Pregenerated sensors for KCNG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045053Ensembl transcript IDs: ENSMUST00000051482.2, ENSMUST00000234613.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAGCAGTGTCTGATAACTTTACAAAAAGAGACCCAGTGTATCCGTaGTTCACAATGGTGAGGAGTCAGGCCAGAGAACTACATCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: VAVSDNFTKRDPVYP*FTMVRSQARELHLP Trigger: GGGCAGATGTAGTTCTCTGGCCTGACTCCTCACCATTGTGAAGCACGGATACACTGGGTCTCTTTTTGTAAAGTTATCAGACACTGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR CCA 90 bp | ATGAATTTGCTATTATTGCCTGATCATGGCAACGAGAATGAAATGTaGCCTATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: MNLLLLPDHGNENEM*PMLVSAKARGVCRA Trigger: TGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCATAGGCCACATTTCATTCTCGTTGCCATGATCAGGCAATAATAGCAAATTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCCTGTGCGAGGCAAGGTaGAGGGAGACGAGAGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: MLVSAKARGVCRANCWACLCEAR*RETRGN Trigger: ATTCCCTCTCGTCTCCCTCCACCTTGCCTCGCACAG...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCGTTATTTCAGTAAAGTaGGGGCCTAACTGGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: MLVSAKARGVCRANCWACVISVK*GPNWKE Trigger: CTCTTTCCAGTTAGGCCCCCACTTTACTGAAATAAC...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTTCTCTCGTCATTTCATGTTAGCAATGCTCCTGGCAATCTGAATGCTAGGACAACACCATTGCAGTaGTCACCCAGGGAGAAACAC | + |
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Preference number: 2 (lower is better) Translates to: ALLSSFHVSNAPGNLNARTTPLQ*SPREKH Trigger: GTGTTTCTCCCTGGGTGAGCACTGCAATGGTGTTGT...CCTAGCATTCAGATTGCCAGGAGCATTGCTAACATGAAATGACGAGAGAAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR TCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCTCCGGGTCGAACCCTaGAATATCACAGCACTTCTC | + |
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Preference number: 2 (lower is better) Translates to: AIFSFILQKRSSEQPALLLRVEP*NITALL Trigger: GAGAAGTGCTGTGATATTTCAGGGTTCGACCCGGAG...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGTAATGATAAAAGCTGGACTGATGGCTAAGATTCCTTTAATGGACACTTCTACAACACCATTGCAGTaGTCACCCAGGGAGAAACAC | + |
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Preference number: 2 (lower is better) Translates to: PVMIKAGLMAKIPLMDTSTTPLQ*SPREKH Trigger: GTGTTTCTCCCTGGGTGAGCACTGCAATGGTGTTGT...AGAAGTGTCCATTAAAGGAATCTTAGCCATCAGTCCAGCTTTTATCATTACGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR GCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGGACCCAGTGTATCCGTaGTTCACAATGGTGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AIFSFILQKRSSEQPALLDPVYP*FTMVRS Trigger: ACTCCTCACCATTGTGAAGCACGGATACACTGGGTC...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR CAA 90 bp | AGAGCGCTAAACAACACAAGGTCTCTCCGTGATATCATGTACTCTTaGGAAGTTATTTCAGTAAAGTGGGGGCCTAACTGGAAAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RALNNTRSLRDIMYS*EVISVKWGPNWKEK Trigger: TTTCTCTTTCCAGTTAGGCCCCCACTTTACTGAAATAACTTCCAAAGAGTACATGATATCACGGAGAGACCTTGTGTTGTTTAGCGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR GCA 90 bp | ATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCACAGTGTTCAAATAATGTaGTTAAGAACAGCCTACAAC | + |
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Preference number: 2 (lower is better) Translates to: IFSFILQKRSSEQPALLHSVQIM*LRTAYN Trigger: GTTGTAGGCTGTTCTTAAGCACATTATTTGAACACT...GTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR GCA 72 bp | AAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTaGTTAAAGGAGGCTAAGTTTCCAGCGCCAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: KARGVCRANCWA*LKEAKFPAPTA Trigger: TGCAGTTGGCGCTGGAAACTTAGCCTCCTTTAAGCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR GCA 72 bp | ATGGTGAGGAGTCAGGCCAGAGAACTACATCTGCCCTaGTTAGCAACACCGGACCAAGACAACAACATTTCT | + |
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Preference number: 3 (lower is better) Translates to: MVRSQARELHLP*LATPDQDNNIS Trigger: AGAAATGTTGTTGTCTTGGTCCGGTGTTGCTAAGCAGGGCAGATGTAGTTCTCTGGCCTGACTCCTCACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR CAA 90 bp | GCACTTCTCTCGTCATTTCATGTTAGCAATGCTCCTGGCAATCTGAATGCTAGGGCTTTAACCCTTGAGTaGGGAAGAATCATGTCACCC | + |
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Preference number: 3 (lower is better) Translates to: ALLSSFHVSNAPGNLNARALTLE*GRIMSP Trigger: GGGTGACATGATTCTTCCCAACTCAAGGGTTAAAGC...CCTAGCATTCAGATTGCCAGGAGCATTGCTAACATGAAATGACGAGAGAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR-3UTR CAA 90 bp | CCCGTAATGATAAAAGCTGGACTGATGGCTAAGATTCCTTTAATGGACACTTCTGAACAGCCAGCACTTTaGCACACCAGCACTCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: PVMIKAGLMAKIPLMDTSEQPAL*HTSTLD Trigger: GTCCAGAGTGCTGGTGTGCAAAAGTGCTGGCTGTTC...AGAAGTGTCCATTAAAGGAATCTTAGCCATCAGTCCAGCTTTTATCATTACGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR TCA 72 bp | AAGAAGAGCTTCAGCCGAGAACTCCGGGTCGAACCCTaGAATATCACAGCACTTCTCTCGTCATTTCATGTT | + |
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Preference number: 3 (lower is better) Translates to: KKSFSRELRVEP*NITALLSSFHV Trigger: AACATGAAATGACGAGAGAAGTGCTGTGATATTTCAGGGTTCGACCCGGAGTTCTCGGCTGAAGCTCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR CCA 72 bp | CTATTATTGCCTGATCATGGCAACGAGAATGAAATGTaGCCTATGCTAGTTTCTGCCAAAGCTAGAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: LLLPDHGNENEM*PMLVSAKARGV Trigger: CACGCCTCTAGCTTTGGCAGAAACTAGCATAGGCCACATTTCATTCTCGTTGCCATGATCAGGCAATAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR GCA 72 bp | TCTGATAACTTTACAAAAAGAGACCCAGTGTATCCGTaGTTCACAATGGTGAGGAGTCAGGCCAGAGAACTA | + |
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Preference number: 3 (lower is better) Translates to: SDNFTKRDPVYP*FTMVRSQAREL Trigger: TAGTTCTCTGGCCTGACTCCTCACCATTGTGAAGCACGGATACACTGGGTCTCTTTTTGTAAAGTTATCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR TCA 72 bp | ACCCAACAGAGCGCTAAACAACACAAGGTCTCTCCGTaGTATCATGTACTCTTTGGAAGTTATTTCAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: TQQSAKQHKVSP*YHVLFGSYFSK Trigger: TTTACTGAAATAACTTCCAAAGAGTACATGATATCACGGAGAGACCTTGTGTTGTTTAGCGCTCTGTTGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | GGTGAGGAGTCAGGCCAGAGAACTACATCTGCCCTGCTTAGCAACACCGGACCACAGCAGTACTCCAGGTaGGCACCCTCCAGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GEESGQRTTSALLSNTGPQQYSR*APSRPQ Trigger: CTGGGGCCTGGAGGGTGCGCACCTGGAGTACTGCTG...TGGTCCGGTGTTGCTAAGCAGGGCAGATGTAGTTCTCTGGCCTGACTCCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCGCCAGTCGGGCAGCGTaGTGGCGCACAGCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: MLVSAKARGVCRANCWACASRAA*WRTAPP Trigger: TGGTGGTGCTGTGCGCCAGCACGCTGCCCGACTGGC...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | CCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCATTGCGAAGGTCCGCCGCATaGGCTCCAGCCAGCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: PLSWEESCHPSNRRTTPLRRSAA*APASAG Trigger: CCCGGCGCTGGCTGGAGCGCATGCGGCGGACCTTCG...CAATGGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | GGTGAGGAGTCAGGCCAGAGAACTACATCTGCCCTGCTTAGCAACACCGGACCATCGTCTAGGCGGCGCTaGCAGCAGTACTCCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GEESGQRTTSALLSNTGPSSRRR*QQYSRC Trigger: GCACCTGGAGTACTGCTGCCAGCGCCGCCTAGACGA...TGGTCCGGTGTTGCTAAGCAGGGCAGATGTAGTTCTCTGGCCTGACTCCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCACACCACGGACACGCTaGCCAGGATCTGCGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: MLVSAKARGVCRANCWACTPRTR*PGSARP Trigger: TGGCCGCGCAGATCCTGGCCAGCGTGTCCGTGGTGT...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCAGCTCGTCTGCCGCGTaGAAGGTGTGGGTGTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: MLVSAKARGVCRANCWACSSSAA*KVWVSD Trigger: GTCCGACACCCACACCTTTCACGCGGCAGACGAGCT...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | TTAACCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCCGAAGGTCCGCCGCATaGGCTCCAGCCAGCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LTLELGRIMSPFQQEDNTRRSAA*APASAG Trigger: CCCGGCGCTGGCTGGAGCGCATGCGGCGGACCTTCG...GGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGGTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCGGCTGGCGGAGTACCTaGTCCGGTCATCCAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: MLVSAKARGVCRANCWACGWRST*SGHPDC Trigger: GCAGTCTGGATGACCGGAGCAGGTACTCCGCCAGCC...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051482.2 |
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| CDS-3UTR TCA 90 bp | CCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCATTGGCAGCGGGAAGTCCTTaGGCAGCTCCCGGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: PLSWEESCHPSNRRTTPLAAGSP*AAPGTA Trigger: CGCTGTCCCGGGAGCTGCTCAAGGACTTCCCGCTGC...CAATGGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | GCAGTGCTCACCCAGGGAGAAACACGCGAAGAAGAACTAGTGTCAACTCGACCAGCACGTACAGCAGGATaGAGCCGAAGGCCTCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: AVLTQGETREEELVSTRPARTAG*SRRPPS Trigger: ACTCGGAGGCCTTCGGCTTCATCCTGCTGTACGTGC...TGGTCGAGTTGACACTAGTTCTTCTTCGCGTGTTTCTCCCTGGGTGAGCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | GGTGAGGAGTCAGGCCAGAGAACTACATCTGCCCTGCTTAGCAACACCGGACCACTCGGTAGCATCGCTTaGGAGTCAAGCCCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GEESGQRTTSALLSNTGPLGSIA*ESSPVS Trigger: AGACACTGGGCTTGACTCTCAAGCGATGCTACCGAG...TGGTCCGGTGTTGCTAAGCAGGGCAGATGTAGTTCTCTGGCCTGACTCCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | GCACTTCTCTCGTCATTTCATGTTAGCAATGCTCCTGGCAATCTGAATGCTAGGGCAGCGGGAAGTCCTTaGGCAGCTCCCGGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: ALLSSFHVSNAPGNLNARAAGSP*AAPGTA Trigger: CGCTGTCCCGGGAGCTGCTCAAGGACTTCCCGCTGC...CCTAGCATTCAGATTGCCAGGAGCATTGCTAACATGAAATGACGAGAGAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | GCAGTGCTCACCCAGGGAGAAACACGCGAAGAAGAACTAGTGTCAACTCGACCAAGTGCCGGGCAAGCTTaGTCACCCAGAAGATCCGCA | + |
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Preference number: 4 (lower is better) Translates to: AVLTQGETREEELVSTRPSAGQA*SPRRSA Trigger: TGCGGATCTTCTGGGTGATCAAGCTTGCCCGGCACT...TGGTCGAGTTGACACTAGTTCTTCTTCGCGTGTTTCTCCCTGGGTGAGCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | CCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCATTGTGTGGGTGTCGGACATaGGGTCGTCTAGGCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PLSWEESCHPSNRRTTPLCGCRT*GRLGGA Trigger: AGCGCCGCCTAGACGACCGCATGTCCGACACCCACA...CAATGGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | GCACTTCTCTCGTCATTTCATGTTAGCAATGCTCCTGGCAATCTGAATGCTAGGACGCTGGCCAGGATCTaGGCGGCCAGCGACGACGTG | + |
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Preference number: 4 (lower is better) Translates to: ALLSSFHVSNAPGNLNARTLARI*AASDDV Trigger: CACGTCGTCGCTGGCCGCGCAGATCCTGGCCAGCGT...CCTAGCATTCAGATTGCCAGGAGCATTGCTAACATGAAATGACGAGAGAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCGTCAAGCCCAGTGTCTaGAGACCAATGAAGTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: MLVSAKARGVCRANCWACVKPSV*RPMKCR Trigger: CCGGCACTTCATTGGTCTGCAGACACTGGGCTTGAC...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCAGGCAGCGGGGATGCTaGCGAAATCCTTGTTGGATG | + |
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Preference number: 4 (lower is better) Translates to: MLVSAKARGVCRANCWACRQRGC*RNPCWM Trigger: CATCCAACAAGGATTTCGCCAGCATCCCCGCTGCCT...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | CCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCATTGGCACGTACAGCAGGATaGAGCCGAAGGCCTCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: PLSWEESCHPSNRRTTPLARTAG*SRRPPS Trigger: ACTCGGAGGCCTTCGGCTTCATCCTGCTGTACGTGC...CAATGGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCTGTTTTTGGAGACGATaGACCGCACGATGCACTCCG | + |
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Preference number: 4 (lower is better) Translates to: MLVSAKARGVCRANCWACCFWRR*TARCTP Trigger: CGGAGTGCATCGTGCGGTTCATCGTCTCCAAAAACA...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | TTAACCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCTCGTCTAGGCGGCGCTaGCAGCAGTACTCCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LTLELGRIMSPFQQEDNTSSRRR*QQYSRC Trigger: GCACCTGGAGTACTGCTGCCAGCGCCGCCTAGACGA...GGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGGTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | GCACTTCTCTCGTCATTTCATGTTAGCAATGCTCCTGGCAATCTGAATGCTAGGACACCACGGACACGCTaGCCAGGATCTGCGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ALLSSFHVSNAPGNLNARTPRTR*PGSARP Trigger: TGGCCGCGCAGATCCTGGCCAGCGTGTCCGTGGTGT...CCTAGCATTCAGATTGCCAGGAGCATTGCTAACATGAAATGACGAGAGAAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | CCCGTAATGATAAAAGCTGGACTGATGGCTAAGATTCCTTTAATGGACACTTCTCGGCCAGCGACGACGTaGGCTCCTCGAAGGTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PVMIKAGLMAKIPLMDTSRPATT*APRRSA Trigger: GGCGGACCTTCGAGGAGCCCACGTCGTCGCTGGCCG...AGAAGTGTCCATTAAAGGAATCTTAGCCATCAGTCCAGCTTTTATCATTACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR CAA 72 bp | GAATCATGTCACCCTTCCAACAGGAGGACAACACCATaGCAGTGCTCACCCAGGGAGAAACACGCGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ESCHPSNRRTTP*QCSPREKHAKK Trigger: CTTCTTCGCGTGTTTCTCCCTGGGTGAGCACTGCAATGGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | CCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCATTGCCAGCCCTCTGGAGTTaGGAGTTCTCGCCTGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: PLSWEESCHPSNRRTTPLPALWS*EFSPVN Trigger: GTTTACAGGCGAGAACTCTCAACTCCAGAGGGCTGG...CAATGGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGGCCAGTCGGGCAGCGTaGTGGCGCACAGCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLASRAA*WRTAPP Trigger: TGGTGGTGCTGTGCGCCAGCACGCTGCCCGACTGGC...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | CCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCATTGGTCAAGCCCAGTGTCTaGAGACCAATGAAGTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSWEESCHPSNRRTTPLVKPSV*RPMKCR Trigger: CCGGCACTTCATTGGTCTGCAGACACTGGGCTTGAC...CAATGGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCAAGGAGCTGAGAGAGTaGACTAAAGATTGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLVSAKARGVCRANCWACKELRE*TKDCHG Trigger: GCCATGGCAATCTTTAGTGCACTCTCTCAGCTCCTT...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | ATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCACAAGCGCAGCTTCCCGTaGCCGCGCACGTACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFSFILQKRSSEQPALLHKRSFP*PRTYSR Trigger: CCTGCTGTACGTGCGCGGCCACGGGAAGCTGCGCTT...GTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCACAGTCGGGCAGCGTGCTaGCGCACAGCACCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IFSFILQKRSSEQPALLHSRAAC*RTAPPW Trigger: CCATGGTGGTGCTGTGCGCCAGCACGCTGCCCGACT...GTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCACGTTCCCTCCCAGGGCTaGCGGAGTACCTGCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSFILQKRSSEQPALLHVPSQG*RSTCSG Trigger: ACCGGAGCAGGTACTCCGCCAGCCCTGGGAGGGAAC...GTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051482.2 |
||
| 3UTR CAA 72 bp | ATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTaGCACACCAGCACTCTGGACGGAGTAGCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILQKRSSEQPAL*HTSTLDGVAVS Trigger: AGACACTGCTACTCCGTCCAGAGTGCTGGTGTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR TCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGGGAGGACCCTCAAGGTaGCCCCAGCCCTCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLGGPSR*PQPSGV Trigger: AACTCCAGAGGGCTGGGGTCACCTTGAGGGTCCTCC...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR TCA 90 bp | ATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCACGGAGGACCCTCAAGGTaGCCCCAGCCCTCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IFSFILQKRSSEQPALLHGGPSR*PQPSGV Trigger: AACTCCAGAGGGCTGGGGTCACCTTGAGGGTCCTCC...GTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR GCA 90 bp | TACTCTTTGGAAGTTATTTCAGTAAAGTGGGGGCCTAACTGGAAAGAGAAAACACAGCAGTACTCCAGGTaGGCACCCTCCAGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSLEVISVKWGPNWKEKTQQYSR*APSRPQ Trigger: CTGGGGCCTGGAGGGTGCGCACCTGGAGTACTGCTG...TGTTTTCTCTTTCCAGTTAGGCCCCCACTTTACTGAAATAACTTCCAAAGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR CCA 90 bp | TACTCTTTGGAAGTTATTTCAGTAAAGTGGGGGCCTAACTGGAAAGAGAAAACAAAGCGCAGCTTCCCGTaGCCGCGCACGTACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSLEVISVKWGPNWKEKTKRSFP*PRTYSR Trigger: CCTGCTGTACGTGCGCGGCCACGGGAAGCTGCGCTT...TGTTTTCTCTTTCCAGTTAGGCCCCCACTTTACTGAAATAACTTCCAAAGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR CCA 90 bp | TACTCTTTGGAAGTTATTTCAGTAAAGTGGGGGCCTAACTGGAAAGAGAAAACAAGTCGGGCAGCGTGCTaGCGCACAGCACCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: YSLEVISVKWGPNWKEKTSRAAC*RTAPPW Trigger: CCATGGTGGTGCTGTGCGCCAGCACGCTGCCCGACT...TGTTTTCTCTTTCCAGTTAGGCCCCCACTTTACTGAAATAACTTCCAAAGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCTCACCCAGGGAGAAACACGCGAAGAAGAACTAGTGTCAACTCGACCATGTTCAGGGGTCTCTTaGCAAACTCACACTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVLTQGETREEELVSTRPCSGVS*QTHTCF Trigger: AAAACAAGTGTGAGTTTGTCAAGAGACCCCTGAACA...TGGTCGAGTTGACACTAGTTCTTCTTCGCGTGTTTCTCCCTGGGTGAGCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR TCA 90 bp | CCCGTAATGATAAAAGCTGGACTGATGGCTAAGATTCCTTTAATGGACACTTCTAGTGCCGGGCAAGCTTaGTCACCCAGAAGATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVMIKAGLMAKIPLMDTSSAGQA*SPRRSA Trigger: TGCGGATCTTCTGGGTGATCAAGCTTGCCCGGCACT...AGAAGTGTCCATTAAAGGAATCTTAGCCATCAGTCCAGCTTTTATCATTACGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR TCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCCAGCCCTCTGGAGTTaGGAGTTCTCGCCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLPALWS*EFSPVN Trigger: GTTTACAGGCGAGAACTCTCAACTCCAGAGGGCTGG...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR TCA 90 bp | TTAACCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCATTCAGGAACTCAGCTaGGAGGCTCCTACTATATCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLELGRIMSPFQQEDNTIQELS*EAPTIS Trigger: AGATATAGTAGGAGCCTCTCAGCTGAGTTCCTGAAT...GGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCACCGAAGAAGTACTCGTTaGGCTCCCGGTCGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSFILQKRSSEQPALLHRRSTR*APGRSR Trigger: ACGACTACGACCGGGAGCGCAACGAGTACTTCTTCG...GTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR GCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCGAAGAAGTACTCGTTaGGCTCCCGGTCGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLRRSTR*APGRSR Trigger: ACGACTACGACCGGGAGCGCAACGAGTACTTCTTCG...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCGCACAGCACCACCATaGACACGATCACGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLRTAPP*TRSRTP Trigger: TGGTGTTCGTGATCGTGTCCATGGTGGTGCTGTGCG...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR GCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGTGCAGACCAATGAAGTaGCGGGCAAGCTTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLCRPMK*RASLIT Trigger: GGTGATCAAGCTTGCCCGGCACTTCATTGGTCTGCA...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCACTGCAGACCAATGAAGTaGCGGGCAAGCTTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: IFSFILQKRSSEQPALLHCRPMK*RASLIT Trigger: GGTGATCAAGCTTGCCCGGCACTTCATTGGTCTGCA...GTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGTTAAGTTCCAAGCTTCTTCTGAATTCGTTAAGATGGAAAAGCATTTGGCTCGGTAGCATCGCTTaGGAGTCAAGCCCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLSSKLLLNSLRWKSIWLGSIA*ESSPVS Trigger: AGACACTGGGCTTGACTCTCAAGCGATGCTACCGAG...CCAAATGCTTTTCCATCTTAACGAATTCAGAAGAAGCTTGGAACTTAACAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | ACACTGTTAAGTTCCAAGCTTCTTCTGAATTCGTTAAGATGGAAAAGCATTTGGCGCACAGCACCACCATaGACACGATCACGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLSSKLLLNSLRWKSIWRTAPP*TRSRTP Trigger: TGGTGTTCGTGATCGTGTCCATGGTGGTGCTGTGCG...CCAAATGCTTTTCCATCTTAACGAATTCAGAAGAAGCTTGGAACTTAACAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGTGGCGAAATCCTTGTTaGATGTTTCCAGGTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLWRNPC*MFPGPA Trigger: GGCTGGACCTGGAAACATCCAACAAGGATTTCGCCA...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | ACACTGTTAAGTTCCAAGCTTCTTCTGAATTCGTTAAGATGGAAAAGCATTTGGAGGCAGCGGGGATGCTaGCGAAATCCTTGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLLSSKLLLNSLRWKSIWRQRGC*RNPCWM Trigger: CATCCAACAAGGATTTCGCCAGCATCCCCGCTGCCT...CCAAATGCTTTTCCATCTTAACGAATTCAGAAGAAGCTTGGAACTTAACAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | ACACTGTTAAGTTCCAAGCTTCTTCTGAATTCGTTAAGATGGAAAAGCATTTGGTGTTTTTGGAGACGATaGACCGCACGATGCACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLSSKLLLNSLRWKSIWCFWRR*TARCTP Trigger: CGGAGTGCATCGTGCGGTTCATCGTCTCCAAAAACA...CCAAATGCTTTTCCATCTTAACGAATTCAGAAGAAGCTTGGAACTTAACAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CCA 90 bp | TACTCTTTGGAAGTTATTTCAGTAAAGTGGGGGCCTAACTGGAAAGAGAAAACATGGCGAAATCCTTGTTaGATGTTTCCAGGTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YSLEVISVKWGPNWKEKTWRNPC*MFPGPA Trigger: GGCTGGACCTGGAAACATCCAACAAGGATTTCGCCA...TGTTTTCTCTTTCCAGTTAGGCCCCCACTTTACTGAAATAACTTCCAAAGAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR CAA 72 bp | AACAACACAAGGTCTCTCCGTGATATCATGTACTCTTaGGAAGTTATTTCAGTAAAGTGGGGGCCTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTRSLRDIMYS*EVISVKWGPNW Trigger: CCAGTTAGGCCCCCACTTTACTGAAATAACTTCCAAAGAGTACATGATATCACGGAGAGACCTTGTGTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGATTCAGGAACTCAGCTaGGAGGCTCCTACTATATCT | + |
|
Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLIQELS*EAPTIS Trigger: AGATATAGTAGGAGCCTCTCAGCTGAGTTCCTGAAT...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR TCA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGTGTTCAGGGGTCTCTTaGCAAACTCACACTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIFSFILQKRSSEQPALLCSGVS*QTHTCF Trigger: AAAACAAGTGTGAGTTTGTCAAGAGACCCCTGAACA...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR GCA 90 bp | ACACTGTTAAGTTCCAAGCTTCTTCTGAATTCGTTAAGATGGAAAAGCATTTGGAAGGAGCTGAGAGAGTaGACTAAAGATTGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLLSSKLLLNSLRWKSIWKELRE*TKDCHG Trigger: GCCATGGCAATCTTTAGTGCACTCTCTCAGCTCCTT...CCAAATGCTTTTCCATCTTAACGAATTCAGAAGAAGCTTGGAACTTAACAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| 3UTR CAA 72 bp | GAGGTTTTTATTTTTAATGGGCAGTATCACATGAATTaGCTATTATTGCCTGATCATGGCAACGAGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVFIFNGQYHMN*LLLPDHGNENE Trigger: TTCATTCTCGTTGCCATGATCAGGCAATAATAGCAAATTCATGTGATACTGCCCATTAAAAATAAAAACCTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS GCA 90 bp | TCTGCGCGGCCAGCGACGACGTGGGCTCCTCGAAGGTCCGCCGCATaGGCTCCAGCCAGCGCCGGGAGGGGGCCGCCTCGGGTCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SARPATTWAPRRSAA*APASAGRGPPRVRR Trigger: CCGCCGGACCCGAGGCGGCCCCCTCCCGGCGCTGGCTGGAGCGCATGCGGCGGACCTTCGAGGAGCCCACGTCGTCGCTGGCCGCGCAGA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS TCA 90 bp | AGCGGCAGCCGTGCAGCCGGCTCACGCGGCGCAGCGGGAAGTCCTTaGGCAGCTCCCGGGACAGCGAGTACCGGGCGCCGCCCACGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSRAAGSRGAAGSP*AAPGTASTGRRPRS Trigger: TGAACGTGGGCGGCGCCCGGTACTCGCTGTCCCGGGAGCTGCTCAAGGACTTCCCGCTGCGCCGCGTGAGCCGGCTGCACGGCTGCCGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CCA 90 bp | ACACCACGGACACGCTGGCCAGGATCTGCGCGGCCAGCGACGACGTaGGCTCCTCGAAGGTCCGCCGCATGCGCTCCAGCCAGCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TPRTRWPGSARPATT*APRRSAACAPASAG Trigger: CCCGGCGCTGGCTGGAGCGCATGCGGCGGACCTTCGAGGAGCCCACGTCGTCGCTGGCCGCGCAGATCCTGGCCAGCGTGTCCGTGGTGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS TCA 90 bp | GGTCCGGCGGGACGAGGCTGCTCGCGGCCCAGCTCGTCTGCCGCGTaGAAGGTGTGGGTGTCGGACATGCGGTCGTCTAGGCGGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPAGRGCSRPSSSAA*KVWVSDMRSSRRRW Trigger: CCAGCGCCGCCTAGACGACCGCATGTCCGACACCCACACCTTTCACGCGGCAGACGAGCTGGGCCGCGAGCAGCCTCGTCCCGCCGGACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS GCA 90 bp | CGCGGCCCAGCTCGTCTGCCGCGTGAAAGGTGTGGGTGTCGGACATaGGGTCGTCTAGGCGGCGCTGGCAGCAGTACTCCAGGTGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGPARLPRERCGCRT*GRLGGAGSSTPGAH Trigger: GTGCGCACCTGGAGTACTGCTGCCAGCGCCGCCTAGACGACCGCATGTCCGACACCCACACCTTTCACGCGGCAGACGAGCTGGGCCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS GCA 90 bp | GTTCCCTCCCAGGGCTGGCGGAGTACCTGCTCCGGTCATCCAGACTaGGGTTGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPSQGWRSTCSGHPD*GCQQPPHASRAACW Trigger: CCAGCACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACAACCGCAGTCTGGATGACCGGAGCAGGTACTCCGCCAGCCCTGGGAGGGAAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051482.2 |
||
| CDS CCA 90 bp | CCGCCGCACGCCAGTCGGGCAGCGTGCTGGCGCACAGCACCACCATaGACACGATCACGAACACCACGGACACGCTGGCCAGGATCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PPHASRAACWRTAPP*TRSRTPRTRWPGSA Trigger: CGCAGATCCTGGCCAGCGTGTCCGTGGTGTTCGTGATCGTGTCCATGGTGGTGCTGTGCGCCAGCACGCTGCCCGACTGGCGTGCGGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS GCA 90 bp | CCAGACTGCGGTTGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTaGTGGCGCACAGCACCACCATGGACACGATCACGAACACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: PDCGCQQPPHASRAA*WRTAPPWTRSRTPR Trigger: CCGTGGTGTTCGTGATCGTGTCCATGGTGGTGCTGTGCGCCAGCACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACAACCGCAGTCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS CCA 90 bp | GACTGCGGTTGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTGCTaGCGCACAGCACCACCATGGACACGATCACGAACACCACGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DCGCQQPPHASRAAC*RTAPPWTRSRTPRT Trigger: TGTCCGTGGTGTTCGTGATCGTGTCCATGGTGGTGCTGTGCGCCAGCACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACAACCGCAGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS GCA 90 bp | CTTCAATTATCCCGGAGGGTTCCCTCCCAGGGCTGGCGGAGTACCTaGTCCGGTCATCCAGACTGCGGTTGTCAGCAACCGCCGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQLSRRVPSQGWRST*SGHPDCGCQQPPHA Trigger: GGCGTGCGGCGGTTGCTGACAACCGCAGTCTGGATGACCGGAGCAGGTACTCCGCCAGCCCTGGGAGGGAACCCTCCGGGATAATTGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051482.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCCGCAGCGGGAAGTCCTaGAGCAGCTCCCGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: MLVSAKARGVCRANCWACRSGKS*SSSRDS Trigger: GCTGTCCCGGGAGCTGCTCAAGGACTTCCCGCTGCG...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGCTCACCCAGGGAGAAACACGCGAAGAAGAACTAGTGTCAACTCGACCACGCAGCGGGAAGTCCTaGAGCAGCTCCCGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVLTQGETREEELVSTRPRSGKS*SSSRDS Trigger: GCTGTCCCGGGAGCTGCTCAAGGACTTCCCGCTGCG...TGGTCGAGTTGACACTAGTTCTTCTTCGCGTGTTTCTCCCTGGGTGAGCACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTAGTTTCTGCCAAAGCTAGAGGCGTGTGCAGAGCAAACTGCTGGGCCTGCCCCAGCCCTCTGGAGTaGAGAGTTCTCGCCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MLVSAKARGVCRANCWACPSPLE*RVLACK Trigger: TTTACAGGCGAGAACTCTCAACTCCAGAGGGCTGGG...GCAGGCCCAGCAGTTTGCTCTGCACACGCCTCTAGCTTTGGCAGAAACTAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGGAGTCAGGCCAGAGAACTACATCTGCCCTGCTTAGCAACACCGGACCACTGGCGAAATCCTTGTaGGATGTTTCCAGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GEESGQRTTSALLSNTGPLAKSL*DVSRSS Trigger: GCTGGACCTGGAAACATCCAACAAGGATTTCGCCAG...TGGTCCGGTGTTGCTAAGCAGGGCAGATGTAGTTCTCTGGCCTGACTCCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CAA 90 bp | GCACTTCTCTCGTCATTTCATGTTAGCAATGCTCCTGGCAATCTGAATGCTAGGCTGGCGAAATCCTTGTaGGATGTTTCCAGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ALLSSFHVSNAPGNLNARLAKSL*DVSRSS Trigger: GCTGGACCTGGAAACATCCAACAAGGATTTCGCCAG...CCTAGCATTCAGATTGCCAGGAGCATTGCTAACATGAAATGACGAGAGAAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CAA 90 bp | TTAACCCTTGAGTTGGGAAGAATCATGTCACCCTTCCAACAGGAGGACAACACCAACTCACACTTGTTTTaGGAGACGATGAACCGCACG | + |
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Preference number: 5 (lower is better) Translates to: LTLELGRIMSPFQQEDNTNSHLF*ETMNRT Trigger: CGTGCGGTTCATCGTCTCCAAAAACAAGTGTGAGTT...GGTGTTGTCCTCCTGTTGGAAGGGTGACATGATTCTTCCCAACTCAAGGGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS TCA 90 bp | AAATCCTTGTTGGATGTTTCCAGGTCCAGCCCATGTTCAAGGAGCTaGGAGAGTGCACTAAAGATTGCCATGGCAACACAGATGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: KSLLDVSRSSPCSRS*ESALKIAMATQMKT Trigger: TGTCTTCATCTGTGTTGCCATGGCAATCTTTAGTGCACTCTCTCAGCTCCTTGAACATGGGCTGGACCTGGAAACATCCAACAAGGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CAA 90 bp | ATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGCACCCCAGCCCTCTGGAGTaGAGAGTTCTCGCCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: IFSFILQKRSSEQPALLHPSPLE*RVLACK Trigger: TTTACAGGCGAGAACTCTCAACTCCAGAGGGCTGGG...GTGCAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CAA 90 bp | CCCGTAATGATAAAAGCTGGACTGATGGCTAAGATTCCTTTAATGGACACTTCTATGCTGGCGAAATCCTaGTTGGATGTTTCCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PVMIKAGLMAKIPLMDTSMLAKS*LDVSRS Trigger: GGACCTGGAAACATCCAACAAGGATTTCGCCAGCAT...AGAAGTGTCCATTAAAGGAATCTTAGCCATCAGTCCAGCTTTTATCATTACGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CAA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGAACTCACACTTGTTTTaGGAGACGATGAACCGCACG | + |
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Preference number: 5 (lower is better) Translates to: AIFSFILQKRSSEQPALLNSHLF*ETMNRT Trigger: CGTGCGGTTCATCGTCTCCAAAAACAAGTGTGAGTT...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CAA 90 bp | TACTCTTTGGAAGTTATTTCAGTAAAGTGGGGGCCTAACTGGAAAGAGAAAACAATGCTGGCGAAATCCTaGTTGGATGTTTCCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: YSLEVISVKWGPNWKEKTMLAKS*LDVSRS Trigger: GGACCTGGAAACATCCAACAAGGATTTCGCCAGCAT...TGTTTTCTCTTTCCAGTTAGGCCCCCACTTTACTGAAATAACTTCCAAAGAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS-3UTR CAA 90 bp | GCAATATTTTCATTCATACTGCAGAAACGTAGCAGTGAACAGCCAGCACTTTTGTTGACAAACTCACACTaGTTTTTGGAGACGATGAAC | + |
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Preference number: 5 (lower is better) Translates to: AIFSFILQKRSSEQPALLLTNSH*FLETMN Trigger: GTTCATCGTCTCCAAAAACAAGTGTGAGTTTGTCAA...CAAAAGTGCTGGCTGTTCACTGCTACGTTTCTGCAGTATGAATGAAAATATTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS GCA 72 bp | CCAGCGACGACGTGGGCTCCTCGAAGGTCCGCCGCATaGGCTCCAGCCAGCGCCGGGAGGGGGCCGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PATTWAPRRSAA*APASAGRGPPR Trigger: CCGAGGCGGCCCCCTCCCGGCGCTGGCTGGAGCGCATGCGGCGGACCTTCGAGGAGCCCACGTCGTCGCTGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS TCA 72 bp | CGTGCAGCCGGCTCACGCGGCGCAGCGGGAAGTCCTTaGGCAGCTCCCGGGACAGCGAGTACCGGGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RAAGSRGAAGSP*AAPGTASTGRR Trigger: GCGGCGCCCGGTACTCGCTGTCCCGGGAGCTGCTCAAGGACTTCCCGCTGCGCCGCGTGAGCCGGCTGCACG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CAA 72 bp | CCGTGCAGCCGGCTCACGCGGCGCAGCGGGAAGTCCTaGAGCAGCTCCCGGGACAGCGAGTACCGGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: PCSRLTRRSGKS*SSSRDSEYRAP Trigger: CGGCGCCCGGTACTCGCTGTCCCGGGAGCTGCTCAAGGACTTCCCGCTGCGCCGCGTGAGCCGGCTGCACGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CAA 90 bp | GAGCGGCAGCCGTGCAGCCGGCTCACGCGGCGCAGCGGGAAGTCCTaGAGCAGCTCCCGGGACAGCGAGTACCGGGCGCCGCCCACGTTC | + |
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Preference number: 6 (lower is better) Translates to: ERQPCSRLTRRSGKS*SSSRDSEYRAPPTF Trigger: GAACGTGGGCGGCGCCCGGTACTCGCTGTCCCGGGAGCTGCTCAAGGACTTCCCGCTGCGCCGCGTGAGCCGGCTGCACGGCTGCCGCTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS GCA 72 bp | CACACTTCGAGCACGTCGCGCTCCGAGCGGCAGCCGTaGAGCCGGCTCACGCGGCGCAGCGGGAAGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: HTSSTSRSERQP*SRLTRRSGKSL Trigger: CAAGGACTTCCCGCTGCGCCGCGTGAGCCGGCTGCACGGCTGCCGCTCGGAGCGCGACGTGCTCGAAGTGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CCA 72 bp | ACACGCTGGCCAGGATCTGCGCGGCCAGCGACGACGTaGGCTCCTCGAAGGTCCGCCGCATGCGCTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TRWPGSARPATT*APRRSAACAPA Trigger: GGCTGGAGCGCATGCGGCGGACCTTCGAGGAGCCCACGTCGTCGCTGGCCGCGCAGATCCTGGCCAGCGTGT 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS GCA 72 bp | TCCGGCGGGACGAGGCTGCTCGCGGCCCAGCTCGTCTaGCGCGTGAAAGGTGTGGGTGTCGGACATGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: SGGTRLLAAQLV*RVKGVGVGHAV Trigger: GACCGCATGTCCGACACCCACACCTTTCACGCGGCAGACGAGCTGGGCCGCGAGCAGCCTCGTCCCGCCGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CAA 90 bp | CTCCCAGGGCTGGCGGAGTACCTGCTCCGGTCATCCAGACTGCGGTaGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTGCTGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: LPGLAEYLLRSSRLR*SATAARQSGSVLAH Trigger: GTGCGCCAGCACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACAACCGCAGTCTGGATGACCGGAGCAGGTACTCCGCCAGCCCTGGGAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051482.2 |
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| CDS CCA 72 bp | AGCTCGCACATCCGCGGCGCGAAGCGCAGCTTCCCGTaGCCGCGCACGTACAGCAGGATGAAGCCGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSHIRGAKRSFP*PRTYSRMKPKA Trigger: GGCCTTCGGCTTCATCCTGCTGTACGTGCGCGGCCACGGGAAGCTGCGCTTCGCGCCGCGGATGTGCGAGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CCA 72 bp | GTGTGGGTGTCGGACATGCGGTCGTCTAGGCGGCGCTaGCAGCAGTACTCCAGGTGCGCACCCTCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VWVSDMRSSRRR*QQYSRCAPSRP Trigger: GGGCCTGGAGGGTGCGCACCTGGAGTACTGCTGCCAGCGCCGCCTAGACGACCGCATGTCCGACACCCACAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS TCA 72 bp | GGACGAGGCTGCTCGCGGCCCAGCTCGTCTGCCGCGTaGAAGGTGTGGGTGTCGGACATGCGGTCGTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: GRGCSRPSSSAA*KVWVSDMRSSR Trigger: CCTAGACGACCGCATGTCCGACACCCACACCTTTCACGCGGCAGACGAGCTGGGCCGCGAGCAGCCTCGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS GCA 72 bp | CAGGGCTGGCGGAGTACCTGCTCCGGTCATCCAGACTaGGGTTGTCAGCAACCGCCGCACGCCAGTCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: QGWRSTCSGHPD*GCQQPPHASRA Trigger: TGCCCGACTGGCGTGCGGCGGTTGCTGACAACCGCAGTCTGGATGACCGGAGCAGGTACTCCGCCAGCCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051482.2 |
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| CDS CAA 72 bp | CTGGCGGAGTACCTGCTCCGGTCATCCAGACTGCGGTaGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LAEYLLRSSRLR*SATAARQSGSV Trigger: CACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACAACCGCAGTCTGGATGACCGGAGCAGGTACTCCGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051482.2 |
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| CDS GCA 72 bp | GGTTGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTaGTGGCGCACAGCACCACCATGGACACGATCACGA | + |
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Preference number: 6 (lower is better) Translates to: GCQQPPHASRAA*WRTAPPWTRSR Trigger: TCGTGATCGTGTCCATGGTGGTGCTGTGCGCCAGCACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS GCA 72 bp | TCCCGGAGGGTTCCCTCCCAGGGCTGGCGGAGTACCTaGTCCGGTCATCCAGACTGCGGTTGTCAGCAACCG | + |
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Preference number: 6 (lower is better) Translates to: SRRVPSQGWRST*SGHPDCGCQQP Trigger: CGGTTGCTGACAACCGCAGTCTGGATGACCGGAGCAGGTACTCCGCCAGCCCTGGGAGGGAACCCTCCGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051482.2 |
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| CDS CCA 72 bp | CCACCATGGACACGATCACGAACACCACGGACACGCTaGCCAGGATCTGCGCGGCCAGCGACGACGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PPWTRSRTPRTR*PGSARPATTWA Trigger: AGCCCACGTCGTCGCTGGCCGCGCAGATCCTGGCCAGCGTGTCCGTGGTGTTCGTGATCGTGTCCATGGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CCA 72 bp | GCCAGTCGGGCAGCGTGCTGGCGCACAGCACCACCATaGACACGATCACGAACACCACGGACACGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ASRAACWRTAPP*TRSRTPRTRWP Trigger: TGGCCAGCGTGTCCGTGGTGTTCGTGATCGTGTCCATGGTGGTGCTGTGCGCCAGCACGCTGCCCGACTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS GCA 72 bp | GCTCGTCTGCCGCGTGAAAGGTGTGGGTGTCGGACATaGGGTCGTCTAGGCGGCGCTGGCAGCAGTACTCCA | + |
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Preference number: 6 (lower is better) Translates to: ARLPRERCGCRT*GRLGGAGSSTP Trigger: TGGAGTACTGCTGCCAGCGCCGCCTAGACGACCGCATGTCCGACACCCACACCTTTCACGCGGCAGACGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CCA 72 bp | TGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTGCTaGCGCACAGCACCACCATGGACACGATCACGAACA | + |
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Preference number: 6 (lower is better) Translates to: CQQPPHASRAAC*RTAPPWTRSRT Trigger: TGTTCGTGATCGTGTCCATGGTGGTGCTGTGCGCCAGCACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CAA 72 bp | GCTTCAATTATCCTGCTCCGGTCATCCAGACTGCGGTaGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: ASIILLRSSRLR*SATAARQSGSV Trigger: CACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACAACCGCAGTCTGGATGACCGGAGCAGGATAATTGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234613.2 |
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| CDS CAA 90 bp | ATGCAGATAGCTTCAATTATCCTGCTCCGGTCATCCAGACTGCGGTaGTCAGCAACCGCCGCACGCCAGTCGGGCAGCGTGCTGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: MQIASIILLRSSRLR*SATAARQSGSVLAH Trigger: GTGCGCCAGCACGCTGCCCGACTGGCGTGCGGCGGTTGCTGACAACCGCAGTCTGGATGACCGGAGCAGGATAATTGAAGCTATCTGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234613.2 |
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| CDS TCA 72 bp | CCCAGAAGATCCGCATCATTCGGAGGACCCTCAAGGTaGCCCCAGCCCTCTGGAGTTGAGAGTTCTCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PRRSASFGGPSR*PQPSGVESSRL Trigger: CAGGCGAGAACTCTCAACTCCAGAGGGCTGGGGTCACCTTGAGGGTCCTCCGAATGATGCGGATCTTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CCA 72 bp | ACCAGCAGGCAGCGGGGATGCTGGCGAAATCCTTGTTaGATGTTTCCAGGTCCAGCCCATGTTCAAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: TSRQRGCWRNPC*MFPGPAHVQGA Trigger: AGCTCCTTGAACATGGGCTGGACCTGGAAACATCCAACAAGGATTTCGCCAGCATCCCCGCTGCCTGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS CAA 90 bp | AGAGTCAAGCCCAGTGTCTGCAGACCAATGAAGTGCCGGGCAAGCTaGATCACCCAGAAGATCCGCATCATTCGGAGGACCCTCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RVKPSVCRPMKCRAS*ITQKIRIIRRTLKV Trigger: CACCTTGAGGGTCCTCCGAATGATGCGGATCTTCTGGGTGATCAAGCTTGCCCGGCACTTCATTGGTCTGCAGACACTGGGCTTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS GCA 72 bp | TTGAGAGTCAAGCCCAGTGTCTGCAGACCAATGAAGTaGCGGGCAAGCTTGATCACCCAGAAGATCCGCATC | + |
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Preference number: 6 (lower is better) Translates to: LRVKPSVCRPMK*RASLITQKIRI Trigger: GATGCGGATCTTCTGGGTGATCAAGCTTGCCCGGCACTTCATTGGTCTGCAGACACTGGGCTTGACTCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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| CDS TCA 72 bp | TTGGATGTTTCCAGGTCCAGCCCATGTTCAAGGAGCTaGGAGAGTGCACTAAAGATTGCCATGGCAACACAG | + |
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Preference number: 6 (lower is better) Translates to: LDVSRSSPCSRS*ESALKIAMATQ Trigger: CTGTGTTGCCATGGCAATCTTTAGTGCACTCTCTCAGCTCCTTGAACATGGGCTGGACCTGGAAACATCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051482.2 ENSMUST00000234613.2 |
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