Pregenerated sensors for KCNH8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035580Ensembl transcript IDs: ENSMUST00000039366.11
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTaGTATGGATATTGTTCAGGAATGACAATCAGGCACTCAGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: KENRSAGAMHSRGQQ*YGYCSGMTIRHSGK Trigger: TTTTCCTGAGTGCCTGATTGTCATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR CCA 90 bp | AATCCCCAAACTCTTTGTCTGGGGTTTCTATCTGCTCAGACCCTCTaGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATG | + |
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Preference number: 1 (lower is better) Translates to: NPQTLCLGFLSAQTL*VLGWLPKSVNQTSM Trigger: CATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCTGAGCAGATAGAAACCCCAGACAAAGAGTTTGGGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR TCA 90 bp | GTCTGTCAATCAGACCAGTATGTTAATACCTATACAGAAAAGGTTTaGTGCTTCTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: VCQSDQYVNTYTEKV*CFYNLEIVCYSIEV Trigger: CACCTCTATACTGTAGCAAACAATTTCTAGATTGTAGAAGCATCAAACCTTTTCTGTATAGGTATTAACATACTGGTCTGATTGACAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR CAA 90 bp | ATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATaGTTCAGGAATGACAATCAGGCACTCAGGAAAAACCTTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: ISGSHALPRPTVLWI*FRNDNQALRKNLCC Trigger: GCAGCAAAGGTTTTTCCTGAGTGCCTGATTGTCATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTCCCAAACTCTTTGTCTaGGGTTTCTATCTGCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TKRKIDQREPCTPEANSAPKLFV*GFYLLR Trigger: TCTGAGCAGATAGAAACCCCAGACAAAGAGTTTGGG...AGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR-3UTR GCA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCAAACTAGAGCTGTCATaGAGCAGTGGGTTTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: RNCLLQYRGGSAFFWPLAKLELS*SSGFGI Trigger: GATGCCAAACCCACTGCTGCATGACAGCTCTAGTTT...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR GCA 72 bp | TGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTaGAGAATTCCTAACTTTGCTCAGGCTCCACACCTG | + |
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Preference number: 3 (lower is better) Translates to: WLCLFLAPCPLS*RIPNFAQAPHL Trigger: CAGGTGTGGAGCCTGAGCAAAGTTAGGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR GCA 72 bp | AGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTaGTATGGATATTGTTCAGGAATGACAATCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RSAGAMHSRGQQ*YGYCSGMTIRH Trigger: GTGCCTGATTGTCATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR CCA 72 bp | AAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTaGGTTTGGCATCGAAAACGGCCCTTGTGTGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: KPQRQTRAVMQQ*VWHRKRPLCAD Trigger: ATCAGCACACAAGGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR-3UTR CAA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATCAATCTAGAAATTGTTaGCTACAGTATAGAGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SGSHALPRPTVLWILFRNQSRNC*LQYRGG Trigger: GCCACCTCTATACTGTAGCAAACAATTTCTAGATTG...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATGAACTCACCGGTCCGTaGGTGATGCTGCCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SGSHALPRPTVLWILFRNELTGP*VMLPSS Trigger: AGAGGAGGGCAGCATCACTCACGGACCGGTGAGTTC...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | CAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAAACGGCCCCCACTGCAATGTCACTaGCCGTTGTGCTCCGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QRQTRAVMQQWVWHRKRPPLQCH*PLCSEW Trigger: CCACTCGGAGCACAACGGTCAGTGACATTGCAGTGG...GGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | CAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAAACGTTGCCAGCAAAATaGGCCAGTCCCAGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QYRGGSAFFWPLALFPAETLPAK*ASPSQL Trigger: AAGCTGGCTGGGACTGGCTCATTTTGCTGGCAACGT...TTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | ACAAAAAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTGATGCTGCCCTCCTCTaGCCTACTTGGGAGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: TKRKIDQREPCTPEANSADAALL*PTWENQ Trigger: CTGGTTCTCCCAAGTAGGTCAGAGGAGGGCAGCATC...AGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATCCGTTGTGCTCCGAGTaGTGGACAGGTCCTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNPLCSE*WTGPHC Trigger: GCAATGAGGACCTGTCCACCACTCGGAGCACAACGG...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | CAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAAACGGCCCAGTTGCTGGGGCAGGTaGTGCACACGGATGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QRQTRAVMQQWVWHRKRPSCWGR*CTRMKS Trigger: AGACTTCATCCGTGTGCACCACCTGCCCCAGCAACT...GGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | ATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTGCAAAGCATCCCCCTaGCGCAGCAGATACTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IEVALPFSGPLPSFLQNSCKASP*RSRYSP Trigger: AGGAGAGTATCTGCTGCGCCAGGGGGATGCTTTGCA...GGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | ATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCGGAAATCCTGGGCTCTaGCCTGATCTGTTCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: IEVALPFSGPLPSFLQNSGNPGL*PDLFRA Trigger: GGCTCTGAACAGATCAGGCCAGAGCCCAGGATTTCC...GGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTCGAGCATCCTCTGCTTaGGTTGCTGGGGCAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCRASSA*VAGAGG Trigger: ACCACCTGCCCCAGCAACTCAAGCAGAGGATGCTCG...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | CAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAAACGGCCCGGAGACTCTGATAGGTaGGTGGAATGGTACCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QRQTRAVMQQWVWHRKRPGDSDR*VEWYRS Trigger: GGAACGGTACCATTCCACTCACCTATCAGAGTCTCC...GGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | ACAAAAAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTTGTAGGCAAGGCTGGTaGGCACTCCAACTCACCCTA | + |
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Preference number: 4 (lower is better) Translates to: TKRKIDQREPCTPEANSACRQGW*ALQLTL Trigger: TAGGGTGAGTTGGAGTGCTCACCAGCCTTGCCTACA...AGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTTTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATTCCGATCTCGGATTCTaGAAGGGGAGGGGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: SGSHALPRPTVLWILFRNSDLGF*KGRGNP Trigger: AGGATTTCCCCTCCCCTTGCAGAATCCGAGATCGGA...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATTTGTGCTCCGAGTGGTaGACAGGTCCTCATTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SGSHALPRPTVLWILFRNLCSEW*TGPHCQ Trigger: TTGGCAATGAGGACCTGTCCACCACTCGGAGCACAA...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATTGCAGCTCTTCTGCATaGCTTCAGTTCGTGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: SGSHALPRPTVLWILFRNCSSSA*LQFVQT Trigger: GGTTTGCACGAACTGAAGTCATGCAGAAGAGCTGCA...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATCGGGCTGAGTCAAAGTaGCTCCCTGCTCTTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNRAESK*LPALDL Trigger: AAGATCAAGAGCAGGGAGCCACTTTGACTCAGCCCG...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | CAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAAACGGCCCAGAGAGTGGCAGAGATaGACTGCAAAGGTGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QRQTRAVMQQWVWHRKRPREWQR*TAKVSV Trigger: CACTGACACCTTTGCAGTCCATCTCTGCCACTCTCT...GGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGGCTCCGTCTCCGGGCTaGGTCAAAGTGGCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWAPSPG*VKVAPC Trigger: GCAGGGAGCCACTTTGACTCAGCCCGGAGACGGAGC...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | CAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATCTTTGAAGGTGTCCTaGGATGTGATAAAGGACGGC | + |
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Preference number: 4 (lower is better) Translates to: QYRGGSAFFWPLALFPAESLKVS*DVIKDG Trigger: GCCGTCCTTTATCACATCTCAGGACACCTTCAAAGA...TTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATATGGGAGTCTCTTGTTaGTGCTTCCATTCCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNMGVSC*CFHSPW Trigger: CCAAGGGGAATGGAAGCATCAACAAGAGACTCCCAT...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATAACTGGGATGGCTGCTaGGGTGACAAGATGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNNWDGC*GDKMFS Trigger: GGAAAACATCTTGTCACCTCAGCAGCCATCCCAGTT...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATCAGCTGCAGCTCTTCTaGATGACTTCAGTTCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNQLQLF*MTSVRA Trigger: TGCACGAACTGAAGTCATGCAGAAGAGCTGCAGCTG...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATCCCCCAGCGTGTTGTTaGCATAATATGGAGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGSHALPRPTVLWILFRNPPACC*HNMEIP Trigger: TGGAATCTCCATATTATGGCAACAACACGCTGGGGG...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCATCCTCTGCTTGAGTTaGTGGGGCAGGTGGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: RNCLLQYRGGSAFFWPLAILCLS*WGRWCT Trigger: TGTGCACCACCTGCCCCAGCAACTCAAGCAGAGGAT...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATATGCACCTCAGGAACTaGAAGTGGCCTTCTTGGATA | + |
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Preference number: 4 (lower is better) Translates to: SGSHALPRPTVLWILFRNMHLRN*KWPSWI Trigger: TATCCAAGAAGGCCACTTGCAGTTCCTGAGGTGCAT...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | CAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAAACGGCCCCTTGGGAGAACCAGGTaGAAGGATGTTTCTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: QRQTRAVMQQWVWHRKRPLGRTR*KDVSDE Trigger: CTCATCAGAAACATCCTTGCACCTGGTTCTCCCAAG...GGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | ATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCACTCTGATAGGTGAGTaGAATGGTACCGTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: IEVALPFSGPLPSFLQNSTLIGE*NGTVPE Trigger: CTCAGGAACGGTACCATTCCACTCACCTATCAGAGT...GGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | ATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCAACCTGGCAGTGGGATaGAGAATAATCCAGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: IEVALPFSGPLPSFLQNSNLAVG*RIIQVW Trigger: CCAAACCTGGATTATTCTCCATCCCACTGCCAGGTT...GGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | ACAAAAAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTAGGGACTTTTCTATCTaGAGCATCAGCTGCTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: TKRKIDQREPCTPEANSARDFSI*SISCSL Trigger: CAACGAGCAGCTGATGCTTCAGATAGAAAAGTCCCT...AGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AAAAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAGTGGCTCCCTGCTCTTaGTCTTCCTTTGGTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KSHKGKLELSCSSGFGIEVAPCS*SSFGSV Trigger: GACAGAACCAAAGGAAGATCAAGAGCAGGGAGCCAC...TTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATACTGACCAAGTTGTCTaGAAGTACTCGAGCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNTDQVV*KYSSIL Trigger: GAGGATGCTCGAGTACTTTCAGACAACTTGGTCAGT...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | CAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAAACGGCCCGTAAGTTTTCCAAACTaGAAGAACTCACCGGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: QRQTRAVMQQWVWHRKRPVSFPN*KNSPVR Trigger: ACGGACCGGTGAGTTCTTTCAGTTTGGAAAACTTAC...GGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | CAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAAGGAGAAGATCTTCTCTaGATCTGTGTTAGCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: QYRGGSAFFWPLALFPAEGEDLL*ICVSRH Trigger: GTGTCTGCTAACACAGATGCAGAGAAGATCTTCTCC...TTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | CAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAAACGGCCCATCTCCTTGTTCAGATaGATTGTGATGTCAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: QRQTRAVMQQWVWHRKRPISLFR*IVMSER Trigger: GCGCTCTGACATCACAATGCATCTGAACAAGGAGAT...GGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCAGCACACGAAGTAGATaGCCTGCAAAGCATCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: RNCLLQYRGGSAFFWPLASTRSR*PAKHPP Trigger: AGGGGGATGCTTTGCAGGCCATCTACTTCGTGTGCT...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AAAAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAACAGCACTACCCAGGCTaGAAAGCTGCACTTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KSHKGKLELSCSSGFGIEQHYPG*KAALSG Trigger: ACCTGAAAGTGCAGCTTTCCAGCCTGGGTAGTGCTG...TTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATAAGTTCACTGTCTGCTaGGTTTTGCTCGTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNKFTVC*VLLVSF Trigger: GAAGCTCACGAGCAAAACCCAGCAGACAGTGAACTT...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTAGTGTGGTATCTGAATaGGGGGAGATGCACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCSVVSE*GEMHLR Trigger: CCTGAGGTGCATCTCCCCCCATTCAGATACCACACT...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR TCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTAACTTCCATAGAGCCTaGGCACACGAAGTAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCNFHRA*AHEVDG Trigger: GCCATCTACTTCGTGTGCTCAGGCTCTATGGAAGTT...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AAAAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAACTCGAAGGTTGTATGTaGGGTCGTGCTGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHKGKLELSCSSGFGIELEGCM*GRAGCL Trigger: AAGACATCCAGCACGACCTCACATACAACCTTCGAG...TTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AAAAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAACTTGGGCTCTGCCTGTaGGACTGTAGATTTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSHKGKLELSCSSGFGIELGLCL*DCRFVR Trigger: TCGAACAAATCTACAGTCTCACAGGCAGAGCCCAAG...TTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATGAACAGTATCTCCACTaGAATGTCACTGACCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNEQYLH*NVTDRC Trigger: ACAACGGTCAGTGACATTGCAGTGGAGATACTGTTC...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCCCAGGCTGGAAAGCTaGACTTTCAGGTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNCLLQYRGGSAFFWPLAPRLES*TFRFFS Trigger: AGAGAAGAACCTGAAAGTGCAGCTTTCCAGCCTGGG...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATCTGAACAGTAGACTATaGGGAAACCCTTTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNLNSRL*GNPLPL Trigger: AAGTGGCAAAGGGTTTCCCCATAGTCTACTGTTCAG...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTAACTTTGCTCCAGCAGGCACCAAAATaGAGCCCCATTCTTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SAFFWPLALFPAEFLTLLQQAPK*SPILLV Trigger: TACAAGAAGAATGGGGCTCCATTTTGGTGCCTGCTG...GAGCAAAGTTAGGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTTTGTGTGCATACTCTaGGTAAAGGCCCAGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCFVCIL*VKAQHL Trigger: GAGGTGCTGGGCCTTTACCCAGAGTATGCACACAAA...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| 3UTR CAA 72 bp | AGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATaGTTCAGGAATGACAATCAGGCACTCAGGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHALPRPTVLWI*FRNDNQALRKN Trigger: GTTTTTCCTGAGTGCCTGATTGTCATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR TCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTGTTATGTCTTTGAATaGGGCCAGGAAAAGGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNCYVFE*GQEKDY Trigger: GTAGTCCTTTTCCTGGCCTCATTCAAAGACATAACA...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR TCA 90 bp | CAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATCTCCATTTTTCCAATaGCATACCAGATACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QYRGGSAFFWPLALFPAESPFFQ*HTRYMP Trigger: TGGCATGTATCTGGTATGTCATTGGAAAAATGGAGA...TTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATTATCCCATTGTTGACTaGCCAAGTTGTCTGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGSHALPRPTVLWILFRNYPIVD*PSCLKV Trigger: TACTTTCAGACAACTTGGTCAGTCAACAATGGGATA...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR GCA 90 bp | ACAAAAAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTTTGTATGTGAGGTCGTaGTGGATGTCTTCTACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TKRKIDQREPCTPEANSALYVRS*WMSSTN Trigger: ATTCGTAGAAGACATCCAGCACGACCTCACATACAA...AGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATAGCTTGTTAATCTGCTaGTTGGTTTCTTCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNSLLIC*LVSSAL Trigger: CAAGGCTGAAGAAACCAAGCAGCAGATTAACAAGCT...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATGTTGTTGCCATAATATaGAGATTCCAGTCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNVVAII*RFQSLP Trigger: GGGAAGAGACTGGAATCTCCATATTATGGCAACAAC...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTCCTTGGTTCTAGTGTaGTACAGGCTCCATCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCSLVLV*YRLHLE Trigger: CTCTAGATGGAGCCTGTACCACACTAGAACCAAGGA...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTGTGACAACTTCTACTaGAAAGTTCTCCAAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNCDNFY*KVLQAF Trigger: GAACGCTTGGAGAACTTTCCAGTAGAAGTTGTCACA...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTGGTCCTCATTGCCAATaGAACACACATTGTAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCGPHCQ*NTHCKG Trigger: TCCCTTACAATGTGTGTTTCATTGGCAATGAGGACC...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTCTTGGCCAGACTTGCTaGCATAAGTTGTTCGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCLGQTC*HKLFGN Trigger: ATTTCCGAACAACTTATGTCAGCAAGTCTGGCCAAG...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGAACCGACTTCCCACTTaGGAAGGCTGTTGTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWNRLPT*EGCCPP Trigger: GGGAGGACAACAGCCTTCTCAAGTGGGAAGTCGGTT...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | ACAAAAAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTAATCTATCCCATTGTTaGCTGACCAAGTTGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKRKIDQREPCTPEANSANLSHC*LTKLSE Trigger: TTCAGACAACTTGGTCAGTCAACAATGGGATAGATT...AGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTAACTTTGCTCTTGAAAGTGCTGAAATaGAGCAGGATGAACTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAFFWPLALFPAEFLTLLLKVLK*SRMNLD Trigger: GTCCAAGTTCATCCTGCTGCATTTCAGCACTTTCAA...GAGCAAAGTTAGGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGTACTCGAGCATCCTCTaGTTGAGTTGCTGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWYSSIL*LSCWGR Trigger: CCTGCCCCAGCAACTCAAGCAGAGGATGCTCGAGTA...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTAACTTTGCTCTTCTACGAATTTGTGTaGATACTCTGGGTAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAFFWPLALFPAEFLTLLFYEFV*ILWVKA Trigger: GGCCTTTACCCAGAGTATGCACACAAATTCGTAGAA...GAGCAAAGTTAGGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | ATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTCTGAGTTTCCTCATTaGTGTTACCATCTTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: IEVALPFSGPLPSFLQNSSEFPH*CYHLQF Trigger: GAATTGAAGATGGTAACAGCAATGAGGAAACTCAGA...GGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGTGTGCTCCACCTGCCTaGAAATGTAGGCAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWCAPPA*KCRQGW Trigger: CCAGCCTTGCCTACATTTGCAGGCAGGTGGAGCACA...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGTATGGGGAAACCCTTTaGCACTTGGGCATTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWYGETL*HLGIGQ Trigger: CTGGCCAATGCCCAAGTGGCAAAGGGTTTCCCCATA...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTGCTTCCAGTCTTTTTaGTATGTGAGACAGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCCFQSF*YVRQRI Trigger: GATCCTCTGTCTCACATAGCAAAAAGACTGGAAGCA...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | ATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCCTAGATAGGTCTTATTaGTTCCAGTCTTTTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IEVALPFSGPLPSFLQNSLDRSY*FQSFCY Trigger: ATAGCAAAAAGACTGGAAGCAATAAGACCTATCTAG...GGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCTTGAGCTTGTTAATCTaGTGCTTGGTTTCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RNCLLQYRGGSAFFWPLALSLLI*CLVSSA Trigger: GGCTGAAGAAACCAAGCAGCAGATTAACAAGCTCAA...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR GCA 90 bp | AAAAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAATACGTTTATGGCTTTaGTGTCCTTTACATCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSHKGKLELSCSSGFGIEIRLWL*CPLHPL Trigger: CAGCGGATGTAAAGGACAGCAAAGCCATAAACGTAT...TTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTAAGGAGGTTTTAATATaGAGAGACAGAGACCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCKEVLI*RDRDLR Trigger: CCTCAGGTCTCTGTCTCTCCATATTAAAACCTCCTT...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCTATGTGAGGTCGTGCTaGATGTCTTCTACGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNCLLQYRGGSAFFWPLAYVRSC*MSSTNL Trigger: CAAATTCGTAGAAGACATCCAGCACGACCTCACATA...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR TCA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCCAAAGTCAAAAGTCTaGGTTTCCTCATTGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RNCLLQYRGGSAFFWPLAPKSKV*VSSLLL Trigger: TAACAGCAATGAGGAAACTCAGACTTTTGACTTTGG...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTAACTTTGCTCAGAAACCTTATACTCTaGAAACGCTGGTTTATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SAFFWPLALFPAEFLTLLRNLIL*KRWFIY Trigger: GTAGATAAACCAGCGTTTCCAGAGTATAAGGTTTCT...GAGCAAAGTTAGGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CCA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATAGAATAATCCAGGTTTaGAGAATGATGAAGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SIEVALPFSGPLPSFLQNRIIQV*RMMKFT Trigger: AGTGAACTTCATCATTCTCCAAACCTGGATTATTCT...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR GCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCAAACAAAAACTTaGAGCTGCAGCTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWPQTKT*SCSSSA Trigger: TGCAGAAGAGCTGCAGCTGCAAGTTTTTGTTTGGGG...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR GCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGATGAAGTTCACTGTCTaGTGGGTTTTGCTCGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWMKFTV*WVLLVS Trigger: GCTCACGAGCAAAACCCAGCAGACAGTGAACTTCAT...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR TCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGAGAGACCTTTCAGGATaGTGCACTGTAGATCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWRDLSG*CTVDHS Trigger: ACTGTGATCTACAGTGCATCATCCTGAAAGGTCTCT...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAATGTTTTCCAGAAGTTaGATGATGCTTCTCATATCT | + |
|
Preference number: 4 (lower is better) Translates to: KSHKGKLELSCSSGFGIEMFSRS*MMLLIS Trigger: AGATATGAGAAGCATCATGCAACTTCTGGAAAACAT...TTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCAGCAGATACTCTCCTaGAGCACAAAAGGAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWQQILS*STKGGF Trigger: AAAACCTCCTTTTGTGCTCCAGGAGAGTATCTGCTG...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR TCA 90 bp | CCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTAATACCTATACAAGTCTTTTTGCTATGTaGGACAGAGGATCCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PWMVTKVCQSDQYVNTYTSLFAM*DRGSPC Trigger: ACAAGGGGATCCTCTGTCTCACATAGCAAAAAGACT...TGTATAGGTATTAACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR TCA 90 bp | CCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTAATACCTATACATGTCTGTTATGTCTTTaGATGAGGCCAGGAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PWMVTKVCQSDQYVNTYTCLLCL*MRPGKG Trigger: TCCTTTTCCTGGCCTCATTCAAAGACATAACAGACA...TGTATAGGTATTAACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR TCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGATTACATCACTCTCATaGCCTTCTCGAAGGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWITSLS*PSRRLY Trigger: ATACAACCTTCGAGAAGGTCATGAGAGTGATGTAAT...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | CCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTAATACCTATACAAAGGACACATTGGGGTaGGATGTAGAGAACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PWMVTKVCQSDQYVNTYTKDTLG*DVENKT Trigger: AGTTTTGTTCTCTACATCCCACCCCAATGTGTCCTT...TGTATAGGTATTAACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CCA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGATACTCTGGAAACGCTaGTTTATCTACAAACACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWILWKR*FIYKHV Trigger: AACGTGTTTGTAGATAAACCAGCGTTTCCAGAGTAT...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| 3UTR CAA 72 bp | AGAAAAGGTTTGATGCTTCTACAATCTAGAAATTGTTaGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGLMLLQSRNC*LQYRGGSAFFW Trigger: CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAGAAGCATCAAACCTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | ACAAAAAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTCATCCTCTGCTTGAGTaGCTGGGGCAGGTGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TKRKIDQREPCTPEANSAHPLLE*LGQVVH Trigger: GTGCACCACCTGCCCCAGCAACTCAAGCAGAGGATG...AGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTTTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCGAGCATCCTCTGCTaGAGTTGCTGGGGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SIEVALPFSGPLPSFLQNSSILC*SCWGRW Trigger: CCACCTGCCCCAGCAACTCAAGCAGAGGATGCTCGA...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 90 bp | TGGTCTCCACCCCAAACAAAAACTTGCAGCTGCAGCTCTTCTGCATaGCTTCAGTTCGTGCAAACCCGGCCAGCTCACAGAAGCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSPPQTKTCSCSSSA*LQFVQTRPAHRSHL Trigger: CAGATGGCTTCTGTGAGCTGGCCGGGTTTGCACGAACTGAAGTCATGCAGAAGAGCTGCAGCTGCAAGTTTTTGTTTGGGGTGGAGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 90 bp | CAAGAGCCTGGTAAGTTTTCCAAACTGAAAGAACTCACCGGTCCGTaGGTGATGCTGCCCTCCTCTGACCTACTTGGGAGAACCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QEPGKFSKLKELTGP*VMLPSSDLLGRTRC Trigger: GCACCTGGTTCTCCCAAGTAGGTCAGAGGAGGGCAGCATCACTCACGGACCGGTGAGTTCTTTCAGTTTGGAAAACTTACCAGGCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS GCA 90 bp | TCGTTGGTCTCCACCCCAAACAAAAACTTGCAGCTGCAGCTCTTCTaGATGACTTCAGTTCGTGCAAACCCGGCCAGCTCACAGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLVSTPNKNLQLQLF*MTSVRANPASSQKP Trigger: TGGCTTCTGTGAGCTGGCCGGGTTTGCACGAACTGAAGTCATGCAGAAGAGCTGCAGCTGCAAGTTTTTGTTTGGGGTGGAGACCAACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 90 bp | TTCTTCAGCCTTGATGAACAGAAACGCAGCTCCGATCTCGGATTCTaGAAGGGGAGGGGAAATCCTGGGCTCTGGCCTGATCTGTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFSLDEQKRSSDLGF*KGRGNPGLWPDLFR Trigger: TCTGAACAGATCAGGCCAGAGCCCAGGATTTCCCCTCCCCTTGCAGAATCCGAGATCGGAGCTGCGTTTCTGTTCATCAAGGCTGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CAA 90 bp | AGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTATGGATATTGTTCAGGAATCTCTGGAAGGACACATaGGGGTGGGATGTAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGSHALPRPTVLWILFRNLWKDT*GWDVEN Trigger: GTTCTCTACATCCCACCCCAATGTGTCCTTCCAGAG...ATTCCTGAACAATATCCATAGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS CCA 90 bp | AGAGTGGCAGAGATGGACTGCAAAGGTGTCAGTGTGGTATCTGAATaGGGGGAGATGCACCTCAGGAACTGCAAGTGGCCTTCTTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RVAEMDCKGVSVVSE*GEMHLRNCKWPSWI Trigger: TATCCAAGAAGGCCACTTGCAGTTCCTGAGGTGCATCTCCCCCCATTCAGATACCACACTGACACCTTTGCAGTCCATCTCTGCCACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | CAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTTGCCACTTGGGCATaGGCCAGGATGAAGTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QYRGGSAFFWPLALFPAEFATWA*ARMKLL Trigger: TAGCAACTTCATCCTGGCCAATGCCCAAGTGGCAAA...TTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | ATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCAGTGGCTCCCTGCTCTaGATCTTCCTTTGGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IEVALPFSGPLPSFLQNSSGSLL*IFLWFC Trigger: ACAGAACCAAAGGAAGATCAAGAGCAGGGAGCCACT...GGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAGTGAGCTTCAGTTCGTaGAGGGCTGCTGCCCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: KSHKGKLELSCSSGFGIEVSFSS*RAAAHQ Trigger: TTGGTGGGCAGCAGCCCTCAACGAACTGAAGCTCAC...TTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 90 bp | CTTGGACTAAGCTCTGGGGTTCCAGCACTACCCAGGCTGGAAAGCTaGACTTTCAGGTTCTTCTCTTTCTTTCTACCATGGTTAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLSSGVPALPRLES*TFRFFSFFLPWLGG Trigger: CCCACCTAACCATGGTAGAAAGAAAGAGAAGAACCTGAAAGTGCAGCTTTCCAGCCTGGGTAGTGCTGGAACCCCAGAGCTTAGTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 90 bp | TGCTTGGTTTTAGGGGAGTTGGCACTGGAGACTCTGATAGGTGAGTaGAATGGTACCGTTCCTGAGGCCAGTTGCTTTAAGCTCAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLVLGELALETLIGE*NGTVPEASCFKLKP Trigger: AGGCTTGAGCTTAAAGCAACTGGCCTCAGGAACGGTACCATTCCACTCACCTATCAGAGTCTCCAGTGCCAACTCCCCTAAAACCAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS CCA 90 bp | TGGAGAATAATCCAGGTTTGGAGAATGATGAAGTTCACTGTCTGCTaGGTTTTGCTCGTGAGCTTCAGTTCGTTGAGGGCTGCTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WRIIQVWRMMKFTVC*VLLVSFSSLRAAAH Trigger: GTGGGCAGCAGCCCTCAACGAACTGAAGCTCACGAGCAAAACCCAGCAGACAGTGAACTTCATCATTCTCCAAACCTGGATTATTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTCAGTCCCAGCCAGCTTaGAAAGTGCTGAAATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCQSQPA*KVLKCS Trigger: GCTGCATTTCAGCACTTTCAAAGCTGGCTGGGACTG...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | AGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATGACACCACTGTGACATaGAAAGCATACAGGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SIEVALPFSGPLPSFLQNDTTVT*KAYRRS Trigger: TGACCTCCTGTATGCTTTCAATGTCACAGTGGTGTC...ATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 90 bp | AGGTTCTTCTCTTTCTTTCTACCATGGTTAGGTGGGTCAGCTTCCTaGTTGGTTTTAGGGGAGTTGGCACTGGAGACTCTGATAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RFFSFFLPWLGGSAS*LVLGELALETLIGE Trigger: CTCACCTATCAGAGTCTCCAGTGCCAACTCCCCTAAAACCAAGCAGGAAGCTGACCCACCTAACCATGGTAGAAAGAAAGAGAAGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 90 bp | TGTGAGGTCGTGCTGGATGTCTTCTACGAATTTGTGTGCATACTCTaGGTAAAGGCCCAGCACCTCAAAGAGACCTTTCAGGATGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: CEVVLDVFYEFVCIL*VKAQHLKETFQDDA Trigger: TGCATCATCCTGAAAGGTCTCTTTGAGGTGCTGGGCCTTTACCCAGAGTATGCACACAAATTCGTAGAAGACATCCAGCACGACCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 90 bp | AAGCTGCACTTTCAGGTTCTTCTCTTTCTTTCTACCATGGTTAGGTaGGTCAGCTTCCTGCTTGGTTTTAGGGGAGTTGGCACTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLHFQVLLFLSTMVR*VSFLLGFRGVGTGD Trigger: GTCTCCAGTGCCAACTCCCCTAAAACCAAGCAGGAAGCTGACCCACCTAACCATGGTAGAAAGAAAGAGAAGAACCTGAAAGTGCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 90 bp | GCTGTTACCATCTTCAATTCCATCAACAATCCTTGGACTAAGCTCTaGGGTTCCAGCACTACCCAGGCTGGAAAGCTGCACTTTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVTIFNSINNPWTKL*GSSTTQAGKLHFQV Trigger: AACCTGAAAGTGCAGCTTTCCAGCCTGGGTAGTGCTGGAACCCCAGAGCTTAGTCCAAGGATTGTTGATGGAATTGAAGATGGTAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 90 bp | GCCTTCTTGGATAACCTGGCAGTGGGATGGAGAATAATCCAGGTTTaGAGAATGATGAAGTTCACTGTCTGCTGGGTTTTGCTCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFLDNLAVGWRIIQV*RMMKFTVCWVLLVS Trigger: GCTCACGAGCAAAACCCAGCAGACAGTGAACTTCATCATTCTCCAAACCTGGATTATTCTCCATCCCACTGCCAGGTTATCCAAGAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 90 bp | CCTCAGGAACTGCAAGTGGCCTTCTTGGATAACCTGGCAGTGGGATaGAGAATAATCCAGGTTTGGAGAATGATGAAGTTCACTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQELQVAFLDNLAVG*RIIQVWRMMKFTVC Trigger: GCAGACAGTGAACTTCATCATTCTCCAAACCTGGATTATTCTCCATCCCACTGCCAGGTTATCCAAGAAGGCCACTTGCAGTTCCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCGCCTTCACATCAGCGTaGGTCTTGATCACTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RNCLLQYRGGSAFFWPLAAFTSA*VLITWS Trigger: AGACCAAGTGATCAAGACCAACGCTGATGTGAAGGC...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | AAAAGCCACAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAATGGATGGGAGTCTCTaGTTGATGCTTCCATTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KSHKGKLELSCSSGFGIEMDGSL*LMLPFP Trigger: GGGGAATGGAAGCATCAACAAGAGACTCCCATCCAT...TTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTGTGGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | CAAAGGCAAACTAGAGCTGTCATGCAGCAGTGGGTTTGGCATCGAAAACGGCCCTTGCTTCCAGTCTTTTaGCTATGTGAGACAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QRQTRAVMQQWVWHRKRPLLPVF*LCETED Trigger: ATCCTCTGTCTCACATAGCAAAAAGACTGGAAGCAA...GGGCCGTTTTCGATGCCAAACCCACTGCTGCATGACAGCTCTAGTTTGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 90 bp | AAGGTTGTATGTGAGGTCGTGCTGGATGTCTTCTACGAATTTGTGTaGATACTCTGGGTAAAGGCCCAGCACCTCAAAGAGACCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KVVCEVVLDVFYEFV*ILWVKAQHLKETFQ Trigger: CTGAAAGGTCTCTTTGAGGTGCTGGGCCTTTACCCAGAGTATGCACACAAATTCGTAGAAGACATCCAGCACGACCTCACATACAACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 90 bp | AGTTTCCTCATTGCTGTTACCATCTTCAATTCCATCAACAATCCTTaGACTAAGCTCTGGGGTTCCAGCACTACCCAGGCTGGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFLIAVTIFNSINNP*TKLWGSSTTQAGKL Trigger: CAGCTTTCCAGCCTGGGTAGTGCTGGAACCCCAGAGCTTAGTCCAAGGATTGTTGATGGAATTGAAGATGGTAACAGCAATGAGGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | ATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTTTGAATCTATCCCATaGTTGACTGACCAAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IEVALPFSGPLPSFLQNSFESIP*LTDQVV Trigger: GACAACTTGGTCAGTCAACAATGGGATAGATTCAAA...GGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | ACAAAAAGGAAAATAGATCAGCGGGAGCCATGCACTCCCGAGGCCAACAGTGCTAGCTGTAAGATCTCCTaGTTCAGATGCATTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TKRKIDQREPCTPEANSASCKIS*FRCIVM Trigger: CATCACAATGCATCTGAACAAGGAGATCTTACAGCT...AGCACTGTTGGCCTCGGGAGTGCATGGCTCCCGCTGATCTATTTTCCTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCTATGGGGAAACCCTTaGCCACTTGGGCATTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWLWGNP*PLGHWP Trigger: TGGCCAATGCCCAAGTGGCAAAGGGTTTCCCCATAG...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | AGACCCTCTGGGTCCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTGTGTCTGTTATGTCTTaGAATGAGGCCAGGAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSGSLDGYQSLSIRPVCVSVMS*NEARKR Trigger: CCTTTTCCTGGCCTCATTCAAAGACATAACAGACAC...ACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGGACCCAGAGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCAACCGACTTCCCACTaGAGAAGGCTGTTGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWQPTSH*RRLLSS Trigger: GGAGGACAACAGCCTTCTCAAGTGGGAAGTCGGTTG...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTAACTTTGCTCTTGTTAATCTGCTGCTaGGTTTCTTCAGCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SAFFWPLALFPAEFLTLLLLICC*VSSALM Trigger: CATCAAGGCTGAAGAAACCAAGCAGCAGATTAACAA...GAGCAAAGTTAGGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | AGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCCCCTTGCCACCTCACTGTTGAGCTaGTTAATCTGCTGCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RNCLLQYRGGSAFFWPLATSLLS*LICCLV Trigger: AACCAAGCAGCAGATTAACAAGCTCAACAGTGAGGT...GGCAAGGGGCCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTTTCTGGCCCCTTGCCCTCTTTCCTGCAGAATTCCTAACTTTGCTCTATACGTTTATGGCTTaGCTGTCCTTTACATCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SAFFWPLALFPAEFLTLLYTFMA*LSFTSA Trigger: AGCGGATGTAAAGGACAGCAAAGCCATAAACGTATA...GAGCAAAGTTAGGAATTCTGCAGGAAAGAGGGCAAGGGGCCAGAAAAAGGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 90 bp | AGTTGCATGATGCTTCTCATATCTCTCCCTAGCTGGGAAACCTCCTaGGTTAATGTTGTGACCTCACTGTTGAGCTTGTTAATCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCMMLLISLPSWETS*VNVVTSLLSLLICC Trigger: GCAGCAGATTAACAAGCTCAACAGTGAGGTCACAACATTAACTCAGGAGGTTTCCCAGCTAGGGAGAGATATGAGAAGCATCATGCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 90 bp | CTGGCACATTCGAACAGGGACAGCTGTAAGATCTCCTTGTTCAGATaGATTGTGATGTCAGAGCGCAGCTCATCTGGAAAGTCTTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAHSNRDSCKISLFR*IVMSERSSSGKSFK Trigger: TTTAAAAGACTTTCCAGATGAGCTGCGCTCTGACATCACAATGCATCTGAACAAGGAGATCTTACAGCTGTCCCTGTTCGAATGTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS GCA 90 bp | TTCCTGAGGCCAGTTGCTTTAAGCTCAAGCCTAGATAGGTCTTATTaGTTCCAGTCTTTTTGCTATGTGAGACAGAGGATCCCCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLRPVALSSSLDRSY*FQSFCYVRQRIPLC Trigger: ACACAAGGGGATCCTCTGTCTCACATAGCAAAAAGACTGGAAGCAATAAGACCTATCTAGGCTTGAGCTTAAAGCAACTGGCCTCAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS TCA 90 bp | ATCCTGGGCTCTGGCCTGATCTGTTCAGAGCCAAAGTCAAAAGTCTaGGTTTCCTCATTGCTGTTACCATCTTCAATTCCATCAACAATC | + |
|
Preference number: 5 (lower is better) Translates to: ILGSGLICSEPKSKV*VSSLLLPSSIPSTI Trigger: GATTGTTGATGGAATTGAAGATGGTAACAGCAATGAGGAAACTCAGACTTTTGACTTTGGCTCTGAACAGATCAGGCCAGAGCCCAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CAA 90 bp | CCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTAATACCTATACAACTGTCTGCTGGGTTTaGCTCGTGAGCTTCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PWMVTKVCQSDQYVNTYTTVCWV*LVSFSS Trigger: CGAACTGAAGCTCACGAGCAAAACCCAGCAGACAGT...TGTATAGGTATTAACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS TCA 90 bp | ATTCGAACAGGGACAGCTGTAAGATCTCCTTGTTCAGATGCATTGTaGTGTCAGAGCGCAGCTCATCTGGAAAGTCTTTTAAAAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IRTGTAVRSPCSDAL*CQSAAHLESLLKAH Trigger: ATGAGCTTTTAAAAGACTTTCCAGATGAGCTGCGCTCTGACATCACAATGCATCTGAACAAGGAGATCTTACAGCTGTCCCTGTTCGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CAA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGGTGGACAGGTCCTCATaGCCAATGAAACACACATTG | + |
|
Preference number: 5 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWVDRSS*PMKHTL Trigger: CAATGTGTGTTTCATTGGCAATGAGGACCTGTCCAC...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
||
| CDS-3UTR CAA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGCACTTGAGAAGGCTGTaGTCCTCCCTCTCCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWHLRRL*SSLSIF Trigger: AAAAATGGAGAGGGAGGACAACAGCCTTCTCAAGTG...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | CCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTAATACCTATACAGATGGGAGTCTCTTGTaGATGCTTCCATTCCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: PWMVTKVCQSDQYVNTYTDGSLL*MLPFPL Trigger: CAAGGGGAATGGAAGCATCAACAAGAGACTCCCATC...TGTATAGGTATTAACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | CTACAATCTAGAAATTGTTTGCTACAGTATAGAGGTGGCTCTGCCTTTTTCTGGTTGGTTTTAGGGGAGTaGGCACTGGAGACTCTGATA | + |
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Preference number: 5 (lower is better) Translates to: LQSRNCLLQYRGGSAFFWLVLGE*ALETLI Trigger: TATCAGAGTCTCCAGTGCCAACTCCCCTAAAACCAA...CCAGAAAAAGGCAGAGCCACCTCTATACTGTAGCAAACAATTTCTAGATTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 90 bp | ATCTTGATATTACATCACTCTCATGACCTTCTCGAAGGTTGTATGTaGGGTCGTGCTGGATGTCTTCTACGAATTTGTGTGCATACTCTG | + |
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Preference number: 5 (lower is better) Translates to: ILILHHSHDLLEGCM*GRAGCLLRICVHTL Trigger: CAGAGTATGCACACAAATTCGTAGAAGACATCCAGCACGACCTCACATACAACCTTCGAGAAGGTCATGAGAGTGATGTAATATCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 90 bp | GAGACTGTAGATTTGTTCGATAATCTTGATATTACATCACTCTCATaGCCTTCTCGAAGGTTGTATGTGAGGTCGTGCTGGATGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ETVDLFDNLDITSLS*PSRRLYVRSCWMSS Trigger: AGAAGACATCCAGCACGACCTCACATACAACCTTCGAGAAGGTCATGAGAGTGATGTAATATCAAGATTATCGAACAAATCTACAGTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | CCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTAATACCTATACACGCTTCAAAGATAACTaGGCCAGACTTGCTGACATA | + |
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Preference number: 5 (lower is better) Translates to: PWMVTKVCQSDQYVNTYTRFKDN*ARLADI Trigger: TATGTCAGCAAGTCTGGCCAAGTTATCTTTGAAGCG...TGTATAGGTATTAACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS-3UTR CAA 90 bp | CCTTGGATGGTTACCAAAGTCTGTCAATCAGACCAGTATGTTAATACCTATACAACATCAGCGTTGGTCTaGATCACTTGGTCTTTAATT | + |
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Preference number: 5 (lower is better) Translates to: PWMVTKVCQSDQYVNTYTTSALV*ITWSLI Trigger: AATTAAAGACCAAGTGATCAAGACCAACGCTGATGT...TGTATAGGTATTAACATACTGGTCTGATTGACAGACTTTGGTAACCATCCAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | AGGACGGCTCGGCTCCGTCTCCGGGCTGAGTCAAAGTaGCTCCCTGCTCTTGATCTTCCTTTGGTTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RTARLRLRAESK*LPALDLPLVLS Trigger: AGACAGAACCAAAGGAAGATCAAGAGCAGGGAGCCACTTTGACTCAGCCCGGAGACGGAGCCGAGCCGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | AGAACTCACCGGTCCGTGAGTGATGCTGCCCTCCTCTaGCCTACTTGGGAGAACCAGGTGCAAGGATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RTHRSVSDAALL*PTWENQVQGCF Trigger: GAAACATCCTTGCACCTGGTTCTCCCAAGTAGGTCAGAGGAGGGCAGCATCACTCACGGACCGGTGAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 72 bp | CTTGATGAACAGAAACGCAGCTCCGATCTCGGATTCTaGAAGGGGAGGGGAAATCCTGGGCTCTGGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LDEQKRSSDLGF*KGRGNPGLWPD Trigger: ATCAGGCCAGAGCCCAGGATTTCCCCTCCCCTTGCAGAATCCGAGATCGGAGCTGCGTTTCTGTTCATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | TGGGGAAACCCTTTGCCACTTGGGCATTGGCCAGGATaGAGTTGCTATGTGTTCCGTCGAAACGGGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: WGNPLPLGHWPG*SCYVFRRNGWQ Trigger: TTGCCACCCGTTTCGACGGAACACATAGCAACTTCATCCTGGCCAATGCCCAAGTGGCAAAGGGTTTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | GAGATGGACTGCAAAGGTGTCAGTGTGGTATCTGAATaGGGGGAGATGCACCTCAGGAACTGCAAGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: EMDCKGVSVVSE*GEMHLRNCKWP Trigger: AGGCCACTTGCAGTTCCTGAGGTGCATCTCCCCCCATTCAGATACCACACTGACACCTTTGCAGTCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 72 bp | ACTGTCTGCTGGGTTTTGCTCGTGAGCTTCAGTTCGTaGAGGGCTGCTGCCCACCAAGGATGGATCAACACT | + |
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Preference number: 6 (lower is better) Translates to: TVCWVLLVSFSS*RAAAHQGWINT Trigger: AGTGTTGATCCATCCTTGGTGGGCAGCAGCCCTCAACGAACTGAAGCTCACGAGCAAAACCCAGCAGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 90 bp | CAGCCCCGGCTGGCACATTCGAACAGGGACAGCTGTAAGATCTCCTaGTTCAGATGCATTGTGATGTCAGAGCGCAGCTCATCTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QPRLAHSNRDSCKIS*FRCIVMSERSSSGK Trigger: CTTTCCAGATGAGCTGCGCTCTGACATCACAATGCATCTGAACAAGGAGATCTTACAGCTGTCCCTGTTCGAATGTGCCAGCCGGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | CCCCAAACAAAAACTTGCAGCTGCAGCTCTTCTGCATaGCTTCAGTTCGTGCAAACCCGGCCAGCTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: PQTKTCSCSSSA*LQFVQTRPAHR Trigger: TCTGTGAGCTGGCCGGGTTTGCACGAACTGAAGTCATGCAGAAGAGCTGCAGCTGCAAGTTTTTGTTTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 72 bp | TCCACCCCAAACAAAAACTTGCAGCTGCAGCTCTTCTaGATGACTTCAGTTCGTGCAAACCCGGCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: STPNKNLQLQLF*MTSVRANPASS Trigger: TGAGCTGGCCGGGTTTGCACGAACTGAAGTCATGCAGAAGAGCTGCAGCTGCAAGTTTTTGTTTGGGGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 72 bp | TCCTCCTCATCTTCCACAATGGATGGGAGTCTCTTGTaGATGCTTCCATTCCCCTTGGGCTCTGCCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSTMDGSLL*MLPFPLGSACE Trigger: CTCACAGGCAGAGCCCAAGGGGAATGGAAGCATCAACAAGAGACTCCCATCCATTGTGGAAGATGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 90 bp | CTACCATGGTTAGGTGGGTCAGCTTCCTGCTTGGTTTTAGGGGAGTaGGCACTGGAGACTCTGATAGGTGAGTGGAATGGTACCGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPWLGGSASCLVLGE*ALETLIGEWNGTVP Trigger: AGGAACGGTACCATTCCACTCACCTATCAGAGTCTCCAGTGCCAACTCCCCTAAAACCAAGCAGGAAGCTGACCCACCTAACCATGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 90 bp | ATGAAGTTCACTGTCTGCTGGGTTTTGCTCGTGAGCTTCAGTTCGTaGAGGGCTGCTGCCCACCAAGGATGGATCAACACTCCAGATACC | + |
|
Preference number: 6 (lower is better) Translates to: MKFTVCWVLLVSFSS*RAAAHQGWINTPDT Trigger: GGTATCTGGAGTGTTGATCCATCCTTGGTGGGCAGCAGCCCTCAACGAACTGAAGCTCACGAGCAAAACCCAGCAGACAGTGAACTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | CGCAAAAGACGCAGCAGCCGAACAGTCTTCAGGAGATaGACGAGGGACACCACTGTGACATTGAAAGCATAC | + |
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Preference number: 6 (lower is better) Translates to: RKRRSSRTVFRR*TRDTTVTLKAY Trigger: GTATGCTTTCAATGTCACAGTGGTGTCCCTCGTTCATCTCCTGAAGACTGTTCGGCTGCTGCGTCTTTTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | TGTGCTCCACCTGCCTGCAAATGTAGGCAAGGCTGGTaGGCACTCCAACTCACCCTAGTCTGTAAACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CAPPACKCRQGW*ALQLTLVCKLS Trigger: AGAAAGTTTACAGACTAGGGTGAGTTGGAGTGCTCACCAGCCTTGCCTACATTTGCAGGCAGGTGGAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | GGTAAGTTTTCCAAACTGAAAGAACTCACCGGTCCGTaGGTGATGCTGCCCTCCTCTGACCTACTTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GKFSKLKELTGP*VMLPSSDLLGR Trigger: TCTCCCAAGTAGGTCAGAGGAGGGCAGCATCACTCACGGACCGGTGAGTTCTTTCAGTTTGGAAAACTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 72 bp | ATGCTGCCCTCCTCTGACCTACTTGGGAGAACCAGGTaGAAGGATGTTTCTGATGAGGAGCACACAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: MLPSSDLLGRTR*KDVSDEEHTED Trigger: ATCTTCTGTGTGCTCCTCATCAGAAACATCCTTGCACCTGGTTCTCCCAAGTAGGTCAGAGGAGGGCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | TTAGGGGAGTTGGCACTGGAGACTCTGATAGGTGAGTaGAATGGTACCGTTCCTGAGGCCAGTTGCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: LGELALETLIGE*NGTVPEASCFK Trigger: CTTAAAGCAACTGGCCTCAGGAACGGTACCATTCCACTCACCTATCAGAGTCTCCAGTGCCAACTCCCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 72 bp | TCTTCCTCCTCATCTTCCACAATGGATGGGAGTCTCTaGTTGATGCTTCCATTCCCCTTGGGCTCTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSTMDGSL*LMLPFPLGSAC Trigger: ACAGGCAGAGCCCAAGGGGAATGGAAGCATCAACAAGAGACTCCCATCCATTGTGGAAGATGAGGAGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 72 bp | TTAGGTGGGTCAGCTTCCTGCTTGGTTTTAGGGGAGTaGGCACTGGAGACTCTGATAGGTGAGTGGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: LGGSASCLVLGE*ALETLIGEWNG Trigger: ACCATTCCACTCACCTATCAGAGTCTCCAGTGCCAACTCCCCTAAAACCAAGCAGGAAGCTGACCCACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 72 bp | TGTGAGGTCGTGCTGGATGTCTTCTACGAATTTGTGTaGATACTCTGGGTAAAGGCCCAGCACCTCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: CEVVLDVFYEFV*ILWVKAQHLKE Trigger: CTCTTTGAGGTGCTGGGCCTTTACCCAGAGTATGCACACAAATTCGTAGAAGACATCCAGCACGACCTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | ATCTTCAATTCCATCAACAATCCTTGGACTAAGCTCTaGGGTTCCAGCACTACCCAGGCTGGAAAGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: IFNSINNPWTKL*GSSTTQAGKLH Trigger: GTGCAGCTTTCCAGCCTGGGTAGTGCTGGAACCCCAGAGCTTAGTCCAAGGATTGTTGATGGAATTGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 72 bp | CTGGCACATTCGAACAGGGACAGCTGTAAGATCTCCTaGTTCAGATGCATTGTGATGTCAGAGCGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LAHSNRDSCKIS*FRCIVMSERSS Trigger: TGAGCTGCGCTCTGACATCACAATGCATCTGAACAAGGAGATCTTACAGCTGTCCCTGTTCGAATGTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 90 bp | TTCTTCTCTTTCTTTCTACCATGGTTAGGTGGGTCAGCTTCCTGCTaGGTTTTAGGGGAGTTGGCACTGGAGACTCTGATAGGTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: FFSFFLPWLGGSASC*VLGELALETLIGEW Trigger: CCACTCACCTATCAGAGTCTCCAGTGCCAACTCCCCTAAAACCAAGCAGGAAGCTGACCCACCTAACCATGGTAGAAAGAAAGAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 90 bp | ACCTCACTGTTGAGCTTGTTAATCTGCTGCTTGGTTTCTTCAGCCTaGATGAACAGAAACGCAGCTCCGATCTCGGATTCTGCAAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TSLLSLLICCLVSSA*MNRNAAPISDSARG Trigger: TCCCCTTGCAGAATCCGAGATCGGAGCTGCGTTTCTGTTCATCAAGGCTGAAGAAACCAAGCAGCAGATTAACAAGCTCAACAGTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 72 bp | TCGAACAGGGACAGCTGTAAGATCTCCTTGTTCAGATaGATTGTGATGTCAGAGCGCAGCTCATCTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SNRDSCKISLFR*IVMSERSSSGK Trigger: CTTTCCAGATGAGCTGCGCTCTGACATCACAATGCATCTGAACAAGGAGATCTTACAGCTGTCCCTGTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | GTGCTGGATGTCTTCTACGAATTTGTGTGCATACTCTaGGTAAAGGCCCAGCACCTCAAAGAGACCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLDVFYEFVCIL*VKAQHLKETFQ Trigger: CTGAAAGGTCTCTTTGAGGTGCTGGGCCTTTACCCAGAGTATGCACACAAATTCGTAGAAGACATCCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 72 bp | TTCTTTCTACCATGGTTAGGTGGGTCAGCTTCCTGCTaGGTTTTAGGGGAGTTGGCACTGGAGACTCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: FFLPWLGGSASC*VLGELALETLI Trigger: TATCAGAGTCTCCAGTGCCAACTCCCCTAAAACCAAGCAGGAAGCTGACCCACCTAACCATGGTAGAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | TTTCAGGTTCTTCTCTTTCTTTCTACCATGGTTAGGTaGGTCAGCTTCCTGCTTGGTTTTAGGGGAGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FQVLLFLSTMVR*VSFLLGFRGVG Trigger: GCCAACTCCCCTAAAACCAAGCAGGAAGCTGACCCACCTAACCATGGTAGAAAGAAAGAGAAGAACCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | ATTGCTGTTACCATCTTCAATTCCATCAACAATCCTTaGACTAAGCTCTGGGGTTCCAGCACTACCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IAVTIFNSINNP*TKLWGSSTTQA Trigger: AGCCTGGGTAGTGCTGGAACCCCAGAGCTTAGTCCAAGGATTGTTGATGGAATTGAAGATGGTAACAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | CTGCAAGTGGCCTTCTTGGATAACCTGGCAGTGGGATaGAGAATAATCCAGGTTTGGAGAATGATGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQVAFLDNLAVG*RIIQVWRMMKF Trigger: GAACTTCATCATTCTCCAAACCTGGATTATTCTCCATCCCACTGCCAGGTTATCCAAGAAGGCCACTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | GGGACAGCTGTAAGATCTCCTTGTTCAGATGCATTGTaGTGTCAGAGCGCAGCTCATCTGGAAAGTCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GTAVRSPCSDAL*CQSAAHLESLL Trigger: TAAAAGACTTTCCAGATGAGCTGCGCTCTGACATCACAATGCATCTGAACAAGGAGATCTTACAGCTGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | GATAACCTGGCAGTGGGATGGAGAATAATCCAGGTTTaGAGAATGATGAAGTTCACTGTCTGCTGGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DNLAVGWRIIQV*RMMKFTVCWVL Trigger: CAAAACCCAGCAGACAGTGAACTTCATCATTCTCCAAACCTGGATTATTCTCCATCCCACTGCCAGGTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | TTACATCACTCTCATGACCTTCTCGAAGGTTGTATGTaGGGTCGTGCTGGATGTCTTCTACGAATTTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LHHSHDLLEGCM*GRAGCLLRICV Trigger: CACACAAATTCGTAGAAGACATCCAGCACGACCTCACATACAACCTTCGAGAAGGTCATGAGAGTGATGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CCA 72 bp | ACACGGATGAAGTCTTTTAGGTCCTTGGTTCTAGTGTaGTACAGGCTCCATCTAGAGTACATTCTCTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: TRMKSFRSLVLV*YRLHLEYILCM Trigger: CATACAGAGAATGTACTCTAGATGGAGCCTGTACCACACTAGAACCAAGGACCTAAAAGACTTCATCCGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 72 bp | CCAGTTGCTTTAAGCTCAAGCCTAGATAGGTCTTATTaGTTCCAGTCTTTTTGCTATGTGAGACAGAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PVALSSSLDRSY*FQSFCYVRQRI Trigger: GATCCTCTGTCTCACATAGCAAAAAGACTGGAAGCAATAAGACCTATCTAGGCTTGAGCTTAAAGCAACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 72 bp | AATGTTGTGACCTCACTGTTGAGCTTGTTAATCTGCTaGTTGGTTTCTTCAGCCTTGATGAACAGAAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: NVVTSLLSLLIC*LVSSALMNRNA Trigger: TGCGTTTCTGTTCATCAAGGCTGAAGAAACCAAGCAGCAGATTAACAAGCTCAACAGTGAGGTCACAACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | GATTTGTTCGATAATCTTGATATTACATCACTCTCATaGCCTTCTCGAAGGTTGTATGTGAGGTCGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DLFDNLDITSLS*PSRRLYVRSCW Trigger: CCAGCACGACCTCACATACAACCTTCGAGAAGGTCATGAGAGTGATGTAATATCAAGATTATCGAACAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS GCA 72 bp | GTTAATGTTGTGACCTCACTGTTGAGCTTGTTAATCTaGTGCTTGGTTTCTTCAGCCTTGATGAACAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VNVVTSLLSLLI*CLVSSALMNRN Trigger: GTTTCTGTTCATCAAGGCTGAAGAAACCAAGCAGCAGATTAACAAGCTCAACAGTGAGGTCACAACATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS CAA 72 bp | GTAGTGAATGCAAATGGATCTCGCTTCAAAGATAACTaGGCCAGACTTGCTGACATAAGTTGTTCGGAAATT | + |
|
Preference number: 6 (lower is better) Translates to: VVNANGSRFKDN*ARLADISCSEI Trigger: AATTTCCGAACAACTTATGTCAGCAAGTCTGGCCAAGTTATCTTTGAAGCGAGATCCATTTGCATTCACTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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| CDS TCA 72 bp | AGTCTTTTAAAAGCTCATTTGAATCTATCCCATTGTTaGCTGACCAAGTTGTCTGAAAGTACTCGAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLKAHLNLSHC*LTKLSESTRAS Trigger: GGATGCTCGAGTACTTTCAGACAACTTGGTCAGTCAACAATGGGATAGATTCAAATGAGCTTTTAAAAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039366.11 |
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