Pregenerated sensors for KCNH6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001901Ensembl transcript IDs: ENSMUST00000001965.14, ENSMUST00000106903.8, ENSMUST00000145539.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCGGGGTGGCCCTGTGGATGCTGAAGTAGCTGTAGGATGCGGCTaGGGTCTGACGACACGCGGGACTCCAGTCTGTTCATCTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SRGGPVDAEVAVGCG*GLTTRGTPVCSSGL Trigger: AAGCCCAGATGAACAGACTGGAGTCCCGCGTGTCGTCAGACCTCAGCCGCATCCTACAGCTACTTCAGCATCCACAGGGCCACCCCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR TCA 90 bp | TCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTCTaGTCATGTGCGGCCCCAAGCAAGACTCTCCCGAAGACCCGAAGC | + |
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Preference number: 1 (lower is better) Translates to: STLALGLSFGGRGWF*SCAAPSKTLPKTRS Trigger: GCTTCGGGTCTTCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR GCA 90 bp | GGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTCTGATCATGTaGGGCCCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GLGSELWRQRVVLIM*GPKQDSPEDPKHLS Trigger: AGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR TCA 90 bp | GATCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTaGGGTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: DLNRVSGIPAAWERS*GVQGGRKSGDHPVP Trigger: AGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACACCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR TCA 90 bp | CGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTaGGCTACCCCTGAGCAGCCCTCTGCCTGGCTTGCTGACTATAGG | + |
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Preference number: 1 (lower is better) Translates to: RRPEASLFSTDSYIL*ATPEQPSAWLADYR Trigger: CCTATAGTCAGCAAGCCAGGCAGAGGGCTGCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR TCA 90 bp | TGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTaGGGTATCCTGGGGGAGAAATTCCTGGGCATCCGGATATGTTTG | + |
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Preference number: 1 (lower is better) Translates to: CSEDGTRDLSIAAAT*GILGEKFLGIRICL Trigger: CAAACATATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR CCA 90 bp | GCTTTTGGTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTaGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCCAAGCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: AFGKDLVNPGLGSEL*RQRVVLIMCGPKQD Trigger: GTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTACCAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR CCA 90 bp | ACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGGTATCCTaGGGGAGAAATTCCTGGGCATCCGGATATGTTTGTCCAAATCAC | + |
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Preference number: 1 (lower is better) Translates to: TAPEICPLPRPREVS*GRNSWASGYVCPNH Trigger: GTGATTTGGACAAACATATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR TCA 90 bp | TGTGCAGAGGGCAGATGTCCCACCAGAAGCATCGACTCTGAACTCTaGGTCACTGAAGTTTCAGGAAACAAGGCCAGGTCACTGGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: CAEGRCPTRSIDSEL*VTEVSGNKARSLEA Trigger: TGCCTCCAGTGACCTGGCCTTGTTTCCTGAAACTTCAGTGACTCAGAGTTCAGAGTCGATGCTTCTGGTGGGACATCTGCCCTCTGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR CCA 90 bp | TGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTaGGCATCCGGATATGTTTGTCCAAATCACCATAGCTTAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: CPLPRPREVSWGRNS*ASGYVCPNHHSLGS Trigger: AGACCCTAAGCTATGGTGATTTGGACAAACATATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGACAAGGCCAGGTCACTaGAGGCAGGGGCCCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RCSGREEKWGPPSPCTSRTRPGH*RQGPPR Trigger: TCTTGGGGGCCCCTGCCTCCAGTGACCTGGCCTTGT...CCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR CAA 90 bp | CCTTGGGCTGCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATaGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PWAALVLRTAPEICP*PRPREVSWGRNSWA Trigger: TGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGCAGCCCAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTCCTGTGAGCTACCCCTaGGCAGCCCTCTGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLPVSYP*AALCLA Trigger: AGCCAGGCAGAGGGCTGCTCAGGGGTAGCTCACAGG...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGAGTCCCAGGCCTCTCTaGTCAGGCCATCCTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: VKIWSTLALGLSFGGRGWSPRPL*SGHPGH Trigger: GTGACCAGGATGGCCTGAGCAGAGAGGCCTGGGACT...CCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGGATCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGGGGGAGGGAGGAAAAGTaGGGACCACCCAGTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PGSEPCLWNSSCLGTELRGREEK*GPPSPC Trigger: ACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCC...CCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR CAA 90 bp | GCTCCCGAGGCCAGCAATCCAGCTTCTCTCGTGGGTTTGGGGGACTaGGGGGCATTTGCTGTAGCAATTCAGGCCAAAGCCCAGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: APEASNPASLVGLGD*GAFAVAIQAKAQMC Trigger: ACACATCTGGGCTTTGGCCTGAATTGCTACAGCAAATGCCCCCAAGTCCCCCAAACCCACGAGAGAAGCTGGATTGCTGGCCTCGGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGTATGGGAGAGCTGTCTaGCCCTCCATGGAAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQYGRAV*PSMEGG Trigger: GCCCCCTTCCATGGAGGGCCAGACAGCTCTCCCATA...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR-3UTR CCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCGACTCCCAGGGAGGCTaGGCCAAGTCCCAGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EDPKHLSSPLTLTSCELPDSQGG*AKSQAS Trigger: AGAGGCCTGGGACTTGGCCCAGCCTCCCTGGGAGTC...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR-3UTR CCA 90 bp | TTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATATCCAGCTTCTCTCGTaGGTTTGGGGGACTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: FVHCRGHVRYPGGEIPGHIQLLS*VWGTWG Trigger: CCCCCAAGTCCCCCAAACCCACGAGAGAAGCTGGAT...ATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCCAAGCAAGACTCTCCCGAGCCATCCTGGTCACCTaGTTCAGCAGTCTGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LEAEGGSDHVRPQARLSRAILVT*FSSLQF Trigger: AAACTGCAGACTGCTGAACCAGGTGACCAGGATGGC...TCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGGGCTGAGGGCTGCAGCTCTTTCTTTTATGTCCACCACAGAGGAAACCCTGCTCAGGCCATCCTaGTCACCTGGTTCAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: AEGLRAAALSFMSTTEETLLRPS*SPGSAV Trigger: GACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAG...GGTTTCCTCTGTGGTGGACATAAAAGAAAGAGCTGCAGCCCTCAGCCCCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR-3UTR TCA 90 bp | CAGAGATTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTAAGCCCAGATGTGTCTaGAATGCTCAGGGAAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: QRFVHCRGHVRYPGGEIPKPRCV*NAQGRG Trigger: GCCCCTTCCCTGAGCATTTCAGACACATCTGGGCTT...AGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGATCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGGCAGATGTGTCTGAAATaGTCAGGGAAGGGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PGSEPCLWNSSCLGTELRQMCLK*SGKGQH Trigger: GTGCTGCCCCTTCCCTGAGCATTTCAGACACATCTG...CCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGTGGGGGAGAAATTCCTaGGCATCCGGATATGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: ALVLRTAPEICPLPRPREWGRNS*ASGYVC Trigger: ACAAACATATCCGGATGCCCAGGAATTTCTCCCCCA...CTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGATCGACTCTGAACTCTaGGTCACTGAAGTTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ALVLRTAPEICPLPRPREIDSEL*VTEVSG Trigger: TCCTGAAACTTCAGTGACTCAGAGTTCAGAGTCGAT...CTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTGTTTTCAGAGTTTTATaGGAGAGCTGTCTGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KDLVNPGLGSELWRQRVVVFRVL*ESCLAL Trigger: GAGGGCCAGACAGCTCTCCCATAAAACTCTGAAAAC...AACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR TCA 72 bp | GCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTCTaGTCATGTGCGGCCCCAAGCAAGACTCTCCCGAAG | + |
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Preference number: 3 (lower is better) Translates to: ALGLSFGGRGWF*SCAAPSKTLPK Trigger: CTTCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR TCA 72 bp | GGCCCTGTGGATGCTGAAGTAGCTGTAGGATGCGGCTaGGGTCTGACGACACGCGGGACTCCAGTCTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: GPVDAEVAVGCG*GLTTRGTPVCS Trigger: TGAACAGACTGGAGTCCCGCGTGTCGTCAGACCTCAGCCGCATCCTACAGCTACTTCAGCATCCACAGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGGTGGGTTTGGGGGACTaGGGGGCATTTGCTGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: RCSGREEKWGPPSPCTSRVGLGD*GAFAVA Trigger: TGCTACAGCAAATGCCCCCAAGTCCCCCAAACCCAC...CCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR GCA 72 bp | TCTGAGCTTTGGAGGCAGAGGGTGGTTCTGATCATGTaGGGCCCCAAGCAAGACTCTCCCGAAGACCCGAAG | + |
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Preference number: 3 (lower is better) Translates to: SELWRQRVVLIM*GPKQDSPEDPK Trigger: CTTCGGGTCTTCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAAAGCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR CCA 72 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTaGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: KDLVNPGLGSEL*RQRVVLIMCGP Trigger: GGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| 3UTR-3UTR CAA 90 bp | CAGAGATTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGCTTCTCTCGTGGGTTaGGGGGACTTGGGGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: QRFVHCRGHVRYPGGEIPASLVG*GDLGAF Trigger: AAATGCCCCCAAGTCCCCCAAACCCACGAGAGAAGC...AGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR GCA 72 bp | AATCCAGGATCTGAACCGTGTCTCTGGAATTCCAGCTaGTTGGGAACGGAGCTGAGGTGTTCAGGGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: NPGSEPCLWNSS*LGTELRCSGRE Trigger: CTCCCTCCCTGAACACCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATCCTGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| 3UTR CCA 72 bp | CCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTaGGCATCCGGATATGTTTGTCCAAATCACCATAGC | + |
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Preference number: 3 (lower is better) Translates to: PRPREVSWGRNS*ASGYVCPNHHS Trigger: GCTATGGTGATTTGGACAAACATATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | CGGCCCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACGCCCCAAGCAGGGCCTaGGCCAGGCGGGACACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RPQARLSRRPEASLFSTDAPSRA*ARRDTA Trigger: TGCTGTGTCCCGCCTGGCGCAGGCCCTGCTTGGGGC...GTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATCCGGATAGCACGTCGCCCAGGTaGACCAGCGTGTCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HCRGHVRYPGGEIPGHPDSTSPR*TSVSPG Trigger: GCCTGGGGACACGCTGGTGCACCTGGGCGACGTGCT...ATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR TCA 90 bp | CGGCCCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACCCGCTTGGCCTGCTGTaGGAGCCCTCAGAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RPQARLSRRPEASLFSTDPLGLL*EPSEPR Trigger: CCTGGGCTCTGAGGGCTCTCACAGCAGGCCAAGCGG...GTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCAAGGCGGGGCAGTGCTaGAACAGAGCGCGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGLGSELWRQRVVLIMCGKAGQC*NRARCR Trigger: CCTGCACCGCGCTCTGTTGCAGCACTGCCCCGCCTT...GCCGCACATGATCAGAACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATCCGGATTGCGGCTGCTGCTCTTaGCCAGGAGCTGGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HCRGHVRYPGGEIPGHPDCGCCS*PGAGPG Trigger: ACCTGGCCCAGCTCCTGGCCAAGAGCAGCAGCCGCA...ATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | CAGAGATTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGCCCCAAGCAGGGCCTaGGCCAGGCGGGACACAGCA | + |
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Preference number: 4 (lower is better) Translates to: QRFVHCRGHVRYPGGEIPAPSRA*ARRDTA Trigger: TGCTGTGTCCCGCCTGGCGCAGGCCCTGCTTGGGGC...AGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | CCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAGCCCTCTGCCTGGCTTGGGGTCAGGCTGCGGCTaGTGCTCTTGGCCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PLTLTSCELPLSSPLPGLGSGCG*CSWPGA Trigger: AGCTCCTGGCCAAGAGCAGCAGCCGCAGCCTGACCC...CAAGCCAGGCAGAGGGCTGCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | AGGTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGAGGCCCCTGTCCGCTTaGCCTGCTGTGAGAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: RCSGREEKWGPPSPCTSRRPLSA*PAVRAL Trigger: GAGGGCTCTCACAGCAGGCCAAGCGGACAGGGGCCT...CCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR TCA 90 bp | GAGATTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGGCCTGTCGGGGTGTTaGGTGGAGACCCCCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: EICPLPRPREVSWGRNSWGLSGC*VETPIC Trigger: GCAGATGGGGGTCTCCACTCAACACCCCGACAGGCC...CCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | CCAGGATCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGGTCAGGCTGCGGCTGCTaGTCTTGGCCAGGAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PGSEPCLWNSSCLGTELRSGCGC*SWPGAG Trigger: CCCAGCTCCTGGCCAAGAGCAGCAGCCGCAGCCTGA...CCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | CCAGGATCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGGGGGTCAGGCTGCGGCTaGTGCTCTTGGCCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGSEPCLWNSSCLGTELRGSGCG*CSWPGA Trigger: AGCTCCTGGCCAAGAGCAGCAGCCGCAGCCTGACCC...CCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | GTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGGGTGCCGTTATAGTGCTTaGCAAGCTGCGCGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VFREGGKVGTTQSLYFQGCRYSA*QAARPG Trigger: GCCTGGGCGCGCAGCTTGGCAAGCACTATAACGGCA...CCCCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTAGCACGTCGCCCAGGTaGACCAGCGTGTCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KDLVNPGLGSELWRQRVVSTSPR*TSVSPG Trigger: GCCTGGGGACACGCTGGTGCACCTGGGCGACGTGCT...AACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGATACTTGCCCCTGCCTaGACCAGGCCCCTGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVLRTAPEICPLPRPREILAPA*TRPLSA Trigger: AGCGGACAGGGGCCTGGTCCAGGCAGGGGCAAGTAT...CTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | AGGTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGAAGCCTTGGGGGTCTTaGTTGCCTGGGGCCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RCSGREEKWGPPSPCTSRKPWGS*LPGACR Trigger: CCGACAGGCCCCAGGCAACCAAGACCCCCAAGGCTT...CCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR TCA 90 bp | CCCGAGGCCAGCAATCCAGCTTCTCTCGTGGGTTTGGGGGACTTGGGGGCATTTGAGTGTTCGGGCCAGTaGGGAAGTCACAGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEASNPASLVGLGDLGAFECSGQ*GSHRYR Trigger: CCTGTACCTGTGACTTCCTCACTGGCCCGAACACTC...AAATGCCCCCAAGTCCCCCAAACCCACGAGAGAAGCTGGATTGCTGGCCTCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTTCAGGCTGCGGCTGCTaGTCTTGGCCAGGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KDLVNPGLGSELWRQRVVSGCGC*SWPGAG Trigger: CCCAGCTCCTGGCCAAGAGCAGCAGCCGCAGCCTGA...AACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | AGGTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGAACGTTGGGTCAGGCTaGGGCTGCTGCTCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCSGREEKWGPPSPCTSRNVGSG*GCCSWP Trigger: TGGCCAAGAGCAGCAGCCGCAGCCTGACCCAACGTT...CCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | GTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGCCTGTCCGCTTGGCCTaGTGTGAGAGCCCTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKIWSTLALGLSFGGRGWPVRLA*CESPQS Trigger: GCTCTGAGGGCTCTCACAGCAGGCCAAGCGGACAGG...CCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATCCGGATTACTCTTCCAGGCGCTaGCTCAGTGGGTTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HCRGHVRYPGGEIPGHPDYSSRR*LSGLGI Trigger: GATCCCCAACCCACTGAGGCAGCGCCTGGAAGAGTA...ATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGAGGCCCCTGTCCGCTTaGCCTGCTGTGAGAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQRPLSA*PAVRAL Trigger: GAGGGCTCTCACAGCAGGCCAAGCGGACAGGGGCCT...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAGCCCTCTGCCTGGCTTGAGAGGGTCCCGAGGCTaGGTCGCTGCCGTTATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLTLTSCELPLSSPLPGLRGSRG*VAAVIV Trigger: CACTATAACGGCAGCGACCCAGCCTCGGGACCCTCT...CAAGCCAGGCAGAGGGCTGCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGTTGCCTGGTCTGGCATaGAGACTGGCAGGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVLRTAPEICPLPRPRELPGLA*RLAGSP Trigger: TGGGGAGCCTGCCAGTCTCCATGCCAGACCAGGCAA...CTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | GTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGACAAGGCCAGGTCACTaGAGGCAGGGGCCCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKIWSTLALGLSFGGRGWTRPGH*RQGPPR Trigger: TCTTGGGGGCCCCTGCCTCCAGTGACCTGGCCTTGT...CCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCCAAGCAAGACTCTCCCGATGGTACCTCGGTGAATaGGCGGTGCCTGCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEAEGGSDHVRPQARLSRWYLGE*AVPAAC Trigger: ACAAGCTGCAGGCACCGCGCATTCACCGAGGTACCA...TCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | AGGTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGTGGTACCTCGGTGAATaGGCGGTGCCTGCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCSGREEKWGPPSPCTSRWYLGE*AVPAAC Trigger: ACAAGCTGCAGGCACCGCGCATTCACCGAGGTACCA...CCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | GTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTGTGGTAGCGAGCCGTaGCTGAGTACAGGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKIWSTLALGLSFGGRGWCGSEP*LSTGAG Trigger: TCCAGCGCCTGTACTCAGGCACGGCTCGCTACCACA...CCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTTGCGGCTGCTGCTCTTaGCCAGGAGCTGGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLCGCCS*PGAGPG Trigger: ACCTGGCCCAGCTCCTGGCCAAGAGCAGCAGCCGCA...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGATACTTGCCCCTGCCTaGACCAGGCCCCTGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQILAPA*TRPLSA Trigger: AGCGGACAGGGGCCTGGTCCAGGCAGGGGCAAGTAT...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCGTCTGGCATGGAGACTaGCAGGCTCCCCAAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLGSELWRQRVVLIMCGVWHGD*QAPQRC Trigger: ACATCTTTGGGGAGCCTGCCAGTCTCCATGCCAGAC...GCCGCACATGATCAGAACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATCCGGATGTCTGGCATGGAGACTaGCAGGCTCCCCAAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HCRGHVRYPGGEIPGHPDVWHGD*QAPQRC Trigger: ACATCTTTGGGGAGCCTGCCAGTCTCCATGCCAGAC...ATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR TCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCGGCCTGTCGGGGTGTTaGGTGGAGACCCCCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EDPKHLSSPLTLTSCELPGLSGC*VETPIC Trigger: GCAGATGGGGGTCTCCACTCAACACCCCGACAGGCC...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR TCA 90 bp | CCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAGCCCTCTGCCTGGCTTGGGAAGGGGCAGCACCTaGTTGGCTGTCATTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLTLTSCELPLSSPLPGLGRGST*LAVIEE Trigger: TTCCTCAATGACAGCCAATCAGGTGCTGCCCCTTCC...CAAGCCAGGCAGAGGGCTGCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR TCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCGCTTGGGAACGGAGCTaGGGTGTTCAGGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSAWERS*GVQGGR Trigger: CCTCCCTCCCTGAACACCTCAGCTCCGTTCCCAAGC...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGCAGGTACAGGGTCGCTaGATCACCTCCACACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQQVQGR*ITSTRE Trigger: CTCCCGTGTGGAGGTGATGCAGCGACCCTGTACCTG...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CCAGGATCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGGCCGAGGCTGGGTCGCTaGCGTTATAGTGCTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSEPCLWNSSCLGTELRPRLGR*RYSACQ Trigger: TTGGCAAGCACTATAACGGCAGCGACCCAGCCTCGG...CCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | CATAGCTTAGGGTCTGTGCAGAGGGCAGATGTCCCACCAGAAGCATCGACTCTGTGTGGTAGCGAGCCGTaGCTGAGTACAGGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSLGSVQRADVPPEASTLCGSEP*LSTGAG Trigger: TCCAGCGCCTGTACTCAGGCACGGCTCGCTACCACA...CAGAGTCGATGCTTCTGGTGGGACATCTGCCCTCTGCACAGACCCTAAGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | TGGAGCTGTTCTAACTTAAAGCCTAGCTCCCGAGGCCAGCAATCCAGCTTCTCTAAGGCGGGGCAGTGCTaGAACAGAGCGCGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WSCSNLKPSSRGQQSSFSKAGQC*NRARCR Trigger: CCTGCACCGCGCTCTGTTGCAGCACTGCCCCGCCTT...AGAGAAGCTGGATTGCTGGCCTCGGGAGCTAGGCTTTAAGTTAGAACAGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTAAGCCTTGGGGGTCTTaGTTGCCTGGGGCCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLKPWGS*LPGACR Trigger: CCGACAGGCCCCAGGCAACCAAGACCCCCAAGGCTT...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | AGGTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGTTGAGGAAGAAGCCTTaGGGGTCTTGGTTGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCSGREEKWGPPSPCTSRLRKKP*GSWLPG Trigger: CCCAGGCAACCAAGACCCCCAAGGCTTCTTCCTCAA...CCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR TCA 90 bp | GCTGAGGGGCTGAGGGCTGCAGCTCTTTCTTTTATGTCCACCACAGAGGAAACCGAGTGTTCGGGCCAGTaGGGAAGTCACAGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEGLRAAALSFMSTTEETECSGQ*GSHRYR Trigger: CCTGTACCTGTGACTTCCTCACTGGCCCGAACACTC...GGTTTCCTCTGTGGTGGACATAAAAGAAAGAGCTGCAGCCCTCAGCCCCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR TCA 90 bp | AATCCAGGATCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGAATGGTACCTCGGTaGATGCGCGGTGCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NPGSEPCLWNSSCLGTELRMVPR*MRGACS Trigger: GCTGCAGGCACCGCGCATTCACCGAGGTACCATTCT...CAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATCCTGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR TCA 90 bp | TTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATAACAAGAGCAACAAGTaGCAGGGACCAGGGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVHCRGHVRYPGGEIPGHNKSNK*QGPGLG Trigger: TCCCAGCCCTGGTCCCTGTCACTTGTTGCTCTTGTT...ATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | TCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGGTGTTCACAGGTACAGGGTCGCTaGATCACCTCCACACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEPCLWNSSCLGTELRCSQVQGR*ITSTRE Trigger: CTCCCGTGTGGAGGTGATGCAGCGACCCTGTACCTG...TGAACACCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTAACGTTGGGTCAGGCTaGGGCTGCTGCTCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLNVGSG*GCCSWP Trigger: TGGCCAAGAGCAGCAGCCGCAGCCTGACCCAACGTT...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | TGGAGCTGTTCTAACTTAAAGCCTAGCTCCCGAGGCCAGCAATCCAGCTTCTCTCCTGTCCGCTTGGCCTaGTGTGAGAGCCCTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSCSNLKPSSRGQQSSFSPVRLA*CESPQS Trigger: GCTCTGAGGGCTCTCACAGCAGGCCAAGCGGACAGG...AGAGAAGCTGGATTGCTGGCCTCGGGAGCTAGGCTTTAAGTTAGAACAGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR GCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCTGCCGTTATAGTGCTTaGCAAGCTGCGCGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSCRYSA*QAARPG Trigger: GCCTGGGCGCGCAGCTTGGCAAGCACTATAACGGCA...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAGGAGCCCCTTGGGCTaGTCTTGTTCTGAGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSRSPLG*SCSEDG Trigger: GCCGTCCTCAGAACAAGAGCAGCCCAAGGGGCTCCT...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATCCGGATAGGAACTTACGACTCTaGCCCTCAAACTTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HCRGHVRYPGGEIPGHPDRNLRL*PSNLRM Trigger: CATCCGCAAGTTTGAGGGCCAGAGTCGTAAGTTCCT...ATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGTCTCAATCTCTGTGGTaGAGCCTGAGCGGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVLRTAPEICPLPRPRESQSLW*SLSGAS Trigger: AGAAGCACCGCTCAGGCTCCACCACAGAGATTGAGA...CTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | GTAGCAATTCAGGCCAAAGCCCAGATGTGTCTGAAATGCTCAGGGAAGGGGCAGAGAGGGTCCCGAGGCTaGGTCGCTGCCGTTATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAIQAKAQMCLKCSGKGQRGSRG*VAAVIV Trigger: CACTATAACGGCAGCGACCCAGCCTCGGGACCCTCT...CTGCCCCTTCCCTGAGCATTTCAGACACATCTGGGCTTTGGCCTGAATTGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | CCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAGCCCTCTGCCTGGCTTGGTGACATACTTGTCTTaGACAGAGGGTCCCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTLTSCELPLSSPLPGLVTYLS*TEGPEA Trigger: AGCCTCGGGACCCTCTGTCCAAGACAAGTATGTCAC...CAAGCCAGGCAGAGGGCTGCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCTTGCCTGGTCTGGCATaGAGACTGGCAGGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSLPGLA*RLAGSP Trigger: TGGGGAGCCTGCCAGTCTCCATGCCAGACCAGGCAA...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | GTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGAGCAGGTCTGCTCGATaGATCTTGTGCAGGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKIWSTLALGLSFGGRGWSRSAR*ILCRSQ Trigger: CTGCGACCTGCACAAGATCCATCGAGCAGACCTGCT...CCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| 3UTR CAA 72 bp | GCCAGCAATCCAGCTTCTCTCGTGGGTTTGGGGGACTaGGGGGCATTTGCTGTAGCAATTCAGGCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASNPASLVGLGD*GAFAVAIQAKA Trigger: GGCTTTGGCCTGAATTGCTACAGCAAATGCCCCCAAGTCCCCCAAACCCACGAGAGAAGCTGGATTGCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| 3UTR CAA 72 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATaGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALVLRTAPEICP*PRPREVSWGRN Trigger: ATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| 3UTR CAA 72 bp | CCAGGATCTGAACCGTGTCTCTGGAATTCCAGCTGCTaGGGAACGGAGCTGAGGTGTTCAGGGAGGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSEPCLWNSSC*GTELRCSGREE Trigger: TTCCTCCCTCCCTGAACACCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGATCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR TCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCAGAATGGTACCTCGGTaGATGCGCGGTGCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDPKHLSSPLTLTSCELPRMVPR*MRGACS Trigger: GCTGCAGGCACCGCGCATTCACCGAGGTACCATTCT...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTCCGAGGCTGGGTCGCTaGCGTTATAGTGCTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLPRLGR*RYSACQ Trigger: TTGGCAAGCACTATAACGGCAGCGACCCAGCCTCGG...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGCATCGGCGCTTGATTTaGCTGGTCTGGCATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQHRRLI*LVWHGD Trigger: GTCTCCATGCCAGACCAGGCAAATCAAGCGCCGATG...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | GTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGGGATTCCAGAAGGTATCTaGAAAGGCGGGGTACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFREGGKVGTTQSLYFQGIPEGI*KGGVHV Trigger: GACATGTACCCCGCCTTTGCAGATACCTTCTGGAAT...CCCCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CCA 90 bp | CGGCCCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACAGGAACTTACGACTCTaGCCCTCAAACTTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RPQARLSRRPEASLFSTDRNLRL*PSNLRM Trigger: CATCCGCAAGTTTGAGGGCCAGAGTCGTAAGTTCCT...GTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCCCAGGCAGCGGAAGCTaGAGGCATCCTTGCGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSPGSGS*RHPCDS Trigger: ACTATCGCAAGGATGCCTCCAGCTTCCGCTGCCTGG...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CAGAGATTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGCTGTAGTGCAGAATaGTACCTCGGTGAATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QRFVHCRGHVRYPGGEIPGCSAE*YLGECA Trigger: CGCGCATTCACCGAGGTACCATTCTGCACTACAGCC...AGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATGTGACATACTTGTCTTaGACAGAGGGTCCCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVHCRGHVRYPGGEIPGHVTYLS*TEGPEA Trigger: AGCCTCGGGACCCTCTGTCCAAGACAAGTATGTCAC...ATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGTTGAGGAAGAAGCCTTaGGGGTCTTGGTTGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQLRKKP*GSWLPG Trigger: CCCAGGCAACCAAGACCCCCAAGGCTTCTTCCTCAA...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTCCACGTGAGGTATCCTaGGGGAGAAATTCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDLVNPGLGSELWRQRVVPREVS*GRNSWA Trigger: TGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGG...AACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCGTGACAGGAGCCCCTTaGGCTGCTCTTGTTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSVTGAP*AALVLR Trigger: CCTCAGAACAAGAGCAGCCCAAGGGGCTCCTGTCAC...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCGGGAGGGAGGAAAAGTaGGGACCACCCAGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDPKHLSSPLTLTSCELPGREEK*GPPSPC Trigger: ACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCC...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR TCA 90 bp | CCCGAGGCCAGCAATCCAGCTTCTCTCGTGGGTTTGGGGGACTTGGGGGCATTTCATCATTGCAGTAGATaGTGGCACAGTTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PEASNPASLVGLGDLGAFHHCSR*WHSSPS Trigger: AGATGGAGAACTGTGCCATCATCTACTGCAATGATG...AAATGCCCCCAAGTCCCCCAAACCCACGAGAGAAGCTGGATTGCTGGCCTCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR TCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTTGGAGCCGCGGGAGATaGAGTAGAGAGTGGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLWSRGR*SREWKA Trigger: TGCTTTCCACTCTCTACTTCATCTCCCGCGGCTCCA...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR TCA 90 bp | TCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGGTGTTCATGGAGCCGCGGGAGATaGAGTAGAGAGTGGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEPCLWNSSCLGTELRCSWSRGR*SREWKA Trigger: TGCTTTCCACTCTCTACTTCATCTCCCGCGGCTCCA...TGAACACCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR TCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAAGCCCAGATGTGTCTaGAATGCTCAGGGAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSKPRCV*NAQGRG Trigger: GCCCCTTCCCTGAGCATTTCAGACACATCTGGGCTT...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR TCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCGGGCTGCTCTTGTTCTaGGGACGGCACCAGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSGLLLF*GRHQRF Trigger: AAATCTCTGGTGCCGTCCTCAGAACAAGAGCAGCCC...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR TCA 90 bp | CCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAGCCCTCTGCCTGGCTTGTGTGAATCCAGGATCTaGACCGTGTCTCTGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLTLTSCELPLSSPLPGLCESRI*TVSLEF Trigger: GAATTCCAGAGACACGGTTCAGATCCTGGATTCACA...CAAGCCAGGCAGAGGGCTGCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGAAGCTGAGCGTGAACTaGGGGATCTGGCTGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQKLSVN*GIWLTV Trigger: AACTGTCAGCCAGATCCCGCAGTTCACGCTCAGCTT...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CATAGCTTAGGGTCTGTGCAGAGGGCAGATGTCCCACCAGAAGCATCGACTCTGAAGCTGAGCGTGAACTaGGGGATCTGGCTGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGSVQRADVPPEASTLKLSVN*GIWLTV Trigger: AACTGTCAGCCAGATCCCGCAGTTCACGCTCAGCTT...CAGAGTCGATGCTTCTGGTGGGACATCTGCCCTCTGCACAGACCCTAAGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR GCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCTACTCTTCCAGGCGCTaGCTCAGTGGGTTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EDPKHLSSPLTLTSCELPYSSRR*LSGLGI Trigger: GATCCCCAACCCACTGAGGCAGCGCCTGGAAGAGTA...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTTCTCAATCTCTGTGGTaGAGCCTGAGCGGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KDLVNPGLGSELWRQRVVSQSLW*SLSGAS Trigger: AGAAGCACCGCTCAGGCTCCACCACAGAGATTGAGA...AACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTGGCTGTAGTGCAGAATaGTACCTCGGTGAATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLGCSAE*YLGECA Trigger: CGCGCATTCACCGAGGTACCATTCTGCACTACAGCC...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGAGACCTTCTCAGAGTTaGTGTTGGGTGACACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALVLRTAPEICPLPRPRERPSQS*CWVTHC Trigger: GCAATGTGTCACCCAACACCAACTCTGAGAAGGTCT...CTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | CAGAGATTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTCATTCTTCCCTAGAATaGCCACGACCACGTCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: QRFVHCRGHVRYPGGEIPHSSLE*PRPRHR Trigger: GCGATGACGTGGTCGTGGCCATTCTAGGGAAGAATG...AGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CCA 90 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTTTGATTTGCCTGGTCTaGCATGGAGACTGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KDLVNPGLGSELWRQRVVLICLV*HGDWQA Trigger: AGCCTGCCAGTCTCCATGCCAGACCAGGCAAATCAA...AACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCATCCAGCTTCTCTCGTaGGTTTGGGGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDPKHLSSPLTLTSCELPIQLLS*VWGTWG Trigger: CCCCCAAGTCCCCCAAACCCACGAGAGAAGCTGGAT...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR TCA 90 bp | TTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCCAAGCAAGACTCTCCCGACATCATTGCAGTAGATaGTGGCACAGTTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LEAEGGSDHVRPQARLSRHHCSR*WHSSPS Trigger: AGATGGAGAACTGTGCCATCATCTACTGCAATGATG...TCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACCCCAGGGACAGGACCTaGGTGACCTTTTCAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QARLSRRPEASLFSTDSYPRDRT*VTFSVT Trigger: TGTCACTGAAAAGGTCACGCAGGTCCTGTCCCTGGG...GTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACAGGGTCGCTCCACATTaGCGATGGCGTACCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: QARLSRRPEASLFSTDSYRVAPH*RWRTRY Trigger: GTATCTGGTACGCCATCGGCAATGTGGAGCGACCCT...GTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR GCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCCAGATGTGTCTGAAATaGTCAGGGAAGGGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSQMCLK*SGKGQH Trigger: GTGCTGCCCCTTCCCTGAGCATTTCAGACACATCTG...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | CGGCCCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTCCATCTGTGCATTaGCAATCAGGAACTTACGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPQARLSRRPEASLFSTDSPSVH*QSGTYD Trigger: GTCGTAAGTTCCTGATTGCCAATGCACAGATGGAGA...GTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGGGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGTCTCCATCTGTGCATTaGCAATCAGGAACTTACGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALVLRTAPEICPLPRPRESPSVH*QSGTYD Trigger: GTCGTAAGTTCCTGATTGCCAATGCACAGATGGAGA...CTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCCATTCTTCCCTAGAATaGCCACGACCACGTCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSHSSLE*PRPRHR Trigger: GCGATGACGTGGTCGTGGCCATTCTAGGGAAGAATG...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | TCTGAACCGTGTCTCTGGAATTCCAGCTGCTTGGGAACGGAGCTGAGGTGTTCATTGATTTGCCTGGTCTaGCATGGAGACTGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEPCLWNSSCLGTELRCSLICLV*HGDWQA Trigger: AGCCTGCCAGTCTCCATGCCAGACCAGGCAAATCAA...TGAACACCTCAGCTCCGTTCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTGGGGCAGCACCTGATTaGCTGTCATTGAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLGAAPD*LSLRKK Trigger: CTTCTTCCTCAATGACAGCCAATCAGGTGCTGCCCC...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTTCTCTCGTGGGTTTaGGGGACTTGGGGGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EDPKHLSSPLTLTSCELPLLSWV*GTWGHL Trigger: CAAATGCCCCCAAGTCCCCCAAACCCACGAGAGAAG...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAGCTGGAGGCATCCTTaGGATAGTAGAGGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSSWRHP*DSRGCP Trigger: TGGACATCCTCTACTATCGCAAGGATGCCTCCAGCT...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTATTCCAGAAGGTATCTaGAAAGGCGGGGTACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDLVNPGLGSELWRQRVVIPEGI*KGGVHV Trigger: GACATGTACCCCGCCTTTGCAGATACCTTCTGGAAT...AACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTTCTGAACCGTGTCTCTaGAATTCCAGCTGCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLSEPCL*NSSCLG Trigger: TCCCAAGCAGCTGGAATTCCAGAGACACGGTTCAGA...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR TCA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGATCGACTCTGAACTCTaGGTCACTGAAGTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQIDSEL*VTEVSG Trigger: TCCTGAAACTTCAGTGACTCAGAGTTCAGAGTCGAT...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGTAGCAATTCAGGCCAAAGCCCAGATGTGTCTGAAATGCTCAGGGAAGCATCGGCGCTTGATTTaGCTGGTCTGGCATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FAVAIQAKAQMCLKCSGKHRRLI*LVWHGD Trigger: GTCTCCATGCCAGACCAGGCAAATCAAGCGCCGATG...CTTCCCTGAGCATTTCAGACACATCTGGGCTTTGGCCTGAATTGCTACAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CCA 90 bp | CCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGAGCAGACCTTCTCAGAGTTaGTGTTGGGTGACACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PKHLSSPLTLTSCELPLSRPSQS*CWVTHC Trigger: GCAATGTGTCACCCAACACCAACTCTGAGAAGGTCT...GCTCAGGGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR GCA 90 bp | ATTTGCTGTAGCAATTCAGGCCAAAGCCCAGATGTGTCTGAAATGCTCAGGGAACCCAGGGACAGGACCTaGGTGACCTTTTCAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ICCSNSGQSPDVSEMLREPRDRT*VTFSVT Trigger: TGTCACTGAAAAGGTCACGCAGGTCCTGTCCCTGGG...TTCCCTGAGCATTTCAGACACATCTGGGCTTTGGCCTGAATTGCTACAGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGCTGTAGCAATTCAGGCCAAAGCCCAGATGTGTCTGAAATGCTCAGGGAAAGGGTCGCTCCACATTaGCGATGGCGTACCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ICCSNSGQSPDVSEMLRERVAPH*RWRTRY Trigger: GTATCTGGTACGCCATCGGCAATGTGGAGCGACCCT...TTCCCTGAGCATTTCAGACACATCTGGGCTTTGGCCTGAATTGCTACAGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGCTGTAGCAATTCAGGCCAAAGCCCAGATGTGTCTGAAATGCTCAGGGAAAGCAGGTCTGCTCGATaGATCTTGTGCAGGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICCSNSGQSPDVSEMLRESRSAR*ILCRSQ Trigger: CTGCGACCTGCACAAGATCCATCGAGCAGACCTGCT...TTCCCTGAGCATTTCAGACACATCTGGGCTTTGGCCTGAATTGCTACAGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCTGGGGGAGAAATTCCTaGGCATCCGGATATGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDPKHLSSPLTLTSCELPWGRNS*ASGYVC Trigger: ACAAACATATCCGGATGCCCAGGAATTTCTCCCCCA...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CCA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCCTGTTCATCTGGGCTTaGAGCTGTTCTAACTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EDPKHLSSPLTLTSCELPLFIWA*SCSNLK Trigger: CTTTAAGTTAGAACAGCTCCAAGCCCAGATGAACAG...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS GCA 90 bp | CTTGGACAGAGGGTCCCGAGGCTGGGTCGCTGCCGTTATAGTGCTTaGCAAGCTGCGCGCCCAGGCTGTCCAGCCAACCAATCTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGQRVPRLGRCRYSA*QAARPGCPANQSWA Trigger: AGCCCAAGATTGGTTGGCTGGACAGCCTGGGCGCGCAGCTTGGCAAGCACTATAACGGCAGCGACCCAGCCTCGGGACCCTCTGTCCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001965.14 ENSMUST00000145539.2 |
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| CDS CCA 90 bp | CGTGAACTGCGGGATCTGGCTGACAGTTCCATACTTGCCCCTGCCTaGACCAGGCCCCTGTCCGCTTGGCCTGCTGTGAGAGCCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RELRDLADSSILAPA*TRPLSAWPAVRALR Trigger: TCTGAGGGCTCTCACAGCAGGCCAAGCGGACAGGGGCCTGGTCCAGGCAGGGGCAAGTATGGAACTGTCAGCCAGATCCCGCAGTTCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | TTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCCAAGCAAGACTCTCCCGAGGCGCGTGCGTGGTCTaGAACTTGACGGCGAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LEAEGGSDHVRPQARLSRGACVV*NLTASA Trigger: CGCGCTCGCCGTCAAGTTCAAGACCACGCACGCGCC...TCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | CATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATCCGGATGGGCCTGTCGGGGTGTaGAGTGGAGACCCCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: HCRGHVRYPGGEIPGHPDGPVGV*SGDPHL Trigger: CAGATGGGGGTCTCCACTCAACACCCCGACAGGCCC...ATCCGGATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS TCA 90 bp | CACCACGGTGAGCGGGCTGCAGGTATAGCCGCAGGTACCACGCTGTaGGTCGTCCTGGTCGCTAAGCAGAAAGGCAGCAGAGTAGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: HHGERAAGIAAGTTL*VVLVAKQKGSRVGR Trigger: ACGCCCTACTCTGCTGCCTTTCTGCTTAGCGACCAGGACGACTCACAGCGTGGTACCTGCGGCTATACCTGCAGCCCGCTCACCGTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCCAAGCAAGACTCTCCCGAGAAGCCTTGGGGGTCTaGGTTGCCTGGGGCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LEAEGGSDHVRPQARLSREALGV*VAWGLS Trigger: CGACAGGCCCCAGGCAACCAAGACCCCCAAGGCTTC...TCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | CATAGCTTAGGGTCTGTGCAGAGGGCAGATGTCCCACCAGAAGCATCGACTCTGGGCGCGTGCGTGGTCTaGAACTTGACGGCGAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: HSLGSVQRADVPPEASTLGACVV*NLTASA Trigger: CGCGCTCGCCGTCAAGTTCAAGACCACGCACGCGCC...CAGAGTCGATGCTTCTGGTGGGACATCTGCCCTCTGCACAGACCCTAAGCTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTGGGCATGAAGCCTTGGGGGTCTaGGTTGCCTGGGGCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FVHCRGHVRYPGGEIPGHEALGV*VAWGLS Trigger: CGACAGGCCCCAGGCAACCAAGACCCCCAAGGCTTC...ATGCCCAGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGGGCTGAGGGCTGCAGCTCTTTCTTTTATGTCCACCACAGAGGAAACCTGCGTGGTCTTGAACTaGACGGCGAGCGCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AEGLRAAALSFMSTTEETCVVLN*TASARR Trigger: CCTGCGCGCGCTCGCCGTCAAGTTCAAGACCACGCA...GGTTTCCTCTGTGGTGGACATAAAAGAAAGAGCTGCAGCCCTCAGCCCCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | CATAGCTTAGGGTCTGTGCAGAGGGCAGATGTCCCACCAGAAGCATCGACTCTGTGCGTGGTCTTGAACTaGACGGCGAGCGCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLGSVQRADVPPEASTLCVVLN*TASARR Trigger: CCTGCGCGCGCTCGCCGTCAAGTTCAAGACCACGCA...CAGAGTCGATGCTTCTGGTGGGACATCTGCCCTCTGCACAGACCCTAAGCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAGGGAGGGAGGAAAAGTGGGGACCACCCAGTCCCTGTACTTCCAGGGGGTCCAAGTAAGTGTTTaGGGGAGCAACGTGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VFREGGKVGTTQSLYFQGVQVSV*GSNVAP Trigger: AGGGGCCACGTTGCTCCCCAAAACACTTACTTGGAC...CCCCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTTCCTCCCTCCCTGAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CAA 90 bp | GTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGCTGACAGTTCCATACTaGCCCCTGCCTGGACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKIWSTLALGLSFGGRGWLTVPY*PLPGPG Trigger: GCCTGGTCCAGGCAGGGGCAAGTATGGAACTGTCAG...CCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | GCTCTTGTTCTGAGGACGGCACCAGAGATTTGTCCATTGCCGCGGCCACGTGAGGGTGACATACTTGTCTaGGACAGAGGGTCCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALVLRTAPEICPLPRPREGDILV*DRGSRG Trigger: GCCTCGGGACCCTCTGTCCAAGACAAGTATGTCACC...CTCACGTGGCCGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTGGGCCTGTCGGGGTGTaGAGTGGAGACCCCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLGPVGV*SGDPHL Trigger: CAGATGGGGGTCTCCACTCAACACCCCGACAGGCCC...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS GCA 90 bp | GAGCGGTGCTTCTCCAGGTTGAACTCCACAAAGCTGAGCGTGAACTaGGGGATCTGGCTGACAGTTCCATACTTGCCCCTGCCTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: ERCFSRLNSTKLSVN*GIWLTVPYLPLPGP Trigger: TGGTCCAGGCAGGGGCAAGTATGGAACTGTCAGCCAGATCCCGCAGTTCACGCTCAGCTTTGTGGAGTTCAACCTGGAGAAGCACCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CCA 90 bp | TTCTCCAGGTTGAACTCCACAAAGCTGAGCGTGAACTGCGGGATCTaGCTGACAGTTCCATACTTGCCCCTGCCTGGACCAGGCCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSRLNSTKLSVNCGI*LTVPYLPLPGPGPC Trigger: ACAGGGGCCTGGTCCAGGCAGGGGCAAGTATGGAACTGTCAGCCAGATCCCGCAGTTCACGCTCAGCTTTGTGGAGTTCAACCTGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | TTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCCAAGCAAGACTCTCCCGACGGTGCTTCTCCAGGTaGAACTCCACAAAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEAEGGSDHVRPQARLSRRCFSR*NSTKLS Trigger: GCTCAGCTTTGTGGAGTTCAACCTGGAGAAGCACCG...TCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
||
| CDS-3UTR CAA 90 bp | TTGGAGGCAGAGGGTGGTTCTGATCATGTGCGGCCCCAAGCAAGACTCTCCCGACCTGATTGGCTGTCATaGAGGAAGAAGCCTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEAEGGSDHVRPQARLSRPDWLS*RKKPWG Trigger: CCCCCAAGGCTTCTTCCTCAATGACAGCCAATCAGG...TCGGGAGAGTCTTGCTTGGGGCCGCACATGATCAGAACCACCCTCTGCCTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS GCA 90 bp | TTGTGGGGAGCGATGATCTCAATCTCTGTGGTGGAGCCTGAGCGGTaGTTCTCCAGGTTGAACTCCACAAAGCTGAGCGTGAACTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LWGAMISISVVEPER*FSRLNSTKLSVNCG Trigger: CCCGCAGTTCACGCTCAGCTTTGTGGAGTTCAACCTGGAGAAGCACCGCTCAGGCTCCACCACAGAGATTGAGATCATCGCTCCCCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CCA 90 bp | TGCGTGACCTTTTCAGTGACATTCTGTGTCCGCTCCACCACCTTGTaGGGAGCGATGATCTCAATCTCTGTGGTGGAGCCTGAGCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVTFSVTFCVRSTTL*GAMISISVVEPERC Trigger: GCACCGCTCAGGCTCCACCACAGAGATTGAGATCATCGCTCCCCACAAGGTGGTGGAGCGGACACAGAATGTCACTGAAAAGGTCACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGGGTGACATACTTGTCTaGGACAGAGGGTCCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQGDILV*DRGSRG Trigger: GCCTCGGGACCCTCTGTCCAAGACAAGTATGTCACC...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | GTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTCTGCGTCCCGCAGGTaGAAGGTGACCTCTAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VKIWSTLALGLSFGGRGWSASRR*KVTSSL Trigger: TAAGCTAGAGGTCACCTTCAACCTGCGGGACGCAGA...CCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | CCTCTCTGCTCAGGCCATCCTGGTCACCTGGTTCAGCAGTCTGCAGTTTTTCAGGTGGGTTTGGGGGACTaGGGGGCATTTGCTGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLCSGHPGHLVQQSAVFQVGLGD*GAFAVA Trigger: TGCTACAGCAAATGCCCCCAAGTCCCCCAAACCCAC...CTGAAAAACTGCAGACTGCTGAACCAGGTGACCAGGATGGCCTGAGCAGAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS TCA 90 bp | CACCACCTTGTGGGGAGCGATGATCTCAATCTCTGTGGTGGAGCCTaGGCGGTGCTTCTCCAGGTTGAACTCCACAAAGCTGAGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HHLVGSDDLNLCGGA*AVLLQVELHKAERE Trigger: TTCACGCTCAGCTTTGTGGAGTTCAACCTGGAGAAGCACCGCTCAGGCTCCACCACAGAGATTGAGATCATCGCTCCCCACAAGGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | CATAGCTTAGGGTCTGTGCAGAGGGCAGATGTCCCACCAGAAGCATCGACTCTGCGGTGCTTCTCCAGGTaGAACTCCACAAAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSLGSVQRADVPPEASTLRCFSR*NSTKLS Trigger: GCTCAGCTTTGTGGAGTTCAACCTGGAGAAGCACCG...CAGAGTCGATGCTTCTGGTGGGACATCTGCCCTCTGCACAGACCCTAAGCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | CCCGAGGCCAGCAATCCAGCTTCTCTCGTGGGTTTGGGGGACTTGGGGGCATTTAAGACCTTCTCAGAGTaGGTGTTGGGTGACACATTG | + |
|
Preference number: 5 (lower is better) Translates to: PEASNPASLVGLGDLGAFKTFSE*VLGDTL Trigger: CAATGTGTCACCCAACACCAACTCTGAGAAGGTCTT...AAATGCCCCCAAGTCCCCCAAACCCACGAGAGAAGCTGGATTGCTGGCCTCGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | AAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGTTATTGAGGAAGAAGCCTaGGGGGTCTTGGTTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDLVNPGLGSELWRQRVVIEEEA*GVLVAW Trigger: CCAGGCAACCAAGACCCCCAAGGCTTCTTCCTCAAT...AACCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | CAGAGATTTGTCCATTGCCGCGGCCACGTGAGGTATCCTGGGGGAGAAATTCCTATTGAGGAAGAAGCCTaGGGGGTCTTGGTTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QRFVHCRGHVRYPGGEIPIEEEA*GVLVAW Trigger: CCAGGCAACCAAGACCCCCAAGGCTTCTTCCTCAAT...AGGAATTTCTCCCCCAGGATACCTCACGTGGCCGCGGCAATGGACAAATCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTGTCCAAGTAAGTGTTTaGGGGAGCAACGTGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLVQVSV*GSNVAP Trigger: AGGGGCCACGTTGCTCCCCAAAACACTTACTTGGAC...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | GAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTACATCCTGTGAGCTACCCGCTTCTCTCGTGGGTTaGGGGGACTTGGGGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: EDPKHLSSPLTLTSCELPASLVG*GDLGAF Trigger: AAATGCCCCCAAGTCCCCCAAACCCACGAGAGAAGC...GGGTAGCTCACAGGATGTAAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | GCTGAGGGGCTGAGGGCTGCAGCTCTTTCTTTTATGTCCACCACAGAGGAAACCTTCTCAGAGTTGGTGTaGGGTGACACATTGCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AEGLRAAALSFMSTTEETFSELV*GDTLPK Trigger: CTTCGGCAATGTGTCACCCAACACCAACTCTGAGAA...GGTTTCCTCTGTGGTGGACATAAAAGAAAGAGCTGCAGCCCTCAGCCCCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | GTAAAGATCTGGTCAACCCTGGCCTTGGGTCTGAGCTTTGGAGGCAGAGGGTGGAAGACCTTCTCAGAGTaGGTGTTGGGTGACACATTG | + |
|
Preference number: 5 (lower is better) Translates to: VKIWSTLALGLSFGGRGWKTFSE*VLGDTL Trigger: CAATGTGTCACCCAACACCAACTCTGAGAAGGTCTT...CCACCCTCTGCCTCCAAAGCTCAGACCCAAGGCCAGGGTTGACCAGATCTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | ATTTGCTGTAGCAATTCAGGCCAAAGCCCAGATGTGTCTGAAATGCTCAGGGAAACCGGGTCCCGCAGGTaGAAGGTGACCTCTAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ICCSNSGQSPDVSEMLRETGSRR*KVTSSL Trigger: TAAGCTAGAGGTCACCTTCAACCTGCGGGACCCGGT...TTCCCTGAGCATTTCAGACACATCTGGGCTTTGGCCTGAATTGCTACAGCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | CCCAAGCAAGACTCTCCCGAAGACCCGAAGCATCTCTCTTCTCCACTGACTCTTTTCTCCATCTGTGCATaGGCAATCAGGAACTTACGA | + |
|
Preference number: 5 (lower is better) Translates to: PKQDSPEDPKHLSSPLTLFSICA*AIRNLR Trigger: TCGTAAGTTCCTGATTGCCAATGCACAGATGGAGAA...AAGAGTCAGTGGAGAAGAGAGATGCTTCGGGTCTTCGGGAGAGTCTTGCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001965.14 |
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| CDS-3UTR CAA 90 bp | GTAGCAATTCAGGCCAAAGCCCAGATGTGTCTGAAATGCTCAGGGAAGGGGCAGTTCTCCATCTGTGCATaGGCAATCAGGAACTTACGA | + |
|
Preference number: 5 (lower is better) Translates to: VAIQAKAQMCLKCSGKGQFSICA*AIRNLR Trigger: TCGTAAGTTCCTGATTGCCAATGCACAGATGGAGAA...CTGCCCCTTCCCTGAGCATTTCAGACACATCTGGGCTTTGGCCTGAATTGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS-3UTR CAA 90 bp | ATTTGCTGTAGCAATTCAGGCCAAAGCCCAGATGTGTCTGAAATGCTCAGGGAATTCTCAGAGTTGGTGTaGGGTGACACATTGCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ICCSNSGQSPDVSEMLREFSELV*GDTLPK Trigger: CTTCGGCAATGTGTCACCCAACACCAACTCTGAGAA...TTCCCTGAGCATTTCAGACACATCTGGGCTTTGGCCTGAATTGCTACAGCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
||
| CDS CAA 90 bp | TCGCCCAGGTGCACCAGCGTGTCCCCAGGCGGCGCGTGCGTGGTCTaGAACTTGACGGCGAGCGCGCGCAGGCACCCCTTGCTGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPRCTSVSPGGACVV*NLTASARRHPLLAP Trigger: CGGCGCCAGCAAGGGGTGCCTGCGCGCGCTCGCCGTCAAGTTCAAGACCACGCACGCGCCGCCTGGGGACACGCTGGTGCACCTGGGCGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
||
| CDS CAA 72 bp | TGCACCAGCGTGTCCCCAGGCGGCGCGTGCGTGGTCTaGAACTTGACGGCGAGCGCGCGCAGGCACCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CTSVSPGGACVV*NLTASARRHPL Trigger: CAAGGGGTGCCTGCGCGCGCTCGCCGTCAAGTTCAAGACCACGCACGCGCCGCCTGGGGACACGCTGGTGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
||
| CDS CAA 72 bp | CATACTTGCCCCTGCCTGGACCAGGCCCCTGTCCGCTaGGCCTGCTGTGAGAGCCCTCAGAGCCCAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HTCPCLDQAPVR*ACCESPQSPGS Trigger: GCTTCCTGGGCTCTGAGGGCTCTCACAGCAGGCCAAGCGGACAGGGGCCTGGTCCAGGCAGGGGCAAGTATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
||
| CDS GCA 72 bp | AGGGTCCCGAGGCTGGGTCGCTGCCGTTATAGTGCTTaGCAAGCTGCGCGCCCAGGCTGTCCAGCCAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: RVPRLGRCRYSA*QAARPGCPANQ Trigger: TTGGTTGGCTGGACAGCCTGGGCGCGCAGCTTGGCAAGCACTATAACGGCAGCGACCCAGCCTCGGGACCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001965.14 ENSMUST00000145539.2 |
||
| CDS GCA 72 bp | ACTTGTCTTGGACAGAGGGTCCCGAGGCTGGGTCGCTaGCGTTATAGTGCTTGCCAAGCTGCGCGCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TCLGQRVPRLGR*RYSACQAARPG Trigger: GCCTGGGCGCGCAGCTTGGCAAGCACTATAACGGCAGCGACCCAGCCTCGGGACCCTCTGTCCAAGACAAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001965.14 ENSMUST00000145539.2 |
||
| CDS CCA 72 bp | CGGGATCTGGCTGACAGTTCCATACTTGCCCCTGCCTaGACCAGGCCCCTGTCCGCTTGGCCTGCTGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RDLADSSILAPA*TRPLSAWPAVR Trigger: TCTCACAGCAGGCCAAGCGGACAGGGGCCTGGTCCAGGCAGGGGCAAGTATGGAACTGTCAGCCAGATCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
||
| CDS GCA 72 bp | CCAGGAAGCTGTGTGACAACAAACGTTGGGTCAGGCTaGGGCTGCTGCTCTTGGCCAGGAGCTGGGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGSCVTTNVGSG*GCCSWPGAGPG Trigger: ACCTGGCCCAGCTCCTGGCCAAGAGCAGCAGCCGCAGCCTGACCCAACGTTTGTTGTCACACAGCTTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
||
| CDS CCA 72 bp | CCCTCAGAGCCCAGGAAGCTGTGTGACAACAAACGTTaGGTCAGGCTGCGGCTGCTGCTCTTGGCCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSEPRKLCDNKR*VRLRLLLLARS Trigger: GCTCCTGGCCAAGAGCAGCAGCCGCAGCCTGACCCAACGTTTGTTGTCACACAGCTTCCTGGGCTCTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
||
| CDS CCA 72 bp | CAAGCTGCGCGCCCAGGCTGTCCAGCCAACCAATCTTaGGCTCCAAGTAGGGTCGCTCCACATTGCCGATGG | + |
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Preference number: 6 (lower is better) Translates to: QAARPGCPANQS*APSRVAPHCRW Trigger: CCATCGGCAATGTGGAGCGACCCTACTTGGAGCCCAAGATTGGTTGGCTGGACAGCCTGGGCGCGCAGCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001965.14 ENSMUST00000145539.2 |
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| CDS CAA 72 bp | GCAGGTCGCAGTAGGTCAGGGCACGCACATCGGCGCTaGATTTGCCTGGTCTGGCATGGAGACTGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGRSRSGHAHRR*ICLVWHGDWQA Trigger: AGCCTGCCAGTCTCCATGCCAGACCAGGCAAATCAAGCGCCGATGTGCGTGCCCTGACCTACTGCGACCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS TCA 72 bp | GAGCGGGCTGCAGGTATAGCCGCAGGTACCACGCTGTaGGTCGTCCTGGTCGCTAAGCAGAAAGGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ERAAGIAAGTTL*VVLVAKQKGSR Trigger: TCTGCTGCCTTTCTGCTTAGCGACCAGGACGACTCACAGCGTGGTACCTGCGGCTATACCTGCAGCCCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CAA 90 bp | GTCCCCAAGGTCCCCTCTGTGACCCTTGTCACCGGGTCCCGCAGGTaGAAGGTGACCTCTAGCTTATTCCAGAAGGTATCTGCAAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: VPKVPSVTLVTGSRR*KVTSSLFQKVSAKA Trigger: CGCCTTTGCAGATACCTTCTGGAATAAGCTAGAGGTCACCTTCAACCTGCGGGACCCGGTGACAAGGGTCACAGAGGGGACCTTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS CAA 90 bp | AAGCTGTGTGACAACAAACGTTGGGTCAGGCTGCGGCTGCTGCTCTaGGCCAGGAGCTGGGCCAGGTCCTCGAAATTGAGGATGAACATG | + |
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Preference number: 6 (lower is better) Translates to: KLCDNKRWVRLRLLL*ARSWARSSKLRMNM Trigger: CATGTTCATCCTCAATTTCGAGGACCTGGCCCAGCTCCTGGCCAAGAGCAGCAGCCGCAGCCTGACCCAACGTTTGTTGTCACACAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CAA 90 bp | ACCTGCGTGACCTTTTCAGTGACATTCTGTGTCCGCTCCACCACCTaGTGGGGAGCGATGATCTCAATCTCTGTGGTGGAGCCTGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: TCVTFSVTFCVRSTT*WGAMISISVVEPER Trigger: CCGCTCAGGCTCCACCACAGAGATTGAGATCATCGCTCCCCACAAGGTGGTGGAGCGGACACAGAATGTCACTGAAAAGGTCACGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CAA 72 bp | ATCTCTGTGGTGGAGCCTGAGCGGTGCTTCTCCAGGTaGAACTCCACAAAGCTGAGCGTGAACTGCGGGATC | + |
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Preference number: 6 (lower is better) Translates to: ISVVEPERCFSR*NSTKLSVNCGI Trigger: GATCCCGCAGTTCACGCTCAGCTTTGTGGAGTTCAACCTGGAGAAGCACCGCTCAGGCTCCACCACAGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS TCA 72 bp | GTGGGGAGCGATGATCTCAATCTCTGTGGTGGAGCCTaGGCGGTGCTTCTCCAGGTTGAACTCCACAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: VGSDDLNLCGGA*AVLLQVELHKA Trigger: AGCTTTGTGGAGTTCAACCTGGAGAAGCACCGCTCAGGCTCCACCACAGAGATTGAGATCATCGCTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS GCA 72 bp | GCGATGATCTCAATCTCTGTGGTGGAGCCTGAGCGGTaGTTCTCCAGGTTGAACTCCACAAAGCTGAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: AMISISVVEPER*FSRLNSTKLSV Trigger: CACGCTCAGCTTTGTGGAGTTCAACCTGGAGAAGCACCGCTCAGGCTCCACCACAGAGATTGAGATCATCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CCA 72 bp | TTGAACTCCACAAAGCTGAGCGTGAACTGCGGGATCTaGCTGACAGTTCCATACTTGCCCCTGCCTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: LNSTKLSVNCGI*LTVPYLPLPGP Trigger: TGGTCCAGGCAGGGGCAAGTATGGAACTGTCAGCCAGATCCCGCAGTTCACGCTCAGCTTTGTGGAGTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CCA 72 bp | GTGTCTGAAATGCTCAGGGAAGGGGCAGCACCTGATTaGCTGTCATTGAGGAAGAAGCCTTGGGGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VSEMLREGAAPD*LSLRKKPWGSW Trigger: CCAAGACCCCCAAGGCTTCTTCCTCAATGACAGCCAATCAGGTGCTGCCCCTTCCCTGAGCATTTCAGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 |
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| CDS CAA 72 bp | GTCCCCTCTGTGACCCTTGTCACCGGGTCCCGCAGGTaGAAGGTGACCTCTAGCTTATTCCAGAAGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: VPSVTLVTGSRR*KVTSSLFQKVS Trigger: AGATACCTTCTGGAATAAGCTAGAGGTCACCTTCAACCTGCGGGACCCGGTGACAAGGGTCACAGAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145539.2 |
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| CDS CAA 90 bp | ATGATCTCAATCTCTGTGGTGGAGCCTGAGCGGTGCTTCTCCAGGTaGAACTCCACAAAGCTGAGCGTGAACTGCGGGATCTGGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: MISISVVEPERCFSR*NSTKLSVNCGIWLT Trigger: TGTCAGCCAGATCCCGCAGTTCACGCTCAGCTTTGTGGAGTTCAACCTGGAGAAGCACCGCTCAGGCTCCACCACAGAGATTGAGATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS GCA 72 bp | TTCTCCAGGTTGAACTCCACAAAGCTGAGCGTGAACTaGGGGATCTGGCTGACAGTTCCATACTTGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FSRLNSTKLSVN*GIWLTVPYLPL Trigger: CAGGGGCAAGTATGGAACTGTCAGCCAGATCCCGCAGTTCACGCTCAGCTTTGTGGAGTTCAACCTGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CAA 72 bp | GGTGTTGAGTGGAGACCCCCATCTGCGTCCCGCAGGTaGAAGGTGACCTCTAGCTTATTCCAGAAGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: GVEWRPPSASRR*KVTSSLFQKVS Trigger: AGATACCTTCTGGAATAAGCTAGAGGTCACCTTCAACCTGCGGGACGCAGATGGGGGTCTCCACTCAACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 |
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| CDS CCA 72 bp | TTTTCAGTGACATTCTGTGTCCGCTCCACCACCTTGTaGGGAGCGATGATCTCAATCTCTGTGGTGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: FSVTFCVRSTTL*GAMISISVVEP Trigger: AGGCTCCACCACAGAGATTGAGATCATCGCTCCCCACAAGGTGGTGGAGCGGACACAGAATGTCACTGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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| CDS CAA 72 bp | ACCTTTTCAGTGACATTCTGTGTCCGCTCCACCACCTaGTGGGGAGCGATGATCTCAATCTCTGTGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: TFSVTFCVRSTT*WGAMISISVVE Trigger: CTCCACCACAGAGATTGAGATCATCGCTCCCCACAAGGTGGTGGAGCGGACACAGAATGTCACTGAAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001965.14 ENSMUST00000106903.8 ENSMUST00000145539.2 |
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