Pregenerated sensors for KCNG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045246Ensembl transcript IDs: ENSMUST00000061828.10, ENSMUST00000164382.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCCAGGAGCACTGATCCAGTATGGCAAGATGGGCAGTGCCCAGTaGCTGGCAGGGAGCTGGGGAAGGAATAGGGATGGGCCCAGGATT | + |
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Preference number: 1 (lower is better) Translates to: IPGALIQYGKMGSAQ*LAGSWGRNRDGPRI Trigger: AATCCTGGGCCCATCCCTATTCCTTCCCCAGCTCCCTGCCAGTCACTGGGCACTGCCCATCTTGCCATACTGGATCAGTGCTCCTGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR TCA 90 bp | GCGATCTGCCTCTCTGTGGATCCCAGGGCTGAGTCTATGCACAGATaGGCCCATGGATATGTGGACACAGAGACAGCAGGGATGCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: AICLSVDPRAESMHR*AHGYVDTETAGMPV Trigger: GACAGGCATCCCTGCTGTCTCTGTGTCCACATATCCATGGGCTCATCTGTGCATAGACTCAGCCCTGGGATCCACAGAGAGGCAGATCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 90 bp | AGTCAGTATTCTGAGCTCACATGCCCAGGTGGTCCATTGGAGAGATaGAGGAGCCCGTCTCAGCCATGGGATGGGTTGAAGCTATGGCAC | + |
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Preference number: 1 (lower is better) Translates to: SQYSELTCPGGPLER*RSPSQPWDGLKLWH Trigger: GTGCCATAGCTTCAACCCATCCCATGGCTGAGACGGGCTCCTGCATCTCTCCAATGGACCACCTGGGCATGTGAGCTCAGAATACTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 90 bp | GTGGTGTGGCCCAGGACAGGGGGTCTGAGGGAGAAGGTGGAAATCTaGAGACTCCGTATTTGGCTCTTAGTGGAAGTCAGTTCTGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: VVWPRTGGLREKVEI*RLRIWLLVEVSSVS Trigger: GCTCACAGAACTGACTTCCACTAAGAGCCAAATACGGAGTCTGCAGATTTCCACCTTCTCCCTCAGACCCCCTGTCCTGGGCCACACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 90 bp | GAGTTTGCAAAGAAGGGAAAAGATCCCAGGAGCACTGATCCAGTATaGCAAGATGGGCAGTGCCCAGTGACTGGCAGGGAGCTGGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: EFAKKGKDPRSTDPV*QDGQCPVTGRELGK Trigger: CTTCCCCAGCTCCCTGCCAGTCACTGGGCACTGCCCATCTTGCCATACTGGATCAGTGCTCCTGGGATCTTTTCCCTTCTTTGCAAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 90 bp | ACAGGGGGTCTGAGGGAGAAGGTGGAAATCTGCAGACTCCGTATTTaGCTCTTAGTGGAAGTCAGTTCTGTGAGCATCCAGAGCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: TGGLREKVEICRLRI*LLVEVSSVSIQSPG Trigger: CCCTGGGCTCTGGATGCTCACAGAACTGACTTCCACTAAGAGCCAAATACGGAGTCTGCAGATTTCCACCTTCTCCCTCAGACCCCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 90 bp | GGCAGAGCCCTTGGCCATGTGGTGACAGTCAGGAAAGTAGGGGCGTaGCATGAAGCAGGGCTCAGCTTAATACTAGTGGAAAGACCAATG | + |
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Preference number: 1 (lower is better) Translates to: GRALGHVVTVRKVGA*HEAGLSLILVERPM Trigger: CATTGGTCTTTCCACTAGTATTAAGCTGAGCCCTGCTTCATGCCACGCCCCTACTTTCCTGACTGTCACCACATGGCCAAGGGCTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR TCA 90 bp | GTCTCTGTAAGGCATAGCGATCTGCCTCTCTGTGGATCCCAGGGCTaGGTCTATGCACAGATGAGCCCATGGATATGTGGACACAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: VSVRHSDLPLCGSQG*VYAQMSPWICGHRD Trigger: GTCTCTGTGTCCACATATCCATGGGCTCATCTGTGCATAGACTCAGCCCTGGGATCCACAGAGAGGCAGATCGCTATGCCTTACAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR TCA 90 bp | TGGCCTCACAGCCAATACCAAATGACAGCAGAACTGTGTAACTCCTaGGAAATGGCACAGAGATCTCTCACAGGTGTGCTGGGCCAGACT | + |
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Preference number: 1 (lower is better) Translates to: WPHSQYQMTAELCNS*EMAQRSLTGVLGQT Trigger: AGTCTGGCCCAGCACACCTGTGAGAGATCTCTGTGCCATTTCTCAGGAGTTACACAGTTCTGCTGTCATTTGGTATTGGCTGTGAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR TCA 90 bp | AAGACCAATGTGTTAGCAGGGCGCAGTACTGACTGTATCCACACATaGACCATGTCAGATTCACAGGGTCCTGTCTATCTCCCTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: KTNVLAGRSTDCIHT*TMSDSQGPVYLPVT Trigger: GGTGACAGGGAGATAGACAGGACCCTGTGAATCTGACATGGTTCATGTGTGGATACAGTCAGTACTGCGCCCTGCTAACACATTGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 90 bp | TGGCTCTTAGTGGAAGTCAGTTCTGTGAGCATCCAGAGCCCAGGGTaGAATAGCATAGAGTTTGCAAAGAAGGGAAAAGATCCCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: WLLVEVSSVSIQSPG*NSIEFAKKGKDPRS Trigger: GCTCCTGGGATCTTTTCCCTTCTTTGCAAACTCTATGCTATTCCACCCTGGGCTCTGGATGCTCACAGAACTGACTTCCACTAAGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGGACACAGAGACAGCAGGGATGCCTGTCCTCCATCAGTGTGGGTCACGAGCTGGCAAGATGGGCAGTaGCCAGTGACTGGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: CGHRDSRDACPPSVWVTSWQDGQ*PVTGRE Trigger: CTCCCTGCCAGTCACTGGGCACTGCCCATCTTGCCA...GCTCGTGACCCACACTGATGGAGGACAGGCATCCCTGCTGTCTCTGTGTCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGGACACAGAGACAGCAGGGATGCCTGTCCTCCATCAGTGTGGGTCACGAGCGGTCCATTGGAGAGATaGAGGAGCCCGTCTCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: CGHRDSRDACPPSVWVTSGPLER*RSPSQP Trigger: TGGCTGAGACGGGCTCCTGCATCTCTCCAATGGACC...GCTCGTGACCCACACTGATGGAGGACAGGCATCCCTGCTGTCTCTGTGTCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CAA 90 bp | CTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCTaGATGTCTAGAGGGATAGGAGCATGTGTGTGCATCTGTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LETCELERAEGAPHT*MSRGIGACVCICLG Trigger: CCCCAAACAGATGCACACACATGCTCCTATCCCTCTAGACATCAAGGTGTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CAA 90 bp | GACAGGGGGTCTGAGGGAGAAGGTGGAAATCTGCAGACTCCGTATTaGGCTCTTAGTGGAAGTCAGTTCTGTGAGCATCCAGAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: DRGSEGEGGNLQTPY*ALSGSQFCEHPEPR Trigger: CCTGGGCTCTGGATGCTCACAGAACTGACTTCCACTAAGAGCCAAATACGGAGTCTGCAGATTTCCACCTTCTCCCTCAGACCCCCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAGGGCTGAGTCTATGCACAGATGAGCCCATGGATATGTGGACACAGAGACCAGGACAGGGGGTCTaGGGGAGAAGGTGGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: IPGLSLCTDEPMDMWTQRPGQGV*GRRWKS Trigger: AGATTTCCACCTTCTCCCTCAGACCCCCTGTCCTGG...TCTCTGTGTCCACATATCCATGGGCTCATCTGTGCATAGACTCAGCCCTGGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCAGAGCCCTTGGCCATGTGGTGACAGTCAGGAAAGTAGGGGCGTGGCATACCTGGCACCTTTCCTaGTTTGGAAGTAAGTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LGRALGHVVTVRKVGAWHTWHLS*FGSKSV Trigger: TACTGACTTACTTCCAAAGCAGGAAAGGTGCCAGGT...ATGCCACGCCCCTACTTTCCTGACTGTCACCACATGGCCAAGGGCTCTGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR GCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAATGTCACCCCTACTTCTaGTCGGTCTCACGGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQCHPYF*SVSRPL Trigger: AAGGGGCCGTGAGACCGAGCAGAAGTAGGGGTGACA...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGAGGGTGCTCCCCACACCTTGATGTCTAGAGGGATAGGAGCATGTGTGGTCTCAGCCATGGGATaGGTTGAAGCTATGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: RAEGAPHTLMSRGIGACVVSAMG*VEAMAH Trigger: ATGTGCCATAGCTTCAACCCATCCCATGGCTGAGAC...CACACATGCTCCTATCCCTCTAGACATCAAGGTGTGGGGAGCACCCTCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGGACACAGAGACAGCAGGGATGCCTGTCCTCCATCAGTGTGGGTCACGAGCATCCAGAGCCCAGGGTaGAATAGCATAGAGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: CGHRDSRDACPPSVWVTSIQSPG*NSIEFA Trigger: TGCAAACTCTATGCTATTCCACCCTGGGCTCTGGAT...GCTCGTGACCCACACTGATGGAGGACAGGCATCCCTGCTGTCTCTGTGTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CAA 90 bp | TTGGAAGTAAGTCAGTATTCTGAGCTCACATGCCCAGGTGGTCCATaGGAGAGATGCAGGAGCCCGTCTCAGCCATGGGATGGGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: LEVSQYSELTCPGGP*ERCRSPSQPWDGLK Trigger: CTTCAACCCATCCCATGGCTGAGACGGGCTCCTGCATCTCTCCAATGGACCACCTGGGCATGTGAGCTCAGAATACTGACTTACTTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR TCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAATGGAAGTCAGTTCTGTaGGCATCCAGAGCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQWKSVL*ASRAQG Trigger: ACCCTGGGCTCTGGATGCTCACAGAACTGACTTCCA...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTGGAGGAACATTACGCAGTTCTCAGAGTCCCCTTGTCAAGGCTAAGAGCGTAGGCTTGCAGCCATaGGAACCTGACAGGATTTGC | + |
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Preference number: 2 (lower is better) Translates to: PPGGTLRSSQSPLVKAKSVGLQP*EPDRIC Trigger: GCAAATCCTGTCAGGTTCTCATGGCTGCAAGCCTAC...GCTCTTAGCCTTGACAAGGGGACTCTGAGAACTGCGTAATGTTCCTCCAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR GCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAAGATCTCTCACAGGTGTaGTGGGCCAGACTGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQDLSQV*WARLVV Trigger: CACTACCAGTCTGGCCCAGCACACCTGTGAGAGATC...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGGACACAGAGACAGCAGGGATGCCTGTCCTCCATCAGTGTGGGTCACGAGCAATGATGTCATGACCTaGCACCTTTCCTGCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: CGHRDSRDACPPSVWVTSNDVMT*HLSCFG Trigger: TCCAAAGCAGGAAAGGTGCCAGGTCATGACATCATT...GCTCGTGACCCACACTGATGGAGGACAGGCATCCCTGCTGTCTCTGTGTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTGATGGGTTGAAGCTATaGCACATACTTAAGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: QDCASLFLEQSIMPGASADGLKL*HILKVV Trigger: CACCACCTTAAGTATGTGCCATAGCTTCAACCCATC...AGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR CCA 90 bp | CAAAGAAGGGAAAAGATCCCAGGAGCACTGATCCAGTATGGCAAGATGGGCAGTAGCCCGTCTCAGCCATaGGATGGGTTGAAGCTATGG | + |
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Preference number: 2 (lower is better) Translates to: QRREKIPGALIQYGKMGSSPSQP*DGLKLW Trigger: CCATAGCTTCAACCCATCCCATGGCTGAGACGGGCT...ACTGCCCATCTTGCCATACTGGATCAGTGCTCCTGGGATCTTTTCCCTTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR TCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAAAGTAAGTCAGTATTCTaGGCTCACATGCCCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQSKSVF*AHMPRW Trigger: CCACCTGGGCATGTGAGCTCAGAATACTGACTTACT...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR GCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAACTCTGGGGCACCGGCTaGTCAGAAGTCACTTTATTT | + |
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Preference number: 2 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQLWGTG*SEVTLF Trigger: AAATAAAGTGACTTCTGAGCAGCCGGTGCCCCAGAG...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CAA 90 bp | AACCATGTCAGATTCACAGGGTCCTGTCTATCTCCCTGTCACCCCTaGTACTTTCTCCAGTGGCCTCACAGCCAATACCAAATGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: NHVRFTGSCLSPCHP*YFLQWPHSQYQMTA Trigger: TGCTGTCATTTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAGACAGGACCCTGTGAATCTGACATGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR CCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAATGCTTCCATGGCATTTaGCAATATGGTTGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQCFHGI*QYGWWW Trigger: CCACCACCAACCATATTGCCAAATGCCATGGAAGCA...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 72 bp | CCGTGCTCTGAGGTCCACCAGCTCCCGATCCTAGCCTaGCCTACTGCTCTGCACCCCAACCCCGCAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: PCSEVHQLPILA*PTALHPNPARD Trigger: GTCCCTTGCGGGGTTGGGGTGCAGAGCAGTAGGGCAGGCTAGGATCGGGAGCTGGTGGACCTCAGAGCACGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 72 bp | ACCCAGAGTCCAGCTGGCCAACTGGGTACTTGCAGGTaGCCCTCCTGCCCAGGTAGGTCCCCAGGCGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: TQSPAGQLGTCR*PSCPGRSPGVL Trigger: CAACACGCCTGGGGACCTACCTGGGCAGGAGGGCCACCTGCAAGTACCCAGTTGGCCAGCTGGACTCTGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 72 bp | CACAGGTCACTCCTGGATGGTTGTCACCCCTACTTCTaGTCGGTCTCACGGCCCCTTGGACTGTCAACCTCG | + |
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Preference number: 3 (lower is better) Translates to: HRSLLDGCHPYF*SVSRPLGLSTS Trigger: CGAGGTTGACAGTCCAAGGGGCCGTGAGACCGAGCAGAAGTAGGGGTGACAACCATCCAGGAGTGACCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR CAA 90 bp | CTGGGCAGAGCCCTTGGCCATGTGGTGACAGTCAGGAAAGTAGGGGCGTGGCATGTCACTCCTGGATGGTaGTCACCCCTACTTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: LGRALGHVVTVRKVGAWHVTPGW*SPLLLL Trigger: GAGCAGAAGTAGGGGTGACAACCATCCAGGAGTGAC...ATGCCACGCCCCTACTTTCCTGACTGTCACCACATGGCCAAGGGCTCTGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 72 bp | TCTGAGCTCACATGCCCAGGTGGTCCATTGGAGAGATaGAGGAGCCCGTCTCAGCCATGGGATGGGTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: SELTCPGGPLER*RSPSQPWDGLK Trigger: CTTCAACCCATCCCATGGCTGAGACGGGCTCCTGCATCTCTCCAATGGACCACCTGGGCATGTGAGCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 72 bp | GGTTGGTGGTGGAAGGCAGTAAAAGAACACAAGATCTaGCCGGAAGCCTCTCAGGCTGCGCGGAGCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GWWWKAVKEHKI*PEASQAARSSE Trigger: CTCAGAGCTCCGCGCAGCCTGAGAGGCTTCCGGGCAGATCTTGTGTTCTTTTACTGCCTTCCACCACCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 72 bp | GTCAGTATTCTGAGCTCACATGCCCAGGTGGTCCATTaGAGAGATGCAGGAGCCCGTCTCAGCCATGGGATG | + |
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Preference number: 3 (lower is better) Translates to: VSILSSHAQVVH*RDAGARLSHGM Trigger: CATCCCATGGCTGAGACGGGCTCCTGCATCTCTCCAATGGACCACCTGGGCATGTGAGCTCAGAATACTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR TCA 72 bp | GGGGAAGGAATAGGGATGGGCCCAGGATTGCGCCAATaGTGTCATGACCTGGCACCTTTCCTGCTTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GEGIGMGPGLRQ*CHDLAPFLLWK Trigger: CTTCCAAAGCAGGAAAGGTGCCAGGTCATGACATCATTGGCGCAATCCTGGGCCCATCCCTATTCCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 72 bp | AAGAAGGGAAAAGATCCCAGGAGCACTGATCCAGTATaGCAAGATGGGCAGTGCCCAGTGACTGGCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KKGKDPRSTDPV*QDGQCPVTGRE Trigger: CTCCCTGCCAGTCACTGGGCACTGCCCATCTTGCCATACTGGATCAGTGCTCCTGGGATCTTTTCCCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR TCA 72 bp | AGGCATAGCGATCTGCCTCTCTGTGGATCCCAGGGCTaGGTCTATGCACAGATGAGCCCATGGATATGTGGA | + |
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Preference number: 3 (lower is better) Translates to: RHSDLPLCGSQG*VYAQMSPWICG Trigger: TCCACATATCCATGGGCTCATCTGTGCATAGACTCAGCCCTGGGATCCACAGAGAGGCAGATCGCTATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 72 bp | CCCAGGACAGGGGGTCTGAGGGAGAAGGTGGAAATCTaGAGACTCCGTATTTGGCTCTTAGTGGAAGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: PRTGGLREKVEI*RLRIWLLVEVS Trigger: ACTGACTTCCACTAAGAGCCAAATACGGAGTCTGCAGATTTCCACCTTCTCCCTCAGACCCCCTGTCCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 72 bp | CGATCTGCCTCTCTGTGGATCCCAGGGCTGAGTCTATaGACAGATGAGCCCATGGATATGTGGACACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: RSASLWIPGLSL*TDEPMDMWTQR Trigger: TCTCTGTGTCCACATATCCATGGGCTCATCTGTGCATAGACTCAGCCCTGGGATCCACAGAGAGGCAGATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR GCA 72 bp | AGCCCCCATTGTCTTGGGAAACTCTGGGGCACCGGCTaGTCAGAAGTCACTTTATTTCAGGTTCGTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SPHCLGKLWGTG*SEVTLFQVRLC Trigger: ACAGAGACGAACCTGAAATAAAGTGACTTCTGAGCAGCCGGTGCCCCAGAGTTTCCCAAGACAATGGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 72 bp | CTTGGCCATGTGGTGACAGTCAGGAAAGTAGGGGCGTaGCATGAAGCAGGGCTCAGCTTAATACTAGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: LGHVVTVRKVGA*HEAGLSLILVE Trigger: TTCCACTAGTATTAAGCTGAGCCCTGCTTCATGCCACGCCCCTACTTTCCTGACTGTCACCACATGGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR-3UTR CAA 90 bp | GACAGGGGGTCTGAGGGAGAAGGTGGAAATCTGCAGACTCCGTATTTGGCTCTTCAGCCATGGGATGGGTaGAAGCTATGGCACATACTT | + |
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Preference number: 3 (lower is better) Translates to: DRGSEGEGGNLQTPYLALQPWDG*KLWHIL Trigger: AAGTATGTGCCATAGCTTCAACCCATCCCATGGCTG...AAGAGCCAAATACGGAGTCTGCAGATTTCCACCTTCTCCCTCAGACCCCCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR TCA 72 bp | AGAGTTTGCAAAGAAGGGAAAAGATCCCAGGAGCACTaGTCCAGTATGGCAAGATGGGCAGTGCCCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: RVCKEGKRSQEH*SSMARWAVPSD Trigger: GTCACTGGGCACTGCCCATCTTGCCATACTGGATCAGTGCTCCTGGGATCTTTTCCCTTCTTTGCAAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CCA 72 bp | GGATGGGCCCAGGATTGCGCCAATGATGTCATGACCTaGCACCTTTCCTGCTTTGGAAGTAAGTCAGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: GWAQDCANDVMT*HLSCFGSKSVF Trigger: GAATACTGACTTACTTCCAAAGCAGGAAAGGTGCCAGGTCATGACATCATTGGCGCAATCCTGGGCCCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGGGGTCTGAGGGAGAAGGTGGAAATCTGCAGACTCCGTATTTGGCTCTTGGCACCTTTCCTGCTTaGGAAGTAAGTCAGTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: DRGSEGEGGNLQTPYLALGTFPA*EVSQYS Trigger: AGAATACTGACTTACTTCCAAAGCAGGAAAGGTGCC...AAGAGCCAAATACGGAGTCTGCAGATTTCCACCTTCTCCCTCAGACCCCCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR TCA 72 bp | TGGCACCTTTCCTGCTTTGGAAGTAAGTCAGTATTCTaGGCTCACATGCCCAGGTGGTCCATTGGAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: WHLSCFGSKSVF*AHMPRWSIGEM Trigger: CATCTCTCCAATGGACCACCTGGGCATGTGAGCTCAGAATACTGACTTACTTCCAAAGCAGGAAAGGTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTCCTGGAGGAACATTACGCAGTTCTCAGAGTCCCCTTGTCAAGGCTAAGCATTTGGCAATATGGTaGGTGGTGGAAGGCAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VPPGGTLRSSQSPLVKAKHLAIW*VVEGSK Trigger: TTTACTGCCTTCCACCACCAACCATATTGCCAAATG...CTTAGCCTTGACAAGGGGACTCTGAGAACTGCGTAATGTTCCTCCAGGAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR CCA 72 bp | AGTACGTGCTTCCATGGCATTTGGCAATATGGTTGGTaGTGGAAGGCAGTAAAAGAACACAAGATCTGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: STCFHGIWQYGW*WKAVKEHKICP Trigger: CGGGCAGATCTTGTGTTCTTTTACTGCCTTCCACCACCAACCATATTGCCAAATGCCATGGAAGCACGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR TCA 72 bp | AGCCAATACCAAATGACAGCAGAACTGTGTAACTCCTaGGAAATGGCACAGAGATCTCTCACAGGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQYQMTAELCNS*EMAQRSLTGVL Trigger: CAGCACACCTGTGAGAGATCTCTGTGCCATTTCTCAGGAGTTACACAGTTCTGCTGTCATTTGGTATTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR TCA 72 bp | TGTACTTTCTCCAGTGGCCTCACAGCCAATACCAAATaGCAGCAGAACTGTGTAACTCCTGAGAAATGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CTFSSGLTANTK*QQNCVTPEKWH Trigger: GTGCCATTTCTCAGGAGTTACACAGTTCTGCTGTCATTTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR CCA 72 bp | AACAGTACGTGCTTCCATGGCATTTGGCAATATGGTTaGTGGTGGAAGGCAGTAAAAGAACACAAGATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NSTCFHGIWQYG*WWKAVKEHKIC Trigger: GCAGATCTTGTGTTCTTTTACTGCCTTCCACCACCAACCATATTGCCAAATGCCATGGAAGCACGTACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR CCA 72 bp | CTAGAACAGTACGTGCTTCCATGGCATTTGGCAATATaGTTGGTGGTGGAAGGCAGTAAAAGAACACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LEQYVLPWHLAI*LVVEGSKRTQD Trigger: ATCTTGTGTTCTTTTACTGCCTTCCACCACCAACCATATTGCCAAATGCCATGGAAGCACGTACTGTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCTTGCAGGCCTGGCGCTGCTaGTGGCGCTGGGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLETCELERAEGAPHTLQAWRC*WRWAAS Trigger: GGAGGCTGCCCAGCGCCAGCAGCAGCGCCAGGCCTG...CAAGGTGTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACGCCTGGCGCTGCTGCTaGCGCTGGGCAGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKGLLETCELERAEGAPHAWRCC*RWAASS Trigger: GGAGGAGGCTGCCCAGCGCCAGCAGCAGCGCCAGGC...GTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTTTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | CAGGACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTTGGCAGGCCTGGCGCTaGTGCTGGCGCTGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDCASLFLEQSIMPGASAWQAWR*CWRWAA Trigger: GGCTGCCCAGCGCCAGCAGCAGCGCCAGGCCTGCCA...AGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCCATCGCAGAGCTGCGTaGTCTCCTCATGGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLETCELERAEGAPHTHRRAA*SPHGCG Trigger: GCCGCAGCCATGAGGAGATCACGCAGCTCTGCGATG...GGTGTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCGGAAGGCATCCAGGGTaGTCCAGGGCAGCAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLETCELERAEGAPHTGRHPG*SRAAGT Trigger: GGTACCTGCTGCCCTGGAGCACCCTGGATGCCTTCC...GGTGTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | GACATAAAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCGTGAGGCCCAGCGTCTaGAGCCCCAGGGAGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: DIKGLLETCELERAEGAPVRPSV*SPREWR Trigger: TCGCCACTCCCTGGGGCTGCAGACGCTGGGCCTCAC...GGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTTTATGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTCTCCGGGCCCGGCCAGAGCTaGCTCAAGGGGCTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLAYSWSKASCQGPQLSGPGQS*LKGLQE Trigger: CTCCTGCAGCCCCTTGAGCCAGCTCTGGCCGGGCCC...GGAGAGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTCTCCGCCTGCACCTCGGAGTaGCAGGCCTGGCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLAYSWSKASCQGPQLSACTSE*QAWRCC Trigger: GCAGCAGCGCCAGGCCTGCCACTCCGAGGTGCAGGC...GGAGAGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCTTGTGCTCACACACAGGCTaGCAGCCGTGGTTGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: GLLETCELERAEGAPHTLCSHTG*QPWLPR Trigger: TCGTGGCAACCACGGCTGTCAGCCTGTGTGTGAGCA...CAAGGTGTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCTTGGCTTCTTCAGCAGCTTaGGCAGGCAGCAGCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLETCELERAEGAPHTLASSAA*AGSSAP Trigger: TGGAGCGCTGCTGCCTGCGCAAGCTGCTGAAGAAGC...CAAGGTGTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCAGGAGCCCGTCTCAGCCATGGGATGGGTTGAAGCTATGGCACATACTTGCCTGGCGCTGCTGCTaGCGCTGGGCAGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCRSPSQPWDGLKLWHILAWRCC*RWAASS Trigger: GGAGGAGGCTGCCCAGCGCCAGCAGCAGCGCCAGGC...AAGTATGTGCCATAGCTTCAACCCATCCCATGGCTGAGACGGGCTCCTGCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAACAGGCCTGGCGCTGCTaGTGGCGCTGGGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQQAWRC*WRWAAS Trigger: GGAGGCTGCCCAGCGCCAGCAGCAGCGCCAGGCCTG...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGGGCTGAGTCTATGCACAGATGAGCCCATGGATATGTGGACACAGAGATGGCAGGCCTGGCGCTaGTGCTGGCGCTGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPGLSLCTDEPMDMWTQRWQAWR*CWRWAA Trigger: GGCTGCCCAGCGCCAGCAGCAGCGCCAGGCCTGCCA...TCTCTGTGTCCACATATCCATGGGCTCATCTGTGCATAGACTCAGCCCTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | CAGGACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTGCCCATCGTGAAGCCTaGACCTCGGAGTGGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDCASLFLEQSIMPGASAAHREA*TSEWQA Trigger: GGCCTGCCACTCCGAGGTGCAGGCTTCACGATGGGC...AGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTCTCCGCTCGGCCTCTCGCCTaGCTCCGGGGATTCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVLAYSWSKASCQGPQLSARPLA*LRGFVR Trigger: TCTGACGAATCCCCGGAGGCAGGCGAGAGGCCGAGC...GGAGAGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGAGGGTGCTCCCCACACCTTGATGTCTAGAGGGATAGGAGCATGTGTGCCAGGTAGGAGCTGCTaGTCGGCCTCTCGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAEGAPHTLMSRGIGACVPGRSC*SASRLP Trigger: AGGCAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGG...CACACATGCTCCTATCCCTCTAGACATCAAGGTGTGGGGAGCACCCTCAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | GACATAAAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCTCTCCAGGTAGGAGCTaGTGCTCGGCCTCTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DIKGLLETCELERAEGAPSPGRS*CSASRL Trigger: CAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGGAGA...GGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTTTATGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTCTCCTAGTGAGGCCCAGCGTCTaGAGCCCCAGGGAGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CASLFLEQSIMPGASALLVRPSV*SPREWR Trigger: TCGCCACTCCCTGGGGCTGCAGACGCTGGGCCTCAC...TAGGAGAGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR TCA 90 bp | GACATAAAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCTGCTCACACACAGGCTaGCAGCCGTGGTTGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: DIKGLLETCELERAEGAPCSHTG*QPWLPR Trigger: TCGTGGCAACCACGGCTGTCAGCCTGTGTGTGAGCA...GGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTTTATGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGAGGGTGCTCCCCACACCTTGATGTCTAGAGGGATAGGAGCATGTGTGTGCCCTCCTCAGCCCTaGAGTCGGGCATGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RAEGAPHTLMSRGIGACVCPPQP*SRAWCS Trigger: TGAGCACCATGCCCGACTTCAGGGCTGAGGAGGGCA...CACACATGCTCCTATCCCTCTAGACATCAAGGTGTGGGGAGCACCCTCAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAGAGCCCTTGGCCATGTGGTGACAGTCAGGAAAGTAGGGGCGTGGCATGCTGGCTCAAGGGGCTaGAGGAGCCAAAGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGRALGHVVTVRKVGAWHAGSRG*RSQSDG Trigger: ACCATCACTTTGGCTCCTGCAGCCCCTTGAGCCAGC...ATGCCACGCCCCTACTTTCCTGACTGTCACCACATGGCCAAGGGCTCTGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | CAGGACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTGGAAGGCATCCAGGGTaGTCCAGGGCAGCAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: QDCASLFLEQSIMPGASAGRHPG*SRAAGT Trigger: GGTACCTGCTGCCCTGGAGCACCCTGGATGCCTTCC...AGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACGGCACAGCCGGAGCCTaGTCAGGCGGCTCAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLSPCHPLYFLQWPHSQYGTAGA*SGGSAG Trigger: TCCCGCTGAGCCGCCTGAGCAGGCTCCGGCTGTGCC...GTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | TGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTCTCCTACCAGGTAGGAGCTGCTaGTCGGCCTCTCGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CASLFLEQSIMPGASALLPGRSC*SASRLP Trigger: AGGCAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGG...TAGGAGAGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR CCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAAGGGCCCGGCCAGAGCTaGCTCAAGGGGCTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQGPGQS*LKGLQE Trigger: CTCCTGCAGCCCCTTGAGCCAGCTCTGGCCGGGCCC...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| 3UTR CAA 72 bp | CCCGCAAGGGACTCTCCAGCATTAGCCCCCATTGTCTaGGGAAACTCTGGGGCACCGGCTGCTCAGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PARDSPALAPIV*GNSGAPAAQKS Trigger: TGACTTCTGAGCAGCCGGTGCCCCAGAGTTTCCCAAGACAATGGGGGCTAATGCTGGAGAGTCCCTTGCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR TCA 90 bp | TGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTCTCCTACATCGCAGAGCTGCGTaGTCTCCTCATGGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CASLFLEQSIMPGASALLHRRAA*SPHGCG Trigger: GCCGCAGCCATGAGGAGATCACGCAGCTCTGCGATG...TAGGAGAGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACGCTGGCTCAAGGGGCTaGAGGAGCCAAAGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKGLLETCELERAEGAPHAGSRG*RSQSDG Trigger: ACCATCACTTTGGCTCCTGCAGCCCCTTGAGCCAGC...GTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | CAGGACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTGCTTCTTCAGCAGCTTaGGCAGGCAGCAGCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDCASLFLEQSIMPGASAASSAA*AGSSAP Trigger: TGGAGCGCTGCTGCCTGCGCAAGCTGCTGAAGAAGC...AGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCTTGATGTGTGCAGCTGGTTCATGCTaGGGGCCCATCGTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LETCELERAEGAPHTLMCAAGSC*GPIVKP Trigger: AGGCTTCACGATGGGCCCGCAGCATGAACCAGCTGC...ACACATCAAGGTGTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164382.2 |
||
| CDS-3UTR GCA 90 bp | CTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACCAAGCTCGGCCTCTCGCCTaGCTCCGGGGATTCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPCHPLYFLQWPHSQYQARPLA*LRGFVR Trigger: TCTGACGAATCCCCGGAGGCAGGCGAGAGGCCGAGC...TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCTGGAGGAACATTACGCAGTTCTCAGAGTCCCCTTGTCAAGGCTAAGAGCGCAGCTGGTTCATGCTaGGGGCCCATCGTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGGTLRSSQSPLVKAKSAAGSC*GPIVKP Trigger: AGGCTTCACGATGGGCCCGCAGCATGAACCAGCTGC...GCTCTTAGCCTTGACAAGGGGACTCTGAGAACTGCGTAATGTTCCTCCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | TGTCTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACTCTCCAGGTAGGAGCTaGTGCTCGGCCTCTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSPCHPLYFLQWPHSQYSPGRS*CSASRL Trigger: CAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGGAGA...GTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | CAGGACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTGGCCCACCAATAGGATaGGGGGATGCTAGTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QDCASLFLEQSIMPGASAGPPIG*GDASEL Trigger: GAGTTCACTAGCATCCCCGCATCCTATTGGTGGGCC...AGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCAGGCCACACAGATaGATTCCACCACGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: IKGLLETCELERAEGAPHTRPHR*IPPRRC Trigger: ACATCTTCGTGGTGGAATCCATCTGTGTGGCCTGGT...GTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
||
| 3UTR CAA 72 bp | AGTCAGTATTCTGAGCTCACATGCCCAGGTGGTCCATaGGAGAGATGCAGGAGCCCGTCTCAGCCATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQYSELTCPGGP*ERCRSPSQPWD Trigger: ATCCCATGGCTGAGACGGGCTCCTGCATCTCTCCAATGGACCACCTGGGCATGTGAGCTCAGAATACTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR GCA 90 bp | GACAGGGGGTCTGAGGGAGAAGGTGGAAATCTGCAGACTCCGTATTTGGCTCTTGGCCCACCAATAGGATaGGGGGATGCTAGTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: DRGSEGEGGNLQTPYLALGPPIG*GDASEL Trigger: GAGTTCACTAGCATCCCCGCATCCTATTGGTGGGCC...AAGAGCCAAATACGGAGTCTGCAGATTTCCACCTTCTCCCTCAGACCCCCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACGAAGATGGATGTGGCTaGGAAAGCCATGATAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IKGLLETCELERAEGAPHEDGCG*ESHDKD Trigger: ATCCTTATCATGGCTTTCCCAGCCACATCCATCTTC...GTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS-3UTR CCA 90 bp | CAGGACTGTGCTAGCCTATTCCTGGAGCAAAGCATCATGCCAGGGGCCTCAGCTGAAGATGGATGTGGCTaGGAAAGCCATGATAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: QDCASLFLEQSIMPGASAEDGCG*ESHDKD Trigger: ATCCTTATCATGGCTTTCCCAGCCACATCCATCTTC...AGCTGAGGCCCCTGGCATGATGCTTTGCTCCAGGAATAGGCTAGCACAGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| 3UTR CAA 72 bp | AGATTCACAGGGTCCTGTCTATCTCCCTGTCACCCCTaGTACTTTCTCCAGTGGCCTCACAGCCAATACCAA | + |
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Preference number: 4 (lower is better) Translates to: RFTGSCLSPCHP*YFLQWPHSQYQ Trigger: TTGGTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAGACAGGACCCTGTGAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CAA 72 bp | TCTGAGGGAGAAGGTGGAAATCTGCAGACTCCGTATTaGGCTCTTAGTGGAAGTCAGTTCTGTGAGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: SEGEGGNLQTPY*ALSGSQFCEHP Trigger: TGGATGCTCACAGAACTGACTTCCACTAAGAGCCAAATACGGAGTCTGCAGATTTCCACCTTCTCCCTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| 3UTR CAA 72 bp | GAACAGTACGTGCTTCCATGGCATTTGGCAATATGGTaGGTGGTGGAAGGCAGTAAAAGAACACAAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: EQYVLPWHLAIW*VVEGSKRTQDL Trigger: CAGATCTTGTGTTCTTTTACTGCCTTCCACCACCAACCATATTGCCAAATGCCATGGAAGCACGTACTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| CDS-3UTR CAA 90 bp | GGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCCACACCTTGGGAGAGGCGTCCTGGTaGCCCACCTTCCGGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: GLLETCELERAEGAPHTLGEASW*PTFRAL Trigger: CAGGGCCCGGAAGGTGGGCAACCAGGACGCCTCTCC...CAAGGTGTGGGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 90 bp | CTGGTTGCCCACCTTCCGGGCCCTGCTGTAGTAAAGGCCCTTGACTaGCTTAGGCTCGGGGCCCGGCCAGAGCTGGCTCAAGGGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LVAHLPGPAVVKALD*LRLGARPELAQGAA Trigger: TGCAGCCCCTTGAGCCAGCTCTGGCCGGGCCCCGAGCCTAAGTCAGTCAAGGGCCTTTACTACAGCAGGGCCCGGAAGGTGGGCAACCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 90 bp | TCTACGTCACTCAGGAGCTCCCGTTCGCTGGCCGAATTGGTGTTCTaGAGACGCCGGAGGCGGGCCTGGACCTGCTCCTGCTCCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: STSLRSSRSLAELVF*RRRRRAWTCSCSRF Trigger: GAAGCGGGAGCAGGAGCAGGTCCAGGCCCGCCTCCGGCGTCTTCAGAACACCAATTCGGCCAGCGAACGGGAGCTCCTGAGTGACGTAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CCA 90 bp | GCAGGTACCGCTGGCCACCCACATTCACTAGGATCTCCTTCAAGTTaGCCTCCGGAGAGGCGTCCTGGTTGCCCACCTTCCGGGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AGTAGHPHSLGSPSS*PPERRPGCPPSGPC Trigger: GCAGGGCCCGGAAGGTGGGCAACCAGGACGCCTCTCCGGAGGCCAACTTGAAGGAGATCCTAGTGAATGTGGGTGGCCAGCGGTACCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS GCA 90 bp | CCCGCAGAACACGCAGCACTAACCCCACTTTCTCCAGGTAGGAGCTaGTGCTCGGCCTCTCGCCTGCCTCCGGGGATTCGTCAGACACTG | + |
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Preference number: 5 (lower is better) Translates to: PAEHAALTPLSPGRS*CSASRLPPGIRQTL Trigger: CAGTGTCTGACGAATCCCCGGAGGCAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGGAGAAAGTGGGGTTAGTGCTGCGTGTTCTGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS GCA 90 bp | GCAGAACACGCAGCACTAACCCCACTTTCTCCAGGTAGGAGCTGCTaGTCGGCCTCTCGCCTGCCTCCGGGGATTCGTCAGACACTGCGA | + |
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Preference number: 5 (lower is better) Translates to: AEHAALTPLSPGRSC*SASRLPPGIRQTLR Trigger: TCGCAGTGTCTGACGAATCCCCGGAGGCAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGGAGAAAGTGGGGTTAGTGCTGCGTGTTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CCA 90 bp | CCAGATCATCTACGTCACTCAGGAGCTCCCGTTCGCTGGCCGAATTaGTGTTCTGAAGACGCCGGAGGCGGGCCTGGACCTGCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PDHLRHSGAPVRWPN*CSEDAGGGPGPAPA Trigger: AGCAGGAGCAGGTCCAGGCCCGCCTCCGGCGTCTTCAGAACACCAATTCGGCCAGCGAACGGGAGCTCCTGAGTGACGTAGATGATCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CCA 90 bp | CCTCAGGGACCAGATCATCTACGTCACTCAGGAGCTCCCGTTCGCTaGCCGAATTGGTGTTCTGAAGACGCCGGAGGCGGGCCTGGACCT | + |
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Preference number: 5 (lower is better) Translates to: PQGPDHLRHSGAPVR*PNWCSEDAGGGPGP Trigger: AGGTCCAGGCCCGCCTCCGGCGTCTTCAGAACACCAATTCGGCCAGCGAACGGGAGCTCCTGAGTGACGTAGATGATCTGGTCCCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS-3UTR CAA 90 bp | GACATAAAGGGCCTGCTTGAGACCTGTGAGCTTGAGAGGGCTGAGGGTGCTCCCAGCTTCTTCAGCAGCTaGCGCAGGCAGCAGCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: DIKGLLETCELERAEGAPSFFSS*RRQQRS Trigger: GGAGCGCTGCTGCCTGCGCAAGCTGCTGAAGAAGCT...GGGAGCACCCTCAGCCCTCTCAAGCTCACAGGTCTCAAGCAGGCCCTTTATGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS-3UTR CAA 90 bp | TGTCTATCTCCCTGTCACCCCTTGTACTTTCTCCAGTGGCCTCACAGCCAATACGGAGAGGCGTCCTGGTaGCCCACCTTCCGGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: CLSPCHPLYFLQWPHSQYGEASW*PTFRAL Trigger: CAGGGCCCGGAAGGTGGGCAACCAGGACGCCTCTCC...GTATTGGCTGTGAGGCCACTGGAGAAAGTACAAGGGGTGACAGGGAGATAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| CDS-3UTR CAA 90 bp | ATTGGAGAGATGCAGGAGCCCGTCTCAGCCATGGGATGGGTTGAAGCTATGGCAAGCTTCTTCAGCAGCTaGCGCAGGCAGCAGCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: IGEMQEPVSAMGWVEAMASFFSS*RRQQRS Trigger: GGAGCGCTGCTGCCTGCGCAAGCTGCTGAAGAAGCT...TGCCATAGCTTCAACCCATCCCATGGCTGAGACGGGCTCCTGCATCTCTCCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| CDS-3UTR CAA 90 bp | CAAAGAAGGGAAAAGATCCCAGGAGCACTGATCCAGTATGGCAAGATGGGCAGTCTAGTGCATTCTCCCTaGCCCTCCTCAGCCCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: QRREKIPGALIQYGKMGSLVHSP*PSSALK Trigger: CTTCAGGGCTGAGGAGGGCAAGGGAGAATGCACTAG...ACTGCCCATCTTGCCATACTGGATCAGTGCTCCTGGGATCTTTTCCCTTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061828.10 |
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| CDS GCA 72 bp | CGCAGCTGGTTCATGCTGCGGGCCCATCGTGAAGCCTaGACCTCGGAGTGGCAGGCCTGGCGCTGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSWFMLRAHREA*TSEWQAWRCCW Trigger: CCAGCAGCAGCGCCAGGCCTGCCACTCCGAGGTGCAGGCTTCACGATGGGCCCGCAGCATGAACCAGCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 72 bp | CTCAGGAGCTCCCGTTCGCTGGCCGAATTGGTGTTCTaGAGACGCCGGAGGCGGGCCTGGACCTGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRSSRSLAELVF*RRRRRAWTCSC Trigger: GCAGGAGCAGGTCCAGGCCCGCCTCCGGCGTCTTCAGAACACCAATTCGGCCAGCGAACGGGAGCTCCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 72 bp | CATTTCACGCAGCTGGTTCATGCTGCGGGCCCATCGTaGAGCCTGCACCTCGGAGTGGCAGGCCTGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: HFTQLVHAAGPS*SLHLGVAGLAL Trigger: CAGCGCCAGGCCTGCCACTCCGAGGTGCAGGCTTCACGATGGGCCCGCAGCATGAACCAGCTGCGTGAAATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 72 bp | CACCTTCCGGGCCCTGCTGTAGTAAAGGCCCTTGACTaGCTTAGGCTCGGGGCCCGGCCAGAGCTGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: HLPGPAVVKALD*LRLGARPELAQ Trigger: TTGAGCCAGCTCTGGCCGGGCCCCGAGCCTAAGTCAGTCAAGGGCCTTTACTACAGCAGGGCCCGGAAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 72 bp | CCTGGCTGTCCTCATCGTAGTCATCGCAGAGCTGCGTaGTCTCCTCATGGCTGCGGCACAGCCGGAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGCPHRSHRRAA*SPHGCGTAGAC Trigger: GCAGGCTCCGGCTGTGCCGCAGCCATGAGGAGATCACGCAGCTCTGCGATGACTACGATGAGGACAGCCAGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS GCA 72 bp | TTTCTCCAGGTAGGAGCTGCTGCTCGGCCTCTCGCCTaGCTCCGGGGATTCGTCAGACACTGCGAGCGACAC | + |
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Preference number: 6 (lower is better) Translates to: FLQVGAAARPLA*LRGFVRHCERH Trigger: GTGTCGCTCGCAGTGTCTGACGAATCCCCGGAGGCAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGGAGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS GCA 72 bp | GCAGCACTAACCCCACTTTCTCCAGGTAGGAGCTGCTaGTCGGCCTCTCGCCTGCCTCCGGGGATTCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: AALTPLSPGRSC*SASRLPPGIRQ Trigger: CTGACGAATCCCCGGAGGCAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGGAGAAAGTGGGGTTAGTGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS GCA 72 bp | CACGCAGCACTAACCCCACTTTCTCCAGGTAGGAGCTaGTGCTCGGCCTCTCGCCTGCCTCCGGGGATTCGT | + |
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Preference number: 6 (lower is better) Translates to: HAALTPLSPGRS*CSASRLPPGIR Trigger: ACGAATCCCCGGAGGCAGGCGAGAGGCCGAGCAGCAGCTCCTACCTGGAGAAAGTGGGGTTAGTGCTGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CCA 72 bp | AGCCCCGACTGTGGGTCCTCCACCATTTCACGCAGCTaGTTCATGCTGCGGGCCCATCGTGAAGCCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: SPDCGSSTISRS*FMLRAHREACT Trigger: GGTGCAGGCTTCACGATGGGCCCGCAGCATGAACCAGCTGCGTGAAATGGTGGAGGACCCACAGTCGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CCA 72 bp | CTACGTCACTCAGGAGCTCCCGTTCGCTGGCCGAATTaGTGTTCTGAAGACGCCGGAGGCGGGCCTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: LRHSGAPVRWPN*CSEDAGGGPGP Trigger: AGGTCCAGGCCCGCCTCCGGCGTCTTCAGAACACCAATTCGGCCAGCGAACGGGAGCTCCTGAGTGACGTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CAA 90 bp | AGCAGGTACCGCTGGCCACCCACATTCACTAGGATCTCCTTCAAGTaGGCCTCCGGAGAGGCGTCCTGGTTGCCCACCTTCCGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SRYRWPPTFTRISFK*ASGEASWLPTFRAL Trigger: CAGGGCCCGGAAGGTGGGCAACCAGGACGCCTCTCCGGAGGCCAACTTGAAGGAGATCCTAGTGAATGTGGGTGGCCAGCGGTACCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS GCA 72 bp | TCTCCTTCAAGTTGGCCTCCGGAGAGGCGTCCTGGTTaGCCACCTTCCGGGCCCTGCTGTAGTAAAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SPSSWPPERRPG*PPSGPCCSKGP Trigger: AGGGCCTTTACTACAGCAGGGCCCGGAAGGTGGGCAACCAGGACGCCTCTCCGGAGGCCAACTTGAAGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CCA 72 bp | GCTGGCCACCCACATTCACTAGGATCTCCTTCAAGTTaGCCTCCGGAGAGGCGTCCTGGTTGCCCACCTTCC | + |
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Preference number: 6 (lower is better) Translates to: AGHPHSLGSPSS*PPERRPGCPPS Trigger: GGAAGGTGGGCAACCAGGACGCCTCTCCGGAGGCCAACTTGAAGGAGATCCTAGTGAATGTGGGTGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CAA 72 bp | CGCTGGCCACCCACATTCACTAGGATCTCCTTCAAGTaGGCCTCCGGAGAGGCGTCCTGGTTGCCCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: RWPPTFTRISFK*ASGEASWLPTF Trigger: GAAGGTGGGCAACCAGGACGCCTCTCCGGAGGCCAACTTGAAGGAGATCCTAGTGAATGTGGGTGGCCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS CCA 72 bp | AAGGCATCCAGGGTGCTCCAGGGCAGCAGGTACCGCTaGCCACCCACATTCACTAGGATCTCCTTCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: KASRVLQGSRYR*PPTFTRISFKL Trigger: CAACTTGAAGGAGATCCTAGTGAATGTGGGTGGCCAGCGGTACCTGCTGCCCTGGAGCACCCTGGATGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 72 bp | AGAATGTCGATGACATTCAGGGGCCCGCGGAAGAACTaGCATTTGTTCGGGGCCTGGACAAAGCGCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RMSMTFRGPRKN*HLFGAWTKRRQ Trigger: TTGCCTGCGCTTTGTCCAGGCCCCGAACAAATGTCAGTTCTTCCGCGGGCCCCTGAATGTCATCGACATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 72 bp | CCTTCCGGACTCATTCTCAGCTACATAGACCAACGGTaGGAAGAGGGTAACCGCCACAGCCAGGAAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: PSGLILSYIDQR*EEGNRHSQEEH Trigger: ATGCTCTTCCTGGCTGTGGCGGTTACCCTCTTCTCACCGTTGGTCTATGTAGCTGAGAATGAGTCCGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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| CDS TCA 72 bp | GCGACACATAGTATGGGGAGATGGCTAGAATGTCGATaGCATTCAGGGGCCCGCGGAAGAACTGACATTTGT | + |
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Preference number: 6 (lower is better) Translates to: ATHSMGRWLECR*HSGARGRTDIC Trigger: ACAAATGTCAGTTCTTCCGCGGGCCCCTGAATGTCATCGACATTCTAGCCATCTCCCCATACTATGTGTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061828.10 ENSMUST00000164382.2 |
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