAGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR GCA 90 bp | TATATAGGCTTGGGCCTCTGCCTTGAGAGTATCTTGAGCTCAACAGCTCATCAGAGGCCGGGCAATCTTTaGAAGGAAGGTACCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YIGLGLCLESILSSTAHQRPGNL*KEGTCD Trigger: ATCACAGGTACCTTCCTTGCAAAGATTGCCCGGCCT...CTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR GCA 90 bp | CAGCAATCTGGAAATCTGAGAAGTGGGTTCAGCTTTCCTGGGGAATCTGTGCCCAGTCAGCTATGTATTTaGCACTGGCTGACAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQSGNLRSGFSFPGESVPSQLCI*HWLTVR Trigger: TCTCACTGTCAGCCAGTGGCAAATACATAGCTGACT...GGGCACAGATTCCCCAGGAAAGCTGAACCCACTTCTCAGATTTCCAGATTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR GCA 90 bp | CAGCAATCTGGAAATCTGAGAAGTGGGTTCAGCTTTCCTGGGGAATCTGTGCCCCCTTCCTTTTCAGCTTaGTCTCTTAATGACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QQSGNLRSGFSFPGESVPPSFSA*SLNDSS Trigger: GGAGGAGTCATTAAGAGAGCAAGCTGAAAAGGAAGG...GGGCACAGATTCCCCAGGAAAGCTGAACCCACTTCTCAGATTTCCAGATTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | TTGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTaGCTTGCTTGTTTTAGAACTTGTTCAGCGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFARLLDRLLAP*LACFRTCSAAG Trigger: ACCTGCCGCTGAACAAGTTCTAAAACAAGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | GTGGAAGAAGAGAGGAAAATGGAAGGATGCTTTTGTTaGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VEEERKMEGCFC*LACSIAYLLPC Trigger: GCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCTTCCATTTTCCTCTCTTCTTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR TCA 90 bp | TATATAGGCTTGGGCCTCTGCCTTGAGAGTATCTTGAGCTCAACAGCTCATCAGGCCATTGCATGTCAATaGAGGTCGTCCATAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YIGLGLCLESILSSTAHQAIACQ*RSSIDP Trigger: AGGATCTATGGACGACCTTCATTGACATGCAATGGC...CTGATGAGCTGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR TCA 90 bp | CGGAGGCAGCTAGGTATCTGTGAGTTCAAGGCCAGCCTAGTCTACATAGTAAATCCTGGTCGAAAAGGCTaGAGTCAGCTATGTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRQLGICEFKASLVYIVNPGRKG*SQLCIC Trigger: GCAAATACATAGCTGACTTCAGCCTTTTCGACCAGG...ATTTACTATGTAGACTAGGCTGGCCTTGAACTCACAGATACCTAGCTGCCTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAAGCAGAATTCTGCATTTCCATCAAGAAGCCTTGTAGCCATCGCATTCGAGGAACCACGTGCCTaGAAAGGTTGCAGAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQNSAFPSRSLVAIAFEEPRA*KGCREE Trigger: CTCTTCTCTGCAACCTTTGCAGGCACGTGGTTCCTC...GAATGCGATGGCTACAAGGCTTCTTGATGGAAATGCAGAATTCTGCTTTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR CCA 90 bp | GCTTACTTGCTCCCTTGCTTGCTTGTTTTAGAACTTGTTCAGCGGCAGGTTGTTTATCGCGGAGACCACTaGGAGATGCCACTTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: AYLLPCLLVLELVQRQVVYRGDH*EMPLSQ Trigger: TTGTGAAAGTGGCATCTCCCAGTGGTCTCCGCGATA...AACAACCTGCCGCTGAACAAGTTCTAAAACAAGCAAGCAAGGGAGCAAGTAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGGGTTAAGGCAGGAAATGCTCTCTCACATTGTTATCCAAGATTCTGAGGAGAAAGGGGCTGTCTaGGGCTGTGTCTACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKGLRQEMLSHIVIQDSEEKGAV*GCVYLE Trigger: TTCCAAGTAGACACAGCCTCAGACAGCCCCTTTCTC...CTCAGAATCTTGGATAACAATGTGAGAGAGCATTTCCTGCCTTAACCCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR TCA 90 bp | AAAACATCACAAATTCCCCGAGGCTCTGTACAGCAATCTGGAAATCTGAGAAGTATGACTCCTCCAACTTaGGCTTCTCGGGGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTSQIPRGSVQQSGNLRSMTPPT*ASRGLH Trigger: ATGGAGACCCCGAGAAGCTCAAGTTGGAGGAGTCAT...ACTTCTCAGATTTCCAGATTGCTGTACAGAGCCTCGGGGAATTTGTGATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAAGCAGAATTCTGCATTTCCATCAAGAAGCCTTGTAGCCATCGCATTCGAGGCTGTGTCTACTTaGAAAGTCACGTTGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQNSAFPSRSLVAIAFEAVST*KVTLTW Trigger: CCAGGTCAACGTGACTTTCCAAGTAGACACAGCCTC...GAATGCGATGGCTACAAGGCTTCTTGATGGAAATGCAGAATTCTGCTTTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | GTAAAAAGACTGTGCACAGTTGAGATCCACTCAGTCTaGGGATCTTCTGAGTTTCTCTGCAAGGCTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VKRLCTVEIHSV*GSSEFLCKALP Trigger: GGGCAAAGCCTTGCAGAGAAACTCAGAAGATCCCAAGACTGAGTGGATCTCAACTGTGCACAGTCTTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | AGAGAGGAAAATGGAAGGATGCTTTTGTTTGCTCGCTaGCTCGATCGCTTACTTGCTCCCTTGCTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: REENGRMLLFAR*LDRLLAPLLAC Trigger: ACAAGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCTTCCATTTTCCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | AATGAAGTGAAGCCCAGGTTAGGGATTTCAGAAGCTTaGCATAGAACTGCATCAGCCTCTGGGGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NEVKPRLGISEA*HRTASASGEEE Trigger: TTCCTCTTCCCCAGAGGCTGATGCAGTTCTATGCAAAGCTTCTGAAATCCCTAACCTGGGCTTCACTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTTCCTATTCCCAGGAAACACTAAAACATATCTTTTCAGGACAGAGCTGGTGGTGAGCACCAGCTaGGCAATAAGAAGCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: KVFLFPGNTKTYLFRTELVVSTS*AIRSTM Trigger: CATCGTGCTTCTTATTGCGCAGCTGGTGCTCACCAC...CAGCTCTGTCCTGAAAAGATATGTTTTAGTGTTTCCTGGGAATAGGAAGACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTTCCTATTCCCAGGAAACACTAAAACATATCTTTTCAGGACAGAGCTGGAGACCACTGGGAGATaGCACTTTCACAACCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVFLFPGNTKTYLFRTELETTGR*HFHNLV Trigger: GACCAGGTTGTGAAAGTGGCATCTCCCAGTGGTCTC...CAGCTCTGTCCTGAAAAGATATGTTTTAGTGTTTCCTGGGAATAGGAAGACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | GGATGCTTTTGTTTGCTCGCTTGCTCGATCGCTTACTaGCTCCCTTGCTTGCTTGTTTTAGAACTTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCFCLLACSIAY*LPCLLVLELVQ Trigger: CTGAACAAGTTCTAAAACAAGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| CDS-3UTR CCA 90 bp | AAGGTCTTCCTATTCCCAGGAAACACTAAAACATATCTTTTCAGGACAGAGCTGAAGCACGATGGCCAGTaGGCATTCCTCACTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KVFLFPGNTKTYLFRTELKHDGQ*AFLTDV Trigger: TACATCAGTGAGGAATGCCCACTGGCCATCGTGCTT...CAGCTCTGTCCTGAAAAGATATGTTTTAGTGTTTCCTGGGAATAGGAAGACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
||
| 3UTR CAA 72 bp | CCTGCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTaGTTAAAGTCTGAATACTTCCTTCTGTACAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PAPPNQGKIFVP*LKSEYFLLYSP Trigger: CGGACTGTACAGAAGGAAGTATTCAGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| 3UTR CAA 72 bp | GATGAAGTACCCTCTTTAGGATTTCTCTATATAGGCTaGGGCCTCTGCCTTGAGAGTATCTTGAGCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DEVPSLGFLYIG*GLCLESILSST Trigger: TGTTGAGCTCAAGATACTCTCAAGGCAGAGGCCCAAGCCTATATAGAGAAATCCTAAAGAGGGTACTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR GCA 90 bp | CCTGTGACTAGTTTTAATAGATCGATGTTAAGAAAGGCAAATGACCATGTTTCCGCGTTTGAAGCAGTTTaGCTGTCACCTGGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVTSFNRSMLRKANDHVSAFEAV*LSPGIQ Trigger: TTGGATGCCAGGTGACAGGCAAACTGCTTCAAACGC...GGAAACATGGTCATTTGCCTTTCTTAACATCGATCTATTAAAACTAGTCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CCA 90 bp | CCTGTGACTAGTTTTAATAGATCGATGTTAAGAAAGGCAAATGACCATGTTTCCGATCTTTTAAGGGGCTaGTCTCATCTACCACGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVTSFNRSMLRKANDHVSDLLRG*SHLPRG Trigger: ACCACGTGGTAGATGAGACCAGCCCCTTAAAAGATC...GGAAACATGGTCATTTGCCTTTCTTAACATCGATCTATTAAAACTAGTCACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS TCA 90 bp | TGTCAGCAATGTGCTCCATTCTCACATTGCTCCGGCCGTCTTTCGTaGGGACCCTCCTCCGGCGTATTCCTGGGGCCACTAGGGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: CQQCAPFSHCSGRLS*GPSSGVFLGPLGGG Trigger: GCCGCCCCCTAGTGGCCCCAGGAATACGCCGGAGGAGGGTCCTCACGAAAGACGGCCGGAGCAATGTGAGAATGGAGCACATTGCTGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 90 bp | CAAGGCGTGTGGTTGGCAGGAGGTCCCAGCTCCAACAGGTCCCCATaGGCCACAGCTACCAGATACCACACCACACCAAAGAGGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGVWLAGGPSSNRSP*ATATRYHTTPKRNH Trigger: GTGGTTCCTCTTTGGTGTGGTGTGGTATCTGGTAGCTGTGGCCCATGGGGACCTGTTGGAGCTGGGACCTCCTGCCAACCACACGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 90 bp | ATCATAAGGCAAGGCTTCCCGTTATGGGAAGCCACAACGGCATGCTaGCTGAAGCGGATCGTCTCGGCCCTCTTCTTAGGCCGGGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: IIRQGFPLWEATTAC*LKRIVSALFLGRAI Trigger: GATTGCCCGGCCTAAGAAGAGGGCCGAGACGATCCGCTTCAGCCAGCATGCCGTTGTGGCTTCCCATAACGGGAAGCCTTGCCTTATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 90 bp | TTCCGCATATTGGCAACCCGGATCATAAGGCAAGGCTTCCCGTTATaGGAAGCCACAACGGCATGCTGGCTGAAGCGGATCGTCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FRILATRIIRQGFPL*EATTACWLKRIVSA Trigger: GGCCGAGACGATCCGCTTCAGCCAGCATGCCGTTGTGGCTTCCCATAACGGGAAGCCTTGCCTTATGATCCGGGTTGCCAATATGCGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CAA 90 bp | AGGATGCTTTTGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTACACAAGGCGTGTGGTaGGCAGGAGGTCCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RMLLFARLLDRLLAPLLATQGVW*AGGPSS Trigger: GGAGCTGGGACCTCCTGCCAACCACACGCCTTGTGT...AGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS TCA 90 bp | AGTCAGCTATGTATTTGCCACTGGCTGACAGTGAGATCGCAGGCGTaGACTCGTAACCCCAGAGGATCTCCTCCGGTAGGTAGGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQLCICHWLTVRSQA*TRNPRGSPPVGRKC Trigger: GCACTTCCTACCTACCGGAGGAGATCCTCTGGGGTTACGAGTTCACGCCTGCGATCTCACTGTCAGCCAGTGGCAAATACATAGCTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS GCA 90 bp | GGGGTCTCCATAGCGTACGGTGCTATCGCGGAGACCACTGGGAGATaGCACTTTCACAACCTGGTCGAAAAGGCTGAAGTCAGCTATGTA | + |
|
Preference number: 5 (lower is better) Translates to: GVSIAYGAIAETTGR*HFHNLVEKAEVSYV Trigger: TACATAGCTGACTTCAGCCTTTTCGACCAGGTTGTGAAAGTGGCATCTCCCAGTGGTCTCCGCGATAGCACCGTACGCTATGGAGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS TCA 90 bp | CACTGCCTTCCTTTTCAGCTTGCTCTCTTAATGACTCCTCCAACTTaGGCTTCTCGGGGTCTCCATAGCGTACGGTGCTATCGCGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HCLPFQLALLMTPPT*ASRGLHSVRCYRGD Trigger: GTCTCCGCGATAGCACCGTACGCTATGGAGACCCCGAGAAGCTCAAGTTGGAGGAGTCATTAAGAGAGCAAGCTGAAAAGGAAGGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 90 bp | ACGGTGCTATCGCGGAGACCACTGGGAGATGCCACTTTCACAACCTaGTCGAAAAGGCTGAAGTCAGCTATGTATTTGCCACTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVLSRRPLGDATFTT*SKRLKSAMYLPLAD Trigger: GTCAGCCAGTGGCAAATACATAGCTGACTTCAGCCTTTTCGACCAGGTTGTGAAAGTGGCATCTCCCAGTGGTCTCCGCGATAGCACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS TCA 90 bp | GGAGACCACTGGGAGATGCCACTTTCACAACCTGGTCGAAAAGGCTaGAGTCAGCTATGTATTTGCCACTGGCTGACAGTGAGATCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDHWEMPLSQPGRKG*SQLCICHWLTVRSQ Trigger: CTGCGATCTCACTGTCAGCCAGTGGCAAATACATAGCTGACTTCAGCCTTTTCGACCAGGTTGTGAAAGTGGCATCTCCCAGTGGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS GCA 90 bp | CACAGCTACCAGATACCACACCACACCAAAGAGGAACCACGTGCCTaGAAAGGTTGCAGAGAAGAGCAGAAGCTTGTAGCGCCATTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSYQIPHHTKEEPRA*KGCREEQKLVAPLH Trigger: ATGCAATGGCGCTACAAGCTTCTGCTCTTCTCTGCAACCTTTGCAGGCACGTGGTTCCTCTTTGGTGTGGTGTGGTATCTGGTAGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS GCA 90 bp | ACGTTGCTGATGCGCACACTAAGGGCACTGCCTTCCTTTTCAGCTTaGTCTCTTAATGACTCCTCCAACTTGAGCTTCTCGGGGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLMRTLRALPSFSA*SLNDSSNLSFSGSP Trigger: TGGAGACCCCGAGAAGCTCAAGTTGGAGGAGTCATTAAGAGAGCAAGCTGAAAAGGAAGGCAGTGCCCTTAGTGTGCGCATCAGCAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CAA 90 bp | GGTCTGGGGTGGGAGAAAAGGAAGCAATGGAACTGGTACAGTGTAATCTGGATGTGCTCCATTCTCACATaGCTCCGGCCGTCTTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLGWEKRKQWNWYSVIWMCSILT*LRPSFV Trigger: CACGAAAGACGGCCGGAGCAATGTGAGAATGGAGCA...CATCCAGATTACACTGTACCAGTTCCATTGCTTCCTTTTCTCCCACCCCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CAA 90 bp | ACAGCAGTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGACTTGGAAAGTCACGTaGACCTGGTTGAGCCGAATA | + |
|
Preference number: 5 (lower is better) Translates to: TAVHMVLAHWTHQVSAALTWKVT*TWLSRI Trigger: TATTCGGCTCAACCAGGTCAACGTGACTTTCCAAGT...CAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTACTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS GCA 90 bp | CAGATACCACACCACACCAAAGAGGAACCACGTGCCTGCAAAGGTTaGAGAGAAGAGCAGAAGCTTGTAGCGCCATTGCATGTCAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: QIPHHTKEEPRACKG*REEQKLVAPLHVNE Trigger: TTCATTGACATGCAATGGCGCTACAAGCTTCTGCTCTTCTCTGCAACCTTTGCAGGCACGTGGTTCCTCTTTGGTGTGGTGTGGTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CAA 90 bp | CGGAGGCAGCTAGGTATCTGTGAGTTCAAGGCCAGCCTAGTCTACATAGTAAATAGACTCTTCCGCATATaGGCAACCCGGATCATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRQLGICEFKASLVYIVNRLFRI*ATRIIR Trigger: CCTTATGATCCGGGTTGCCAATATGCGGAAGAGTCT...ATTTACTATGTAGACTAGGCTGGCCTTGAACTCACAGATACCTAGCTGCCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CAA 90 bp | AGGATGCTTTTGTTTGCTCGCTTGCTCGATCGCTTACTTGCTCCCTTGCTTGCTTATTCTCACCCTCCTTaGTCTGGTGCGTTTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMLLFARLLDRLLAPLLAYSHPP*SGAFEA Trigger: TGCTTCAAACGCACCAGACAAAGGAGGGTGAGAATA...AGCAAGCAAGGGAGCAAGTAAGCGATCGAGCAAGCGAGCAAACAAAAGCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CAA 90 bp | GTACACATGGTCCTTGCACACTGGACACATCAGGTAAGCGCAGCGTTGAATGTAAAGTCAGCTATGTATTaGCCACTGGCTGACAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VHMVLAHWTHQVSAALNVKSAMY*PLADSE Trigger: CTCACTGTCAGCCAGTGGCAAATACATAGCTGACTT...TACATTCAACGCTGCGCTTACCTGATGTGTCCAGTGTGCAAGGACCATGTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CAA 90 bp | ACACTAAAACATATCTTTTCAGGACAGAGCTGCCCAAAGGACAGGGCCAGAGTAAAGCTTGTAGCGCCATaGCATGTCAATGAAGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TLKHIFSGQSCPKDRARVKLVAP*HVNEGR Trigger: ACGACCTTCATTGACATGCAATGGCGCTACAAGCTT...TACTCTGGCCCTGTCCTTTGGGCAGCTCTGTCCTGAAAAGATATGTTTTAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS-3UTR CAA 90 bp | AGCTATCCTGCTCCCCCAAACCAAGGCAAAATATTTGTCCCTTTGTTAAAGTCTAATGACTCCTCCAACTaGAGCTTCTCGGGGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SYPAPPNQGKIFVPLLKSNDSSN*SFSGSP Trigger: TGGAGACCCCGAGAAGCTCAAGTTGGAGGAGTCATT...AGACTTTAACAAAGGGACAAATATTTTGCCTTGGTTTGGGGGAGCAGGATAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 72 bp | CCGGTGAGCGTGTGCACCTGCACCACACAAGGCGTGTaGTTGGCAGGAGGTCCCAGCTCCAACAGGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PVSVCTCTTQGV*LAGGPSSNRSP Trigger: TGGGGACCTGTTGGAGCTGGGACCTCCTGCCAACCACACGCCTTGTGTGGTGCAGGTGCACACGCTCACCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CAA 90 bp | AAGGCTCCGGTGAGCGTGTGCACCTGCACCACACAAGGCGTGTGGTaGGCAGGAGGTCCCAGCTCCAACAGGTCCCCATGGGCCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KAPVSVCTCTTQGVW*AGGPSSNRSPWATA Trigger: AGCTGTGGCCCATGGGGACCTGTTGGAGCTGGGACCTCCTGCCAACCACACGCCTTGTGTGGTGCAGGTGCACACGCTCACCGGAGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CAA 72 bp | GTGAGCGTGTGCACCTGCACCACACAAGGCGTGTGGTaGGCAGGAGGTCCCAGCTCCAACAGGTCCCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVCTCTTQGVW*AGGPSSNRSPW Trigger: CCATGGGGACCTGTTGGAGCTGGGACCTCCTGCCAACCACACGCCTTGTGTGGTGCAGGTGCACACGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS TCA 72 bp | TGTGCTCCATTCTCACATTGCTCCGGCCGTCTTTCGTaGGGACCCTCCTCCGGCGTATTCCTGGGGCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: CAPFSHCSGRLS*GPSSGVFLGPL Trigger: TAGTGGCCCCAGGAATACGCCGGAGGAGGGTCCTCACGAAAGACGGCCGGAGCAATGTGAGAATGGAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 72 bp | TGGTTGGCAGGAGGTCCCAGCTCCAACAGGTCCCCATaGGCCACAGCTACCAGATACCACACCACACCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WLAGGPSSNRSP*ATATRYHTTPK Trigger: CTTTGGTGTGGTGTGGTATCTGGTAGCTGTGGCCCATGGGGACCTGTTGGAGCTGGGACCTCCTGCCAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 72 bp | TTGGCAACCCGGATCATAAGGCAAGGCTTCCCGTTATaGGAAGCCACAACGGCATGCTGGCTGAAGCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LATRIIRQGFPL*EATTACWLKRI Trigger: GATCCGCTTCAGCCAGCATGCCGTTGTGGCTTCCCATAACGGGAAGCCTTGCCTTATGATCCGGGTTGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 72 bp | GGTCTCCATAGCGTACGGTGCTATCGCGGAGACCACTaGGAGATGCCACTTTCACAACCTGGTCGAAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLHSVRCYRGDH*EMPLSQPGRKG Trigger: GCCTTTTCGACCAGGTTGTGAAAGTGGCATCTCCCAGTGGTCTCCGCGATAGCACCGTACGCTATGGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS TCA 72 bp | TGTATTTGCCACTGGCTGACAGTGAGATCGCAGGCGTaGACTCGTAACCCCAGAGGATCTCCTCCGGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CICHWLTVRSQA*TRNPRGSPPVG Trigger: ACCTACCGGAGGAGATCCTCTGGGGTTACGAGTTCACGCCTGCGATCTCACTGTCAGCCAGTGGCAAATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CAA 72 bp | AGGAAACGTTTGTCAGCAATGTGCTCCATTCTCACATaGCTCCGGCCGTCTTTCGTGAGGACCCTCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RKRLSAMCSILT*LRPSFVRTLLR Trigger: CCGGAGGAGGGTCCTCACGAAAGACGGCCGGAGCAATGTGAGAATGGAGCACATTGCTGACAAACGTTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS GCA 72 bp | ATAGCGTACGGTGCTATCGCGGAGACCACTGGGAGATaGCACTTTCACAACCTGGTCGAAAAGGCTGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: IAYGAIAETTGR*HFHNLVEKAEV Trigger: GACTTCAGCCTTTTCGACCAGGTTGTGAAAGTGGCATCTCCCAGTGGTCTCCGCGATAGCACCGTACGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CAA 90 bp | AGTTTGCCTGTCACCTGGCATCCAATGAGGAGACTCTTCCGCATATaGGCAACCCGGATCATAAGGCAAGGCTTCCCGTTATGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPVTWHPMRRLFRI*ATRIIRQGFPLWEA Trigger: GGCTTCCCATAACGGGAAGCCTTGCCTTATGATCCGGGTTGCCAATATGCGGAAGAGTCTCCTCATTGGATGCCAGGTGACAGGCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS TCA 72 bp | GCGTTTGAAGCAGTTTGCCTGTCACCTGGCATCCAATaGGGAGACTCTTCCGCATATTGGCAACCCGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: AFEAVCLSPGIQ*GDSSAYWQPGS Trigger: TGATCCGGGTTGCCAATATGCGGAAGAGTCTCCTCATTGGATGCCAGGTGACAGGCAAACTGCTTCAAACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS GCA 72 bp | CAGATACCACACCACACCAAAGAGGAACCACGTGCCTaGAAAGGTTGCAGAGAAGAGCAGAAGCTTGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: QIPHHTKEEPRA*KGCREEQKLVA Trigger: CGCTACAAGCTTCTGCTCTTCTCTGCAACCTTTGCAGGCACGTGGTTCCTCTTTGGTGTGGTGTGGTATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS GCA 72 bp | GTGATGAAGATTTCCAGAATGGTGGTGAGCACCAGCTaGGCAATAAGAAGCACGATGGCCAGTGGGCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: VMKISRMVVSTS*AIRSTMASGHS Trigger: GGAATGCCCACTGGCCATCGTGCTTCTTATTGCGCAGCTGGTGCTCACCACCATTCTGGAAATCTTCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CAA 72 bp | GTCACCTGGCATCCAATGAGGAGACTCTTCCGCATATaGGCAACCCGGATCATAAGGCAAGGCTTCCCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: VTWHPMRRLFRI*ATRIIRQGFPL Trigger: TAACGGGAAGCCTTGCCTTATGATCCGGGTTGCCAATATGCGGAAGAGTCTCCTCATTGGATGCCAGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 72 bp | TCGCGGAGACCACTGGGAGATGCCACTTTCACAACCTaGTCGAAAAGGCTGAAGTCAGCTATGTATTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRRPLGDATFTT*SKRLKSAMYLP Trigger: TGGCAAATACATAGCTGACTTCAGCCTTTTCGACCAGGTTGTGAAAGTGGCATCTCCCAGTGGTCTCCGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CAA 72 bp | GGGCTGTCTGAGGCTGTGTCTACTTGGAAAGTCACGTaGACCTGGTTGAGCCGAATATTCTCACCCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLSEAVSTWKVT*TWLSRIFSPSF Trigger: AAAGGAGGGTGAGAATATTCGGCTCAACCAGGTCAACGTGACTTTCCAAGTAGACACAGCCTCAGACAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS TCA 72 bp | CCTTTTCAGCTTGCTCTCTTAATGACTCCTCCAACTTaGGCTTCTCGGGGTCTCCATAGCGTACGGTGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: PFQLALLMTPPT*ASRGLHSVRCY Trigger: ATAGCACCGTACGCTATGGAGACCCCGAGAAGCTCAAGTTGGAGGAGTCATTAAGAGAGCAAGCTGAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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| CDS CCA 72 bp | AGGATGAGAAAGGGGCTGTCTGAGGCTGTGTCTACTTaGAAAGTCACGTTGACCTGGTTGAGCCGAATATTC | + |
|
Preference number: 6 (lower is better) Translates to: RMRKGLSEAVST*KVTLTWLSRIF Trigger: GAATATTCGGCTCAACCAGGTCAACGTGACTTTCCAAGTAGACACAGCCTCAGACAGCCCCTTTCTCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056136.4 |
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