Pregenerated sensors for KCNJ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041248Ensembl transcript IDs: ENSMUST00000047334.10, ENSMUST00000172015.3, ENSMUST00000213393.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCCTTCTaGAACATGGACCCAGACTCAGACAAAGGCTTCAAACAGCAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: WVEKGAVTGCPPYPF*NMDPDSDKGFKQQS Trigger: GCTCTGCTGTTTGAAGCCTTTGTCTGAGTCTGGGTCCATGTTTCAGAAGGGGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 90 bp | GAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCATCCTaGCTGTGGTGCTGTATCTCGTTCCTTTCTCCTTCATACCTAGAA | + |
|
Preference number: 1 (lower is better) Translates to: EDVGMAFRDKKAAAS*LWCCISFLSPSYLE Trigger: TTCTAGGTATGAAGGAGAAAGGAACGAGATACAGCACCACAGTCAGGATGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 90 bp | TTAGAGCCTTTAGTGATTCTGTGTATGACAGGCTCTTATTGTCAGTaGCTGGTTGGCTCACTTCCCAACTCAGAAGACAGATTTTCCGTT | + |
|
Preference number: 1 (lower is better) Translates to: LEPLVILCMTGSYCQ*LVGSLPNSEDRFSV Trigger: AACGGAAAATCTGTCTTCTGAGTTGGGAAGTGAGCCAACCAGTCACTGACAATAAGAGCCTGTCATACACAGAATCACTAAAGGCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 90 bp | TCTCTCCCTGAACTGGTACCTCACCCATTCAGCTGTCCAGAAAACTaGAGACATCCTCCTATCCCTACCTCCCCAGTACTAGGATTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SLPELVPHPFSCPEN*RHPPIPTSPVLGLG Trigger: CCCCAATCCTAGTACTGGGGAGGTAGGGATAGGAGGATGTCTCAAGTTTTCTGGACAGCTGAATGGGTGAGGTACCAGTTCAGGGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCACCACCTTACCCCTTCTaGAACATGGACCCAGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: ALYVIVGGSDPGLHACAAPPYPF*NMDPDS Trigger: TGAGTCTGGGTCCATGTTTCAGAAGGGGTAAGGTGG...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCAGAAAGGTGCAGTCACTaGATGCCCACCTTACCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ALYVIVGGSDPGLHACAAERCSH*MPTLPL Trigger: AAGGGGTAAGGTGGGCATCCAGTGACTGCACCTTTC...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 90 bp | CATACACACTCCAGGCTGACTGCTTTCCCAGTCCTCAGCACCATCTaGAGAGAGGAAGGAATAAAACCTCTTTTACCAGACCTGTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: HTHSRLTAFPVLSTI*REEGIKPLLPDLWP Trigger: GGGCCACAGGTCTGGTAAAAGAGGTTTTATTCCTTCCTCTCTCAAGATGGTGCTGAGGACTGGGAAAGCAGTCAGCCTGGAGTGTGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCACCACCTTACCCCTTCTaGAACATGGACCCAGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: LFPLEDVGMAFRDKKAAAPPYPF*NMDPDS Trigger: TGAGTCTGGGTCCATGTTTCAGAAGGGGTAAGGTGG...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCACTTGGGTTCTCATCCTaGTTTCAGTCCCCCAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: LFPLEDVGMAFRDKKAAALGFSS*FQSPNC Trigger: GCAGTTGGGGGACTGAAAGCAGGATGAGAACCCAAG...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCCCCTTCACCTTATTTTTGTAGTCTCTCCCTGAACTGGTACCTCACCCATACCCCTTCTGAAACATaGACCCAGACTCAGACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PAPSPYFCSLSLNWYLTHTPSET*TQTQTK Trigger: CTTTGTCTGAGTCTGGGTCCATGTTTCAGAAGGGGT...ATGGGTGAGGTACCAGTTCAGGGAGAGACTACAAAAATAAGGTGAAGGGGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCCAATATGGCTAGCTCCTaGAGTTTTCTAAAGCTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SSVPWVEKGAVTGCPPYPNMASS*SFLKLL Trigger: TAGGAGCTTTAGAAAACTTCAGGAGCTAGCCATATT...GGGGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | GCGCAGCATGAACTTACAAAGAATGTCATCTCTTCAGCCTCTTCACCAACACTTGGCTCTTATTGTCAGTaGCTGGTTGGCTCACTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AQHELTKNVISSASSPTLGSYCQ*LVGSLP Trigger: GGGAAGTGAGCCAACCAGTCACTGACAATAAGAGCC...AAGTGTTGGTGAAGAGGCTGAAGAGATGACATTCTTTGTAAGTTCATGCTGCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR GCA 90 bp | GCGCAGCATGAACTTACAAAGAATGTCATCTCTTCAGCCTCTTCACCAACACTTCTTGGGTTCTCATCCTaGTTTCAGTCCCCCAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: AQHELTKNVISSASSPTLLGFSS*FQSPNC Trigger: GCAGTTGGGGGACTGAAAGCAGGATGAGAACCCAAG...AAGTGTTGGTGAAGAGGCTGAAGAGATGACATTCTTTGTAAGTTCATGCTGCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | GCGCAGCATGAACTTACAAAGAATGTCATCTCTTCAGCCTCTTCACCAACACTTGAAAGGTGCAGTCACTaGATGCCCACCTTACCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: AQHELTKNVISSASSPTLERCSH*MPTLPL Trigger: AAGGGGTAAGGTGGGCATCCAGTGACTGCACCTTTC...AAGTGTTGGTGAAGAGGCTGAAGAGATGACATTCTTTGTAAGTTCATGCTGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | GACTGCTTTCCCAGTCCTCAGCACCATCTTGAGAGAGGAAGGAATAAAACCTCTAGGTCCATTCCTATATaGGCTGCAGCGTCTGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: DCFPSPQHHLERGRNKTSRSIPI*AAASEL Trigger: TAACTCAGACGCTGCAGCCCATATAGGAATGGACCT...AGAGGTTTTATTCCTTCCTCTCTCAAGATGGTGCTGAGGACTGGGAAAGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCAAGTCTCTCCCTGAACTaGTACCTCACCCATTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LFPLEDVGMAFRDKKAAASLSLN*YLTHSA Trigger: AGCTGAATGGGTGAGGTACCAGTTCAGGGAGAGACT...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCAAATATGGCTAGCTCCTaGAGTTTTCTAAAGCTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: ALYVIVGGSDPGLHACAANMASS*SFLKLL Trigger: TAGGAGCTTTAGAAAACTTCAGGAGCTAGCCATATT...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | TATCTCGTTCCTTTCTCCTTCATACCTAGAATTGCAGTTCAACCACTAGGCAGACAAGTGAGCTCCTTTTaGCTTCCACACGCCAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: YLVPFSFIPRIAVQPLGRQVSSF*LPHARF Trigger: GAACCTGGCGTGTGGAAGCCAAAAGGAGCTCACTTG...TCTGCCTAGTGGTTGAACTGCAATTCTAGGTATGAAGGAGAAAGGAACGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTAGAATTGCAGTTCAACCACTAGGCAGAGAAACACAAGAACCATTCGGTGTTGCTGTCCAGAAAACTTaGGACATCCTCCTATCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PRIAVQPLGRETQEPFGVAVQKT*DILLSL Trigger: TAGGGATAGGAGGATGTCTCAAGTTTTCTGGACAGC...AACACCGAATGGTTCTTGTGTTTCTCTGCCTAGTGGTTGAACTGCAATTCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAACAAGTGAGCTCCTTTTaGCTTCCACACGCCAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEQVSSF*LPHARF Trigger: GAACCTGGCGTGTGGAAGCCAAAAGGAGCTCACTTG...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTAGAATTGCAGTTCAACCACTAGGCAGAGAAACACAAGAACCATTCGGTGTTACCCCTTCTGAAACATaGACCCAGACTCAGACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PRIAVQPLGRETQEPFGVTPSET*TQTQTK Trigger: CTTTGTCTGAGTCTGGGTCCATGTTTCAGAAGGGGT...AACACCGAATGGTTCTTGTGTTTCTCTGCCTAGTGGTTGAACTGCAATTCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 90 bp | TTAGAACCTTCCTCCGAAGTAAATTCTCCTGCTAACTTGTTCCCTTaGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LEPSSEVNSPANLFP*EDVGMAFRDKKAAA Trigger: TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAAGTTAGCAGGAGAATTTACTTCGGAGGAAGGTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR GCA 90 bp | GACTGCTTTCCCAGTCCTCAGCACCATCTTGAGAGAGGAAGGAATAAAACCTCTAAACAAACATCACTATaGTCTGTGTGTGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: DCFPSPQHHLERGRNKTSKQTSL*SVCVCV Trigger: CACACACACACACACAGAGCATAGTGATGTTTGTTT...AGAGGTTTTATTCCTTCCTCTCTCAAGATGGTGCTGAGGACTGGGAAAGCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAAAGTCTCTCCCTGAACTaGTACCTCACCCATTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VIDSYEVLCQEPNLGSLESLSLN*YLTHSA Trigger: AGCTGAATGGGTGAGGTACCAGTTCAGGGAGAGACT...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCAGTACATGTCAATGGATaGCTTTGTTTCCATCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: LFPLEDVGMAFRDKKAAAVHVNG*LCFHQH Trigger: GTGTTGATGGAAACAAAGTCATCCATTGACATGTAC...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAAGCTGTCCAGAAAACTTaGGACATCCTCCTATCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEAVQKT*DILLSL Trigger: TAGGGATAGGAGGATGTCTCAAGTTTTCTGGACAGC...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR GCA 90 bp | TATCTCGTTCCTTTCTCCTTCATACCTAGAATTGCAGTTCAACCACTAGGCAGAATGTGTATAGTGTTTTaGTCGCATGTGCACCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: YLVPFSFIPRIAVQPLGRMCIVF*SHVHLV Trigger: CACCAGGTGCACATGCGAGCAAAACACTATACACAT...TCTGCCTAGTGGTTGAACTGCAATTCTAGGTATGAAGGAGAAAGGAACGAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTAGAATTGCAGTTCAACCACTAGGCAGAGAAACACAAGAACCATTCGGTGTTGTACATGTCAATGGATaGCTTTGTTTCCATCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: PRIAVQPLGRETQEPFGVVHVNG*LCFHQH Trigger: GTGTTGATGGAAACAAAGTCATCCATTGACATGTAC...AACACCGAATGGTTCTTGTGTTTCTCTGCCTAGTGGTTGAACTGCAATTCTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAAGTCAAGCTTTGTATGTaGTTGTTGGAGGTTCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEVKLCM*LLEVQT Trigger: GGTCTGAACCTCCAACAATCACATACAAAGCTTGAC...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | TATCTCGTTCCTTTCTCCTTCATACCTAGAATTGCAGTTCAACCACTAGGCAGATTTGTATGTGATTGTTaGAGGTTCAGACCCAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: YLVPFSFIPRIAVQPLGRFVCDC*RFRPRS Trigger: AGACCTGGGTCTGAACCTCCAACAATCACATACAAA...TCTGCCTAGTGGTTGAACTGCAATTCTAGGTATGAAGGAGAAAGGAACGAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CCA 90 bp | GCGCAGCATGAACTTACAAAGAATGTCATCTCTTCAGCCTCTTCACCAACACTTTCCAGTACATGTCAATaGATGACTTTGTTTCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: AQHELTKNVISSASSPTLSSTCQ*MTLFPS Trigger: TGATGGAAACAAAGTCATCCATTGACATGTACTGGA...AAGTGTTGGTGAAGAGGCTGAAGAGATGACATTCTTTGTAAGTTCATGCTGCGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR GCA 72 bp | GGTGACTCTGCTGGTAGACTTCTTGGGTTCTCATCCTaGTTTCAGTCCCCCAACTGCAGGATGCTTCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GDSAGRLLGFSS*FQSPNCRMLLN Trigger: GTTCAGAAGCATCCTGCAGTTGGGGGACTGAAAGCAGGATGAGAACCCAAGAAGTCTACCAGCAGAGTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCTGCTGGTAGACTTCTaGGGTTCTCATCCTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLLYLGLRKVQSLDAHLTLLVDF*GSHPAF Trigger: GAAAGCAGGATGAGAACCCAAGAAGTCTACCAGCAG...GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CCA 72 bp | CAGTCACTGGATGCCCACCTTACCCCTTCTGAAACATaGACCCAGACTCAGACAAAGGCTTCAAACAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QSLDAHLTPSET*TQTQTKASNSR Trigger: TCTGCTGTTTGAAGCCTTTGTCTGAGTCTGGGTCCATGTTTCAGAAGGGGTAAGGTGGGCATCCAGTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCCCTTCACCTTATTTTTGTAGTCTCTCCCTGAACTGGTACCTCACCCATCTGCTGGTAGACTTCTaGGGTTCTCATCCTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PAPSPYFCSLSLNWYLTHLLVDF*GSHPAF Trigger: GAAAGCAGGATGAGAACCCAAGAAGTCTACCAGCAG...ATGGGTGAGGTACCAGTTCAGGGAGAGACTACAAAAATAAGGTGAAGGGGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCTATGACAGGCTCTTATaGTCAGTGACTGGTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VLLYLGLRKVQSLDAHLTYDRLL*SVTGWL Trigger: GAGCCAACCAGTCACTGACAATAAGAGCCTGTCATA...GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 72 bp | AAAGGTGCAGTCACTGGATGCCCACCTTACCCCTTCTaGAACATGGACCCAGACTCAGACAAAGGCTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KGAVTGCPPYPF*NMDPDSDKGFK Trigger: TTTGAAGCCTTTGTCTGAGTCTGGGTCCATGTTTCAGAAGGGGTAAGGTGGGCATCCAGTGACTGCACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 72 bp | GGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCATaGACTTACAAAGAATGTCATCTCTTCAGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GGSDPGLHACAA*TYKECHLFSLF Trigger: GAAGAGGCTGAAGAGATGACATTCTTTGTAAGTTCATGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 72 bp | CGCCAGCCCCTTCACCTTATTTTTGTAGTCTCTCCCTaGACTGGTACCTCACCCATTCAGCTGTCCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RQPLHLIFVVSP*TGTSPIQLSRK Trigger: TTTTCTGGACAGCTGAATGGGTGAGGTACCAGTTCAGGGAGAGACTACAAAAATAAGGTGAAGGGGCTGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 72 bp | GGGATGGCCTTTAGAGACAAGAAAGCAGCAGCATCCTaGCTGTGGTGCTGTATCTCGTTCCTTTCTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GMAFRDKKAAAS*LWCCISFLSPS Trigger: TGAAGGAGAAAGGAACGAGATACAGCACCACAGTCAGGATGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CCA 72 bp | GAGCATCCTACTAAGTCAAGCTTTGTATGTGATTGTTaGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EHPTKSSFVCDC*RFRPRSSCVRS Trigger: GCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGCTTGACTTAGTAGGATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CCA 72 bp | TACACAGTCAGAGTGAAGATCCAAGTGAGCTCCTTTTaGCTTCCACACGCCAGGTTCATTCACATGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YTVRVKIQVSSF*LPHARFIHMLP Trigger: TGGAAGCATGTGAATGAACCTGGCGTGTGGAAGCCAAAAGGAGCTCACTTGGATCTTCACTCTGACTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCATGTCAATGGATGACTTaGTTTCCATCAACACTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ALYVIVGGSDPGLHACAACQWMT*FPSTLY Trigger: GTACAGTGTTGATGGAAACAAAGTCATCCATTGACA...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 72 bp | CCAGACCTGTGGCCCTATAACCTACCCACTGAATACTaGAACAAACATCACTATGCTCTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PDLWPYNLPTEY*NKHHYALCVCV Trigger: CACACACACACACAGAGCATAGTGATGTTTGTTTCAGTATTCAGTGGGTAGGTTATAGGGCCACAGGTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CCA 72 bp | ATGAAATTGGTTGAGGCTTTCTGTTCTTCTGTACCTTaGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: MKLVEAFCSSVP*VEKGAVTGCPP Trigger: AGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAACAGAAAGCCTCAACCAATTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCAGTCCTCAGCACCATCTaGAGAGAGGAAGGAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LFPLEDVGMAFRDKKAAAVLSTI*REEGIK Trigger: TTTTATTCCTTCCTCTCTCAAGATGGTGCTGAGGAC...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR GCA 72 bp | GTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATaGGTGCGCAGCATGAACTTACAAAGAATGTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: VCDCWRFRPRSS*VRSMNLQRMSS Trigger: AGATGACATTCTTTGTAAGTTCATGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CCA 72 bp | TCTGTGTATGACAGGCTCTTATTGTCAGTGACTGGTTaGCTCACTTCCCAACTCAGAAGACAGATTTTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: SVYDRLLLSVTG*LTSQLRRQIFR Trigger: ACGGAAAATCTGTCTTCTGAGTTGGGAAGTGAGCCAACCAGTCACTGACAATAAGAGCCTGTCATACACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCCCTTCACCTTATTTTTGTAGTCTCTCCCTGAACTGGTACCTCACCCATGAGTTAGTTATGAAATaGGTTGAGGCTTTCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PAPSPYFCSLSLNWYLTHELVMK*VEAFCS Trigger: AGAACAGAAAGCCTCAACCAATTTCATAACTAACTC...ATGGGTGAGGTACCAGTTCAGGGAGAGACTACAAAAATAAGGTGAAGGGGCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCCCTTCACCTTATTTTTGTAGTCTCTCCCTGAACTGGTACCTCACCCATCTCAAACACTCTCCTTaGCAAGAGAATGTTCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PAPSPYFCSLSLNWYLTHLKHSP*QENVHL Trigger: TAAATGAACATTCTCTTGCAAAGGAGAGTGTTTGAG...ATGGGTGAGGTACCAGTTCAGGGAGAGACTACAAAAATAAGGTGAAGGGGCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGAATTGCAGTTCAACCACTAGGCAGAGAAACACAAGAACCATTCGGTGTTGTCCTCAGCACCATCTaGAGAGAGGAAGGAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PRIAVQPLGRETQEPFGVVLSTI*REEGIK Trigger: TTTTATTCCTTCCTCTCTCAAGATGGTGCTGAGGAC...AACACCGAATGGTTCTTGTGTTTCTCTGCCTAGTGGTTGAACTGCAATTCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 72 bp | TTAGTGATTCTGTGTATGACAGGCTCTTATTGTCAGTaGCTGGTTGGCTCACTTCCCAACTCAGAAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LVILCMTGSYCQ*LVGSLPNSEDR Trigger: TCTGTCTTCTGAGTTGGGAAGTGAGCCAACCAGTCACTGACAATAAGAGCCTGTCATACACAGAATCACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | GCGCAGCATGAACTTACAAAGAATGTCATCTCTTCAGCCTCTTCACCAACACTTTGTCAATGGATGACTTaGTTTCCATCAACACTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: AQHELTKNVISSASSPTLCQWMT*FPSTLY Trigger: GTACAGTGTTGATGGAAACAAAGTCATCCATTGACA...AAGTGTTGGTGAAGAGGCTGAAGAGATGACATTCTTTGTAAGTTCATGCTGCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCACTCAAACACTCTCCTTaGCAAGAGAATGTTCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: LFPLEDVGMAFRDKKAAALKHSP*QENVHL Trigger: TAAATGAACATTCTCTTGCAAAGGAGAGTGTTTGAG...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR TCA 72 bp | AAAGCTCCTAACTTTTCTCCAGTACATGTCAATGGATaGCTTTGTTTCCATCAACACTGTACGAGCTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: KAPNFSPVHVNG*LCFHQHCTSLH Trigger: GTGTAAGCTCGTACAGTGTTGATGGAAACAAAGTCATCCATTGACATGTACTGGAGAAAAGTTAGGAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | GTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCAGGCACATGGCACAATaGGGGGTCTCCACTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYLGLRKVQSLDAHLTRHMAQ*GVSTST Trigger: GGTGGAAGTGGAGACCCCTCATTGTGCCATGTGCCT...GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCAAGGCACATGGCACAATaGGGGGTCTCCACTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ALYVIVGGSDPGLHACAARHMAQ*GVSTST Trigger: GGTGGAAGTGGAGACCCCTCATTGTGCCATGTGCCT...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCCAGTACGGTTGTCAGGTaGGTAGAACTCTGGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWVEKGAVTGCPPYPSTVVR*VELWEI Trigger: GATCTCCCAGAGTTCTACCCACCTGACAACCGTACT...GGGGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCCAACTCGAAGTCCTGTTaGGAAAGAGTTTCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWVEKGAVTGCPPYPNSKSC*ERVSAA Trigger: GGCGGCAGAAACTCTTTCCCAACAGGACTTCGAGTT...GGGGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCCGGCAGGTTGCACTGGTaGATTCTACTGTGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWVEKGAVTGCPPYPGRLHW*ILLCHL Trigger: TAGATGGCACAGTAGAATCCACCAGTGCAACCTGCC...GGGGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCTATGATGTGCGGACTTaGCAGGTTGCACTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLYLGLRKVQSLDAHLTYDVRT*QVALVD Trigger: ATCCACCAGTGCAACCTGCCAAGTCCGCACATCATA...GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCCGCAGAAAAATGGCAGTaGCACACTGTTCTGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWVEKGAVTGCPPYPAEKWQ*HTVLSQ Trigger: TTGTGACAGAACAGTGTGCCACTGCCATTTTTCTGC...GGGGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GACTGCTTTCCCAGTCCTCAGCACCATCTTGAGAGAGGAAGGAATAAAACCTCTGTTTCTGCCGCCATGTaGAAGAAAGGGCTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCFPSPQHHLERGRNKTSVSAAM*KKGLLW Trigger: CCACAACAGCCCTTTCTTCCACATGGCGGCAGAAAC...AGAGGTTTTATTCCTTCCTCTCTCAAGATGGTGCTGAGGACTGGGAAAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACAACTCGAAGTCCTGTTaGGAAAGAGTTTCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSSVPWVEKGAVTGCPPYNSKSC*ERVSAA Trigger: GGCGGCAGAAACTCTTTCCCAACAGGACTTCGAGTT...GTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACTATGATGTGCGGACTTaGCAGGTTGCACTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSVPWVEKGAVTGCPPYYDVRT*QVALVD Trigger: ATCCACCAGTGCAACCTGCCAAGTCCGCACATCATA...GTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCTGGTCTTGGATACGATaGGAACAAAACGGTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYLGLRKVQSLDAHLTWSWIR*EQNGNP Trigger: GGGGTTACCGTTTTGTTCCCATCGTATCCAAGACCA...GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 72 bp | GAACTGGTACCTCACCCATTCAGCTGTCCAGAAAACTaGAGACATCCTCCTATCCCTACCTCCCCAGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: ELVPHPFSCPEN*RHPPIPTSPVL Trigger: TAGTACTGGGGAGGTAGGGATAGGAGGATGTCTCAAGTTTTCTGGACAGCTGAATGGGTGAGGTACCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCAGCGGACTTGGCAGGTTaGACTGGTGGATTCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPLEDVGMAFRDKKAAAADLAG*TGGFYC Trigger: ACAGTAGAATCCACCAGTGCAACCTGCCAAGTCCGC...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 72 bp | TTACACAGTCAGAGTGAAGATCCAAGTGAGCTCCTTTaGGCTTCCACACGCCAGGTTCATTCACATGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSQSEDPSELL*ASTRQVHSHAS Trigger: GGAAGCATGTGAATGAACCTGGCGTGTGGAAGCCAAAAGGAGCTCACTTGGATCTTCACTCTGACTGTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 72 bp | AATTGGTTGAGGCTTTCTGTTCTTCTGTACCTTGGGTaGAGAAAGGTGCAGTCACTGGATGCCCACCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: NWLRLSVLLYLG*RKVQSLDAHLT Trigger: GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAACAGAAAGCCTCAACCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | TGTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACGAACGCCCAAATATGTaGGTGACAAACCATCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CSSVPWVEKGAVTGCPPYERPNM*VTNHLR Trigger: TCGAAGATGGTTTGTCACTCACATATTTGGGCGTTC...GTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCACATCCTTTCTGTCAGTaGCCTGATCAGCACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFPLEDVGMAFRDKKAAAHPFCQ*PDQHSA Trigger: TGCAGAGTGCTGATCAGGGCACTGACAGAAAGGATG...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCTTCACCTTATTTTTGTAGTCTCTCCCTGAACTGGTACCTCACCCATTACACCTTCCATCTTTaGAGACCAACCTTGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PAPSPYFCSLSLNWYLTHYTFHL*RPTLLV Trigger: AACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTA...ATGGGTGAGGTACCAGTTCAGGGAGAGACTACAAAAATAAGGTGAAGGGGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACTCCCTTCCTTGGTCTTaGATACGATGGGAACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSSVPWVEKGAVTGCPPYSLPWS*IRWEQN Trigger: GTTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGA...GTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCCTTGTCAGTGGGGAAATaGAGAACAAATTTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWVEKGAVTGCPPYPLSVGK*RTNFHC Trigger: GCAATGAAAATTTGTTCTTCATTTCCCCACTGACAA...GGGGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR GCA 90 bp | GTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCTATAAACCTCGACTGTaGATCTACATTGCCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYLGLRKVQSLDAHLTYKPRL*IYIAKL Trigger: GAGTTTGGCAATGTAGATGCACAGTCGAGGTTTATA...GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR GCA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCATGGTGGATTCTACTGTaGCATCTAAAAAGACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALYVIVGGSDPGLHACAAWWILL*HLKRQP Trigger: TGGTTGTCTTTTTAGATGGCACAGTAGAATCCACCA...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GACTGCTTTCCCAGTCCTCAGCACCATCTTGAGAGAGGAAGGAATAAAACCTCTTCCCTTCCTTGGTCTTaGATACGATGGGAACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DCFPSPQHHLERGRNKTSSLPWS*IRWEQN Trigger: GTTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGA...AGAGGTTTTATTCCTTCCTCTCTCAAGATGGTGCTGAGGACTGGGAAAGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GACTGCTTTCCCAGTCCTCAGCACCATCTTGAGAGAGGAAGGAATAAAACCTCTGGTATTTCCCTTCCTTaGTCTTGGATACGATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DCFPSPQHHLERGRNKTSGISLP*SWIRWE Trigger: TTCCCATCGTATCCAAGACCAAGGAAGGGAAATACC...AGAGGTTTTATTCCTTCCTCTCTCAAGATGGTGCTGAGGACTGGGAAAGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCAGAACGCCCAAATATGTaGGTGACAAACCATCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPLEDVGMAFRDKKAAAERPNM*VTNHLR Trigger: TCGAAGATGGTTTGTCACTCACATATTTGGGCGTTC...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCATTGTCAGTGGGGAAATaGAGAACAAATTTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALYVIVGGSDPGLHACAALSVGK*RTNFHC Trigger: GCAATGAAAATTTGTTCTTCATTTCCCCACTGACAA...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCAGTGGTAGATTGTCAGTaGGGAAATGAAGAACAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ALYVIVGGSDPGLHACAAVVDCQ*GNEEQI Trigger: AATTTGTTCTTCATTTCCCCACTGACAATCTACCAC...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TATCTCGTTCCTTTCTCCTTCATACCTAGAATTGCAGTTCAACCACTAGGCAGAGGCAGGTTGCACTGGTaGATTCTACTGTGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: YLVPFSFIPRIAVQPLGRGRLHW*ILLCHL Trigger: TAGATGGCACAGTAGAATCCACCAGTGCAACCTGCC...TCTGCCTAGTGGTTGAACTGCAATTCTAGGTATGAAGGAGAAAGGAACGAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | CCTAGAATTGCAGTTCAACCACTAGGCAGAGAAACACAAGAACCATTCGGTGTTTGGTCTTGGATACGATaGGAACAAAACGGTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRIAVQPLGRETQEPFGVWSWIR*EQNGNP Trigger: GGGGTTACCGTTTTGTTCCCATCGTATCCAAGACCA...AACACCGAATGGTTCTTGTGTTTCTCTGCCTAGTGGTTGAACTGCAATTCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 72 bp | AGAGCCTTTAGTGATTCTGTGTATGACAGGCTCTTATaGTCAGTGACTGGTTGGCTCACTTCCCAACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAFSDSVYDRLL*SVTGWLTSQLR Trigger: TCTGAGTTGGGAAGTGAGCCAACCAGTCACTGACAATAAGAGCCTGTCATACACAGAATCACTAAAGGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCCTTCACCTTATTTTTGTAGTCTCTCCCTGAACTGGTACCTCACCCATAGAAAACAGAAAGGCTaGTGTCATGCCATTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PAPSPYFCSLSLNWYLTHRKQKG*CHAINV Trigger: AACATTAATGGCATGACATCAGCCTTTCTGTTTTCT...ATGGGTGAGGTACCAGTTCAGGGAGAGACTACAAAAATAAGGTGAAGGGGCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAAAGTACGGTTGTCAGGTaGGTAGAACTCTGGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: VIDSYEVLCQEPNLGSLESTVVR*VELWEI Trigger: GATCTCCCAGAGTTCTACCCACCTGACAACCGTACT...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | TATCTCGTTCCTTTCTCCTTCATACCTAGAATTGCAGTTCAACCACTAGGCAGACATTATAGAGGCACATaGCACAATGAGGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLVPFSFIPRIAVQPLGRHYRGT*HNEGSP Trigger: TGGAGACCCCTCATTGTGCCATGTGCCTCTATAATG...TCTGCCTAGTGGTTGAACTGCAATTCTAGGTATGAAGGAGAAAGGAACGAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 72 bp | CCTATATGGGCTGCAGCGTCTGAGTTAGTTATGAAATaGGTTGAGGCTTTCTGTTCTTCTGTACCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIWAAASELVMK*VEAFCSSVPWV Trigger: AACCCAAGGTACAGAAGAACAGAAAGCCTCAACCAATTTCATAACTAACTCAGACGCTGCAGCCCATATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCATGGTGGATTCTACTGTaGCATCTAAAAAGACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LFPLEDVGMAFRDKKAAAWWILL*HLKRQP Trigger: TGGTTGTCTTTTTAGATGGCACAGTAGAATCCACCA...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | CTAACTTTTCTCCAGTACATGTCAATGGATGACTTTGTTTCCATCAACACTGTAGTTTCTGCCGCCATGTaGAAGAAAGGGCTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTFLQYMSMDDFVSINTVVSAAM*KKGLLW Trigger: CCACAACAGCCCTTTCTTCCACATGGCGGCAGAAAC...TACAGTGTTGATGGAAACAAAGTCATCCATTGACATGTACTGGAGAAAAGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAACATTATAGAGGCACATaGCACAATGAGGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEHYRGT*HNEGSP Trigger: TGGAGACCCCTCATTGTGCCATGTGCCTCTATAATG...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| 3UTR CAA 72 bp | TCCTCCGAAGTAAATTCTCCTGCTAACTTGTTCCCTTaGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSEVNSPANLFP*EDVGMAFRDKK Trigger: TTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAAGTTAGCAGGAGAATTTACTTCGGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCAAGAAAACAGAAAGGCTaGTGTCATGCCATTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFPLEDVGMAFRDKKAAARKQKG*CHAINV Trigger: AACATTAATGGCATGACATCAGCCTTTCTGTTTTCT...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR TCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAAGTTCTGTCACAAACCTaGATCCGTAACCTATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEVLSQT*IRNLWS Trigger: TGACCATAGGTTACGGATTCAGGTTTGTGACAGAAC...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAATACACCTTCCATCTTTaGAGACCAACCTTGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEYTFHL*RPTLLV Trigger: AACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTA...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR GCA 90 bp | TATCTCGTTCCTTTCTCCTTCATACCTAGAATTGCAGTTCAACCACTAGGCAGATATAAACCTCGACTGTaGATCTACATTGCCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: YLVPFSFIPRIAVQPLGRYKPRL*IYIAKL Trigger: GAGTTTGGCAATGTAGATGCACAGTCGAGGTTTATA...TCTGCCTAGTGGTTGAACTGCAATTCTAGGTATGAAGGAGAAAGGAACGAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | CTAACTTTTCTCCAGTACATGTCAATGGATGACTTTGTTTCCATCAACACTGTAGGTATTTCCCTTCCTTaGTCTTGGATACGATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTFLQYMSMDDFVSINTVGISLP*SWIRWE Trigger: TTCCCATCGTATCCAAGACCAAGGAAGGGAAATACC...TACAGTGTTGATGGAAACAAAGTCATCCATTGACATGTACTGGAGAAAAGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAAGTGGTAGATTGTCAGTaGGGAAATGAAGAACAAATT | + |
|
Preference number: 4 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEVVDCQ*GNEEQI Trigger: AATTTGTTCTTCATTTCCCCACTGACAATCTACCAC...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CCA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAAGTCTTACCAAAGTTATaGAAATCCACTCGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEVLPKL*KSTRYF Trigger: GAAATACCGAGTGGATTTCCATAACTTTGGTAAGAC...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCGGTATTTCCCTTCCTaGGTCTTGGATACGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLLYLGLRKVQSLDAHLTRYFPS*VLDTMG Trigger: TCCCATCGTATCCAAGACCAAGGAAGGGAAATACCG...GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS CCA 90 bp | AATGTTCTCCACACAAGGAGTACGGTTGTCAGGTGGGTAGAACTCTaGGAGATCCTTATGAACATAGGCTACGACATACCACAGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: NVLHTRSTVVRWVEL*EILMNIGYDIPQET Trigger: GGTCTCCTGTGGTATGTCGTAGCCTATGTTCATAAGGATCTCCCAGAGTTCTACCCACCTGACAACCGTACTCCTTGTGTGGAGAACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 90 bp | CCTCTTCTGGGATGTATGATGTGCGGACTTGGCAGGTTGCACTGGTaGATTCTACTGTGCCATCTAAAAAGACAACCAACTCGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLLGCMMCGLGRLHW*ILLCHLKRQPTRSP Trigger: AGGACTTCGAGTTGGTTGTCTTTTTAGATGGCACAGTAGAATCCACCAGTGCAACCTGCCAAGTCCGCACATCATACATCCCAGAAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 90 bp | GCACCTCTTCTGGGATGTATGATGTGCGGACTTGGCAGGTTGCACTaGTGGATTCTACTGTGCCATCTAAAAAGACAACCAACTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: APLLGCMMCGLGRLH*WILLCHLKRQPTRS Trigger: ACTTCGAGTTGGTTGTCTTTTTAGATGGCACAGTAGAATCCACCAGTGCAACCTGCCAAGTCCGCACATCATACATCCCAGAAGAGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 90 bp | CTCTCTTCATCCTGGCCCTGGCATCTTTCTCATTATAGAGGCACATaGCACAATGAGGGGTCTCCACTTCCACCGTCTTACCAAAGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSWPWHLSHYRGT*HNEGSPLPPSYQSY Trigger: ATAACTTTGGTAAGACGGTGGAAGTGGAGACCCCTCATTGTGCCATGTGCCTCTATAATGAGAAAGATGCCAGGGCCAGGATGAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCCTCAGGTCAAGTACAGTaGTCCAGATATCCACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSVPWVEKGAVTGCPPYPSGQVQ*SRYPQR Trigger: TCTTTGTGGATATCTGGACAACTGTACTTGACCTGA...GGGGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS CCA 90 bp | ACTGTGCATCTACATTGCCAAACTCGATGTTACACCTTCCATCTTTaGAGACCAACCTTGCTCGTTGCCGAGAACGCCCAAATATGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVHLHCQTRCYTFHL*RPTLLVAENAQICE Trigger: CTCACATATTTGGGCGTTCTCGGCAACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTAACATCGAGTTTGGCAATGTAGATGCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 90 bp | GATTCTACTGTGCCATCTAAAAAGACAACCAACTCGAAGTCCTGTTaGGAAAGAGTTTCTGCCGCCATGTGGAAGAAAGGGCTGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSTVPSKKTTNSKSC*ERVSAAMWKKGLLW Trigger: CCACAACAGCCCTTTCTTCCACATGGCGGCAGAAACTCTTTCCCAACAGGACTTCGAGTTGGTTGTCTTTTTAGATGGCACAGTAGAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACCCTGATCACCGCATTCTaGCTGAATGTAATGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLLYLGLRKVQSLDAHLTLITAF*LNVMVF Trigger: AAAGACCATTACATTCAGCAAGAATGCGGTGATCAG...GGTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CAA 90 bp | GCTTTGTATGTGATTGTTGGAGGTTCAGACCCAGGTCTTCATGCGTGCGCAGCACTGATCACCGCATTCTaGCTGAATGTAATGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALYVIVGGSDPGLHACAALITAF*LNVMVF Trigger: AAAGACCATTACATTCAGCAAGAATGCGGTGATCAG...TGCTGCGCACGCATGAAGACCTGGGTCTGAACCTCCAACAATCACATACAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CAA 90 bp | CCTAGAATTGCAGTTCAACCACTAGGCAGAGAAACACAAGAACCATTCGGTGTTCAACTCGAAGTCCTGTaGGGAAAGAGTTTCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRIAVQPLGRETQEPFGVQLEVL*GKSFCR Trigger: GCGGCAGAAACTCTTTCCCAACAGGACTTCGAGTTG...AACACCGAATGGTTCTTGTGTTTCTCTGCCTAGTGGTTGAACTGCAATTCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCTTCACCTTATTTTTGTAGTCTCTCCCTGAACTGGTACCTCACCCATTTCCCTTCCTTGGTCTaGGATACGATGGGAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAPSPYFCSLSLNWYLTHFPSLV*DTMGTK Trigger: TTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGAA...ATGGGTGAGGTACCAGTTCAGGGAGAGACTACAAAAATAAGGTGAAGGGGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS GCA 90 bp | ATTGCCAAACTCGATGTTACACCTTCCATCTTTGGAGACCAACCTTaGTCGTTGCCGAGAACGCCCAAATATGTGAGTGACAAACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: IAKLDVTPSIFGDQP*SLPRTPKYVSDKPS Trigger: AGATGGTTTGTCACTCACATATTTGGGCGTTCTCGGCAACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTAACATCGAGTTTGGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 90 bp | TATGGAAATCCACTCGGTATTTCCCTTCCTTGGTCTTGGATACGATaGGAACAAAACGGTAACCCCAAAGCACCTCTTCTGGGATGTATG | + |
|
Preference number: 5 (lower is better) Translates to: YGNPLGISLPWSWIR*EQNGNPKAPLLGCM Trigger: CATACATCCCAGAAGAGGTGCTTTGGGGTTACCGTTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGAAATACCGAGTGGATTTCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 90 bp | CCGTCTTACCAAAGTTATGGAAATCCACTCGGTATTTCCCTTCCTTaGTCTTGGATACGATGGGAACAAAACGGTAACCCCAAAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PSYQSYGNPLGISLP*SWIRWEQNGNPKAP Trigger: AGGTGCTTTGGGGTTACCGTTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGAAATACCGAGTGGATTTCCATAACTTTGGTAAGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCATTACACCTTCCATCTTaGGAGACCAACCTTGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LFPLEDVGMAFRDKKAAALHLPS*ETNLAR Trigger: ACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTAA...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CAA 90 bp | TGTTCTTCTGTACCTTGGGTTGAGAAAGGTGCAGTCACTGGATGCCCACCTTACTCAGGTCAAGTACAGTaGTCCAGATATCCACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSSVPWVEKGAVTGCPPYSGQVQ*SRYPQR Trigger: TCTTTGTGGATATCTGGACAACTGTACTTGACCTGA...GTAAGGTGGGCATCCAGTGACTGCACCTTTCTCAACCCAAGGTACAGAAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS TCA 90 bp | TCTTTGGAGACCAACCTTGCTCGTTGCCGAGAACGCCCAAATATGTaGGTGACAAACCATCTTCGAAGATGTTTGAACATCCTTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLETNLARCRERPNM*VTNHLRRCLNILSV Trigger: GACAGAAAGGATGTTCAAACATCTTCGAAGATGGTTTGTCACTCACATATTTGGGCGTTCTCGGCAACGAGCAAGGTTGGTCTCCAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172015.3 |
||
| CDS CCA 90 bp | TGTCATGCCATTAATGTTCTCCACACAAGGAGTACGGTTGTCAGGTaGGTAGAACTCTGGGAGATCCTTATGAACATAGGCTACGACATA | + |
|
Preference number: 5 (lower is better) Translates to: CHAINVLHTRSTVVR*VELWEILMNIGYDI Trigger: TATGTCGTAGCCTATGTTCATAAGGATCTCCCAGAGTTCTACCCACCTGACAACCGTACTCCTTGTGTGGAGAACATTAATGGCATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 90 bp | TACCAAAGTTATGGAAATCCACTCGGTATTTCCCTTCCTTGGTCTTaGATACGATGGGAACAAAACGGTAACCCCAAAGCACCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YQSYGNPLGISLPWS*IRWEQNGNPKAPLL Trigger: CAGAAGAGGTGCTTTGGGGTTACCGTTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGAAATACCGAGTGGATTTCCATAACTTTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS-3UTR CAA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAACAACTCGAAGTCCTGTaGGGAAAGAGTTTCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEQLEVL*GKSFCR Trigger: GCGGCAGAAACTCTTTCCCAACAGGACTTCGAGTTG...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CAA 90 bp | TATCTCGTTCCTTTCTCCTTCATACCTAGAATTGCAGTTCAACCACTAGGCAGATTACACCTTCCATCTTaGGAGACCAACCTTGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: YLVPFSFIPRIAVQPLGRLHLPS*ETNLAR Trigger: ACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTAA...TCTGCCTAGTGGTTGAACTGCAATTCTAGGTATGAAGGAGAAAGGAACGAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CAA 90 bp | GCGCAGCATGAACTTACAAAGAATGTCATCTCTTCAGCCTCTTCACCAACACTTGTCTTTGCACGTTTTTaGGGTCTAGAGATCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AQHELTKNVISSASSPTLVFARF*GLEILA Trigger: AGCCAAGATCTCTAGACCCAAAAAACGTGCAAAGAC...AAGTGTTGGTGAAGAGGCTGAAGAGATGACATTCTTTGTAAGTTCATGCTGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS TCA 90 bp | TCTCCTTCAGGTGTGATGGTAGTCTTCAGAAGCTTACCATATATGTaGCTGCCAATCAGAAGGCTTTTCCTAAGATTTGCTACTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPSGVMVVFRSLPYM*LPIRRLFLRFATRM Trigger: CATCCGAGTAGCAAATCTTAGGAAAAGCCTTCTGATTGGCAGTCACATATATGGTAAGCTTCTGAAGACTACCATCACACCTGAAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCCCTTTGGAAGATGTAGGGATGGCCTTTAGAGACAAGAAAGCAGCAGCACATCTTCGAAGATGTTaGAACATCCTTTCTGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFPLEDVGMAFRDKKAAAHLRRC*NILSVS Trigger: ACTGACAGAAAGGATGTTCAAACATCTTCGAAGATG...TGCTGCTGCTTTCTTGTCTCTAAAGGCCATCCCTACATCTTCCAAAGGGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172015.3 |
||
| CDS CCA 90 bp | ATGGCACCACACATGAAAGAATTGATGATCACTCCAAGAATAGACTaGAAGATAAGCAGAAAAATGGCAGTGGCACACTGTTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MAPHMKELMITPRID*KISRKMAVAHCSVT Trigger: TGTGACAGAACAGTGTGCCACTGCCATTTTTCTGCTTATCTTCCAGTCTATTCTTGGAGTGATCATCAATTCTTTCATGTGTGGTGCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS-3UTR CAA 90 bp | GTTATAGATAGTTATGAAGTACTGTGCCAGGAACCAAACCTAGGTTCTCTGGAATTCCCTTCCTTGGTCTaGGATACGATGGGAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VIDSYEVLCQEPNLGSLEFPSLV*DTMGTK Trigger: TTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGAA...TTCCAGAGAACCTAGGTTTGGTTCCTGGCACAGTACTTCATAACTATCTATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS-3UTR CAA 90 bp | CTAACTTTTCTCCAGTACATGTCAATGGATGACTTTGTTTCCATCAACACTGTACGGTATTTCCCTTCCTaGGTCTTGGATACGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LTFLQYMSMDDFVSINTVRYFPS*VLDTMG Trigger: TCCCATCGTATCCAAGACCAAGGAAGGGAAATACCG...TACAGTGTTGATGGAAACAAAGTCATCCATTGACATGTACTGGAGAAAAGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 |
||
| CDS CCA 90 bp | GTGGAAGAAAGGGCTGTTGTGGTCAATAATGTGGTAGATTGTCAGTaGGGAAATGAAGAACAAATTTTCATTGCCAGCATCAACTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VEERAVVVNNVVDCQ*GNEEQIFIASINYK Trigger: TTTGTAGTTGATGCTGGCAATGAAAATTTGTTCTTCATTTCCCCACTGACAATCTACCACATTATTGACCACAACAGCCCTTTCTTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS TCA 90 bp | AACAAATTTTCATTGCCAGCATCAACTACAAAGTTTATATTGGTCTaGTCCAAAATAATGGTCTCTCCTTCAGGTGTGATGGTAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKFSLPASTTKFILV*SKIMVSPSGVMVVF Trigger: GAAGACTACCATCACACCTGAAGGAGAGACCATTATTTTGGATCAGACCAATATAAACTTTGTAGTTGATGCTGGCAATGAAAATTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 72 bp | TCCTGGCCCTGGCATCTTTCTCATTATAGAGGCACATaGCACAATGAGGGGTCTCCACTTCCACCGTCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SWPWHLSHYRGT*HNEGSPLPPSY Trigger: GTAAGACGGTGGAAGTGGAGACCCCTCATTGTGCCATGTGCCTCTATAATGAGAAAGATGCCAGGGCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS GCA 72 bp | CTCGATGTTACACCTTCCATCTTTGGAGACCAACCTTaGTCGTTGCCGAGAACGCCCAAATATGTGAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LDVTPSIFGDQP*SLPRTPKYVSD Trigger: GTCACTCACATATTTGGGCGTTCTCGGCAACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTAACATCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 72 bp | CCACTCGGTATTTCCCTTCCTTGGTCTTGGATACGATaGGAACAAAACGGTAACCCCAAAGCACCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLGISLPWSWIR*EQNGNPKAPLL Trigger: CAGAAGAGGTGCTTTGGGGTTACCGTTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGAAATACCGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS GCA 72 bp | CCATCTTCGAAGATGTTTGAACATCCTTTCTGTCAGTaGCCTGATCAGCACTCTGCACATACACCTCCGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSSKMFEHPFCQ*PDQHSAHTPPI Trigger: GATCGGAGGTGTATGTGCAGAGTGCTGATCAGGGCACTGACAGAAAGGATGTTCAAACATCTTCGAAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172015.3 |
||
| CDS CCA 72 bp | CTGGGATGTATGATGTGCGGACTTGGCAGGTTGCACTaGTGGATTCTACTGTGCCATCTAAAAAGACAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LGCMMCGLGRLH*WILLCHLKRQP Trigger: TGGTTGTCTTTTTAGATGGCACAGTAGAATCCACCAGTGCAACCTGCCAAGTCCGCACATCATACATCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CAA 72 bp | GTTACACCTTCCATCTTTGGAGACCAACCTTGCTCGTaGCCGAGAACGCCCAAATATGTGAGTGACAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: VTPSIFGDQPCS*PRTPKYVSDKP Trigger: TGGTTTGTCACTCACATATTTGGGCGTTCTCGGCAACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CAA 90 bp | AAACTCGATGTTACACCTTCCATCTTTGGAGACCAACCTTGCTCGTaGCCGAGAACGCCCAAATATGTGAGTGACAAACCATCTTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KLDVTPSIFGDQPCS*PRTPKYVSDKPSSK Trigger: CTTCGAAGATGGTTTGTCACTCACATATTTGGGCGTTCTCGGCAACGAGCAAGGTTGGTCTCCAAAGATGGAAGGTGTAACATCGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS TCA 72 bp | GAAAAATGGCAGTGGCACACTGTTCTGTCACAAACCTaGATCCGTAACCTATGGTCACTTGGGTCTCTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EKWQWHTVLSQT*IRNLWSLGSLE Trigger: CTCTAGAGACCCAAGTGACCATAGGTTACGGATTCAGGTTTGTGACAGAACAGTGTGCCACTGCCATTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CAA 72 bp | CAACTCCCCAAGAAGGCTGTGATGAACACGGTCATTTaGTACCTCCATTTCAGGTCAAGTACAGTTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLPKKAVMNTVI*YLHFRSSTVVQ Trigger: CTGGACAACTGTACTTGACCTGAAATGGAGGTACAAAATGACCGTGTTCATCACAGCCTTCTTGGGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS TCA 72 bp | ACCAACCTTGCTCGTTGCCGAGAACGCCCAAATATGTaGGTGACAAACCATCTTCGAAGATGTTTGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: TNLARCRERPNM*VTNHLRRCLNI Trigger: GATGTTCAAACATCTTCGAAGATGGTTTGTCACTCACATATTTGGGCGTTCTCGGCAACGAGCAAGGTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172015.3 |
||
| CDS CCA 72 bp | ATTAATGTTCTCCACACAAGGAGTACGGTTGTCAGGTaGGTAGAACTCTGGGAGATCCTTATGAACATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: INVLHTRSTVVR*VELWEILMNIG Trigger: GCCTATGTTCATAAGGATCTCCCAGAGTTCTACCCACCTGACAACCGTACTCCTTGTGTGGAGAACATTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 72 bp | TATGGAAATCCACTCGGTATTTCCCTTCCTTGGTCTTaGATACGATGGGAACAAAACGGTAACCCCAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YGNPLGISLPWS*IRWEQNGNPKA Trigger: TGCTTTGGGGTTACCGTTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGAAATACCGAGTGGATTTCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 72 bp | CAAAGTTATGGAAATCCACTCGGTATTTCCCTTCCTTaGTCTTGGATACGATGGGAACAAAACGGTAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: QSYGNPLGISLP*SWIRWEQNGNP Trigger: GGGGTTACCGTTTTGTTCCCATCGTATCCAAGACCAAGGAAGGGAAATACCGAGTGGATTTCCATAACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CAA 90 bp | AAGAGAAACCAACTCCCCAAGAAGGCTGTGATGAACACGGTCATTTaGTACCTCCATTTCAGGTCAAGTACAGTTGTCCAGATATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: KRNQLPKKAVMNTVI*YLHFRSSTVVQIST Trigger: TGTGGATATCTGGACAACTGTACTTGACCTGAAATGGAGGTACAAAATGACCGTGTTCATCACAGCCTTCTTGGGGAGTTGGTTTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CAA 72 bp | GCATTCTTGCTGAATGTAATGGTCTTTGCACGTTTTTaGGGTCTAGAGATCTTGGCTAATATGGCACCACAC | + |
|
Preference number: 6 (lower is better) Translates to: AFLLNVMVFARF*GLEILANMAPH Trigger: GTGTGGTGCCATATTAGCCAAGATCTCTAGACCCAAAAAACGTGCAAAGACCATTACATTCAGCAAGAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CAA 90 bp | GTCCAGATATCCACAAAGAATATAAACCTCGACTGTGCATCTACATaGCCAAACTCGATGTTACACCTTCCATCTTTGGAGACCAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: VQISTKNINLDCAST*PNSMLHLPSLETNL Trigger: AAGGTTGGTCTCCAAAGATGGAAGGTGTAACATCGAGTTTGGCAATGTAGATGCACAGTCGAGGTTTATATTCTTTGTGGATATCTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CAA 90 bp | CTGATCACCGCATTCTTGCTGAATGTAATGGTCTTTGCACGTTTTTaGGGTCTAGAGATCTTGGCTAATATGGCACCACACATGAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LITAFLLNVMVFARF*GLEILANMAPHMKE Trigger: TTCTTTCATGTGTGGTGCCATATTAGCCAAGATCTCTAGACCCAAAAAACGTGCAAAGACCATTACATTCAGCAAGAATGCGGTGATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS TCA 72 bp | GGTGTGATGGTAGTCTTCAGAAGCTTACCATATATGTaGCTGCCAATCAGAAGGCTTTTCCTAAGATTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GVMVVFRSLPYM*LPIRRLFLRFA Trigger: AGCAAATCTTAGGAAAAGCCTTCTGATTGGCAGTCACATATATGGTAAGCTTCTGAAGACTACCATCACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CCA 72 bp | AGGGCTGTTGTGGTCAATAATGTGGTAGATTGTCAGTaGGGAAATGAAGAACAAATTTTCATTGCCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RAVVVNNVVDCQ*GNEEQIFIASI Trigger: GATGCTGGCAATGAAAATTTGTTCTTCATTTCCCCACTGACAATCTACCACATTATTGACCACAACAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||
| CDS CAA 72 bp | TCCACAAAGAATATAAACCTCGACTGTGCATCTACATaGCCAAACTCGATGTTACACCTTCCATCTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: STKNINLDCAST*PNSMLHLPSLE Trigger: CTCCAAAGATGGAAGGTGTAACATCGAGTTTGGCAATGTAGATGCACAGTCGAGGTTTATATTCTTTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047334.10 ENSMUST00000172015.3 ENSMUST00000213393.2 |
||