Pregenerated sensors for KCNIP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079056Ensembl transcript IDs: ENSMUST00000028850.15, ENSMUST00000088538.6, ENSMUST00000103215.11
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTaGAAAGGGGACAGACCCCTCCAGGTTGGGCGTGCAGCCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: RETLLPCGHAASLCP*KGDRPLQVGRAARG Trigger: GCCTCTGGCTGCACGCCCAACCTGGAGGGGTCTGTCCCCTTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR GCA 90 bp | CCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATaGGGCCAGTCTGTGTCCCTGCAAAGGGGACAGACCCCTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PFQAAPKGDASAMRT*GQSVSLQRGQTPPG Trigger: ACCTGGAGGGGTCTGTCCCCTTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR TCA 90 bp | GGCTCCGAGGTACAGGATGGATGTCTGAGCGTCTTCCTCGGCCACTaGATCAGGGCTGCAGGGACCCAGGCCTTCCCTTGTGGGCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: GSEVQDGCLSVFLGH*IRAAGTQAFPCGLG Trigger: GCCAAGCCCACAAGGGAAGGCCTGGGTCCCTGCAGCCCTGATTCAGTGGCCGAGGAAGACGCTCAGACATCCATCCTGTACCTCGGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR GCA 90 bp | AGGAACCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATaGGGACATGCGGCCAGTCTGTGTCCCTGCAAAGGGGACAGACCC | + |
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Preference number: 1 (lower is better) Translates to: RNHPSRLHPRETLLP*GHAASLCPCKGDRP Trigger: GGGTCTGTCCCCTTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGGTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR GCA 90 bp | GAGACAGGAACCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTaGCATGCGGACATGCGGCCAGTCTGTGTCCCTGCAAAGGGGACA | + |
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Preference number: 1 (lower is better) Translates to: ETGTTLPGCTQGRRF*HADMRPVCVPAKGT Trigger: TGTCCCCTTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGGTTCCTGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR CCA 90 bp | GGCTGGGAAAGGGCTGTGAGACCCCCAAGGCTCCGAGGTACAGGATaGATGTCTGAGCGTCTTCCTCGGCCACTGAATCAGGGCTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: GWERAVRPPRLRGTG*MSERLPRPLNQGCR Trigger: CCTGCAGCCCTGATTCAGTGGCCGAGGAAGACGCTCAGACATCCATCCTGTACCTCGGAGCCTTGGGGGTCTCACAGCCCTTTCCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR GCA 90 bp | GGGACAGACCCCTCCAGGTTGGGCGTGCAGCCAGAGGCTAAGGGATaGAGCAGGTTAGAGTGGTGGCCTTTTCCCGTGGCCTTGGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: GTDPSRLGVQPEAKG*SRLEWWPFPVALAF Trigger: AAAAGCCAAGGCCACGGGAAAAGGCCACCACTCTAACCTGCTGCATCCCTTAGCCTCTGGCTGCACGCCCAACCTGGAGGGGTCTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR TCA 90 bp | GGTTTGTGCTTTAGAATGTTGGCGAGCTGGGCTGGGAAAGGGCTGTaGGACCCCCAAGGCTCCGAGGTACAGGATGGATGTCTGAGCGTC | + |
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Preference number: 1 (lower is better) Translates to: GLCFRMLASWAGKGL*DPQGSEVQDGCLSV Trigger: GACGCTCAGACATCCATCCTGTACCTCGGAGCCTTGGGGGTCTCACAGCCCTTTCCCAGCCCAGCTCGCCAACATTCTAAAGCACAAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR CCA 90 bp | CTCCCCAGGGAATCAAAGAGGACCTTGGAGAGGCCATCCTGGTGCTaGAAGTTGGGAAATCTCCACCAGCCACATTCCCACTGGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LPRESKRTLERPSWC*KLGNLHQPHSHWPA Trigger: TGCTGGCCAGTGGGAATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR GCA 90 bp | GATCTCCCCAGGGAATCAAAGAGGACCTTGGAGAGGCCATCCTGGTaGTGGAAGTTGGGAAATCTCCACCAGCCACATTCCCACTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: DLPRESKRTLERPSW*WKLGNLHQPHSHWP Trigger: TGGCCAGTGGGAATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCTGGGGAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR CCA 90 bp | GGTGATCTCCCCAGGGAATCAAAGAGGACCTTGGAGAGGCCATCCTaGTGCTGGAAGTTGGGAAATCTCCACCAGCCACATTCCCACTGG | + |
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Preference number: 1 (lower is better) Translates to: GDLPRESKRTLERPS*CWKLGNLHQPHSHW Trigger: CCAGTGGGAATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCTGGGGAGATCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR CCA 90 bp | ATTGACCTAGGAATAGGCGGGGGTGCCTTCTGGCTGCCACTTCCTTaGCCAAGCCAGAGGAACCATGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: IDLGIGGGAFWLPLP*PSQRNHVCVCVCVC Trigger: ACACACACACACACACACACACACATGGTTCCTCTGGCTTGGCCAAGGAAGTGGCAGCCAGAAGGCACCCCCGCCTATTCCTAGGTCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR CCA 90 bp | GGGAATCAAAGAGGACCTTGGAGAGGCCATCCTGGTGCTGGAAGTTaGGAAATCTCCACCAGCCACATTCCCACTGGCCAGCAGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: GNQRGPWRGHPGAGS*EISTSHIPTGQQSS Trigger: TGAAGACTGCTGGCCAGTGGGAATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR CCA 90 bp | CAGTCTATGAGCCAGGTGATCTCCCCAGGGAATCAAAGAGGACCTTaGAGAGGCCATCCTGGTGCTGGAAGTTGGGAAATCTCCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: QSMSQVISPGNQRGP*RGHPGAGSWEISTS Trigger: GCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCTGGGGAGATCACCTGGCTCATAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR GCA 90 bp | GGTATGGACAAATTGTTTCCTCAGTTTCTCCAAAAACCTCAATCCTaGCCCACTCTTACAGGAGGTCTTAGTCCAATGGCCCCTCACTAT | + |
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Preference number: 1 (lower is better) Translates to: GMDKLFPQFLQKPQS*PTLTGGLSPMAPHY Trigger: ATAGTGAGGGGCCATTGGACTAAGACCTCCTGTAAGAGTGGGGCAGGATTGAGGTTTTTGGAGAAACTGAGGAAACAATTTGTCCATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR GCA 90 bp | CCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCGGGGTGCCTTCTGGCTaGCACTTCCTTGGCCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: PPFQAAPKGDASAMRTCGGVPSG*HFLGQA Trigger: GGCTTGGCCAAGGAAGTGGCAGCCAGAAGGCACCCC...GCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGACCCCTCCAGGTTaGGCGTGCAGCCAGAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: PPFQAAPKGDASAMRTCGQTPPG*ACSQRL Trigger: TAGCCTCTGGCTGCACGCCCAACCTGGAGGGGTCTG...GCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR GCA 90 bp | CCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCCTCCAGGTTGGGCGTaGAGCCAGAGGCTAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: PPFQAAPKGDASAMRTCGPPGWA*SQRLRD Trigger: ATCCCTTAGCCTCTGGCTGCACGCCCAACCTGGAGG...GCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCAGACAGGGACCTCGATaGGAAGAGTCAGACTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PPFQAAPKGDASAMRTCGRQGPR*EESDWG Trigger: CCCCCAGTCTGACTCTTCCCATCGAGGTCCCTGTCT...GCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR CAA 90 bp | ATGCGGCCAGTCTGTGTCCCTGCAAAGGGGACAGACCCCTCCAGGTaGGGCGTGCAGCCAGAGGCTAAGGGATGCAGCAGGTTAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: MRPVCVPAKGTDPSR*GVQPEAKGCSRLEW Trigger: CCACTCTAACCTGCTGCATCCCTTAGCCTCTGGCTGCACGCCCAACCTGGAGGGGTCTGTCCCCTTTGCAGGGACACAGACTGGCCGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR TCA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGGCTGGGAAAGGGCTGTaGGACCCCCAAGGCTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: DLPYLGAGLLGNTRGLSEAGKGL*DPQGSE Trigger: CTCGGAGCCTTGGGGGTCTCACAGCCCTTTCCCAGC...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTGCAAACTCCTGAGGGTCTGCTaGCCTGTTGCCTGGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: PRETLLPCGHAASLCPCKLLRVC*PVAWSQ Trigger: CTGTGACCAGGCAACAGGTCAGCAGACCCTCAGGAG...TTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTGCAAAGAACTGGGTGGCAAGTaGCCAGGGAAAAGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PRETLLPCGHAASLCPCKELGGK*PGKRRG Trigger: CCCCCTCCTTTTCCCTGGCCACTTGCCACCCAGTTC...TTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCAGGAATAGGCGGGGGTaGCTTCTGGCTGCCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: SSLGLTVAFNPQGAAQASRNRRG*LLAATS Trigger: GGAAGTGGCAGCCAGAAGGCACCCCCGCCTATTCCT...GCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGCTTCTGGGCGAGGCCTaGGGAGGCAGGAACAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: DLPYLGAGLLGNTRGLSELLGEA*GGRNSS Trigger: AGAGCTGTTCCTGCCTCCCCAGGCCTCGCCCAGAAG...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | CGATCCACTGTGTTAAGGAACTGGGTGGCAAGTGGCCAGGGAAAAGGAGGGGGAACATCTAGCCAGGGCTaGCCATCCCAGAGGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RSTVLRNWVASGQGKGGGTSSQG*PSQRQP Trigger: AGGCTGCCTCTGGGATGGCCAGCCCTGGCTAGATGT...TCCCCCTCCTTTTCCCTGGCCACTTGCCACCCAGTTCCTTAACACAGTGGATCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | GACCTTGGAGAGGCCATCCTGGTGCTGGAAGTTGGGAAATCTCCACCAGCCACAACATCTAGCCAGGGCTaGCCATCCCAGAGGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: DLGEAILVLEVGKSPPATTSSQG*PSQRQP Trigger: AGGCTGCCTCTGGGATGGCCAGCCCTGGCTAGATGT...TGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTGGACACTGTTCCTTCTaGGCGAGGCCTGGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSGHCSF*ARPGEA Trigger: TGCCTCCCCAGGCCTCGCCCAGAAGGAACAGTGTCC...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR TCA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGGAGGCTTCTCTGGGTTaGGAAGCAATGACCACCGGG | + |
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Preference number: 2 (lower is better) Translates to: DLPYLGAGLLGNTRGLSEEASLG*EAMTTG Trigger: CCCGGTGGTCATTGCTTCTCAACCCAGAGAAGCCTC...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTGGTCTGCTGACCTGTTaGCTGGTCACAGGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSGLLTC*LVTGPQ Trigger: CTGGGGACCTGTGACCAGGCAACAGGTCAGCAGACC...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTGCAAAAGGCCATCCTGGTGCTaGAAGTTGGGAAATCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: PRETLLPCGHAASLCPCKRPSWC*KLGNLH Trigger: GTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCT...TTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCAGACTGAACTGGGTGGCAAGTaGCCAGGGAAAAGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SRGLGFSQDRDLDGKSQTELGGK*PGKRRG Trigger: CCCCCTCCTTTTCCCTGGCCACTTGCCACCCAGTTC...AGTCTGACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR GCA 90 bp | CACCTGTGTATAGGGGTGTTGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATGGGGTGCCTTCTGGCTaGCACTTCCTTGGCCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: HLCIGVLSPCPSSKDLPYGVPSG*HFLGQA Trigger: GGCTTGGCCAAGGAAGTGGCAGCCAGAAGGCACCCC...ATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACAACACCCCTATACACAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTGCAAATTCAGCCCAGTTCCCTaGTTGTCAGTCTATGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PRETLLPCGHAASLCPCKFSPVP*LSVYEP Trigger: TGGCTCATAGACTGACAACCAGGGAACTGGGCTGAA...TTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTGGACCTCCCTTATCTTaGGGCTGGCCTTCTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSGPPLS*GWPSGE Trigger: TTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTCC...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR CAA 90 bp | AGGGAATCAAAGAGGACCTTGGAGAGGCCATCCTGGTGCTGGAAGTaGGGAAATCTCCACCAGCCACATTCCCACTGGCCAGCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RESKRTLERPSWCWK*GNLHQPHSHWPAVF Trigger: GAAGACTGCTGGCCAGTGGGAATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR GCA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGGAGAGGCCATCCTGGTaGTGGAAGTTGGGAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: DLPYLGAGLLGNTRGLSEERPSW*WKLGNL Trigger: GAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTC...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | GACCTTGGAGAGGCCATCCTGGTGCTGGAAGTTGGGAAATCTCCACCAGCCACACCCTCTTTGTCCCCTTaGAGTTTCTGGGAGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: DLGEAILVLEVGKSPPATPSLSP*SFWELP Trigger: AGGAAGCTCCCAGAAACTCCAAGGGGACAAAGAGGG...TGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCAGACTCCTGGTGCTGGAAGTTaGGAAATCTCCACCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SRGLGFSQDRDLDGKSQTPGAGS*EISTSH Trigger: GTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGG...AGTCTGACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | AGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCAGAAGGCCATCCTGGTGCTaGAAGTTGGGAAATCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SLGLTVAFNPQGAAQASRRPSWC*KLGNLH Trigger: GTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCT...TCTGCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCGAGAGGCCATCCTGGTaGTGGAAGTTGGGAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: PFPVALAFHKTGTSMGRVERPSW*WKLGNL Trigger: GAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTC...GACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCCCTCTTTGTCCCCTTaGAGTTTCTGGGAGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSPSLSP*SFWELP Trigger: AGGAAGCTCCCAGAAACTCCAAGGGGACAAAGAGGG...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR GCA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGGAATCCGCAGGTTTGTaGTTTAGAATGTTGGCGAGC | + |
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Preference number: 2 (lower is better) Translates to: DLPYLGAGLLGNTRGLSEESAGL*FRMLAS Trigger: GCTCGCCAACATTCTAAAGCACAAACCTGCGGATTC...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCGCAGTCTTCACCCAGTaGTATGGACAAATTGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SSLGLTVAFNPQGAAQASAVFTQ*YGQIVS Trigger: GGAAACAATTTGTCCATACCACTGGGTGAAGACTGC...GCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CCA 90 bp | CCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTGCAAATGGAATGTACTTTTGTaGGGATGTTCCTCCAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PRETLLPCGHAASLCPCKWNVLL*GCSSRK Trigger: TTTCCTGGAGGAACATCCCCACAAAAGTACATTCCA...TTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR GCA 90 bp | TCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCAGACTGAATCCGCAGGTTTGTaGTTTAGAATGTTGGCGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SRGLGFSQDRDLDGKSQTESAGL*FRMLAS Trigger: GCTCGCCAACATTCTAAAGCACAAACCTGCGGATTC...AGTCTGACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CCA 90 bp | GACCTTGGAGAGGCCATCCTGGTGCTGGAAGTTGGGAAATCTCCACCAGCCACAGCAGTCTTCACCCAGTaGTATGGACAAATTGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DLGEAILVLEVGKSPPATAVFTQ*YGQIVS Trigger: GGAAACAATTTGTCCATACCACTGGGTGAAGACTGC...TGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTAGGAAACATGCTTCTTaGGACACTGTTCCTTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSRKHAS*DTVPSG Trigger: CCCAGAAGGAACAGTGTCCCAAGAAGCATGTTTCCT...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CCA 90 bp | CACCTGTGTATAGGGGTGTTGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATTTGGAGAGGCCATCCTaGTGCTGGAAGTTGGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: HLCIGVLSPCPSSKDLPYLERPS*CWKLGN Trigger: ATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAA...ATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACAACACCCCTATACACAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCTTCACCCAGTGGTATaGACAAATTGTTTCCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSLHPVV*TNCFLS Trigger: ACTGAGGAAACAATTTGTCCATACCACTGGGTGAAG...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CAA 90 bp | CACATTCCCACTGGCCAGCAGTCTTCACCCAGTGGTATGGACAAATaGTTTCCTCAGTTTCTCCAAAAACCTCAATCCTGCCCCACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HIPTGQQSSPSGMDK*FPQFLQKPQSCPTL Trigger: AAGAGTGGGGCAGGATTGAGGTTTTTGGAGAAACTGAGGAAACAATTTGTCCATACCACTGGGTGAAGACTGCTGGCCAGTGGGAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGTTTCTCCAAAAACCTCAATCCTGCCCCACTCTTACAGGAGGTCTTAGTCTTCTCCTGTCAGGATTaGGGCTTCTCTGGGTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSFSKNLNPAPLLQEVLVFSCQD*GFSGLR Trigger: TCTCAACCCAGAGAAGCCTCAATCCTGACAGGAGAA...GACTAAGACCTCCTGTAAGAGTGGGGCAGGATTGAGGTTTTTGGAGAAACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR TCA 90 bp | TGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAGAGGCTTCTCTGGGTTaGGAAGCAATGACCACCGGG | + |
|
Preference number: 2 (lower is better) Translates to: CDGGCVLEVNCSLFANILEASLG*EAMTTG Trigger: CCCGGTGGTCATTGCTTCTCAACCCAGAGAAGCCTC...TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| 3UTR-3UTR TCA 90 bp | GATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAGAAGAGGCTTCTCTGGGTTaGGAAGCAATGACCACCGGG | + |
|
Preference number: 2 (lower is better) Translates to: DGGCVLEVNCSLFANILEEASLG*EAMTTG Trigger: CCCGGTGGTCATTGCTTCTCAACCCAGAGAAGCCTC...TTCTAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTCTCCTGTCAGGATTaGGGCTTCTCTGGGTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VCDGGCVLEVNCSLFANIFSCQD*GFSGLR Trigger: TCTCAACCCAGAGAAGCCTCAATCCTGACAGGAGAA...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | CCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCTGGCTGCCACTTCCTaGGCCAAGCCAGAGGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: PPFQAAPKGDASAMRTCGLAATS*AKPEEP Trigger: TGGTTCCTCTGGCTTGGCCAAGGAAGTGGCAGCCAG...GCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR TCA 72 bp | GAGGCCTGGGGAGGCAGGAACAGCTCTCTCTCCTCCTaGGGGTCTGCTGACCTGTTGCCTGGTCACAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EAWGGRNSSLSS*GSADLLPGHRS Trigger: GGACCTGTGACCAGGCAACAGGTCAGCAGACCCTCAGGAGGAGAGAGAGCTGTTCCTGCCTCCCCAGGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR GCA 72 bp | CCCTCCAGGTTGGGCGTGCAGCCAGAGGCTAAGGGATaGAGCAGGTTAGAGTGGTGGCCTTTTCCCGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSRLGVQPEAKG*SRLEWWPFPVA Trigger: GGCCACGGGAAAAGGCCACCACTCTAACCTGCTGCATCCCTTAGCCTCTGGCTGCACGCCCAACCTGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR GCA 72 bp | CTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTaGAAAGGGGACAGACCCCTCCAGGTTGGGCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLPCGHAASLCP*KGDRPLQVGRA Trigger: TGCACGCCCAACCTGGAGGGGTCTGTCCCCTTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR GCA 72 bp | GCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATaGGGCCAGTCTGTGTCCCTGCAAAGGGGACAGACC | + |
|
Preference number: 3 (lower is better) Translates to: AAPKGDASAMRT*GQSVSLQRGQT Trigger: GGTCTGTCCCCTTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR GCA 72 bp | ACCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTaGCATGCGGACATGCGGCCAGTCTGTGTCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TTLPGCTQGRRF*HADMRPVCVPA Trigger: TGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTGCAAAACAGACCCCTCCAGGTaGGGCGTGCAGCCAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRETLLPCGHAASLCPCKTDPSR*GVQPEA Trigger: AGCCTCTGGCTGCACGCCCAACCTGGAGGGGTCTGT...TTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCGACCCAGGCCTTCCCTaGTGGGCTTGGCCTGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLGLTVAFNPQGAAQASDPGLP*WAWPEL Trigger: CAGCTCAGGCCAAGCCCACAAGGGAAGGCCTGGGTC...GCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR GCA 72 bp | ACAGCTCTCTCTCCTCCTGAGGGTCTGCTGACCTGTTaGCTGGTCACAGGTCCCCAGCCCTCAGGGCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TALSPPEGLLTC*LVTGPQPSGLA Trigger: AGCTAGCCCTGAGGGCTGGGGACCTGTGACCAGGCAACAGGTCAGCAGACCCTCAGGAGGAGAGAGAGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | CCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTaGACTTTCAGAGGCAGGCCTGAGCAGAGACCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLSWGWPSGEHT*TFRGRPEQRPG Trigger: GCCCGGTCTCTGCTCAGGCCTGCCTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | TCTGTGTCCCTGCAAAGGGGACAGACCCCTCCAGGTTaGGCGTGCAGCCAGAGGCTAAGGGATGCAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVSLQRGQTPPG*ACSQRLRDAAG Trigger: ACCTGCTGCATCCCTTAGCCTCTGGCTGCACGCCCAACCTGGAGGGGTCTGTCCCCTTTGCAGGGACACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | CCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCTGTGTATAGGGGTGTaGTCACCCTGTCCTTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PPFQAAPKGDASAMRTCGLCIGV*SPCPSS Trigger: AGAGGAAGGACAGGGTGACAACACCCCTATACACAG...GCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | GCCCCCTACCAGACCTCCCATTTCAGCCCAGTTCCCTaGTTGTCAGTCTATGAGCCAGGTGATCTCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: APYQTSHFSPVP*LSVYEPGDLPR Trigger: CCTGGGGAGATCACCTGGCTCATAGACTGACAACCAGGGAACTGGGCTGAAATGGGAGGTCTGGTAGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | TCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCAGACTGGGTCTGCTGACCTGTaGCCTGGTCACAGGTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRGLGFSQDRDLDGKSQTGSADL*PGHRSP Trigger: TGGGGACCTGTGACCAGGCAACAGGTCAGCAGACCC...AGTCTGACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCTGGCTGCCACTTCCTaGGCCAAGCCAGAGGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSLAATS*AKPEEP Trigger: TGGTTCCTCTGGCTTGGCCAAGGAAGTGGCAGCCAG...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | CCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGGCAGGCAGACCTCTCCCCTCTTaGTCCCCTTGGAGTTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PYLGAGLLGNTRGLSEAGRPLPS*SPWSFW Trigger: CCAGAAACTCCAAGGGGACAAAGAGGGGAGAGGTCT...GCCTGCCTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTAGGACCTCCCTTATCTaGGGGCTGGCCTTCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSRTSLI*GLAFWG Trigger: TCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTCCT...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR TCA 72 bp | GAGGCTTCTCCTGTCAGGATTGAGGCTTCTCTGGGTTaGGAAGCAATGACCACCGGGGTCCCCTCCCACATG | + |
|
Preference number: 3 (lower is better) Translates to: EASPVRIEASLG*EAMTTGVPSHM Trigger: CATGTGGGAGGGGACCCCGGTGGTCATTGCTTCTCAACCCAGAGAAGCCTCAATCCTGACAGGAGAAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| 3UTR GCA 72 bp | AGGGCGCAGCCCAAGCAAGCAGAATCCGCAGGTTTGTaGTTTAGAATGTTGGCGAGCTGGGCTGGGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RAQPKQAESAGL*FRMLASWAGKG Trigger: CCCTTTCCCAGCCCAGCTCGCCAACATTCTAAAGCACAAACCTGCGGATTCTGCTTGCTTGGGCTGCGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | AGAGGACCTTGGAGAGGCCATCCTGGTGCTGGAAGTTaGGAAATCTCCACCAGCCACATTCCCACTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGPWRGHPGAGS*EISTSHIPTGQ Trigger: CTGGCCAGTGGGAATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCCTTCTGGCTGCCACTTCCTTGGCCAAGCCAGAGGAACCATGTGTGTGTGCTTCTCCTGTCAGGATaGAGGCTTCTCTGGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GAFWLPLPWPSQRNHVCVLLLSG*RLLWVE Trigger: CTCAACCCAGAGAAGCCTCAATCCTGACAGGAGAAG...CACACACACATGGTTCCTCTGGCTTGGCCAAGGAAGTGGCAGCCAGAAGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | CGATCCACTGTGTTAAGGAACTGGGTGGCAAGTGGCCAGGGAAAAGGAGGGGGAGAATCAAAGAGGACCTaGGAGAGGCCATCCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RSTVLRNWVASGQGKGGGESKRT*ERPSWC Trigger: GCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTC...TCCCCCTCCTTTTCCCTGGCCACTTGCCACCCAGTTCCTTAACACAGTGGATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR TCA 72 bp | TTTAGAATGTTGGCGAGCTGGGCTGGGAAAGGGCTGTaGGACCCCCAAGGCTCCGAGGTACAGGATGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: FRMLASWAGKGL*DPQGSEVQDGC Trigger: ACATCCATCCTGTACCTCGGAGCCTTGGGGGTCTCACAGCCCTTTCCCAGCCCAGCTCGCCAACATTCTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCAGACTTCTCCTGTCAGGATaGAGGCTTCTCTGGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLGLTVAFNPQGAAQASRLLLSG*RLLWVE Trigger: CTCAACCCAGAGAAGCCTCAATCCTGACAGGAGAAG...TCTGCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | TCACCCTGTCCTTCCTCTAAGGACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGGCAGAATCCGCAGGTTaGTGCTTTAGAATGTTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SPCPSSKDLPYLGAGLLGAESAG*CFRMLA Trigger: CGCCAACATTCTAAAGCACAAACCTGCGGATTCTGC...CCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | CCCAGGGAATCAAAGAGGACCTTGGAGAGGCCATCCTaGTGCTGGAAGTTGGGAAATCTCCACCAGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: PRESKRTLERPS*CWKLGNLHQPH Trigger: ATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | AGCCAGGTGATCTCCCCAGGGAATCAAAGAGGACCTTaGAGAGGCCATCCTGGTGCTGGAAGTTGGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: SQVISPGNQRGP*RGHPGAGSWEI Trigger: GATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCTGGGGAGATCACCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGACGATCTCTGAGTTCCTaGTGGGTAACATCTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WWPFPVALAFHKTGTSMGRSLSS*WVTSSQ Trigger: CTGGCTAGATGTTACCCACAAGGAACTCAGAGATCG...TCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR TCA 72 bp | TTCAGAGGCAGGCCTGAGCAGAGACCGGGCTTCAGATaGTGGAATGTACTTTTGTGGGGATGTTCCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FRGRPEQRPGFR*WNVLLWGCSSR Trigger: CCTGGAGGAACATCCCCACAAAAGTACATTCCATCATCTGAAGCCCGGTCTCTGCTCAGGCCTGCCTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR GCA 72 bp | AGGGAATCAAAGAGGACCTTGGAGAGGCCATCCTGGTaGTGGAAGTTGGGAAATCTCCACCAGCCACATTCC | + |
|
Preference number: 3 (lower is better) Translates to: RESKRTLERPSW*WKLGNLHQPHS Trigger: GGAATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | GAATCAAAGAGGACCTTGGAGAGGCCATCCTGGTGCTaGAAGTTGGGAAATCTCCACCAGCCACATTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ESKRTLERPSWC*KLGNLHQPHSH Trigger: GTGGGAATGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGCAAGCAGAATCCGCAGGTTTGTGCTTTAGAATGTTGGCGAGCTGGGCTGCGATCTCTGAGTTCCTaGTGGGTAACATCTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSKQNPQVCALECWRAGLRSLSS*WVTSSQ Trigger: CTGGCTAGATGTTACCCACAAGGAACTCAGAGATCG...CAGCCCAGCTCGCCAACATTCTAAAGCACAAACCTGCGGATTCTGCTTGCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR GCA 72 bp | GAATGTACTTTTGTGGGGATGTTCCTCCAGGAAACATaGTTCTTGGGACACTGTTCCTTCTGGGCGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ECTFVGMFLQET*FLGHCSFWARP Trigger: AGGCCTCGCCCAGAAGGAACAGTGTCCCAAGAAGCATGTTTCCTGGAGGAACATCCCCACAAAAGTACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGAGTGGTATGGACAAATaGTTTCCTCAGTTTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DLPYLGAGLLGNTRGLSESGMDK*FPQFLQ Trigger: TTGGAGAAACTGAGGAAACAATTTGTCCATACCACT...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCAGTGGTATGGACAAATaGTTTCCTCAGTTTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PFPVALAFHKTGTSMGRVSGMDK*FPQFLQ Trigger: TTGGAGAAACTGAGGAAACAATTTGTCCATACCACT...GACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | CAGCCACATTCCCACTGGCCAGCAGTCTTCACCCAGTaGTATGGACAAATTGTTTCCTCAGTTTCTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QPHSHWPAVFTQ*YGQIVSSVSPK Trigger: TTTTGGAGAAACTGAGGAAACAATTTGTCCATACCACTGGGTGAAGACTGCTGGCCAGTGGGAATGTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CCA 72 bp | ACATTCCCACTGGCCAGCAGTCTTCACCCAGTGGTATaGACAAATTGTTTCCTCAGTTTCTCCAAAAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: TFPLASSLHPVV*TNCFLSFSKNL Trigger: GAGGTTTTTGGAGAAACTGAGGAAACAATTTGTCCATACCACTGGGTGAAGACTGCTGGCCAGTGGGAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR-3UTR CAA 90 bp | GATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAGAACTTCTCCTGTCAGGATaGAGGCTTCTCTGGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DGGCVLEVNCSLFANILELLLSG*RLLWVE Trigger: CTCAACCCAGAGAAGCCTCAATCCTGACAGGAGAAG...TTCTAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGTCAGGGCCTGGCGGGTaGACCGTGGCCTTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DLPYLGAGLLGNTRGLSESGPGG*TVAFAT Trigger: AGTGGCAAAGGCCACGGTTCACCCGCCAGGCCCTGA...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCGCTGATGGCGCACCGTaGATAACTCCAGTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPFQAAPKGDASAMRTCGADGAP*ITPVHC Trigger: ACAGTGAACTGGAGTTATCCACGGTGCGCCATCAGC...GCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCCTGGTCCAAGCCCTCTaGCTGATGGCGCACCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLGLTVAFNPQGAAQASLVQAL*LMAHRG Trigger: TCCACGGTGCGCCATCAGCCAGAGGGCTTGGACCAG...GCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | GGTGCCTTCTGGCTGCCACTTCCTTGGCCAAGCCAGAGGAACCATGTGTGTGTGCTGGTCCAAGCCCTCTaGCTGATGGCGCACCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAFWLPLPWPSQRNHVCVLVQAL*LMAHRG Trigger: TCCACGGTGCGCCATCAGCCAGAGGGCTTGGACCAG...CACACACACATGGTTCCTCTGGCTTGGCCAAGGAAGTGGCAGCCAGAAGGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGCATCCTCCCGCAGGATaGGGTAGGTGTGGCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLPYLGAGLLGNTRGLSEHPPAG*GRCGGP Trigger: TGGGCCGCCACACCTACCCCATCCTGCGGGAGGATG...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCATCCAAGCCCTCTGGCTaGTGGCGCACCGTGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLGLTVAFNPQGAAQASKPSG*WRTVDN Trigger: GTTATCCACGGTGCGCCATCAGCCAGAGGGCTTGGA...TGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCTGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGCGCAGCCCAAGCAAGCAGAATCCGCAGGTTTGTGCTTTAGAATGTTGCATCCTCCCGCAGGATaGGGTAGGTGTGGCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRAQPKQAESAGLCFRMLHPPAG*GRCGGP Trigger: TGGGCCGCCACACCTACCCCATCCTGCGGGAGGATG...CAACATTCTAAAGCACAAACCTGCGGATTCTGCTTGCTTGGGCTGCGCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | GACCTTGGAGAGGCCATCCTGGTGCTGGAAGTTGGGAAATCTCCACCAGCCACATCCAAGCCCTCTGGCTaGTGGCGCACCGTGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLGEAILVLEVGKSPPATSKPSG*WRTVDN Trigger: GTTATCCACGGTGCGCCATCAGCCAGAGGGCTTGGA...TGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGGGAGGCAGGAACAGCTCTCTCTCCTCCTGAGGGTCTGCTGACCTGTAGTGTGCATAGGTGGTaGCATCTCCCTGAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPGEAGTALSPPEGLLTCSVHRW*HLPEGR Trigger: TCTTCCCTCAGGGAGATGCCACCACCTATGCACACT...ACAGGTCAGCAGACCCTCAGGAGGAGAGAGAGCTGTTCCTGCCTCCCCAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCAGTCTGTGTCCCTGCAAAGGAAGTGTGCATAGGTaGTGGCATCTCCCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRETLLPCGHAASLCPCKGSVHR*WHLPEG Trigger: TCCCTCAGGGAGATGCCACCACCTATGCACACTTCC...TTTGCAGGGACACAGACTGGCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGGCAGGCCCTTCACGGCTTCCTTaGTCCTCTGCATCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYLGAGLLGNTRGLSEAGPSRLP*SSASLL Trigger: CAGCAGAGATGCAGAGGACCAAGGAAGCCGTGAAGG...GCCTGCCTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS-3UTR CCA 90 bp | TCACCCTGTCCTTCCTCTAAGGACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGCACTTGAGCTTCTCATaGACCGTCCCTCGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPCPSSKDLPYLGAGLLGHLSFS*TVPRSR Trigger: CCTGCTTCGAGGGACGGTCCATGAGAAGCTCAAGTG...CCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CCACCCTTCCAGGCTGCACCCAAGGGAGACGCTTCTGCCATGCGGACATGCGGCCCAGAAATTCATCAATaGTCACCACTCCATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPFQAAPKGDASAMRTCGPEIHQ*SPLHPG Trigger: ACCAGGATGGAGTGGTGACCATTGATGAATTTCTGG...GCCGCATGTCCGCATGGCAGAAGCGTCTCCCTTGGGTGCAGCCTGGAAGGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR GCA 90 bp | GACCTTGGAGAGGCCATCCTGGTGCTGGAAGTTGGGAAATCTCCACCAGCCACATCTTGCTCAGTGGTATaGGCCCAGGATCTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLGEAILVLEVGKSPPATSCSVV*AQDLPG Trigger: TCCTGGGAGATCCTGGGCGCATACCACTGAGCAAGA...TGTGGCTGGTGGAGATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGGCAGGCGCTGATGGCGCACCGTaGATAACTCCAGTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PYLGAGLLGNTRGLSEAGADGAP*ITPVHC Trigger: ACAGTGAACTGGAGTTATCCACGGTGCGCCATCAGC...GCCTGCCTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | TGGTGGCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGACACTTGAGCTTCTCATaGACCGTCCCTCGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WWPFPVALAFHKTGTSMGHLSFS*TVPRSR Trigger: CCTGCTTCGAGGGACGGTCCATGAGAAGCTCAAGTG...TCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | CTCAGTTTCTCCAAAAACCTCAATCCTGCCCCACTCTTACAGGAGGTCTTAGTCTCAGGGCCTGGCGGGTaGACCGTGGCCTTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSFSKNLNPAPLLQEVLVSGPGG*TVAFAT Trigger: AGTGGCAAAGGCCACGGTTCACCCGCCAGGCCCTGA...GACTAAGACCTCCTGTAAGAGTGGGGCAGGATTGAGGTTTTTGGAGAAACTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | CGATCCACTGTGTTAAGGAACTGGGTGGCAAGTGGCCAGGGAAAAGGAGGGGGACGTAGATGGACTTCATaGTGGCCAGCATCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSTVLRNWVASGQGKGGGRRWTS*WPASPP Trigger: AGGAGGAGATGCTGGCCATCATGAAGTCCATCTACG...TCCCCCTCCTTTTCCCTGGCCACTTGCCACCCAGTTCCTTAACACAGTGGATCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR GCA 90 bp | AGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCAGAGCTTCCTTGGTCCTCTaGATCTCTGCTGCTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGLTVAFNPQGAAQASRASLVL*ISAAER Trigger: CCTTTCAGCAGCAGAGATGCAGAGGACCAAGGAAGC...TCTGCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS-3UTR GCA 90 bp | GTGTTGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATCTTGGGGCTGGCCTTTCTTGCTCAGTGGTATaGGCCCAGGATCTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLSPCPSSKDLPYLGAGLSCSVV*AQDLPG Trigger: TCCTGGGAGATCCTGGGCGCATACCACTGAGCAAGA...AAGGCCAGCCCCAAGATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGCGCAGCCCAAGCAAGCAGAATCCGCAGGTTTGTGCTTTAGAATGTTGGGAAGTGTGCATAGGTaGTGGCATCTCCCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRAQPKQAESAGLCFRMLGSVHR*WHLPEG Trigger: TCCCTCAGGGAGATGCCACCACCTATGCACACTTCC...CAACATTCTAAAGCACAAACCTGCGGATTCTGCTTGCTTGGGCTGCGCCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCAGAAGTCCTCAAAGTGGATaGCCCCGTTCCCATCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGLTVAFNPQGAAQASRSPQSG*PRSHQH Trigger: ATGCTGATGGGAACGGGGCCATCCACTTTGAGGACT...TCTGCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGGGTTAACAGTGGCCTTCAATCCCCAGGGCGCAGCCCAAGCAAGCAGATCCCTCGAAGCAGGATaGAGAGCCCAACCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGLTVAFNPQGAAQASRSLEAG*RAQPQS Trigger: ACTTTGTGGTTGGGCTCTCCATCCTGCTTCGAGGGA...TCTGCTTGCTTGGGCTGCGCCCTGGGGATTGAAGGCCACTGTTAACCCTAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CAA 72 bp | GAGCCAGGTGATCTCCCCAGGGAATCAAAGAGGACCTaGGAGAGGCCATCCTGGTGCTGGAAGTTGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EPGDLPRESKRT*ERPSWCWKLGN Trigger: ATTTCCCAACTTCCAGCACCAGGATGGCCTCTCCAAGGTCCTCTTTGATTCCCTGGGGAGATCACCTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CAA 72 bp | TGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATCTaGGGGCTGGCCTTCTGGGGAACACACGTGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CHPVLPLRTSLI*GLAFWGTHVDF Trigger: AAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| 3UTR CAA 72 bp | TGCAGCAGGTTAGAGTGGTGGCCTTTTCCCGTGGCCTaGGCTTTTCACAAGACAGGGACCTCGATGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSRLEWWPFPVA*AFHKTGTSMGR Trigger: TCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGCCACCACTCTAACCTGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | GACCTCCCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGACAAAGTCCTCAAAGTaGATGGCCCCGTTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DLPYLGAGLLGNTRGLSETKSSK*MAPFPS Trigger: TGATGGGAACGGGGCCATCCACTTTGAGGACTTTGT...CTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGGGAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | GTGTTGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATCTTGGGGCTGGCCTTGCAGCTCCTTCTTGGTaGACTTGGTCTGAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLSPCPSSKDLPYLGAGLAAPSW*TWSELV Trigger: TACAAGCTCAGACCAAGTTCACCAAGAAGGAGCTGC...AAGGCCAGCCCCAAGATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CCAAGCAAGCAGAATCCGCAGGTTTGTGCTTTAGAATGTTGGCGAGCTGGGCTGTCCCTCGAAGCAGGATaGAGAGCCCAACCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSKQNPQVCALECWRAGLSLEAG*RAQPQS Trigger: ACTTTGTGGTTGGGCTCTCCATCCTGCTTCGAGGGA...CAGCCCAGCTCGCCAACATTCTAAAGCACAAACCTGCGGATTCTGCTTGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | CACCTGTGTATAGGGGTGTTGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATCTGCATCTCTGCTGCTaGAAGGGACCGTCACTAATC | + |
|
Preference number: 4 (lower is better) Translates to: HLCIGVLSPCPSSKDLPYLHLCC*KGPSLI Trigger: GATTAGTGACGGTCCCTTTCAGCAGCAGAGATGCAG...ATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACAACACCCCTATACACAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS-3UTR TCA 90 bp | CACCTGTGTATAGGGGTGTTGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATGTGGCCTTTGCCACTTaGTGCTTTCCCTCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLCIGVLSPCPSSKDLPYVAFAT*CFPSCS Trigger: TGAGCAAGAGGGAAAGCATCAAGTGGCAAAGGCCAC...ATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACAACACCCCTATACACAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | CCAAGCAAGCAGAATCCGCAGGTTTGTGCTTTAGAATGTTGGCGAGCTGGGCTGCAGCATCGAAGGCATTaGAGAGGAAGTGTGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSKQNPQVCALECWRAGLQHRRH*RGSVHR Trigger: CCTATGCACACTTCCTCTTCAATGCCTTCGATGCTG...CAGCCCAGCTCGCCAACATTCTAAAGCACAAACCTGCGGATTCTGCTTGCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CACCTGTGTATAGGGGTGTTGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATAGTGTGCATAGGTGGTaGCATCTCCCTGAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLCIGVLSPCPSSKDLPYSVHRW*HLPEGR Trigger: TCTTCCCTCAGGGAGATGCCACCACCTATGCACACT...ATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACAACACCCCTATACACAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | ATAAGGCTGCAAGCCCAGCTTCCAAAACCATTTCTTCCTATAGACCTCTCCCCTGTGGCCTTTGCCACTTaGTGCTTTCCCTCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRLQAQLPKPFLPIDLSPVAFAT*CFPSCS Trigger: TGAGCAAGAGGGAAAGCATCAAGTGGCAAAGGCCAC...AGGGGAGAGGTCTATAGGAAGAAATGGTTTTGGAAGCTGGGCTTGCAGCCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | CACTTCCTTGGCCAAGCCAGAGGAACCATGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTGTCCATTTTCTaGAAGAACCTCTCCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLGQARGTMCVCVCVCVFLSIF*KNLSTC Trigger: GCATGTGGAGAGGTTCTTTCAGAAAATGGACAGGAA...CACACACACACACACACACACACACATGGTTCCTCTGGCTTGGCCAAGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATACTGGTCCAAGCCCTCTaGCTGATGGCGCACCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANILVQAL*LMAHRG Trigger: TCCACGGTGCGCCATCAGCCAGAGGGCTTGGACCAG...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATCCAAGCCCTCTGGCTaGTGGCGCACCGTGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANISKPSG*WRTVDN Trigger: GTTATCCACGGTGCGCCATCAGCCAGAGGGCTTGGA...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | CTCAGTTTCTCCAAAAACCTCAATCCTGCCCCACTCTTACAGGAGGTCTTAGTCGCAGCTCCTTCTTGGTaGACTTGGTCTGAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSFSKNLNPAPLLQEVLVAAPSW*TWSELV Trigger: TACAAGCTCAGACCAAGTTCACCAAGAAGGAGCTGC...GACTAAGACCTCCTGTAAGAGTGGGGCAGGATTGAGGTTTTTGGAGAAACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | CACCTGTGTATAGGGGTGTTGTCACCCTGTCCTTCCTCTAAGGACCTCCCTTATTTCCTGTCCATTTTCTaGAAGAACCTCTCCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: HLCIGVLSPCPSSKDLPYFLSIF*KNLSTC Trigger: GCATGTGGAGAGGTTCTTTCAGAAAATGGACAGGAA...ATAAGGGAGGTCCTTAGAGGAAGGACAGGGTGACAACACCCCTATACACAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTTCTCCAAAAACCTCAATCCTGCCCCACTCTTACAGGAGGTCTTAGTCACAAAGTCCTCAAAGTaGATGGCCCCGTTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFSKNLNPAPLLQEVLVTKSSK*MAPFPS Trigger: TGATGGGAACGGGGCCATCCACTTTGAGGACTTTGT...GACTAAGACCTCCTGTAAGAGTGGGGCAGGATTGAGGTTTTTGGAGAAACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | TGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTACATCCTCCCGCAGGATaGGGTAGGTGTGGCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CDGGCVLEVNCSLFANILHPPAG*GRCGGP Trigger: TGGGCCGCCACACCTACCCCATCCTGCGGGAGGATG...TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAGAAGCAAGCCAGACTGCTTaGTCCGGCTGGCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DGGCVLEVNCSLFANILEASQTA*SGWQLP Trigger: AGGCAGCTGCCAGCCGGACCAAGCAGTCTGGCTTGC...TTCTAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATAGGAAGTGTGCATAGGTaGTGGCATCTCCCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANIGSVHR*WHLPEG Trigger: TCCCTCAGGGAGATGCCACCACCTATGCACACTTCC...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATACGTAGATGGACTTCATaGTGGCCAGCATCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANIRRWTS*WPASPP Trigger: AGGAGGAGATGCTGGCCATCATGAAGTCCATCTACG...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR GCA 90 bp | CTCAGTTTCTCCAAAAACCTCAATCCTGCCCCACTCTTACAGGAGGTCTTAGTCACGTTCTCAAACAGCTaGATGGAGTTCATGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSFSKNLNPAPLLQEVLVTFSNS*MEFMMF Trigger: GAACATCATGAACTCCATGCAGCTGTTTGAGAACGT...GACTAAGACCTCCTGTAAGAGTGGGGCAGGATTGAGGTTTTTGGAGAAACTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATAAGTCCTCAAAGTGGATaGCCCCGTTCCCATCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANISPQSG*PRSHQH Trigger: ATGCTGATGGGAACGGGGCCATCCACTTTGAGGACT...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATCCCTCGAAGCAGGATaGAGAGCCCAACCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANISLEAG*RAQPQS Trigger: ACTTTGTGGTTGGGCTCTCCATCCTGCTTCGAGGGA...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATACAGCATCGAAGGCATTaGAGAGGAAGTGTGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANIQHRRH*RGSVHR Trigger: CCTATGCACACTTCCTCTTCAATGCCTTCGATGCTG...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATCCAAGATGCCGAACTaGTTGAGGACGGCAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANISKMPN*LRTAMN Trigger: GTTCATTGCCGTCCTCAAGCAGTTCGGCATCTTGGA...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATAACAAAGTCCTCAAAGTaGATGGCCCCGTTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANITKSSK*MAPFPS Trigger: TGATGGGAACGGGGCCATCCACTTTGAGGACTTTGT...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | TGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTACACTTGAGCTTCTCATaGACCGTCCCTCGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDGGCVLEVNCSLFANILHLSFS*TVPRSR Trigger: CCTGCTTCGAGGGACGGTCCATGAGAAGCTCAAGTG...TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | TGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAGCTGATGGCGCACCGTaGATAACTCCAGTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDGGCVLEVNCSLFANILADGAP*ITPVHC Trigger: ACAGTGAACTGGAGTTATCCACGGTGCGCCATCAGC...TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | TGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAAGTGTGCATAGGTGGTaGCATCTCCCTGAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CDGGCVLEVNCSLFANILSVHRW*HLPEGR Trigger: TCTTCCCTCAGGGAGATGCCACCACCTATGCACACT...TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | TGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAGCAGCTCCTTCTTGGTaGACTTGGTCTGAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CDGGCVLEVNCSLFANILAAPSW*TWSELV Trigger: TACAAGCTCAGACCAAGTTCACCAAGAAGGAGCTGC...TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | GATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAGAACAGCATCGAAGGCATTaGAGAGGAAGTGTGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: DGGCVLEVNCSLFANILEQHRRH*RGSVHR Trigger: CCTATGCACACTTCCTCTTCAATGCCTTCGATGCTG...TTCTAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTCCTGTCCATTTTCTaGAAGAACCTCTCCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANIFLSIF*KNLSTC Trigger: GCATGTGGAGAGGTTCTTTCAGAAAATGGACAGGAA...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATACCAGAAATTCATCAATaGTCACCACTCCATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCDGGCVLEVNCSLFANIPEIHQ*SPLHPG Trigger: ACCAGGATGGAGTGGTGACCATTGATGAATTTCTGG...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR CCA 90 bp | TGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTACACTGCTGTCTTCCATaGACATGGGTTCCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CDGGCVLEVNCSLFANILHCCLP*TWVPRC Trigger: GCATCTTGGAACCCATGTCCATGGAAGACAGCAGTG...TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAGAATGTCTTCCATGGACATaGGTTCCAAGATGCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: DGGCVLEVNCSLFANILECLPWT*VPRCRT Trigger: AGTTCGGCATCTTGGAACCCATGTCCATGGAAGACA...TTCTAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
||
| 3UTR CAA 72 bp | TCTGTGTCTGTGTCTGTGTGTGATGGTGGCTGTGTCTaGGAAGTAAACTGCTCACTTTTTGCAAATATATTA | + |
|
Preference number: 4 (lower is better) Translates to: SVSVSVCDGGCV*EVNCSLFANIL Trigger: TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACACAGACACAGACACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR GCA 90 bp | TGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATATTAACGTTCTCAAACAGCTaGATGGAGTTCATGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CDGGCVLEVNCSLFANILTFSNS*MEFMMF Trigger: GAACATCATGAACTCCATGCAGCTGTTTGAGAACGT...TAATATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028850.15 ENSMUST00000088538.6 ENSMUST00000103215.11 |
||
| CDS-3UTR CAA 90 bp | CCTTATCTTGGGGCTGGCCTTCTGGGGAACACACGTGGACTTTCAGAGGCAGGCGCCTTCACGGCTTCCTaGGTCCTCTGCATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PYLGAGLLGNTRGLSEAGAFTAS*VLCISA Trigger: AGCAGAGATGCAGAGGACCAAGGAAGCCGTGAAGGC...GCCTGCCTCTGAAAGTCCACGTGTGTTCCCCAGAAGGCCAGCCCCAAGATAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS GCA 90 bp | CTGTCACTGCTGTCTTCCATGGACATGGGTTCCAAGATGCCGAACTaGTTGAGGACGGCAATGAACAGCAGCACCACCACAGCCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSSMDMGSKMPN*LRTAMNSSTTTAMA Trigger: CGCCATGGCTGTGGTGGTGCTGCTGTTCATTGCCGTCCTCAAGCAGTTCGGCATCTTGGAACCCATGTCCATGGAAGACAGCAGTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
||
| CDS CCA 90 bp | GCACTGGACAGGATCCACTTGATTAAGCAGCAACGCATCAGGGCCTaGCGGGTGAACCGTGGCCTTTGCCACTTGATGCTTTCCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALDRIHLIKQQRIRA*RVNRGLCHLMLSLL Trigger: CAAGAGGGAAAGCATCAAGTGGCAAAGGCCACGGTTCACCCGCCAGGCCCTGATGCGTTGCTGCTTAATCAAGTGGATCCTGTCCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS CCA 90 bp | CAGGATCTCCCAGGAGGTTGCCATCTGATGCCTTCACGGCTTCCTTaGTCCTCTGCATCTCTGCTGCTGAAAGGGACCGTCACTAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QDLPGGCHLMPSRLP*SSASLLLKGTVTNL Trigger: AAGATTAGTGACGGTCCCTTTCAGCAGCAGAGATGCAGAGGACCAAGGAAGCCGTGAAGGCATCAGATGGCAACCTCCTGGGAGATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS-3UTR CAA 90 bp | GCCTTTTCCCGTGGCCTTGGCTTTTCACAAGACAGGGACCTCGATGGGAAGAGTCTGGACAGGATCCACTaGATTAAGCAGCAACGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AFSRGLGFSQDRDLDGKSLDRIH*IKQQRI Trigger: GATGCGTTGCTGCTTAATCAAGTGGATCCTGTCCAG...ACTCTTCCCATCGAGGTCCCTGTCTTGTGAAAAGCCAAGGCCACGGGAAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTTCTCCAAAAACCTCAATCCTGCCCCACTCTTACAGGAGGTCTTAGTCCTGGACAGGATCCACTaGATTAAGCAGCAACGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LSFSKNLNPAPLLQEVLVLDRIH*IKQQRI Trigger: GATGCGTTGCTGCTTAATCAAGTGGATCCTGTCCAG...GACTAAGACCTCCTGTAAGAGTGGGGCAGGATTGAGGTTTTTGGAGAAACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGATGGTGGCTGTGTCTTGGAAGTAAACTGCTCACTTTTTGCAAATATAAAGATGCCGAACTGCTaGAGGACGGCAATGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VCDGGCVLEVNCSLFANIKMPNC*RTAMNS Trigger: GCTGTTCATTGCCGTCCTCAAGCAGTTCGGCATCTT...TATATTTGCAAAAAGTGAGCAGTTTACTTCCAAGACACAGCCACCATCACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
||
| CDS CAA 72 bp | GCTGAGCCTTGTGGGGCAGCACTGGACAGGATCCACTaGATTAAGCAGCAACGCATCAGGGCCTGGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AEPCGAALDRIH*IKQQRIRAWRV Trigger: CACCCGCCAGGCCCTGATGCGTTGCTGCTTAATCAAGTGGATCCTGTCCAGTGCTGCCCCACAAGGCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS CAA 90 bp | GCCTGGCGGGTGAACCGTGGCCTTTGCCACTTGATGCTTTCCCTCTaGCTCAGTGGTATGCGCCCAGGATCTCCCAGGAGGTTGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: AWRVNRGLCHLMLSL*LSGMRPGSPRRLPS Trigger: AGATGGCAACCTCCTGGGAGATCCTGGGCGCATACCACTGAGCAAGAGGGAAAGCATCAAGTGGCAAAGGCCACGGTTCACCCGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS CAA 90 bp | ACTGTCACTGCTGAGCCTTGTGGGGCAGCACTGGACAGGATCCACTaGATTAAGCAGCAACGCATCAGGGCCTGGCGGGTGAACCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TVTAEPCGAALDRIH*IKQQRIRAWRVNRG Trigger: GCCACGGTTCACCCGCCAGGCCCTGATGCGTTGCTGCTTAATCAAGTGGATCCTGTCCAGTGCTGCCCCACAAGGCTCAGCAGTGACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS CAA 90 bp | TCACTGCTGTCTGAGCCTTGTGGGGCAGCACTGGACAGGATCCACTaGATTAAGCAGCAACGCATCAGGGCCTGGCGGGTGAACCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLLSEPCGAALDRIH*IKQQRIRAWRVNRG Trigger: GCCACGGTTCACCCGCCAGGCCCTGATGCGTTGCTGCTTAATCAAGTGGATCCTGTCCAGTGCTGCCCCACAAGGCTCAGACAGCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103215.11 |
||
| CDS CAA 72 bp | CTGCTGCTGAAAGGGACCGTCACTAATCTTCCCGCTTaGCAGCCCGAGCAAGCCAGACTGCTTGGTCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLKGTVTNLPA*QPEQARLLGPA Trigger: AGCCGGACCAAGCAGTCTGGCTTGCTCGGGCTGCAAAGCGGGAAGATTAGTGACGGTCCCTTTCAGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS CAA 72 bp | TCTGAGCCTTGTGGGGCAGCACTGGACAGGATCCACTaGATTAAGCAGCAACGCATCAGGGCCTGGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SEPCGAALDRIH*IKQQRIRAWRV Trigger: CACCCGCCAGGCCCTGATGCGTTGCTGCTTAATCAAGTGGATCCTGTCCAGTGCTGCCCCACAAGGCTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103215.11 |
||
| CDS TCA 72 bp | TGGTATGCGCCCAGGATCTCCCAGGAGGTTGCCATCTaGTGCCTTCACGGCTTCCTTGGTCCTCTGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: WYAPRISQEVAI*CLHGFLGPLHL Trigger: GAGATGCAGAGGACCAAGGAAGCCGTGAAGGCATCAGATGGCAACCTCCTGGGAGATCCTGGGCGCATACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS GCA 72 bp | GATGGCGCACCGTGGATAACTCCAGTTCACTGTCACTaGTGTCTGAGCCTTGTGGGGCAGCACTGGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DGAPWITPVHCH*CLSLVGQHWTG Trigger: TCCTGTCCAGTGCTGCCCCACAAGGCTCAGACAGCAGTGACAGTGAACTGGAGTTATCCACGGTGCGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103215.11 |
||
| CDS CCA 72 bp | CCAGGAGGTTGCCATCTGATGCCTTCACGGCTTCCTTaGTCCTCTGCATCTCTGCTGCTGAAAGGGACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGGCHLMPSRLP*SSASLLLKGTV Trigger: GACGGTCCCTTTCAGCAGCAGAGATGCAGAGGACCAAGGAAGCCGTGAAGGCATCAGATGGCAACCTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS CCA 72 bp | GTAGCTGGTCCAAGCCCTCTGGCTGATGGCGCACCGTaGATAACTCCAGTTCACTGTCACTGCTGTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VAGPSPLADGAP*ITPVHCHCCLS Trigger: GCTCAGACAGCAGTGACAGTGAACTGGAGTTATCCACGGTGCGCCATCAGCCAGAGGGCTTGGACCAGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103215.11 |
||
| CDS CAA 72 bp | CCCAGGAGGTTGCCATCTGATGCCTTCACGGCTTCCTaGGTCCTCTGCATCTCTGCTGCTGAAAGGGACCGT | + |
|
Preference number: 6 (lower is better) Translates to: PRRLPSDAFTAS*VLCISAAERDR Trigger: ACGGTCCCTTTCAGCAGCAGAGATGCAGAGGACCAAGGAAGCCGTGAAGGCATCAGATGGCAACCTCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS CAA 72 bp | GTGAACCGTGGCCTTTGCCACTTGATGCTTTCCCTCTaGCTCAGTGGTATGCGCCCAGGATCTCCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VNRGLCHLMLSL*LSGMRPGSPRR Trigger: CCTCCTGGGAGATCCTGGGCGCATACCACTGAGCAAGAGGGAAAGCATCAAGTGGCAAAGGCCACGGTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS CAA 90 bp | TCACTGCTGTCTTCCATGGACATGGGTTCCAAGATGCCGAACTGCTaGAGGACGGCAATGAACAGCAGCACCACCACAGCCATGGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLLSSMDMGSKMPNC*RTAMNSSTTTAMAH Trigger: GTGCGCCATGGCTGTGGTGGTGCTGCTGTTCATTGCCGTCCTCAAGCAGTTCGGCATCTTGGAACCCATGTCCATGGAAGACAGCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
||
| CDS CCA 72 bp | TGGCCTTTGCCACTTGATGCTTTCCCTCTTGCTCAGTaGTATGCGCCCAGGATCTCCCAGGAGGTTGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: WPLPLDAFPLAQ*YAPRISQEVAI Trigger: GATGGCAACCTCCTGGGAGATCCTGGGCGCATACCACTGAGCAAGAGGGAAAGCATCAAGTGGCAAAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
||
| CDS CCA 72 bp | GTAGCTGGTCCAAGCCCTCTGGCTGATGGCGCACCGTaGATAACTCCAGTTCACTGTCACTGCTGTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VAGPSPLADGAP*ITPVHCHCCLP Trigger: TGGAAGACAGCAGTGACAGTGAACTGGAGTTATCCACGGTGCGCCATCAGCCAGAGGGCTTGGACCAGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
||
| CDS TCA 72 bp | CTTCACGGCTTCCTTGGTCCTCTGCATCTCTGCTGCTaGAAGGGACCGTCACTAATCTTCCCGCTTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LHGFLGPLHLCC*KGPSLIFPLCS Trigger: GCTGCAAAGCGGGAAGATTAGTGACGGTCCCTTTCAGCAGCAGAGATGCAGAGGACCAAGGAAGCCGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028850.15 |
||
| CDS CCA 72 bp | AGGATCCACTTGATTAAGCAGCAACGCATCAGGGCCTaGCGGGTGAACCGTGGCCTTTGCCACTTGATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RIHLIKQQRIRA*RVNRGLCHLML Trigger: AAGCATCAAGTGGCAAAGGCCACGGTTCACCCGCCAGGCCCTGATGCGTTGCTGCTTAATCAAGTGGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028850.15 ENSMUST00000103215.11 |
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| CDS CAA 72 bp | TCTTCCATGGACATGGGTTCCAAGATGCCGAACTGCTaGAGGACGGCAATGAACAGCAGCACCACCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSMDMGSKMPNC*RTAMNSSTTTA Trigger: GGCTGTGGTGGTGCTGCTGTTCATTGCCGTCCTCAAGCAGTTCGGCATCTTGGAACCCATGTCCATGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
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| CDS GCA 72 bp | CTGTCTTCCATGGACATGGGTTCCAAGATGCCGAACTaGTTGAGGACGGCAATGAACAGCAGCACCACCACA | + |
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Preference number: 6 (lower is better) Translates to: LSSMDMGSKMPN*LRTAMNSSTTT Trigger: TGTGGTGGTGCTGCTGTTCATTGCCGTCCTCAAGCAGTTCGGCATCTTGGAACCCATGTCCATGGAAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
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| CDS GCA 72 bp | GATGGCGCACCGTGGATAACTCCAGTTCACTGTCACTaGTGTCTTCCATGGACATGGGTTCCAAGATGCCGA | + |
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Preference number: 6 (lower is better) Translates to: DGAPWITPVHCH*CLPWTWVPRCR Trigger: TCGGCATCTTGGAACCCATGTCCATGGAAGACAGCAGTGACAGTGAACTGGAGTTATCCACGGTGCGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088538.6 |
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