Pregenerated sensors for KCNH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037579Ensembl transcript IDs: ENSMUST00000041415.5
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTaGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: TSAPIWQAEGGQAGQ*SRACGSLAWGLPEA Trigger: AGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCACTGAGCAGCCCTGTGTaGCTAGGCGGAGCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GQWSRACGSLAWGLPEAPLSSPV*LGGAAG Trigger: ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAG...TGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCCTGGCAGGCAGAGGGTaGACAAGCAGGTCAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VETGTCKEWQNPSPSSDLLAGRG*TSRSVE Trigger: CTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAG...GAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| 3UTR CCA 72 bp | CCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTaGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PIWQAEGGQAGQ*SRACGSLAWGL Trigger: CAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CCTCCCCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAAGGGCCAGGGCGCCATaGGGGGAGGGGGTTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PPRPQTSAPIWQAEGGQARARAP*GEGVAL Trigger: CAGGGCAACCCCCTCCCCTCATGGCGCCCTGGCCCT...TGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGGGGAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTCTCCCAGGTTGTAGCTaGGCTCCCCTCGGAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLRLPALSSPVWLGGAAGLPGCS*APLGGH Trigger: GTGGCCTCCGAGGGGAGCTCAGCTACAACCTGGGAG...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | GCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGCACGGCTCCTCTCCTaGTCCCCGGGGACACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: APIWQAEGGQAGQWSRACARLLS*SPGTLA Trigger: GGCCAGTGTCCCCGGGGATCAGGAGAGGAGCCGTGC...ACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAGCTGGTACTCGCCCGGCGTaGAGAAGGCCGGCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QWSRACGSLAWGLPEAPAGTRPA*RRPASG Trigger: CCCTGAGGCCGGCCTTCTGCACGCCGGGCGAGTACC...AGCTGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGACTACTTGTTCCCGCTaGGGCAGCTCGCAGCCGATC | + |
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Preference number: 4 (lower is better) Translates to: PQAPCPEQPCVARRSSRWTTCSR*GSSQPI Trigger: GATCGGCTGCGAGCTGCCCCAGCGGGAACAAGTAGT...CCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | GGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCATGCCCTGGACGGGGGTaGGGCCAGGTCCCACTCAAA | + |
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Preference number: 4 (lower is better) Translates to: GQWSRACGSLAWGLPEAPCPGRG*GQVPLK Trigger: TTTGAGTGGGACCTGGCCTCACCCCCGTCCAGGGCA...TGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTCAGGCAGTAGGACGATaGCCCAGTGTCCACACGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLRLPALSSPVWLGGAAGQAVGR*PSVHTQ Trigger: CTGCGTGTGGACACTGGGGCATCGTCCTACTGCCTG...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGGTCCACTGGACCGTaGCAGGACCGTGGCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: APIWQAEGGQAGQWSRACGSTGP*QDRGSQ Trigger: TTGGCTGCCACGGTCCTGGCACGGTCCAGTGGACCC...ACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAGGCCACGGGCAGCACTaGGTTCCCGTGCTGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GQWSRACGSLAWGLPEAPGHGQH*VPVLCS Trigger: TGAGCACAGCACGGGAACCCAGTGCTGCCCGTGGCC...TGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGCGACAGCAGGGGACTaGAGGGCTCATCTGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: APIWQAEGGQAGQWSRACATAGD*RAHLLG Trigger: CCCCAGCAGATGAGCCCTCCAGTCCCCTGCTGTCGC...ACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGTGGGGAGAGTAGTTTaGCGGCTGAGGAGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLRLPALSSPVWLGGAAGVGRVV*RLRRRR Trigger: CCTCCTCCTCCTCAGCCGCCAAACTACTCTCCCCAC...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCGGGAGGGGGTTGCCCTaGACGGGGGTGAGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLGRGLP*TGVRPG Trigger: ACCTGGCCTCACCCCCGTCCAGGGCAACCCCCTCCC...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCGGAGCTCTGAGATGCTaGGGGGCCCCAGGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLGALRC*GAPGPG Trigger: CCCTGGCCCTGGGGCCCCCCAGCATCTCAGAGCTCC...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCACTGGCTCACAGGTGCTaGGGTCCCAGTCCTAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSLAHRC*GPSPSP Trigger: GGGGCTAGGACTGGGACCCCAGCACCTGTGAGCCAG...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | GGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCACATCGCCTTGGTGAATaGGGTACTCGCCCGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: GQWSRACGSLAWGLPEAPHRLGE*GTRPAC Trigger: GCACGCCGGGCGAGTACCTCATTCACCAAGGCGATG...TGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | TCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCGCACGGTGCCACCTTTaGGGACCTCCATGGAACCCG | + |
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Preference number: 4 (lower is better) Translates to: SAPIWQAEGGQAGQWSRAARCHL*GPPWNP Trigger: CGGGTTCCATGGAGGTCCTCAAAGGTGGCACCGTGC...GGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | TCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCATCTGCTGGGGCTGGTaGGACCGTGTGTCCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SAPIWQAEGGQAGQWSRAICWGW*DRVSLL Trigger: GAGCAGGGACACACGGTCTCACCAGCCCCAGCAGAT...GGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCACACAGCCTGGCGAAGTaGCTGCAGTCCCTCCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSHSLAK*LQSLPH Trigger: ATGCGGGAGGGACTGCAGTCACTTCGCCAGGCTGTG...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GTGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCCTGCGTGCCAGCTCCTaGAGCCAGCCGATCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VETGTCKEWQNPSPSSDLLRASS*SQPISG Trigger: GCCTGAGATCGGCTGGCTGCAGGAGCTGGCACGCAG...GAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGTGCCACTGCTGCTGCTaGTGCTGCTGCAGTTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: PQAPCPEQPCVARRSSRWCHCCC*CCCSFH Trigger: GTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCA...CCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGCGCCACCGCTGCCACTaGTGCTGCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRGWTSRSVEQSLWISSLRHRCH*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCG...CAGGCTAGAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCGTGTCTGTGTTTCTTaGTTCACTGGGCCCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PQAPCPEQPCVARRSSRWRVCVS*FTGPQG Trigger: CCCTTGGGGCCCAGTGAAGCAAGAAACACAGACACG...CCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTAGCCTGGCTCACAGGTaGTGGGGTCCCAGTCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: APIWQAEGGQAGQWSRACSLAHR*WGPSPS Trigger: GCTAGGACTGGGACCCCAGCACCTGTGAGCCAGGCT...ACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGCTCACTGGTGTCTaGCCCATAGAGGAAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PQAPCPEQPCVARRSSRWQLTGV*PIEEGA Trigger: TGCTCCTTCCTCTATGGGCCAGACACCAGTGAGCTG...CCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAGCTGTCACAGACACTAGGTaGGCCACGGGCAGCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: QWSRACGSLAWGLPEAPAVTDTR*ATGSTG Trigger: CCCAGTGCTGCCCGTGGCCCACCTAGTGTCTGTGAC...AGCTGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGCTGCTGCTACATTCTaGGCCAGACTGACCCACTCG | + |
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Preference number: 4 (lower is better) Translates to: SLRLPALSSPVWLGGAAGAAATF*ARLTHS Trigger: CGAGTGGGTCAGTCTGGCCCAGAATGTAGCAGCAGC...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | GGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAGCCTCCGATTGGCATTaGAGCCTTTGGATCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GQWSRACGSLAWGLPEAPASDWH*SLWIRP Trigger: GGGCCGGATCCAAAGGCTTCAATGCCAATCGGAGGC...TGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | GGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGACGCAGGCCACCCAGTaGGCGAGCAGGGCGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: GRGWTSRSVEQSLWISSLTQATQ*ASRAKT Trigger: TGTCTTCGCCCTGCTCGCTCACTGGGTGGCCTGCGT...CAGGCTAGAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCACGAAGTACAGGGAGGTaGTGTAGGCGCTGCGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSRSTGR*CRRCVG Trigger: CCCTACGCAGCGCCTACATCACCTCCCTGTACTTCG...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAGCTAGAGCATCGCCTTGGTaGATGAGGTACTCGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: QWSRACGSLAWGLPEAPARASPW*MRYSPG Trigger: GCCGGGCGAGTACCTCATTCACCAAGGCGATGCTCT...AGCTGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTCATTCTGGGCCAGACTaGCCCACTCGGAAAGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SLRLPALSSPVWLGGAAGHSGPD*PTRKEN Trigger: GTTCTCTTTCCGAGTGGGTCAGTCTGGCCCAGAATG...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | TGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCTCTCAGAAGGAGGGGGTaGGGCTGGTGTGCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: WRRAHARNGRTPPRPQTSLRRRG*GWCAGL Trigger: GAGCCCAGCACACCAGCCTCACCCCCTCCTTCTGAG...AGAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTACAGGCACAGCCCCGCTaGATGACCTCAGCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CPEQPCVARRSSRWQVFVQAQPR*MTSALE Trigger: CTCCAGAGCTGAGGTCATGCAGCGGGGCTGTGCCTG...TACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCACTGGGGAGGGGCTGCTaGTACATTCTGGGCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSLGRGC*YILGQT Trigger: AGTCTGGCCCAGAATGTAGCAGCAGCCCCTCCCCAG...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCATTCCTGGGGAGGGGCTaGTGCTACATTCTGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSFLGRG*CYILGQ Trigger: CTGGCCCAGAATGTAGCAGCAGCCCCTCCCCAGGAA...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGAAGAGCCCCGCCACCTaGGCGTTGCCCAGCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: GRGWTSRSVEQSLWISSLKSPAT*ALPSTK Trigger: CTTCGTGCTGGGCAACGCCCAGGTGGCGGGGCTCTT...CAGGCTAGAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTCCTTGTGCAGGTGCATaGCGATGTCTGCACGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLRLPALSSPVWLGGAAGPCAGA*RCLHEA Trigger: AGCTTCGTGCAGACATCGCCATGCACCTGCACAAGG...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCATGCCATCTACGACCCTaGGGCTCAGGTCTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSCHLRP*GSGLGV Trigger: TACCCCCAGACCTGAGCCCCAGGGTCGTAGATGGCA...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTACTGGTAGCCTCAGCCTaGCTCACAGGTGCTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CPEQPCVARRSSRWQVFVLVASA*LTGAGV Trigger: GACCCCAGCACCTGTGAGCCAGGCTGAGGCTACCAG...TACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | TCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCAGGGCAGTGCTGCTATaGCATCCAGCAGGAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SAPIWQAEGGQAGQWSRARAVLL*HPAGTR Trigger: CCTGGTTCCTGCTGGATGTCATAGCAGCACTGCCCT...GGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAAACCGCGCTGTACTGTaGGTACCGGTCCAGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSNRAVL*VPVQSW Trigger: CCAAGACTGGACCGGTACTCACAGTACAGCGCGGTT...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCTGGAGGTGGTAGAGAACTaGCCGGCTCCGCCTCCGATT | + |
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Preference number: 4 (lower is better) Translates to: GDGHMQGMAEPLPVLRPLEVVEN*PAPPPI Trigger: AATCGGAGGCGGAGCCGGGCAGTTCTCTACCACCTC...CAGAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCCTCGCAGGTCACGAGTaGGGCTGTGGTACAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPIWQAEGGQAGQWSRALAGHE*GCGTES Trigger: GCTTTCTGTACCACAGCCGCACTCGTGACCTGCGAG...GGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCGCCTGGCGAAGTGACTaGAGTCCCTCCCGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLAWRSD*SPSRIC Trigger: GCAGATGCGGGAGGGACTGCAGTCACTTCGCCAGGC...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CCTCCCCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGTACATTCCATGGCATaGGGGGTAGCTGCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPRPQTSAPIWQAEGGQAVHSMA*GVAAAH Trigger: ATGGGCTGCAGCTACCCCCCATGCCATGGAATGTAC...TGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTAGGTCCATAAAGCTGTaGCTCGAGGCCAAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: APIWQAEGGQAGQWSRACRSIKL*LEAKGS Trigger: GCTCCCCTTGGCCTCGAGCCACAGCTTTATGGACCT...ACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCTCTTCCTGGGTCCACTaGACCGTGCCAGGACCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGRQRVDKQVSGAEPVDLSSWVH*TVPGPW Trigger: CCACGGTCCTGGCACGGTCCAGTGGACCCAGGAAGA...GAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | TGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTATCGCTGATGTCCTTGTaGGAGACCAGGAAGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPEQPCVARRSSRWQVFVSLMSL*ETRKRA Trigger: GGCCCTCTTCCTGGTCTCTCACAAGGACATCAGCGA...TACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTGCATGGCGATGTCTaGACGAAGCTCATCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPEQPCVARRSSRWQVFVVHGDV*TKLIRE Trigger: CTCCCGGATGAGCTTCGTGCAGACATCGCCATGCAC...TACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTATGCAGCCCAGCCAACTaGAGACACTGTAGGACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPEQPCVARRSSRWQVFVCSPAN*RHCRTQ Trigger: CTGCGTCCTACAGTGTCTGCAGTTGGCTGGGCTGCA...TACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAGCTAGAGCAAGGCTCTCATaGAGCCCAGCCAACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QWSRACGSLAWGLPEAPARARLS*SPANCR Trigger: TCTGCAGTTGGCTGGGCTGCATGAGAGCCTTGCTCT...AGCTGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCATGCAGCCATCTTCAATaGCATCTACGACCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQWSRACGSLAWGLPEAPCSHLQ*HLRPWG Trigger: GCCCCAGGGTCGTAGATGGCATTGAAGATGGCTGCA...TGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTCACACACACACTGTATaGCACAGTGACTGCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLPALSSPVWLGGAAGHTHTV*HSDCHV Trigger: TACGTGGCAGTCACTGTGCCATACAGTGTGTGTGTG...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTATCACGAGTGCGGCTGTaGTACAGAAAGCGGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPEQPCVARRSSRWQVFVSRVRL*YRKRRA Trigger: TGCTCGCCGCTTTCTGTACCACAGCCGCACTCGTGA...TACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCATCTCCCACTGGCCTTCCCCTTaGGGCACCAGGATGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCVARRSSRWQVFVVLISHWPSP*GTRMSC Trigger: GCAGCTCATCCTGGTGCCCCAAGGGGAAGGCCAGTG...GGAGATGAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | GCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGTTCTTGGTCTCGCTaGTGTCCTTGTGAGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: APIWQAEGGQAGQWSRACGSWSR*CPCERP Trigger: TGGTCTCTCACAAGGACATCAGCGAGACCAAGAACC...ACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGAAATACCACCTGGCCTaGCTTGGACACAAATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQAPCPEQPCVARRSSRWKYHLA*LGHKCS Trigger: ACTACATTTGTGTCCAAGTCAGGCCAGGTGGTATTT...CCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCGACCGTGGCAGCCAATaGGCACCATCTCTAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIDRGSQ*APSLGC Trigger: ACAGCCTAGAGATGGTGCTCATTGGCTGCCACGGTC...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGTGGGTTCCCGTGCTGTaGTCACACACACACTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PPSGRQRVDKQVSGAEPVWVPVL*SHTHCM Trigger: CATACAGTGTGTGTGTGAGCACAGCACGGGAACCCA...CACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTCCAAACACCACTGCATaGATTAGAGCTCCGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLPALSSPVWLGGAAGPNTTA*IRAPIS Trigger: GCTTATCGGAGCTCTAATGCATGCAGTGGTGTTTGG...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCATGCAGGACTTCCTTGTaGAGGTGCATGGCGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSCRTSL*RCMAMS Trigger: AGACATCGCCATGCACCTGCACAAGGAAGTCCTGCA...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCACAGCCCCTTCACGTCTaGATTGGCCTTCACTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQWSRACGSLAWGLPEAPQPLHV*IGLHYL Trigger: CAAGTAGTGAAGGCCAATGCAGACGTGAAGGGGCTG...TGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCGAGACCGTGTGTCCCTaGTCCCCATCTGTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLETVCP*SPSVSF Trigger: GAAGGAGACAGATGGGGAGCAGGGACACACGGTCTC...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCTAGGCTTCAAAACCCCTaGCCTACTTGGCCGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WRRAHARNGRTPPRPQTSRLQNP*PTWPPS Trigger: AGAGGGCGGCCAAGTAGGGCAGGGGTTTTGAAGCCT...AGAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGAGGCAAATGGACTTTaGGGCAAATACCACCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: APIWQAEGGQAGQWSRACEANGL*GKYHLA Trigger: GGCCAGGTGGTATTTGCCCCAAAGTCCATTTGCCTC...ACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCGCTGTTCCCTCCATCTaGACTCCGGCTCACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIAVPSI*TPAHQV Trigger: TACCTGGTGAGCCGGAGTCCAGATGGAGGGAACAGC...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTCGAGCATACATGCGCTaGATGATGGCCGTCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: APIWQAEGGQAGQWSRACRAYMR*MMAVTF Trigger: GAATGTGACGGCCATCATCCAGCGCATGTATGCTCG...ACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCTCACCCTTCCCTAGAATaGCGAGCACGGTGCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: WRRAHARNGRTPPRPQTSHPSLE*RARCHL Trigger: AAGGTGGCACCGTGCTCGCCATTCTAGGGAAGGGTG...AGAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCATGAGCTGCACAGCCTaGCGAAGTGACTGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLMSCTA*RSDCSP Trigger: GGGACTGCAGTCACTTCGCCAGGCTGTGCAGCTCAT...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCGTGAGGCTGGTGTGCTaGGCTCAGAGCAGAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIVRLVC*AQSRDL Trigger: GAGATCTCTGCTCTGAGCCCAGCACACCAGCCTCAC...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | GGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGCACTGTATGGCACAGTaGCTGCCACGTAGAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGWTSRSVEQSLWISSLHCMAQ*LPRRVW Trigger: CCACACTCTACGTGGCAGTCACTGTGCCATACAGTG...CAGGCTAGAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCCCTCCAGTGTGGACATaGGGGTGTTGTCACCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIPPVWT*GCCHHS Trigger: TGAGTGGTGACAACACCCTCATGTCCACACTGGAGG...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | AGTGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTTGCTTGCCCTTGGGTTaGTTCTGCAGATGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGDGHMQGMAEPLPVLRPCLPLG*FCRWPE Trigger: CTCTGGCCATCTGCAGAAGCAACCCAAGGGCAAGCA...AGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGCCCTTATTGAGCTTGTaGTTGCCCTTGGGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSGRQRVDKQVSGAEPVPLLSL*LPLGCF Trigger: GAAGCAACCCAAGGGCAAGCACAAGCTCAATAAGGG...CACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCTCTCAGAGCCCCACAGTaGAGCAGGATAAAGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WRRAHARNGRTPPRPQTSLRAPQ*SRIKGD Trigger: GTCACCCTTTATCCTGCTGCACTGTGGGGCTCTGAG...AGAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCAGCACTGGGTTCCCGTaGTGTGCTCACACACACACT | + |
|
Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLSTGFP*CAHTHT Trigger: AGTGTGTGTGTGAGCACAGCACGGGAACCCAGTGCT...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCACTCAAAACCGAACCTaGTGGGGGCTGCAGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGRQRVDKQVSGAEPVDLTQNRT*WGLQAV Trigger: TACTGCCTGCAGCCCCCAGCAGGTTCGGTTTTGAGT...GAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | CCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCATCTCCGCCTTTCGGATCTGTTaGCGGACCAGCTCACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCVARRSSRWQVFVVLISAFRIC*RTSSLV Trigger: CACCAGTGAGCTGGTCCGCCAACAGATCCGAAAGGC...GGAGATGAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTCTGCAGTTTTCACTCTaGCCAGAGCTGTTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLRPLPPSGRQRVDKQVSLQFSL*PELFPP Trigger: TGGAGGGAACAGCTCTGGCCAGAGTGAAAACTGCAG...ACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | GTGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCGTCAAAGGGCAGTGCTaGTATGACATCCAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VETGTCKEWQNPSPSSDLVKGQC*YDIQQE Trigger: TTCCTGCTGGATGTCATAGCAGCACTGCCCTTTGAC...GAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCACTTCCTTGTGCAGGTaGATGGCGATGTCTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SGRQRVDKQVSGAEPVDLTSLCR*MAMSAR Trigger: TCGTGCAGACATCGCCATGCACCTGCACAAGGAAGT...GAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCACAGCCCAGGTGGCTTaGAAGTACTCCAGCATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLTAQVA*KYSSIR Trigger: ACGAATGCTGGAGTACTTCCAAGCCACCTGGGCTGT...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | AGTGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTTGTTCACAGCCCAGGTaGCTTGGAAGTACTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGDGHMQGMAEPLPVLRPCSQPR*LGSTPA Trigger: TGCTGGAGTACTTCCAAGCCACCTGGGCTGTGAACA...AGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCCAAACACTCCCTTATTaGGCTTGTGCTTGCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIQTLPY*ACACPW Trigger: CCAAGGGCAAGCACAAGCTCAATAAGGGAGTGTTTG...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | CCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCATCTCCCACTGCTGCTGCTGCTaGTGCTGCAGTTTTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCVARRSSRWQVFVVLISHCCCC*CCSFHS Trigger: AGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTG...GGAGATGAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | TCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCGGGGCAAATACCACCTaGCCTGACTTGGACACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGRQRVDKQVSGAEPVDLGANTT*PDLDTN Trigger: ATTTGTGTCCAAGTCAGGCCAGGTGGTATTTGCCCC...GAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCAAAGAGAACTTGGGCTaGTCAGAGCTGCAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLKENLG*SELQPS Trigger: AGATGGCTGCAGCTCTGACCAGCCCAAGTTCTCTTT...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR GCA 90 bp | TGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCTGCCTTGAATTCTTTGTaGTCATCTAGGGCCTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: WRRAHARNGRTPPRPQTSALNSL*SSRAFR Trigger: CCGAAAGGCCCTAGATGAGCACAAAGAATTCAAGGC...AGAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCCGTAGTGGAGGCAAATaGACTTTGGGGCAAATACCA | + |
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Preference number: 4 (lower is better) Translates to: EQPCVARRSSRWQVFVVLRSGGK*TLGQIP Trigger: TGGTATTTGCCCCAAAGTCCATTTGCCTCCACTACG...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR TCA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCGGATCAGTTCAGCCTTaGATTCTTTGTGCTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIGSVQP*ILCAHL Trigger: TAGATGAGCACAAAGAATTCAAGGCTGAACTGATCC...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | GGGACGGGCCACCCAGCAGCTCCAGCCCGGTCCCATTGGCTTCGCTaGCTCTGCCGCCACCGCTGCCACTGCTGCTGCTGCTGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GTGHPAAPARSHWLR*LCRHRCHCCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCAATGGGACCGGGCTGGAGCTGCTGGGTGGCCCGTCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | GGCCACCCAGCAGCTCCAGCCCGGTCCCATTGGCTTCGCTGCCTCTaGCGCCACCGCTGCCACTGCTGCTGCTGCTGCTGCTGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: GHPAAPARSHWLRCL*RHRCHCCCCCCCSF Trigger: AAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCAATGGGACCGGGCTGGAGCTGCTGGGTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | CACCCAACCTCGGCCGAGGCGCAGTTCGACGTGGGGAGAGTAGTTTaGCGGCTGAGGAGGAGGAGGTACAGCCGGGCGACAGCAGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: HPTSAEAQFDVGRVV*RLRRRRYSRATAGD Trigger: GTCCCCTGCTGTCGCCCGGCTGTACCTCCTCCTCCTCAGCCGCCAAACTACTCTCCCCACGTCGAACTGCGCCTCGGCCGAGGTTGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCACCCGCCACCTGGGCGTaGCCCAGCACGAAGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSPATWA*PSTKLL Trigger: CAGCAACTTCGTGCTGGGCAACGCCCAGGTGGCGGG...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAAGTACCGGTCCAGTCTaGGCAGCAGGCGCAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PPRPQTSAPIWQAEGGQASTGPV*AAGAAG Trigger: GCCTGCTGCGCCTGCTGCCAAGACTGGACCGGTACT...TGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGGGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 90 bp | CAGAGAGGTGGTAGAGAACTGCCCGGCTCCGCCTCCGATTGGCATTaGAGCCTTTGGATCCGGCCCGACCATATCGGCGCCGGCCACCGC | + |
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Preference number: 5 (lower is better) Translates to: QRGGRELPGSASDWH*SLWIRPDHIGAGHR Trigger: GCGGTGGCCGGCGCCGATATGGTCGGGCCGGATCCAAAGGCTTCAATGCCAATCGGAGGCGGAGCCGGGCAGTTCTCTACCACCTCTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | GCCCGGTCCCATTGGCTTCGCTGCCTCTGCCGCCACCGCTGCCACTaGTGCTGCTGCTGCTGCTGCAGTTTTCACTCTGGCCAGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: ARSHWLRCLCRHRCH*CCCCCCSFHSGQSC Trigger: ACAGCTCTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCAATGGGACCGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 90 bp | CTTCTTCCTGGGTCCACTGGACCGTGCCAGGACCGTGGCAGCCAATaGGCACCATCTCTAGGCTGTGGGGATCCCAGGGCAAGGCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: LLPGSTGPCQDRGSQ*APSLGCGDPRARLG Trigger: GCCGAGCCTTGCCCTGGGATCCCCACAGCCTAGAGATGGTGCTCATTGGCTGCCACGGTCCTGGCACGGTCCAGTGGACCCAGGAAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | CGGTCCCATTGGCTTCGCTGCCTCTGCCGCCACCGCTGCCACTGCTaGTGCTGCTGCTGCTGCAGTTTTCACTCTGGCCAGAGCTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: RSHWLRCLCRHRCHC*CCCCCSFHSGQSCS Trigger: GGAACAGCTCTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCAATGGGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | ATGAGCAGAAGGACCAGCCTCAGGCTTCAAAACCCCTGCCCTACTTaGCCGCCCTCTGCCACCCAACCTCGGCCGAGGCGCAGTTCGACG | + |
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Preference number: 5 (lower is better) Translates to: MSRRTSLRLQNPCPT*PPSATQPRPRRSST Trigger: CGTCGAACTGCGCCTCGGCCGAGGTTGGGTGGCAGAGGGCGGCCAAGTAGGGCAGGGGTTTTGAAGCCTGAGGCTGGTCCTTCTGCTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCACGTTGTTTGAGGGGTTaGGGGATGCGGTGGATGCGG | + |
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Preference number: 5 (lower is better) Translates to: PPRPQTSAPIWQAEGGQARCLRG*GMRWMR Trigger: CCGCATCCACCGCATCCCCAAACCCCTCAAACAACG...TGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGGGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 90 bp | GGCGAAGACAGCCATGAGCAAGGTGAGCACAACCGCGCTGTACTGTaGGTACCGGTCCAGTCTTGGCAGCAGGCGCAGCAGGCGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: GEDSHEQGEHNRAVL*VPVQSWQQAQQAQQ Trigger: CTGCTGCGCCTGCTGCGCCTGCTGCCAAGACTGGACCGGTACTCACAGTACAGCGCGGTTGTGCTCACCTTGCTCATGGCTGTCTTCGCC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | TGGCTTCGCTGCCTCTGCCGCCACCGCTGCCACTGCTGCTGCTGCTaGTGCTGCAGTTTTCACTCTGGCCAGAGCTGTTCCCTCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: WLRCLCRHRCHCCCC*CCSFHSGQSCSLHL Trigger: CAGATGGAGGGAACAGCTCTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | TCCCATTGGCTTCGCTGCCTCTGCCGCCACCGCTGCCACTGCTGCTaGTGCTGCTGCTGCAGTTTTCACTCTGGCCAGAGCTGTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: SHWLRCLCRHRCHCC*CCCCSFHSGQSCSL Trigger: GAGGGAACAGCTCTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCAATGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAGCTTTGCCCAGCACGAAGTaGCTGTGCGTCCCGTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: QWSRACGSLAWGLPEAPALPSTK*LCVPSK Trigger: CTTCGACGGGACGCACAGCAACTTCGTGCTGGGCAA...AGCTGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGCGCCTCCGATTGGCATaGAAGCCTTTGGATCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: PPSGRQRVDKQVSGAEPVRLRLA*KPLDPA Trigger: GGCCGGATCCAAAGGCTTCAATGCCAATCGGAGGCG...CACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | CATTGGCTTCGCTGCCTCTGCCGCCACCGCTGCCACTGCTGCTGCTaGTGCTGCTGCAGTTTTCACTCTGGCCAGAGCTGTTCCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: HWLRCLCRHRCHCCC*CCCSFHSGQSCSLH Trigger: ATGGAGGGAACAGCTCTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | GGACTGGAGGGCTCATCTGCTGGGGCTGGTGAGACCGTGTGTCCCTaGTCCCCATCTGTCTCCTTCTCCTCCAGTGTGGACATGAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: GLEGSSAGAGETVCP*SPSVSFSSSVDMRV Trigger: CACCCTCATGTCCACACTGGAGGAGAAGGAGACAGATGGGGAGCAGGGACACACGGTCTCACCAGCCCCAGCAGATGAGCCCTCCAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | GCTGCTGCTGCAGTTTTCACTCTGGCCAGAGCTGTTCCCTCCATCTaGACTCCGGCTCACCAGGTAGTAGGGGGTCTCCAGCCTGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: AAAAVFTLARAVPSI*TPAHQVVGGLQPAC Trigger: GCACGCAGGCTGGAGACCCCCTACTACCTGGTGAGCCGGAGTCCAGATGGAGGGAACAGCTCTGGCCAGAGTGAAAACTGCAGCAGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | TCCCAGGTTGTAGCTGAGCTCCCCTCGGAGGCCACGGCTAAAGCGTaGGGCAAACTCAGGGTACAGAGCAAGGCTCTCATGCAGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SQVVAELPSEATAKA*GKLRVQSKALMQPS Trigger: GCTGGGCTGCATGAGAGCCTTGCTCTGTACCCTGAGTTTGCCCCACGCTTTAGCCGTGGCCTCCGAGGGGAGCTCAGCTACAACCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | TGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGGGCCTCCTCGGTTCTaGGTCTCGCTGATGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: CPEQPCVARRSSRWQVFVGPPRF*VSLMSL Trigger: CAAGGACATCAGCGAGACCAAGAACCGAGGAGGCCC...TACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGCCCCAACGTACACGTaGACCTTGAAGGCATGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SLRLPALSSPVWLGGAAGAPTYT*TLKACS Trigger: ACTACATGCCTTCAAGGTCAACGTGTACGTTGGGGC...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCCGTGGGGAGAGTAGTTaGGCGGCTGAGGAGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIRGESS*AAEEEE Trigger: CTCCTCCTCCTCAGCCGCCAAACTACTCTCCCCACG...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGCGTGTCTGTGTTTCTaGCTTCACTGGGCCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSACLCF*LHWAPR Trigger: CCTTGGGGCCCAGTGAAGCAAGAAACACAGACACGC...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 90 bp | GGCAGCAGGCGCAGCAGGCGCAGCAGTCGCACGGTCTTCAGGAGGTaGGCCCCAACGTACACGTTGACCTTGAAGGCATGTAGTAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: GSRRSRRSSRTVFRR*APTYTLTLKACSRS Trigger: TGACCTACTACATGCCTTCAAGGTCAACGTGTACGTTGGGGCTCACCTCCTGAAGACCGTGCGACTGCTGCGCCTGCTGCGCCTGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | GCCCTTGGGTTGCTTCTGCAGATGGCCAGAGAGGTGGTAGAGAACTaGCCGGCTCCGCCTCCGATTGGCATTGAAGCCTTTGGATCCGGC | + |
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Preference number: 5 (lower is better) Translates to: ALGLLLQMAREVVEN*PAPPPIGIEAFGSG Trigger: GCCGGATCCAAAGGCTTCAATGCCAATCGGAGGCGGAGCCGGGCAGTTCTCTACCACCTCTCTGGCCATCTGCAGAAGCAACCCAAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | ATGAGCTGCACAGCCTGGCGAAGTGACTGCAGTCCCTCCCGCATCTaGAGCACCTGTTCAGACAGCTCCATCACCGCCTGCCGTAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: MSCTAWRSDCSPSRI*STCSDSSITACRSL Trigger: CAAGCTACGGCAGGCGGTGATGGAGCTGTCTGAACAGGTGCTGCAGATGCGGGAGGGACTGCAGTCACTTCGCCAGGCTGTGCAGCTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | TGTGCTCATCTAGGGCCTTTCGGATCTGTTGGCGGACCAGCTCACTaGTGTCTGGCCCATAGAGGAAGGAGCAGGCACAGCCCCGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: CAHLGPFGSVGGPAH*CLAHRGRSRHSPAA Trigger: TGCAGCGGGGCTGTGCCTGCTCCTTCCTCTATGGGCCAGACACCAGTGAGCTGGTCCGCCAACAGATCCGAAAGGCCCTAGATGAGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | GTCAGCCCCTTCACGTCTGCATTGGCCTTCACTACTTGTTCCCGCTaGGGCAGCTCGCAGCCGATCAGGTCACCCTTCCCTAGAATGGCG | + |
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Preference number: 5 (lower is better) Translates to: VSPFTSALAFTTCSR*GSSQPIRSPFPRMA Trigger: CGCCATTCTAGGGAAGGGTGACCTGATCGGCTGCGAGCTGCCCCAGCGGGAACAAGTAGTGAAGGCCAATGCAGACGTGAAGGGGCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCGGCCTTTCGGATCTGTaGGCGGACCAGCTCACTGGT | + |
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Preference number: 5 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIGLSDL*ADQLTG Trigger: ACCAGTGAGCTGGTCCGCCAACAGATCCGAAAGGCC...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | GTGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTCCGGCTCCGCCTCCGATaGGCATTGAAGCCTTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: VETGTCKEWQNPSPSSDLRLRLR*ALKPLD Trigger: ATCCAAAGGCTTCAATGCCAATCGGAGGCGGAGCCG...GAGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | TCCCTCAGGCTCCCTGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTCCAAACACTCCCTTATaGAGCTTGTGCTTGCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLRLPALSSPVWLGGAAGPNTPL*SLCLPL Trigger: CAAGGGCAAGCACAAGCTCAATAAGGGAGTGTTTGG...ACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCAGGGAGCCTGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTAGCACGGTGCCACCTTaGAGGACCTCCATGGAACCC | + |
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Preference number: 5 (lower is better) Translates to: SGDGHMQGMAEPLPVLRPSTVPP*RTSMEP Trigger: GGGTTCCATGGAGGTCCTCAAAGGTGGCACCGTGCT...AGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | TGCCCTGAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTGGACATGAGGGTGTaGTCACCACTCAGGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPEQPCVARRSSRWQVFVVDMRV*SPLREL Trigger: CAGCTCCCTGAGTGGTGACAACACCCTCATGTCCAC...TACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTCAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | CAGGTCACAGACACTAGGTGGGCCACGGGCAGCACTGGGTTCCCGTaGTGTGCTCACACACACACTGTATGGCACAGTGACTGCCACGTA | + |
|
Preference number: 5 (lower is better) Translates to: QVTDTRWATGSTGFP*CAHTHTVWHSDCHV Trigger: TACGTGGCAGTCACTGTGCCATACAGTGTGTGTGTGAGCACAGCACGGGAACCCAGTGCTGCCCGTGGCCCACCTAGTGTCTGTGACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCATTGGCATTGAAGCCTTaGGATCCGGCCCGACCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSLALKP*DPARPY Trigger: ATATGGTCGGGCCGGATCCAAAGGCTTCAATGCCAA...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGCTGGAGAGCATCGCCTaGGTGAATGAGGTACTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGWTSRSVEQSLWISSLLESIA*VNEVLA Trigger: GGCGAGTACCTCATTCACCAAGGCGATGCTCTCCAG...CAGGCTAGAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | GGGTTCCCGTGCTGTGCTCACACACACACTGTATGGCACAGTGACTaGCACGTAGAGTGTGGCAAGCAGGATGAAGCCATCCCAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GFPCCAHTHTVWHSD*HVECGKQDEAIPGG Trigger: GCCACCTGGGATGGCTTCATCCTGCTTGCCACACTCTACGTGGCAGTCACTGTGCCATACAGTGTGTGTGTGAGCACAGCACGGGAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | ACGGGCAGCACTGGGTTCCCGTGCTGTGCTCACACACACACTGTATaGCACAGTGACTGCCACGTAGAGTGTGGCAAGCAGGATGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGSTGFPCCAHTHTV*HSDCHVECGKQDEA Trigger: GGCTTCATCCTGCTTGCCACACTCTACGTGGCAGTCACTGTGCCATACAGTGTGTGTGTGAGCACAGCACGGGAACCCAGTGCTGCCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | GCAGACACTGTAGGACGCAGTATGTCAGCCCCTTCACGTCTGCATTaGCCTTCACTACTTGTTCCCGCTGGGGCAGCTCGCAGCCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: ADTVGRSMSAPSRLH*PSLLVPAGAARSRS Trigger: TGATCGGCTGCGAGCTGCCCCAGCGGGAACAAGTAGTGAAGGCCAATGCAGACGTGAAGGGGCTGACATACTGCGTCCTACAGTGTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCATCTCCGTGCTTGCCCTTGGGTaGCTTCTGCAGATGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PCVARRSSRWQVFVVLISVLALG*LLQMAR Trigger: TCTGGCCATCTGCAGAAGCAACCCAAGGGCAAGCAC...GGAGATGAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAGCTTTATTGAGCTTGTGCTaGCCCTTGGGTTGCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QWSRACGSLAWGLPEAPALLSLC*PLGCFC Trigger: GCAGAAGCAACCCAAGGGCAAGCACAAGCTCAATAA...AGCTGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | GGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGGGCCTGCCTGAGGCTCCAACCACCTGGCCTGACTaGGACACAAATGTAGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: GQWSRACGSLAWGLPEAPTTWPD*DTNVVR Trigger: TCGTACTACATTTGTGTCCAAGTCAGGCCAGGTGGT...TGGAGCCTCAGGCAGGCCCCAGGCTAGAGATCCACAGGCTCTGCTCCACTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCGGAGGCAAATGGACTTaGGGGCAAATACCACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLAGRGWTSRSVEQSLWIGGKWT*GQIPPG Trigger: GCCAGGTGGTATTTGCCCCAAAGTCCATTTGCCTCC...GATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCGTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTACTCCAGCATTCGTaGTTTGAGGGGTTTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PSSDLCPHLAGRGWTSRSVLQHS*FEGFGD Trigger: ATCCCCAAACCCCTCAAACAACGAATGCTGGAGTAC...TGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCGTGGTATCGATGCCATaGTTCACAGCCCAGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQPCVARRSSRWQVFVVLVVSMP*FTAQVA Trigger: AGCCACCTGGGCTGTGAACAATGGCATCGATACCAC...GAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGGCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGACGGGCACATGCAAGGAATGGCAGAACCCCTCCCCGTCCTCAGACCTACTCGGAAAGAGAACTaGGGCTGGTCAGAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGDGHMQGMAEPLPVLRPTRKEN*GWSELQ Trigger: CTGCAGCTCTGACCAGCCCAAGTTCTCTTTCCGAGT...AGGTCTGAGGACGGGGAGGGGTTCTGCCATTCCTTGCATGTGCCCGTCTCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 90 bp | CGATCAGGTCACCCTTCCCTAGAATGGCGAGCACGGTGCCACCTTTaGGGACCTCCATGGAACCCGAGCAGACAAAATAGAGGGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSGHPSLEWRARCHL*GPPWNPSRQNRGPG Trigger: TCCAGGCCCTCTATTTTGTCTGCTCGGGTTCCATGGAGGTCCTCAAAGGTGGCACCGTGCTCGCCATTCTAGGGAAGGGTGACCTGATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | CGGCTAAAGCGTGGGGCAAACTCAGGGTACAGAGCAAGGCTCTCATaGAGCCCAGCCAACTGCAGACACTGTAGGACGCAGTATGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLKRGANSGYRARLS*SPANCRHCRTQYVS Trigger: GCTGACATACTGCGTCCTACAGTGTCTGCAGTTGGCTGGGCTGCATGAGAGCCTTGCTCTGTACCCTGAGTTTGCCCCACGCTTTAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | CCCTGTGTGGCTAGGCGGAGCAGCAGGTGGCAGGTGTTTGTAGTACTCATCTCCAGCTTGTGCTTGCCCTaGGGTTGCTTCTGCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PCVARRSSRWQVFVVLISSLCLP*GCFCRW Trigger: CCATCTGCAGAAGCAACCCAAGGGCAAGCACAAGCT...GGAGATGAGTACTACAAACACCTGCCACCTGCTGCTCCGCCTAGCCACACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | GCAAACTCAGGGTACAGAGCAAGGCTCTCATGCAGCCCAGCCAACTaGAGACACTGTAGGACGCAGTATGTCAGCCCCTTCACGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ANSGYRARLSCSPAN*RHCRTQYVSPFTSA Trigger: TGCAGACGTGAAGGGGCTGACATACTGCGTCCTACAGTGTCTGCAGTTGGCTGGGCTGCATGAGAGCCTTGCTCTGTACCCTGAGTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCTAGCCTGGCTGCTCTCAATCTCTaGCTGGCCGATGTAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGWTSRSVEQSLWISSLAALNL*LADVKP Trigger: TGGTTTTACATCGGCCAGCAAGAGATTGAGAGCAGC...CAGGCTAGAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 90 bp | TGTTCACAGCCCAGGTGGCTTGGAAGTACTCCAGCATTCGTTGTTTaGGGGGTTTGGGGATGCGGTGGATGCGGATGTAGTCTCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSQPRWLGSTPAFVV*GVWGCGGCGCSLAG Trigger: ACCTGCGAGACTACATCCGCATCCACCGCATCCCCAAACCCCTCAAACAACGAATGCTGGAGTACTTCCAAGCCACCTGGGCTGTGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 90 bp | TGCTGCTACATTCTGGGCCAGACTGACCCACTCGGAAAGAGAACTTaGGCTGGTCAGAGCTGCAGCCATCTTCAATGCCATCTACGACCC | + |
|
Preference number: 5 (lower is better) Translates to: CCYILGQTDPLGKRT*AGQSCSHLQCHLRP Trigger: GGGTCGTAGATGGCATTGAAGATGGCTGCAGCTCTGACCAGCCCAAGTTCTCTTTCCGAGTGGGTCAGTCTGGCCCAGAATGTAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | TCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTGGAGCAGAGCCTGTGGATCTCACGTACACGTTGACCTaGAAGGCATGTAGTAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGRQRVDKQVSGAEPVDLTYTLT*KACSRS Trigger: TGACCTACTACATGCCTTCAAGGTCAACGTGTACGT...GAGATCCACAGGCTCTGCTCCACTGACCTGCTTGTCCACCCTCTGCCTGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | GCAAGCAGGATGAAGCCATCCCAGGTGGCTCTCAGAGCCCCACAGTaGAGCAGGATAAAGGGTGACTTCCGGATAGCAGCGACTTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: ASRMKPSQVALRAPQ*SRIKGDFRIAATLY Trigger: ATATAAAGTCGCTGCTATCCGGAAGTCACCCTTTATCCTGCTGCACTGTGGGGCTCTGAGAGCCACCTGGGATGGCTTCATCCTGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGACCTCTGCCCCCATCTGGCAGGCAGAGGGTGGACAAGCAGGTCAGTAGGATCAGTTCAGCCTaGAATTCTTTGTGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VLRPLPPSGRQRVDKQVSRISSA*NSLCSS Trigger: AGATGAGCACAAAGAATTCAAGGCTGAACTGATCCT...ACTGACCTGCTTGTCCACCCTCTGCCTGCCAGATGGGGGCAGAGGTCTGAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 90 bp | AGCCCACTCTTCCGGTACAGGATCAGTTCAGCCTTGAATTCTTTGTaGTCATCTAGGGCCTTTCGGATCTGTTGGCGGACCAGCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLFRYRISSALNSL*SSRAFRICWRTSSL Trigger: CAGTGAGCTGGTCCGCCAACAGATCCGAAAGGCCCTAGATGAGCACAAAGAATTCAAGGCTGAACTGATCCTGTACCGGAAGAGTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 90 bp | ACCAGAATGGAAGCCCACTCTTCCGGTACAGGATCAGTTCAGCCTTaGATTCTTTGTGCTCATCTAGGGCCTTTCGGATCTGTTGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRMEAHSSGTGSVQP*ILCAHLGPFGSVGG Trigger: TCCGCCAACAGATCCGAAAGGCCCTAGATGAGCACAAAGAATTCAAGGCTGAACTGATCCTGTACCGGAAGAGTGGGCTTCCATTCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | GCAGCTCCAGCCCGGTCCCATTGGCTTCGCTGCCTCTaGCGCCACCGCTGCCACTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AAPARSHWLRCL*RHRCHCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCAATGGGACCGGGCTGGAGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | CCACCCAACCTCGGCCGAGGCGCAGTTCGACGTGGGGAGAGTAGTTaGGCGGCTGAGGAGGAGGAGGTACAGCCGGGCGACAGCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPNLGRGAVRRGESS*AAEEEEVQPGDSRG Trigger: TCCCCTGCTGTCGCCCGGCTGTACCTCCTCCTCCTCAGCCGCCAAACTACTCTCCCCACGTCGAACTGCGCCTCGGCCGAGGTTGGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | AGGACCAGCCTCAGGCTTCAAAACCCCTGCCCTACTTaGCCGCCCTCTGCCACCCAACCTCGGCCGAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RTSLRLQNPCPT*PPSATQPRPRR Trigger: GCGCCTCGGCCGAGGTTGGGTGGCAGAGGGCGGCCAAGTAGGGCAGGGGTTTTGAAGCCTGAGGCTGGTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | ACTGCCCGGCTCCGCCTCCGATTGGCATTGAAGCCTTaGGATCCGGCCCGACCATATCGGCGCCGGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: TARLRLRLALKP*DPARPYRRRPP Trigger: CGGTGGCCGGCGCCGATATGGTCGGGCCGGATCCAAAGGCTTCAATGCCAATCGGAGGCGGAGCCGGGCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | CTCGGCCGAGGCGCAGTTCGACGTGGGGAGAGTAGTTaGGCGGCTGAGGAGGAGGAGGTACAGCCGGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGRGAVRRGESS*AAEEEEVQPGD Trigger: GTCGCCCGGCTGTACCTCCTCCTCCTCAGCCGCCAAACTACTCTCCCCACGTCGAACTGCGCCTCGGCCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | CAGGCTTCAAAACCCCTGCCCTACTTGGCCGCCCTCTaGCACCCAACCTCGGCCGAGGCGCAGTTCGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: QASKPLPYLAAL*HPTSAEAQFDV Trigger: CACGTCGAACTGCGCCTCGGCCGAGGTTGGGTGGCAGAGGGCGGCCAAGTAGGGCAGGGGTTTTGAAGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | TCGGCCGAGGCGCAGTTCGACGTGGGGAGAGTAGTTTaGCGGCTGAGGAGGAGGAGGTACAGCCGGGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: SAEAQFDVGRVV*RLRRRRYSRAT Trigger: TGTCGCCCGGCTGTACCTCCTCCTCCTCAGCCGCCAAACTACTCTCCCCACGTCGAACTGCGCCTCGGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | GCACAACCGCGCTGTACTGTGAGTACCGGTCCAGTCTaGGCAGCAGGCGCAGCAGGCGCAGCAGTCGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: AQPRCTVSTGPV*AAGAAGAAVAR Trigger: CCGTGCGACTGCTGCGCCTGCTGCGCCTGCTGCCAAGACTGGACCGGTACTCACAGTACAGCGCGGTTGTGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | AAGGACCAGCCTCAGGCTTCAAAACCCCTGCCCTACTaGGCCGCCCTCTGCCACCCAACCTCGGCCGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: KDQPQASKPLPY*AALCHPTSAEA Trigger: CGCCTCGGCCGAGGTTGGGTGGCAGAGGGCGGCCAAGTAGGGCAGGGGTTTTGAAGCCTGAGGCTGGTCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | GGGTCCACTGGACCGTGCCAGGACCGTGGCAGCCAATaGGCACCATCTCTAGGCTGTGGGGATCCCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSTGPCQDRGSQ*APSLGCGDPRA Trigger: TGCCCTGGGATCCCCACAGCCTAGAGATGGTGCTCATTGGCTGCCACGGTCCTGGCACGGTCCAGTGGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | CGCTGCCTCTGCCGCCACCGCTGCCACTGCTGCTGCTaGTGCTGCTGCAGTTTTCACTCTGGCCAGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RCLCRHRCHCCC*CCCSFHSGQSC Trigger: ACAGCTCTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | CTTCGCTGCCTCTGCCGCCACCGCTGCCACTGCTGCTaGTGCTGCTGCTGCAGTTTTCACTCTGGCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRCLCRHRCHCC*CCCCSFHSGQS Trigger: GCTCTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | TGGCTTCGCTGCCTCTGCCGCCACCGCTGCCACTGCTaGTGCTGCTGCTGCTGCAGTTTTCACTCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WLRCLCRHRCHC*CCCCCSFHSGQ Trigger: CTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | AGGCAGCCACGGCTGGCGGCCTCGAACAGCGGCAGCTaGAGGACTTCCTTGTGCAGGTGCATGGCGATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQPRLAASNSGS*RTSLCRCMAMS Trigger: AGACATCGCCATGCACCTGCACAAGGAAGTCCTGCAGCTGCCGCTGTTCGAGGCCGCCAGCCGTGGCTGCCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | GATGAGCAGAAGGACCAGCCTCAGGCTTCAAAACCCCTGCCCTACTaGGCCGCCCTCTGCCACCCAACCTCGGCCGAGGCGCAGTTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: DEQKDQPQASKPLPY*AALCHPTSAEAQFD Trigger: GTCGAACTGCGCCTCGGCCGAGGTTGGGTGGCAGAGGGCGGCCAAGTAGGGCAGGGGTTTTGAAGCCTGAGGCTGGTCCTTCTGCTCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | GGTAGAGAACTGCCCGGCTCCGCCTCCGATTGGCATTaGAGCCTTTGGATCCGGCCCGACCATATCGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GRELPGSASDWH*SLWIRPDHIGA Trigger: GGCGCCGATATGGTCGGGCCGGATCCAAAGGCTTCAATGCCAATCGGAGGCGGAGCCGGGCAGTTCTCTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | CATTGGCTTCGCTGCCTCTGCCGCCACCGCTGCCACTaGTGCTGCTGCTGCTGCTGCAGTTTTCACTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HWLRCLCRHRCH*CCCCCCSFHSG Trigger: GCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGGCAGCGGTGGCGGCAGAGGCAGCGAAGCCAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | GGCTCATCTGCTGGGGCTGGTGAGACCGTGTGTCCCTaGTCCCCATCTGTCTCCTTCTCCTCCAGTGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GSSAGAGETVCP*SPSVSFSSSVD Trigger: GTCCACACTGGAGGAGAAGGAGACAGATGGGGAGCAGGGACACACGGTCTCACCAGCCCCAGCAGATGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | ACAGCCTGGCGAAGTGACTGCAGTCCCTCCCGCATCTaGAGCACCTGTTCAGACAGCTCCATCACCGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TAWRSDCSPSRI*STCSDSSITAC Trigger: GCAGGCGGTGATGGAGCTGTCTGAACAGGTGCTGCAGATGCGGGAGGGACTGCAGTCACTTCGCCAGGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | GGCACCAGGATGAGCTGCACAGCCTGGCGAAGTGACTaGAGTCCCTCCCGCATCTGCAGCACCTGTTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GTRMSCTAWRSD*SPSRICSTCSD Trigger: GTCTGAACAGGTGCTGCAGATGCGGGAGGGACTGCAGTCACTTCGCCAGGCTGTGCAGCTCATCCTGGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | CTCTCCAGTACTGGTAGCCTCAGCCTGGCTCACAGGTaGTGGGGTCCCAGTCCTAGCCCCTTCCTCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSTGSLSLAHR*WGPSPSPFLRR Trigger: CCTTCTGAGGAAGGGGCTAGGACTGGGACCCCAGCACCTGTGAGCCAGGCTGAGGCTACCAGTACTGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | CTTTCGGATCTGTTGGCGGACCAGCTCACTGGTGTCTaGCCCATAGAGGAAGGAGCAGGCACAGCCCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSDLLADQLTGV*PIEEGAGTAPL Trigger: CAGCGGGGCTGTGCCTGCTCCTTCCTCTATGGGCCAGACACCAGTGAGCTGGTCCGCCAACAGATCCGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | GGGGCTCCGAGTCTGAAGTGGAGGTCCATAAAGCTGTaGCTCGAGGCCAAGGGGAGCTCTGAGATGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAPSLKWRSIKL*LEAKGSSEMLG Trigger: CCCCAGCATCTCAGAGCTCCCCTTGGCCTCGAGCCACAGCTTTATGGACCTCCACTTCAGACTCGGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | TCCAGTACTGGTAGCCTCAGCCTGGCTCACAGGTGCTaGGGTCCCAGTCCTAGCCCCTTCCTCAGAAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSTGSLSLAHRC*GPSPSPFLRRR Trigger: CCTCCTTCTGAGGAAGGGGCTAGGACTGGGACCCCAGCACCTGTGAGCCAGGCTGAGGCTACCAGTACTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | CCTTCTTCCTGGGTCCACTGGACCGTGCCAGGACCGTaGCAGCCAATGAGCACCATCTCTAGGCTGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSSWVHWTVPGP*QPMSTISRLWG Trigger: TCCCCACAGCCTAGAGATGGTGCTCATTGGCTGCCACGGTCCTGGCACGGTCCAGTGGACCCAGGAAGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | CAGCCAGCCGATCTCAGGCAGCTCCGACTCGCTGCTCTCAATCTCTaGCTGGCCGATGTAAAACCAGACGCAGGCCACCCAGTGAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: QPADLRQLRLAALNL*LADVKPDAGHPVSE Trigger: CTCGCTCACTGGGTGGCCTGCGTCTGGTTTTACATCGGCCAGCAAGAGATTGAGAGCAGCGAGTCGGAGCTGCCTGAGATCGGCTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | GACGCAGTATGTCAGCCCCTTCACGTCTGCATTGGCCTTCACTACTaGTTCCCGCTGGGGCAGCTCGCAGCCGATCAGGTCACCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DAVCQPLHVCIGLHY*FPLGQLAADQVTLP Trigger: GGGAAGGGTGACCTGATCGGCTGCGAGCTGCCCCAGCGGGAACAAGTAGTGAAGGCCAATGCAGACGTGAAGGGGCTGACATACTGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | GGGCCTCCTCGGTTCTTGGTCTCGCTGATGTCCTTGTaGGAGACCAGGAAGAGGGCCACCTCCCCCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPPRFLVSLMSL*ETRKRATSPFS Trigger: TGAGAAGGGGGAGGTGGCCCTCTTCCTGGTCTCTCACAAGGACATCAGCGAGACCAAGAACCGAGGAGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | CGCAGCAGGCGCAGCAGTCGCACGGTCTTCAGGAGGTaGGCCCCAACGTACACGTTGACCTTGAAGGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRRSSRTVFRR*APTYTLTLKAC Trigger: ACATGCCTTCAAGGTCAACGTGTACGTTGGGGCTCACCTCCTGAAGACCGTGCGACTGCTGCGCCTGCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | AGCCATGAGCAAGGTGAGCACAACCGCGCTGTACTGTaGGTACCGGTCCAGTCTTGGCAGCAGGCGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHEQGEHNRAVL*VPVQSWQQAQQ Trigger: CTGCTGCGCCTGCTGCCAAGACTGGACCGGTACTCACAGTACAGCGCGGTTGTGCTCACCTTGCTCATGGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | CCTGGGGAGGGGCTGCTGCTACATTCTGGGCCAGACTaGCCCACTCGGAAAGAGAACTTGGGCTGGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGEGLLLHSGPD*PTRKENLGWSE Trigger: CTCTGACCAGCCCAAGTTCTCTTTCCGAGTGGGTCAGTCTGGCCCAGAATGTAGCAGCAGCCCCTCCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | GACACTAGGTGGGCCACGGGCAGCACTGGGTTCCCGTaGTGTGCTCACACACACACTGTATGGCACAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DTRWATGSTGFP*CAHTHTVWHSD Trigger: GTCACTGTGCCATACAGTGTGTGTGTGAGCACAGCACGGGAACCCAGTGCTGCCCGTGGCCCACCTAGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | CTGCAGGACTTCCTTGTGCAGGTGCATGGCGATGTCTaGACGAAGCTCATCCGGGAGGCTCTGCAGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQDFLVQVHGDV*TKLIREALQQL Trigger: GAGCTGCTGCAGAGCCTCCCGGATGAGCTTCGTGCAGACATCGCCATGCACCTGCACAAGGAAGTCCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | CCACTGCTGCTGCTGCTGCTGCTGCAGTTTTCACTCTaGCCAGAGCTGTTCCCTCCATCTGGACTCCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PLLLLLLLQFSL*PELFPPSGLRL Trigger: GAGCCGGAGTCCAGATGGAGGGAACAGCTCTGGCCAGAGTGAAAACTGCAGCAGCAGCAGCAGCAGCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | GTAGCTGAGCTCCCCTCGGAGGCCACGGCTAAAGCGTaGGGCAAACTCAGGGTACAGAGCAAGGCTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: VAELPSEATAKA*GKLRVQSKALM Trigger: CATGAGAGCCTTGCTCTGTACCCTGAGTTTGCCCCACGCTTTAGCCGTGGCCTCCGAGGGGAGCTCAGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | AGAGATCTCCAGAGCCAGGGGGCTCCGAGTCTGAAGTaGAGGTCCATAAAGCTGTGGCTCGAGGCCAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RDLQSQGAPSLK*RSIKLWLEAKG Trigger: CCCCTTGGCCTCGAGCCACAGCTTTATGGACCTCCACTTCAGACTCGGAGCCCCCTGGCTCTGGAGATCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | TGTCAGCCCCTTCACGTCTGCATTGGCCTTCACTACTaGTTCCCGCTGGGGCAGCTCGCAGCCGATCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CQPLHVCIGLHY*FPLGQLAADQV Trigger: GACCTGATCGGCTGCGAGCTGCCCCAGCGGGAACAAGTAGTGAAGGCCAATGCAGACGTGAAGGGGCTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | TGCGGTGGATGCGGATGTAGTCTCGCAGGTCACGAGTaGGGCTGTGGTACAGAAAGCGGCGAGCATACATGC | + |
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Preference number: 6 (lower is better) Translates to: CGGCGCSLAGHE*GCGTESGEHTC Trigger: GCATGTATGCTCGCCGCTTTCTGTACCACAGCCGCACTCGTGACCTGCGAGACTACATCCGCATCCACCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | CGTGGGGCAAACTCAGGGTACAGAGCAAGGCTCTCATaGAGCCCAGCCAACTGCAGACACTGTAGGACGCAG | + |
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Preference number: 6 (lower is better) Translates to: RGANSGYRARLS*SPANCRHCRTQ Trigger: CTGCGTCCTACAGTGTCTGCAGTTGGCTGGGCTGCATGAGAGCCTTGCTCTGTACCCTGAGTTTGCCCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | GCAGTTTTCACTCTGGCCAGAGCTGTTCCCTCCATCTaGACTCCGGCTCACCAGGTAGTAGGGGGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AVFTLARAVPSI*TPAHQVVGGLQ Trigger: CTGGAGACCCCCTACTACCTGGTGAGCCGGAGTCCAGATGGAGGGAACAGCTCTGGCCAGAGTGAAAACTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | TTCACGTCTGCATTGGCCTTCACTACTTGTTCCCGCTaGGGCAGCTCGCAGCCGATCAGGTCACCCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: FTSALAFTTCSR*GSSQPIRSPFP Trigger: AGGGAAGGGTGACCTGATCGGCTGCGAGCTGCCCCAGCGGGAACAAGTAGTGAAGGCCAATGCAGACGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | GTAGGACGCAGTATGTCAGCCCCTTCACGTCTGCATTaGCCTTCACTACTTGTTCCCGCTGGGGCAGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: VGRSMSAPSRLH*PSLLVPAGAAR Trigger: GCGAGCTGCCCCAGCGGGAACAAGTAGTGAAGGCCAATGCAGACGTGAAGGGGCTGACATACTGCGTCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | TGCAGACACTGTAGGACGCAGTATGTCAGCCCCTTCACGTCTGCATaGGCCTTCACTACTTGTTCCCGCTGGGGCAGCTCGCAGCCGATC | + |
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Preference number: 6 (lower is better) Translates to: CRHCRTQYVSPFTSA*AFTTCSRWGSSQPI Trigger: GATCGGCTGCGAGCTGCCCCAGCGGGAACAAGTAGTGAAGGCCAATGCAGACGTGAAGGGGCTGACATACTGCGTCCTACAGTGTCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | TGCTCCCCATCTGTCTCCTTCTCCTCCAGTGTGGACATGAGGGTGTaGTCACCACTCAGGGAGCTGGTATCCACCTCCGCAGAGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: CSPSVSFSSSVDMRV*SPLRELVSTSAETP Trigger: TGGAGTCTCTGCGGAGGTGGATACCAGCTCCCTGAGTGGTGACAACACCCTCATGTCCACACTGGAGGAGAAGGAGACAGATGGGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | CCTGCAGCCAGCCGATCTCAGGCAGCTCCGACTCGCTaGTCTCAATCTCTTGCTGGCCGATGTAAAACCAGA | + |
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Preference number: 6 (lower is better) Translates to: PAASRSQAAPTR*SQSLAGRCKTR Trigger: TCTGGTTTTACATCGGCCAGCAAGAGATTGAGAGCAGCGAGTCGGAGCTGCCTGAGATCGGCTGGCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | GGGTACAGAGCAAGGCTCTCATGCAGCCCAGCCAACTaGAGACACTGTAGGACGCAGTATGTCAGCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GYRARLSCSPAN*RHCRTQYVSPF Trigger: GAAGGGGCTGACATACTGCGTCCTACAGTGTCTGCAGTTGGCTGGGCTGCATGAGAGCCTTGCTCTGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | GATCTCAGGCAGCTCCGACTCGCTGCTCTCAATCTCTaGCTGGCCGATGTAAAACCAGACGCAGGCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: DLRQLRLAALNL*LADVKPDAGHP Trigger: TGGGTGGCCTGCGTCTGGTTTTACATCGGCCAGCAAGAGATTGAGAGCAGCGAGTCGGAGCTGCCTGAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | TGTAGGACGCAGTATGTCAGCCCCTTCACGTCTGCATaGGCCTTCACTACTTGTTCCCGCTGGGGCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: CRTQYVSPFTSA*AFTTCSRWGSS Trigger: CGAGCTGCCCCAGCGGGAACAAGTAGTGAAGGCCAATGCAGACGTGAAGGGGCTGACATACTGCGTCCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | TTGCTTCTGCAGATGGCCAGAGAGGTGGTAGAGAACTaGCCGGCTCCGCCTCCGATTGGCATTGAAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLLQMAREVVEN*PAPPPIGIEAF Trigger: AAAGGCTTCAATGCCAATCGGAGGCGGAGCCGGGCAGTTCTCTACCACCTCTCTGGCCATCTGCAGAAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | CACAGCCCAGGTGGCTTGGAAGTACTCCAGCATTCGTaGTTTGAGGGGTTTGGGGATGCGGTGGATGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: HSPGGLEVLQHS*FEGFGDAVDAD Trigger: ATCCGCATCCACCGCATCCCCAAACCCCTCAAACAACGAATGCTGGAGTACTTCCAAGCCACCTGGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | ACCTGTTCAGACAGCTCCATCACCGCCTGCCGTAGCTaGTCCAGCGTGTCTGTGTTTCTTGCTTCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TCSDSSITACRS*SSVSVFLASLG Trigger: GCCCAGTGAAGCAAGAAACACAGACACGCTGGACAAGCTACGGCAGGCGGTGATGGAGCTGTCTGAACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | GCCATTGTTCACAGCCCAGGTGGCTTGGAAGTACTCCAGCATTCGTaGTTTGAGGGGTTTGGGGATGCGGTGGATGCGGATGTAGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: AIVHSPGGLEVLQHS*FEGFGDAVDADVVS Trigger: CGAGACTACATCCGCATCCACCGCATCCCCAAACCCCTCAAACAACGAATGCTGGAGTACTTCCAAGCCACCTGGGCTGTGAACAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | CCCAGGTGGCTTGGAAGTACTCCAGCATTCGTTGTTTaGGGGGTTTGGGGATGCGGTGGATGCGGATGTAGT | + |
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Preference number: 6 (lower is better) Translates to: PRWLGSTPAFVV*GVWGCGGCGCS Trigger: ACTACATCCGCATCCACCGCATCCCCAAACCCCTCAAACAACGAATGCTGGAGTACTTCCAAGCCACCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | CACCCTTCCCTAGAATGGCGAGCACGGTGCCACCTTTaGGGACCTCCATGGAACCCGAGCAGACAAAATAGA | + |
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Preference number: 6 (lower is better) Translates to: HPSLEWRARCHL*GPPWNPSRQNR Trigger: TCTATTTTGTCTGCTCGGGTTCCATGGAGGTCCTCAAAGGTGGCACCGTGCTCGCCATTCTAGGGAAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | CTTCTCTCCAAACACTCCCTTATTGAGCTTGTGCTTGCCCTTGGGTaGCTTCTGCAGATGGCCAGAGAGGTGGTAGAGAACTGCCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLSKHSLIELVLALG*LLQMAREVVENCPA Trigger: AGCCGGGCAGTTCTCTACCACCTCTCTGGCCATCTGCAGAAGCAACCCAAGGGCAAGCACAAGCTCAATAAGGGAGTGTTTGGAGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | GGCTTCTCTCCAAACACTCCCTTATTGAGCTTGTGCTaGCCCTTGGGTTGCTTCTGCAGATGGCCAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GFSPNTPLLSLC*PLGCFCRWPER Trigger: CCTCTCTGGCCATCTGCAGAAGCAACCCAAGGGCAAGCACAAGCTCAATAAGGGAGTGTTTGGAGAGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | GGAAGCCCACTCTTCCGGTACAGGATCAGTTCAGCCTTGAATTCTTaGTGCTCATCTAGGGCCTTTCGGATCTGTTGGCGGACCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSPLFRYRISSALNS*CSSRAFRICWRTSS Trigger: TGAGCTGGTCCGCCAACAGATCCGAAAGGCCCTAGATGAGCACAAAGAATTCAAGGCTGAACTGATCCTGTACCGGAAGAGTGGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | CACCAGAATGGAAGCCCACTCTTCCGGTACAGGATCAGTTCAGCCTaGAATTCTTTGTGCTCATCTAGGGCCTTTCGGATCTGTTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: HQNGSPLFRYRISSA*NSLCSSRAFRICWR Trigger: CCGCCAACAGATCCGAAAGGCCCTAGATGAGCACAAAGAATTCAAGGCTGAACTGATCCTGTACCGGAAGAGTGGGCTTCCATTCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS GCA 72 bp | TTTGGCTTCTCTCCAAACACTCCCTTATTGAGCTTGTaGTTGCCCTTGGGTTGCTTCTGCAGATGGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: FGFSPNTPLLSL*LPLGCFCRWPE Trigger: CTCTGGCCATCTGCAGAAGCAACCCAAGGGCAAGCACAAGCTCAATAAGGGAGTGTTTGGAGAGAAGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CCA 72 bp | GTGGTATCGATGCCATTGTTCACAGCCCAGGTGGCTTaGAAGTACTCCAGCATTCGTTGTTTGAGGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VVSMPLFTAQVA*KYSSIRCLRGL Trigger: CAAACCCCTCAAACAACGAATGCTGGAGTACTTCCAAGCCACCTGGGCTGTGAACAATGGCATCGATACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | GGAAGCCCACTCTTCCGGTACAGGATCAGTTCAGCCTaGAATTCTTTGTGCTCATCTAGGGCCTTTCGGATC | + |
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Preference number: 6 (lower is better) Translates to: GSPLFRYRISSA*NSLCSSRAFRI Trigger: GATCCGAAAGGCCCTAGATGAGCACAAAGAATTCAAGGCTGAACTGATCCTGTACCGGAAGAGTGGGCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | AAACACTCCCTTATTGAGCTTGTGCTTGCCCTTGGGTaGCTTCTGCAGATGGCCAGAGAGGTGGTAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: KHSLIELVLALG*LLQMAREVVEN Trigger: GTTCTCTACCACCTCTCTGGCCATCTGCAGAAGCAACCCAAGGGCAAGCACAAGCTCAATAAGGGAGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 90 bp | TATTCAGGCAAATTTGGCTTCTCTCCAAACACTCCCTTATTGAGCTaGTGCTTGCCCTTGGGTTGCTTCTGCAGATGGCCAGAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: YSGKFGFSPNTPLLS*CLPLGCFCRWPERW Trigger: CCACCTCTCTGGCCATCTGCAGAAGCAACCCAAGGGCAAGCACAAGCTCAATAAGGGAGTGTTTGGAGAGAAGCCAAATTTGCCTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | AGTGGTATCGATGCCATTGTTCACAGCCCAGGTGGCTaGGAAGTACTCCAGCATTCGTTGTTTGAGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SGIDAIVHSPGG*EVLQHSLFEGF Trigger: AAACCCCTCAAACAACGAATGCTGGAGTACTTCCAAGCCACCTGGGCTGTGAACAATGGCATCGATACCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | TCAGGCAAATTTGGCTTCTCTCCAAACACTCCCTTATaGAGCTTGTGCTTGCCCTTGGGTTGCTTCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGKFGFSPNTPL*SLCLPLGCFCR Trigger: TCTGCAGAAGCAACCCAAGGGCAAGCACAAGCTCAATAAGGGAGTGTTTGGAGAGAAGCCAAATTTGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS TCA 72 bp | GAGGCAAATGGACTTTGGGGCAAATACCACCTGGCCTaGCTTGGACACAAATGTAGTACGAAAATTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: EANGLWGKYHLA*LGHKCSTKIQH Trigger: GTGCTGAATTTTCGTACTACATTTGTGTCCAAGTCAGGCCAGGTGGTATTTGCCCCAAAGTCCATTTGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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| CDS CAA 72 bp | CAAATGGACTTTGGGGCAAATACCACCTGGCCTGACTaGGACACAAATGTAGTACGAAAATTCAGCACAATA | + |
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Preference number: 6 (lower is better) Translates to: QMDFGANTTWPD*DTNVVRKFSTI Trigger: TATTGTGCTGAATTTTCGTACTACATTTGTGTCCAAGTCAGGCCAGGTGGTATTTGCCCCAAAGTCCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041415.5 |
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