Pregenerated sensors for KCNH5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034402Ensembl transcript IDs: ENSMUST00000042299.4
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGCTTCGGGTCAGAAATaGCCTCTCCACCCGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHASGQK*PLHPAP Trigger: TGGGGCCGGGTGGAGAGGTCATTTCTGACCCGAAGC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGGCGGCTCTCTACCTaGAGCTGGCTCCTCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGRLST*SWLLSG Trigger: TCCTGAGAGGAGCCAGCTTCAGGTAGAGAGCCGCCC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGTCACCTCATTCTTCTaGCGCAGCCGCTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHVTSFF*RSRSSS Trigger: GGAGGAGGAGCGGCTGCGGCAGAAGAATGAGGTGAC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCCCCCATGTTGTTCTTaGGTCTCAGCCACCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHPPCCS*VSATPS Trigger: GGAAGGGGTGGCTGAGACTCAAGAACAACATGGGGG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGTCACACTGTTCTCTaGGTCACTGCCCTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGHTVL*VTALGV Trigger: GACCCCAAGGGCAGTGACTCAGAGAACAGTGTGACC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATATGGAGGCTCCGTTCTaGAAAGGGCGGCTCTCTACC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHMEAPF*KGRLST Trigger: GGTAGAGAGCCGCCCTTTGCAGAACGGAGCCTCCAT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATACAGGGAGTCCTTGCTaGGTCCTCCTTCCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHTGSPC*VLLPRS Trigger: GGATCTGGGAAGGAGGACCCAGCAAGGACTCCCTGT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGAAGAGCTTCCTCACTaGGTGGTCCACGGGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHEELPH*VVHGDA Trigger: AGCATCCCCGTGGACCACCCAGTGAGGAAGCTCTTC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATATGCAAGCCAGCCAGTaGGCCACCAGTCCAAACACA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHMQASQ*ATSPNT Trigger: TGTGTTTGGACTGGTGGCTCACTGGCTGGCTTGCAT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGTAGAAAGAATGCTTaGCATCAGCCTGGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGRKNA*HQPGWG Trigger: GCCCCAGCCAGGCTGATGTCAAGCATTCTTTCTACC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCATACAGGGAGTCCTTaGTGGGTCCTCCTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHHTGSP*WVLLPR Trigger: TCTGGGAAGGAGGACCCAGCAAGGACTCCCTGTATG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGTTTGGAACTCCACTaGCAAGGCACGCAGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGLELH*QGTQTS Trigger: GGATGTCTGCGTGCCTTGGCAGTGGAGTTCCAAACC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGTGGTCCACGGGGATaGTCAGAGTCACCTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGGPRG*SESPHS Trigger: AGAATGAGGTGACTCTGAGCATCCCCGTGGACCACC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTGTTCTCTGAGTCACTaGCCTTGGGGTCCTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHCSLSH*PWGPPT Trigger: TGTCGGAGGACCCCAAGGGCAGTGACTCAGAGAACA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCTGAGGAAGGATGTCTaGTCCCAGCTGAAGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHLRKDV*SQLKHF Trigger: GAAGTGCTTCAGCTGGGATCAGACATCCTTCCTCAG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCCCCAGGAGCACAGTaGATGGTTTGGAACTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSPGAQ*MVWNST Trigger: AGTGGAGTTCCAAACCATTCACTGTGCTCCTGGGGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCCAAAAATGTGTTCTaGGGAGCCACCAGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSKNVF*GATSPL Trigger: GAGAGGGCTGGTGGCTCCGCAGAACACATTTTTGGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTGGGCTTCAGTTCCATaGCATCGCGGTTGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHWASVP*HRGCSA Trigger: AGCAGAACAACCGCGATGCCATGGAACTGAAGCCCA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGTTCAGCGCCACCATTaGGCTTCAGTTCCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHVQRHH*ASVPWH Trigger: ATGCCATGGAACTGAAGCCCAATGGTGGCGCTGAAC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTGCTTGACATCAGCCTaGCTGGGGCTGTGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHCLTSA*LGLCSR Trigger: TCTAGAACACAGCCCCAGCCAGGCTGATGTCAAGCA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATACCTTCCGGTTCAGATaGACACAGATGTCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHTFRFR*TQMSAL Trigger: GAGAGCTGACATCTGTGTTCATCTGAACCGGAAGGT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCCAGGGCAGTCATTCTaGAGCTTAGCAGCTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHPGQSF*SLAAGY Trigger: ATATCCAGCTGCTAAGCTGCAGAATGACTGCCCTGG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCGTATTGTAGCGATATaGGGTCCCAATGCTCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHRIVAI*GPNAQG Trigger: GCCTTGAGCATTGGGACCCCATATCGCTACAATACG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTGTCCTTGGGACAGATaGAGAGGACCTTCTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHCPWDR*RGPSLC Trigger: ACACAGAGAAGGTCCTCTCCATCTGTCCCAAGGACA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCAGGAGCACAGTGAATaGTTTGGAACTCCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHQEHSE*FGTPLP Trigger: TGGCAGTGGAGTTCCAAACCATTCACTGTGCTCCTG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCACCTTTCCCTAAAATaGCCACCACCTCCTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHHLSLK*PPPPHP Trigger: AGGATGAGGAGGTGGTGGCCATTTTAGGGAAAGGTG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTACGCCAGAGACGTCTaGATGGGGGTAATCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHYARDV*MGVICD Trigger: ATCACAGATTACCCCCATCCAGACGTCTCTGGCGTA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATATTCACTGGAGCGCCTaGCGATGTTCTCCAAAAATG | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHIHWSA*RCSPKM Trigger: CATTTTTGGAGAACATCGTCAGGCGCTCCAGTGAAT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTGCTGCTTTTCTGCATaGCGTCAGCTCGATGATATC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHCCFSA*RQLDDI Trigger: GATATCATCGAGCTGACGTCATGCAGAAAAGCAGCA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCGACTCGGCTTTGGTaGCATTATTCCAGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSTRLW*HYSSLP Trigger: AGGAAGACTGGAATAATGTCACCAAAGCCGAGTCGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCCTCATAGTCTCCAATaGTGTACCAGATGCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHPHSLQ*CTRCKP Trigger: TGGCTTGCATCTGGTACAGCATTGGAGACTATGAGG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCCTTCCCAGATCCCTaGACTCGTATTGTAGCGATA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSFPDP*TRIVAI Trigger: TATCGCTACAATACGAGTGCAGGGATCTGGGAAGGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAGCCGACCATCATCATaGCCACTGAGAACATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSRPSS*PLRTSS Trigger: AGAAGATGTTCTCAGTGGCCATGATGATGGTCGGCT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATACGCATGAGCAAGGGTaGTTTCCTTCCAGAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHTHEQG*FPSRRC Trigger: ACATCTTCTGGAAGGAAACCACCCTTGCTCATGCGT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTGCTGTTTGAACTTCTaGAAGAGCTTCCTCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHCCLNF*KSFLTG Trigger: CCCAGTGAGGAAGCTCTTCCAGAAGTTCAAACAGCA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGGAGGTACTTGGAGTaGAATTTGGGGTTTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGRYLE*NLGFWR Trigger: TCTCCAAAACCCCAAATTCCACTCCAAGTACCTCCC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAGCCAGCTGTCTATTTaGATGGTGTTGGTGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSQLSI*MVLVTS Trigger: TGAAGTCACCAACACCATTCAAATAGACAGCTGGCT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGTTCTTTCTGCTGTTTaGACTTCTGGAAGAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHVLSAV*TSGRAS Trigger: GGAAGCTCTTCCAGAAGTTCAAACAGCAGAAAGAAC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCCTTCTCTGTGTCGATaGCTTTTGACATTGACCATG | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHPSLCR*LLTLTM Trigger: CATGGTCAATGTCAAAAGGCATCGACACAGAGAAGG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCATGTTTGACTTCCTaGAGTGTGGTTTGTAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSCLTS*SVVCKA Trigger: GGCCTTACAAACCACACTGCAGGAAGTCAAACATGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAAAATCTCTGCCACCTaGTTTTCCAGGGCAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHKISAT*FSRAVI Trigger: AATGACTGCCCTGGAAAAGCAGGTGGCAGAGATTTT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGCCAGTCCACAATTTaGGCATTTCCCAGTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGQSTI*AFPSKK Trigger: TTTCTTACTGGGAAATGCCCAAATTGTGGACTGGCC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCCTTAAGGGGTTCTTaGTCACACTGTTCTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSLRGS*SHCSLS Trigger: ACTCAGAGAACAGTGTGACCAAGAACCCCTTAAGGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATATGACGTCAGCTCGATaGTATCCAGAGAGTTTACAA | + |
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Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHMTSAR*YPESLQ Trigger: TTGTAAACTCTCTGGATATCATCGAGCTGACGTCAT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTGTCAAAAGTCTGCCTaGCTTTCTCAATGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHCQKSA*LSQWSS Trigger: AGAAGACCATTGAGAAAGTCAGGCAGACTTTTGACA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCACAATAGTGTAAGATaGTATGTGGTGGCGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHHNSVR*YVVASL Trigger: CAAAGACGCCACCACATATCATCTTACACTATTGTG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCAGCTAGTCTTGAATaGTTGTGGACTGTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSASLE*LWTVSV Trigger: AACAGAGACAGTCCACAAGCATTCAAGACTAGCTGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGCTGGCCAATCGGAATaGAGGATGTTCATTAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHAGQSE*RMFIKN Trigger: GTTTTTAATGAACATCCTGCATTCCGATTGGCCAGC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGTAACGGTTGGTGTTaGCATACATTTGCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGNGWC*HTFAGK Trigger: TTTTCCAGCAAATGTATGCCAACACCAACCGTTACC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATACTTGGAGTGGAATTTaGGGTTTTGGAGAAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHTWSGI*GFGEDV Trigger: GACATCTTCTCCAAAACCCCAAATTCCACTCCAAGT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAGGCCTTTTGGGACCTaGTATAATTTCAGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHRPFGT*YNFRKS Trigger: AGATTTCCTGAAATTATATCAGGTCCCAAAAGGCCT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGAGGTTCCTGGAAAATaGGTTTGCAAATGCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHEVPGK*VCKCCI Trigger: TATACAGCATTTGCAAACTCATTTTCCAGGAACCTC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR TCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATACACTAAAAATATCCTaGCATGGTATTTGGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHTLKIS*HGIWGG Trigger: ACCTCCCCAAATACCATGTCAGGATATTTTTAGTGT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR GCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTTCATTGGTGTAAGCTaGTGTAAAACACTTCGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHFIGVS*CKTLRL Trigger: TAGCCGAAGTGTTTTACAGCAGCTTACACCAATGAA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAGTCTTGAATGCTTGTaGACTGTCTCTGTTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSLECL*TVSVLF Trigger: GAATAAAACAGAGACAGTCCACAAGCATTCAAGACT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CCA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAAAAATATCCTGACATaGTATTTGGGGAGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWQARIQLDMQYVHIKIHKNILT*YLGRYL Trigger: CAAGTACCTCCCCAAATACCATGTCAGGATATTTTT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS GCA 90 bp | GTAAATCAGGTCCCCAGGAGCACAGTGAATGGTTTGGAACTCCACTaGCAAGGCACGCAGACATCCATCGCTGGCCAATCGGAATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VNQVPRSTVNGLELH*QGTQTSIAGQSECR Trigger: CCTGCATTCCGATTGGCCAGCGATGGATGTCTGCGTGCCTTGGCAGTGGAGTTCCAAACCATTCACTGTGCTCCTGGGGACCTGATTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 90 bp | GCTGGGTCCTCCTTCCCAGATCCCTGCACTCGTATTGTAGCGATATaGGGTCCCAATGCTCAAGGCCAACTGGTAGAGCCAGCTGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: AGSSFPDPCTRIVAI*GPNAQGQLVEPAVY Trigger: ATAGACAGCTGGCTCTACCAGTTGGCCTTGAGCATTGGGACCCCATATCGCTACAATACGAGTGCAGGGATCTGGGAAGGAGGACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS CCA 90 bp | CACTCTCTCCAGCATGGTAAATCAGGTCCCCAGGAGCACAGTGAATaGTTTGGAACTCCACTGCCAAGGCACGCAGACATCCATCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLQHGKSGPQEHSE*FGTPLPRHADIHRW Trigger: CCAGCGATGGATGTCTGCGTGCCTTGGCAGTGGAGTTCCAAACCATTCACTGTGCTCCTGGGGACCTGATTTACCATGCTGGAGAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS TCA 90 bp | GCTGGTTTTCACATACGCCAGAGACGTCTGGATGGGGGTAATCTGTaGTACGGTGACCACACTGGTACCTGTGATGGAGGCTCCGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGFHIRQRRLDGGNL*YGDHTGTCDGGSVL Trigger: CAGAACGGAGCCTCCATCACAGGTACCAGTGTGGTCACCGTATCACAGATTACCCCCATCCAGACGTCTCTGGCGTATGTGAAAACCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 90 bp | AGGGCGGCTCTCTACCTGAAGCTGGCTCCTCTCAGGATCACTCTGTaGAGAGCCCTGGATCCTCAGTTCTTTCTGCTGTTTGAACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAALYLKLAPLRITL*RALDPQFFLLFELL Trigger: CAGAAGTTCAAACAGCAGAAAGAACTGAGGATCCAGGGCTCTGCACAGAGTGATCCTGAGAGGAGCCAGCTTCAGGTAGAGAGCCGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS GCA 90 bp | TCAGCGCCACCATTGGGCTTCAGTTCCATGGCATCGCGGTTGTTCTaGTTAAGAGACTCGCTGGTTTTCACATACGCCAGAGACGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAPPLGFSSMASRLF*LRDSLVFTYARDVW Trigger: CCAGACGTCTCTGGCGTATGTGAAAACCAGCGAGTCTCTTAAGCAGAACAACCGCGATGCCATGGAACTGAAGCCCAATGGTGGCGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 90 bp | CTCTCAGGATCACTCTGTGCAGAGCCCTGGATCCTCAGTTCTTTCTaGTGTTTGAACTTCTGGAAGAGCTTCCTCACTGGGTGGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LSGSLCAEPWILSSF*CLNFWKSFLTGWST Trigger: CGTGGACCACCCAGTGAGGAAGCTCTTCCAGAAGTTCAAACAGCAGAAAGAACTGAGGATCCAGGGCTCTGCACAGAGTGATCCTGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 90 bp | CTTCCCAGATCCCTGCACTCGTATTGTAGCGATATGGGGTCCCAATaGTCAAGGCCAACTGGTAGAGCCAGCTGTCTATTTGAATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRSLHSYCSDMGSQ*SRPTGRASCLFEWC Trigger: ACACCATTCAAATAGACAGCTGGCTCTACCAGTTGGCCTTGAGCATTGGGACCCCATATCGCTACAATACGAGTGCAGGGATCTGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 90 bp | TTCTGCTTAAGAGACTCGCTGGTTTTCACATACGCCAGAGACGTCTaGATGGGGGTAATCTGTGATACGGTGACCACACTGGTACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FCLRDSLVFTYARDV*MGVICDTVTTLVPV Trigger: CACAGGTACCAGTGTGGTCACCGTATCACAGATTACCCCCATCCAGACGTCTCTGGCGTATGTGAAAACCAGCGAGTCTCTTAAGCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 90 bp | CTCCACTGCCAAGGCACGCAGACATCCATCGCTGGCCAATCGGAATaGAGGATGTTCATTAAAAACCTTCCGGTTCAGATGAACACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHCQGTQTSIAGQSE*RMFIKNLPVQMNTD Trigger: ATCTGTGTTCATCTGAACCGGAAGGTTTTTAATGAACATCCTGCATTCCGATTGGCCAGCGATGGATGTCTGCGTGCCTTGGCAGTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 90 bp | TCTGCCACCTGCTTTTCCAGGGCAGTCATTCTGCAGCTTAGCAGCTaGATATCCTCCTTGAGTTCATGTTTGACTTCCTGCAGTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SATCFSRAVILQLSS*ISSLSSCLTSCSVV Trigger: AACCACACTGCAGGAAGTCAAACATGAACTCAAGGAGGATATCCAGCTGCTAAGCTGCAGAATGACTGCCCTGGAAAAGCAGGTGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATACATACAGGGAGTCCTaGCTGGGTCCTCCTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHTYRES*LGPPSQ Trigger: CTGGGAAGGAGGACCCAGCAAGGACTCCCTGTATGT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGGTTCAGCGCCACCATaGGGCTTCAGTTCCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHGSAPP*GFSSMA Trigger: TGCCATGGAACTGAAGCCCAATGGTGGCGCTGAACC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGCCCCCATGTTGTTCTaGAGTCTCAGCCACCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHAPMLF*SLSHPF Trigger: GAAGGGGTGGCTGAGACTCAAGAACAACATGGGGGC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCAGCTCTCATGTCCTaGGGACAGATGGAGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSALMS*GQMERT Trigger: GGTCCTCTCCATCTGTCCCAAGGACATGAGAGCTGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAGCACAGTGAATGGTTaGGAACTCCACTGCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSTVNG*ELHCQG Trigger: GCCTTGGCAGTGGAGTTCCAAACCATTCACTGTGCT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCCATGGCATCGCGGTaGTTCTGCTTAAGAGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSMASR*FCLRDS Trigger: CGAGTCTCTTAAGCAGAACAACCGCGATGCCATGGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATATGGGGCTGTTGACCTaGAGACATTTGGGTTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHMGLLT*RHLGSA Trigger: CGCTGAACCCAAATGTCTCAAGGTCAACAGCCCCAT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAGCAAGGCTTCTCGCTaGATGATGTGCAGATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSKASR*MMCRSQ Trigger: CTGTGATCTGCACATCATCAAGCGAGAAGCCTTGCT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTTGACCTTGAGACATTaGGGTTCAGCGCCACCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHLTLRH*GSAPPL Trigger: CAATGGTGGCGCTGAACCCAAATGTCTCAAGGTCAA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATATCCTGATGGGGCTGTaGACCTTGAGACATTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHILMGL*TLRHLG Trigger: ACCCAAATGTCTCAAGGTCAACAGCCCCATCAGGAT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCCCATCGACTCGGCTTaGGTGACATTATTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHPIDSA*VTLFQS Trigger: AGACTGGAATAATGTCACCAAAGCCGAGTCGATGGG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATATCCTGACATGGTATTaGGGGAGGTACTTGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHILTWY*GRYLEW Trigger: CCACTCCAAGTACCTCCCCAAATACCATGTCAGGAT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGCACTTCAGCTAGTCTaGAATGCTTGTGGACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHALQLV*NACGLS Trigger: AGACAGTCCACAAGCATTCAAGACTAGCTGAAGTGC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCGTCTTTGGCGCTTCTaGTTTGTACTGAGGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHRLWRF*FVLRKD Trigger: ATCCTTCCTCAGTACAAACAAGAAGCGCCAAAGACG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTATGTGGTGGCGTCTTaGGCGCTTCTTGTTTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHYVVAS*ALLVCT Trigger: AGTACAAACAAGAAGCGCCAAAGACGCCACCACATA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGAGCCAGCTGTCTATTaGAATGGTGTTGGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHEPAVY*NGVGDF Trigger: GAAGTCACCAACACCATTCAAATAGACAGCTGGCTC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATATCCGCTTCCTTAGATaGCAAGTGAGAGTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHIRFLR*QVRVRF Trigger: GAACCTCACTCTCACTTGCAATCTAAGGAAGCGGAT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTTCCTTAAGGGGTTCTaGGTCACACTGTTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHFLKGF*VTLFSE Trigger: CTCAGAGAACAGTGTGACCAAGAACCCCTTAAGGAA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGTGGAATTTGGGGTTTaGGAGAAGATGTCTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHVEFGV*EKMSGV Trigger: TACCCCAGACATCTTCTCCAAAACCCCAAATTCCAC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS TCA 90 bp | AAAAATAGTTGCATAAAGAAGAGAGCCGACCATCATCATGGCCACTaGGAACATCTTCTCCACGTCTGTGGTCGGAGCTATGTTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KNSCIKKRADHHHGH*EHLLHVCGRSYVSK Trigger: TTTGGAAACATAGCTCCGACCACAGACGTGGAGAAGATGTTCTCAGTGGCCATGATGATGGTCGGCTCTCTTCTTTATGCAACTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAAACACTTCGGCTATTaGTCAAAGCCCGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHKHFGY*SKPVSI Trigger: GATTGACACGGGCTTTGACAAATAGCCGAAGTGTTT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCTGTGTCGATGCCTTTaGACATTGACCATGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHLCRCL*TLTMLR Trigger: TCTCAACATGGTCAATGTCAAAAGGCATCGACACAG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAGCTGGATATCCTCCTaGAGTTCATGTTTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSWISS*SSCLTS Trigger: GGAAGTCAAACATGAACTCAAGGAGGATATCCAGCT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTATTTGGGGAGGTACTaGGAGTGGAATTTGGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHYLGRY*EWNLGF Trigger: AAACCCCAAATTCCACTCCAAGTACCTCCCCAAATA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCCTCTATAGGCTGTTaGAACAGTGTAATGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSSIGC*NSVMSL Trigger: CAAGGACATTACACTGTTCAAACAGCCTATAGAGGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGCTAGTCTTGAATGCTaGTGGACTGTCTCTGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHASLEC*WTVSVL Trigger: TAAAACAGAGACAGTCCACAAGCATTCAAGACTAGC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTACTTGGAGTGGAATTaGGGGTTTTGGAGAAGATGT | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHYLEWN*GFWRRC Trigger: ACATCTTCTCCAAAACCCCAAATTCCACTCCAAGTA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAAGTTGATTTCGTCTTaGTCAGATTCGGGTGACTCA | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHKLISS*SDSGDS Trigger: TGAGTCACCCGAATCTGACAAAGACGAAATCAACTT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCTTATTGGTGCGATTaGCATGTAAAACCAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSYWCD*HVKPNR Trigger: CCTGTTTGGTTTTACATGCAAATCGCACCAATAAGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATAACAGTGTAATGTCCTaGAATGTACACAGGAACAAG | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHNSVMS*NVHRNK Trigger: CTTGTTCCTGTGTACATTCAAGGACATTACACTGTT...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCGATGCCTTTTGACATaGACCATGTTGAGACAATAT | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHRCLLT*TMLRQY Trigger: ATATTGTCTCAACATGGTCAATGTCAAAAGGCATCG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATGAACTTCAAAACAGTTaGACTCGTAGTTGTCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHELQNS*TRSCQK Trigger: CTTTTGACAACTACGAGTCAAACTGTTTTGAAGTTC...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATCGTGTTCATTTCTTATaGGTGCGATTTGCATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHRVHFL*VRFACK Trigger: TTTACATGCAAATCGCACCAATAAGAAATGAACACG...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGCAGGCCAGAATCCAGCTGGACATGCAGTATGTACATATCAAAATCCATTCCTGGAAAATGAGTTaGCAAATGCTGTATAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LWQARIQLDMQYVHIKIHSWKMS*QMLYRS Trigger: ACTTCTATACAGCATTTGCAAACTCATTTTCCAGGA...ATGGATTTTGATATGTACATACTGCATGTCCAGCTGGATTCTGGCCTGCCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 72 bp | TCTGGAAGAGCTTCCTCACTGGGTGGTCCACGGGGATaGTCAGAGTCACCTCATTCTTCTGCCGCAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SGRASSLGGPRG*SESPHSSAAAA Trigger: AGCGGCTGCGGCAGAAGAATGAGGTGACTCTGAGCATCCCCGTGGACCACCCAGTGAGGAAGCTCTTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 72 bp | GGGTTCTTGGTCACACTGTTCTCTGAGTCACTGCCCTaGGGGTCCTCCGACAAGAGCCCCATCGACTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: GFLVTLFSESLP*GSSDKSPIDSA Trigger: AGCCGAGTCGATGGGGCTCTTGTCGGAGGACCCCAAGGGCAGTGACTCAGAGAACAGTGTGACCAAGAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 72 bp | GTCCCCAGGAGCACAGTGAATGGTTTGGAACTCCACTaGCAAGGCACGCAGACATCCATCGCTGGCCAATCG | + |
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Preference number: 6 (lower is better) Translates to: VPRSTVNGLELH*QGTQTSIAGQS Trigger: CGATTGGCCAGCGATGGATGTCTGCGTGCCTTGGCAGTGGAGTTCCAAACCATTCACTGTGCTCCTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 72 bp | GGTTCTTGGTCACACTGTTCTCTGAGTCACTGCCCTTaGGGTCCTCCGACAAGAGCCCCATCGACTCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GSWSHCSLSHCP*GPPTRAPSTRL Trigger: AAGCCGAGTCGATGGGGCTCTTGTCGGAGGACCCCAAGGGCAGTGACTCAGAGAACAGTGTGACCAAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 90 bp | CTCTCCAGCATGGTAAATCAGGTCCCCAGGAGCACAGTGAATGGTTaGGAACTCCACTGCCAAGGCACGCAGACATCCATCGCTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LSSMVNQVPRSTVNG*ELHCQGTQTSIAGQ Trigger: TTGGCCAGCGATGGATGTCTGCGTGCCTTGGCAGTGGAGTTCCAAACCATTCACTGTGCTCCTGGGGACCTGATTTACCATGCTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS TCA 72 bp | CACATACGCCAGAGACGTCTGGATGGGGGTAATCTGTaGTACGGTGACCACACTGGTACCTGTGATGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: HIRQRRLDGGNL*YGDHTGTCDGG Trigger: GCCTCCATCACAGGTACCAGTGTGGTCACCGTATCACAGATTACCCCCATCCAGACGTCTCTGGCGTATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 72 bp | TCCTTCCCAGATCCCTGCACTCGTATTGTAGCGATATaGGGTCCCAATGCTCAAGGCCAACTGGTAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SFPDPCTRIVAI*GPNAQGQLVEP Trigger: TGGCTCTACCAGTTGGCCTTGAGCATTGGGACCCCATATCGCTACAATACGAGTGCAGGGATCTGGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 72 bp | CAGCATGGTAAATCAGGTCCCCAGGAGCACAGTGAATaGTTTGGAACTCCACTGCCAAGGCACGCAGACATC | + |
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Preference number: 6 (lower is better) Translates to: QHGKSGPQEHSE*FGTPLPRHADI Trigger: GATGTCTGCGTGCCTTGGCAGTGGAGTTCCAAACCATTCACTGTGCTCCTGGGGACCTGATTTACCATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 90 bp | TTGGGTTCAGCGCCACCATTGGGCTTCAGTTCCATGGCATCGCGGTaGTTCTGCTTAAGAGACTCGCTGGTTTTCACATACGCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LGSAPPLGFSSMASR*FCLRDSLVFTYARD Trigger: GTCTCTGGCGTATGTGAAAACCAGCGAGTCTCTTAAGCAGAACAACCGCGATGCCATGGAACTGAAGCCCAATGGTGGCGCTGAACCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 72 bp | CTCTACCTGAAGCTGGCTCCTCTCAGGATCACTCTGTaGAGAGCCCTGGATCCTCAGTTCTTTCTGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LYLKLAPLRITL*RALDPQFFLLF Trigger: AAACAGCAGAAAGAACTGAGGATCCAGGGCTCTGCACAGAGTGATCCTGAGAGGAGCCAGCTTCAGGTAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 72 bp | AGCTGGATATCCTCCTTGAGTTCATGTTTGACTTCCTaGAGTGTGGTTTGTAAGGCCTGCTCGGGGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: SWISSLSSCLTS*SVVCKACSGMG Trigger: CCCCATCCCCGAGCAGGCCTTACAAACCACACTGCAGGAAGTCAAACATGAACTCAAGGAGGATATCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 72 bp | TGCTGTTTGAACTTCTGGAAGAGCTTCCTCACTGGGTaGTCCACGGGGATGCTCAGAGTCACCTCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CCLNFWKSFLTG*STGMLRVTSFF Trigger: GAAGAATGAGGTGACTCTGAGCATCCCCGTGGACCACCCAGTGAGGAAGCTCTTCCAGAAGTTCAAACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 72 bp | AGAGACTCGCTGGTTTTCACATACGCCAGAGACGTCTaGATGGGGGTAATCTGTGATACGGTGACCACACTG | + |
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Preference number: 6 (lower is better) Translates to: RDSLVFTYARDV*MGVICDTVTTL Trigger: CAGTGTGGTCACCGTATCACAGATTACCCCCATCCAGACGTCTCTGGCGTATGTGAAAACCAGCGAGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 72 bp | GCGCCACCATTGGGCTTCAGTTCCATGGCATCGCGGTaGTTCTGCTTAAGAGACTCGCTGGTTTTCACATAC | + |
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Preference number: 6 (lower is better) Translates to: APPLGFSSMASR*FCLRDSLVFTY Trigger: GTATGTGAAAACCAGCGAGTCTCTTAAGCAGAACAACCGCGATGCCATGGAACTGAAGCCCAATGGTGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 90 bp | GTCATTCTGCAGCTTAGCAGCTGGATATCCTCCTTGAGTTCATGTTaGACTTCCTGCAGTGTGGTTTGTAAGGCCTGCTCGGGGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: VILQLSSWISSLSSC*TSCSVVCKACSGMG Trigger: CCCCATCCCCGAGCAGGCCTTACAAACCACACTGCAGGAAGTCAAACATGAACTCAAGGAGGATATCCAGCTGCTAAGCTGCAGAATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 72 bp | TCCCTGCACTCGTATTGTAGCGATATGGGGTCCCAATaGTCAAGGCCAACTGGTAGAGCCAGCTGTCTATTT | + |
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Preference number: 6 (lower is better) Translates to: SLHSYCSDMGSQ*SRPTGRASCLF Trigger: AAATAGACAGCTGGCTCTACCAGTTGGCCTTGAGCATTGGGACCCCATATCGCTACAATACGAGTGCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 72 bp | CCATTGGGCTTCAGTTCCATGGCATCGCGGTTGTTCTaGTTAAGAGACTCGCTGGTTTTCACATACGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PLGFSSMASRLF*LRDSLVFTYAR Trigger: TCTGGCGTATGTGAAAACCAGCGAGTCTCTTAAGCAGAACAACCGCGATGCCATGGAACTGAAGCCCAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 72 bp | CCCTTCCCATTTCCGTTTTTCATCCTGATGGGGCTGTaGACCTTGAGACATTTGGGTTCAGCGCCACCATTG | + |
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Preference number: 6 (lower is better) Translates to: PFPFPFFILMGL*TLRHLGSAPPL Trigger: CAATGGTGGCGCTGAACCCAAATGTCTCAAGGTCAACAGCCCCATCAGGATGAAAAACGGAAATGGGAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS GCA 72 bp | CAAGGCACGCAGACATCCATCGCTGGCCAATCGGAATaGAGGATGTTCATTAAAAACCTTCCGGTTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: QGTQTSIAGQSE*RMFIKNLPVQM Trigger: CATCTGAACCGGAAGGTTTTTAATGAACATCCTGCATTCCGATTGGCCAGCGATGGATGTCTGCGTGCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 90 bp | TTTTCCAGGGCAGTCATTCTGCAGCTTAGCAGCTGGATATCCTCCTaGAGTTCATGTTTGACTTCCTGCAGTGTGGTTTGTAAGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: FSRAVILQLSSWISS*SSCLTSCSVVCKAC Trigger: GCAGGCCTTACAAACCACACTGCAGGAAGTCAAACATGAACTCAAGGAGGATATCCAGCTGCTAAGCTGCAGAATGACTGCCCTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 72 bp | TGCTTTTCCAGGGCAGTCATTCTGCAGCTTAGCAGCTaGATATCCTCCTTGAGTTCATGTTTGACTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CFSRAVILQLSS*ISSLSSCLTSC Trigger: GCAGGAAGTCAAACATGAACTCAAGGAGGATATCCAGCTGCTAAGCTGCAGAATGACTGCCCTGGAAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 90 bp | TGGGGTCCCAATGCTCAAGGCCAACTGGTAGAGCCAGCTGTCTATTaGAATGGTGTTGGTGACTTCATCAATGACCTCATAGTCTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: WGPNAQGQLVEPAVY*NGVGDFINDLIVSN Trigger: ATTGGAGACTATGAGGTCATTGATGAAGTCACCAACACCATTCAAATAGACAGCTGGCTCTACCAGTTGGCCTTGAGCATTGGGACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS TCA 72 bp | TCGGGTGACTCAGGCCTTGAGACACTAAAAATATCCTaGCATGGTATTTGGGGAGGTACTTGGAGTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: SGDSGLETLKIS*HGIWGGTWSGI Trigger: AATTCCACTCCAAGTACCTCCCCAAATACCATGTCAGGATATTTTTAGTGTCTCAAGGCCTGAGTCACCCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 90 bp | GCAAACTTCGTCCAACCTTTCGTTGAGTCATCCTCTATAGGCTGTTaGAACAGTGTAATGTCCTTGAATGTACACAGGAACAAGACCACC | + |
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Preference number: 6 (lower is better) Translates to: ANFVQPFVESSSIGC*NSVMSLNVHRNKTT Trigger: GGTGGTCTTGTTCCTGTGTACATTCAAGGACATTACACTGTTCAAACAGCCTATAGAGGATGACTCAACGAAAGGTTGGACGAAGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CCA 72 bp | CAGGAACAAGACCACCTTCTCGTGTTCATTTCTTATTaGTGCGATTTGCATGTAAAACCAAACAGGGGTACG | + |
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Preference number: 6 (lower is better) Translates to: QEQDHLLVFISY*CDLHVKPNRGT Trigger: CGTACCCCTGTTTGGTTTTACATGCAAATCGCACCAATAAGAAATGAACACGAGAAGGTGGTCTTGTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 72 bp | AATGCTCAAGGCCAACTGGTAGAGCCAGCTGTCTATTaGAATGGTGTTGGTGACTTCATCAATGACCTCATA | + |
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Preference number: 6 (lower is better) Translates to: NAQGQLVEPAVY*NGVGDFINDLI Trigger: TATGAGGTCATTGATGAAGTCACCAACACCATTCAAATAGACAGCTGGCTCTACCAGTTGGCCTTGAGCATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 72 bp | GTCCAACCTTTCGTTGAGTCATCCTCTATAGGCTGTTaGAACAGTGTAATGTCCTTGAATGTACACAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VQPFVESSSIGC*NSVMSLNVHRN Trigger: GTTCCTGTGTACATTCAAGGACATTACACTGTTCAAACAGCCTATAGAGGATGACTCAACGAAAGGTTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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| CDS CAA 72 bp | TCACTAATTTTACGGAAGATGATCCGCTTCCTTAGATaGCAAGTGAGAGTGAGGTTCCTGGAAAATGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLILRKMIRFLR*QVRVRFLENEF Trigger: AAACTCATTTTCCAGGAACCTCACTCTCACTTGCAATCTAAGGAAGCGGATCATCTTCCGTAAAATTAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042299.4 |
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