Pregenerated sensors for KCNG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059852Ensembl transcript IDs: ENSMUST00000077962.8, ENSMUST00000184366.2, ENSMUST00000184574.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTTGGGGAGGCGAGCCAGCTGCAAGGATATGCCAGACCAAGTTTaGCAACTCCTGGGTCAGTTGGCGCTAGGTGTCCTCCGAGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: CLGRRASCKDMPDQV*QLLGQLALGVLRGS Trigger: AGAGCCTCGGAGGACACCTAGCGCCAACTGACCCAGGAGTTGGCAAACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 90 bp | GGGCAAAGTGACACAATTTGGGAAGTTCCATTTCCCTTGCCTCCATaGAGTAGAGAAAGGCTGCACTTCCTCCTGGCGGTGCCCTCATCG | + |
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Preference number: 1 (lower is better) Translates to: GQSDTIWEVPFPLPP*SRERLHFLLAVPSS Trigger: CGATGAGGGCACCGCCAGGAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCAAATTGTGTCACTTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 90 bp | GTGGGGCTCACTGAACCTGTGATCTTCCTGTATCCACTTCCCAAGTaGCACAGTTGCAGGCATATGCCACCACCTGCGGGCTTGTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: VGLTEPVIFLYPLPK*HSCRHMPPPAGLLK Trigger: TTTCAACAAGCCCGCAGGTGGTGGCATATGCCTGCAACTGTGCCACTTGGGAAGTGGATACAGGAAGATCACAGGTTCAGTGAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 90 bp | GGTTACAGTAGATCCTTGCAAAGCCATTGGTGCAAGGGCCCCAAATaGGCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGCTACTA | + |
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Preference number: 1 (lower is better) Translates to: GYSRSLQSHWCKGPK*ACAELTQGPCRKLL Trigger: TAGTAGCTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGCCCATTTGGGGCCCTTGCACCAATGGCTTTGCAAGGATCTACTGTAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR TCA 90 bp | GATGGGGGAGCCTATGACTATCTTGGGTGTAGTGGTGGGGCTCACTaGACCTGTGATCTTCCTGTATCCACTTCCCAAGTGGCACAGTTG | + |
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Preference number: 1 (lower is better) Translates to: DGGAYDYLGCSGGAH*TCDLPVSTSQVAQL Trigger: CAACTGTGCCACTTGGGAAGTGGATACAGGAAGATCACAGGTTCAGTGAGCCCCACCACTACACCCAAGATAGTCATAGGCTCCCCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 90 bp | TTTGGGAAGTTCCATTTCCCTTGCCTCCATGGAGTAGAGAAAGGCTaGACTTCCTCCTGGCGGTGCCCTCATCGTCTTCTCCCTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: FGKFHFPCLHGVEKG*TSSWRCPHRLLPEM Trigger: CATTTCAGGGAGAAGACGATGAGGGCACCGCCAGGAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 90 bp | ACTGAACCTGTGATCTTCCTGTATCCACTTCCCAAGTGGCACAGTTaGAGGCATATGCCACCACCTGCGGGCTTGTTGAAACAGGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: TEPVIFLYPLPKWHS*RHMPPPAGLLKQGK Trigger: TTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGCCTGCAACTGTGCCACTTGGGAAGTGGATACAGGAAGATCACAGGTTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR TCA 90 bp | CACAAGATAGATGCCACCCTCTGTTCCCTGGGGCTTCCAGAGATATaGATCAAAGAAGGGCAAATATTAGTTCAGGGTGGCTGGTATTTG | + |
|
Preference number: 1 (lower is better) Translates to: HKIDATLCSLGLPEI*IKEGQILVQGGWYL Trigger: CAAATACCAGCCACCCTGAACTAATATTTGCCCTTCTTTGATTCATATCTCTGGAAGCCCCAGGGAACAGAGGGTGGCATCTATCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 90 bp | ACCATCTTTTATACAGGGTATTGCCCACTAAGGTCACAAGATAGATaGCACCCTCTGTTCCCTGGGGCTTCCAGAGATATGAATCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: TIFYTGYCPLRSQDR*HPLFPGASRDMNQR Trigger: TCTTTGATTCATATCTCTGGAAGCCCCAGGGAACAGAGGGTGGCATCTATCTTGTGACCTTAGTGGGCAATACCCTGTATAAAAGATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 90 bp | GCTTCCAGAGATATGAATCAAAGAAGGGCAAATATTAGTTCAGGGTaGCTGGTATTTGCTTCAGACTTGGAATTTCTGGGACTCAATTAT | + |
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Preference number: 1 (lower is better) Translates to: ASRDMNQRRANISSG*LVFASDLEFLGLNY Trigger: ATAATTGAGTCCCAGAAATTCCAAGTCTGAAGCAAATACCAGCCACCCTGAACTAATATTTGCCCTTCTTTGATTCATATCTCTGGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CAA 90 bp | TTGCTTGGGGAGGCGAGCCAGCTGCAAGGATATGCCAGACCAAGTTaGCCAACTCCTGGGTCAGTTGGCGCTAGGTGTCCTCCGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLGEASQLQGYARPS*PTPGSVGARCPPRL Trigger: GAGCCTCGGAGGACACCTAGCGCCAACTGACCCAGGAGTTGGCAAACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CAA 90 bp | AAAGACCAGGTTGCTATATCCTCCAGGCTATGCGAAGCTCGGGAATaGCTTGGGGAGGCGAGCCAGCTGCAAGGATATGCCAGACCAAGT | + |
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Preference number: 2 (lower is better) Translates to: KDQVAISSRLCEARE*LGEASQLQGYARPS Trigger: ACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCATAGCCTGGAGGATATAGCAACCTGGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR GCA 90 bp | GCATATGCCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGGGAGTAGAGAAAGGCTaGACTTCCTCCTGGCGGTGC | + |
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Preference number: 2 (lower is better) Translates to: AYATTCGLVETGQSDTIWGVEKG*TSSWRC Trigger: GCACCGCCAGGAGGAAGTGCAGCCTTTCTCTACTCC...CCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGGAGGGCAGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGATGTGGACGATGGCAGTaGCAGATGCCAGGTGACACC | + |
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Preference number: 2 (lower is better) Translates to: TREGRKRVKRPQCKRSDRCGRWQ*QMPGDT Trigger: GGTGTCACCTGGCATCTGTCACTGCCATCGTCCACA...TCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCTGCCCTCCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGGAAGTTCGACACCAACATCCCCTaGAGACAGGTGACCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PPPAGLLKQGKVTQFGKFDTNIP*RQVTFL Trigger: CAGGAAGGTCACCTGTCTCCAGGGGATGTTGGTGTC...GAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CAA 90 bp | CCCAAGTGGCACAGTTGCAGGCATATGCCACCACCTGCGGGCTTGTaGAAACAGGGCAAAGTGACACAATTTGGGAAGTTCCATTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PKWHSCRHMPPPAGL*KQGKVTQFGKFHFP Trigger: AGGGAAATGGAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGCCTGCAACTGTGCCACTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR CCA 90 bp | GCATATGCCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGCCACCCTCTGTTCCCTaGGGCTTCCAGAGATATGAA | + |
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Preference number: 2 (lower is better) Translates to: AYATTCGLVETGQSDTIWPPSVP*GFQRYE Trigger: TTCATATCTCTGGAAGCCCCAGGGAACAGAGGGTGG...CCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR CCA 90 bp | GCATATGCCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGTCCCCATGCAATGAGTaGATAGGCAGAACTAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: AYATTCGLVETGQSDTIWSPCNE*IGRTRG Trigger: CCCCCTAGTTCTGCCTATCCACTCATTGCATGGGGA...CCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CAA 90 bp | GTTGAAACAGGGCAAAGTGACACAATTTGGGAAGTTCCATTTCCCTaGCCTCCATGGAGTAGAGAAAGGCTGCACTTCCTCCTGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: VETGQSDTIWEVPFP*PPWSRERLHFLLAV Trigger: CACCGCCAGGAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGCTACTATGTAGTAGGCAAACAGAGGTCAACTCCTaGGATTTCTTTCCCCATGCA | + |
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Preference number: 2 (lower is better) Translates to: ACAELTQGPCRKLLCSRQTEVNS*DFFPHA Trigger: TGCATGGGGAAAGAAATCTCAGGAGTTGACCTCTGT...TTGCCTACTACATAGTAGCTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGGGCCCCAAATGGGCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGTATTTGCTTCAGACTTaGAATTTCTGGGACTCAATT | + |
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Preference number: 2 (lower is better) Translates to: CKGPKWACAELTQGPCRKYLLQT*NFWDSI Trigger: AATTGAGTCCCAGAAATTCCAAGTCTGAAGCAAATA...CTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGCCCATTTGGGGCCCTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGGAAGTTCGGGCTTCCAGAGATATaGATCAAAGAAGGGCAAATA | + |
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Preference number: 2 (lower is better) Translates to: PPPAGLLKQGKVTQFGKFGLPEI*IKEGQI Trigger: TATTTGCCCTTCTTTGATTCATATCTCTGGAAGCCC...GAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAGTTCCATTTCCCTTGCCTCCATGGAGTAGAGAAAGGCTGCACTTCCTCAGGGTGGCTGGTATTTaGTTCAGACTTGGAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: WEVPFPLPPWSRERLHFLRVAGI*FRLGIS Trigger: AGAAATTCCAAGTCTGAAGCAAATACCAGCCACCCT...GAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGGAAGTTCCATTTCGATGGCAGTGACAGATaGCAGGTGACACCATCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PAGLLKQGKVTQFGKFHFDGSDR*QVTPSF Trigger: AAAAGATGGTGTCACCTGGCATCTGTCACTGCCATC...GAAATGGAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGAGACGGTCTGGGGAAAGAAAGACCAGGTTaGTATATCCTCCAGGCTATG | + |
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Preference number: 2 (lower is better) Translates to: RKRVKRPQCKRSDRDGLGKERPG*YILQAM Trigger: CATAGCCTGGAGGATATAGCAACCTGGTCTTTCTTT...CCCCAGACCGTCTCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGGAGGGCAGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGAAGATTTCTTTCCCCATaGAATGAGTGGATAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: TREGRKRVKRPQCKRSDRRFLSP*NEWIGR Trigger: TCTGCCTATCCACTCATTGCATGGGGAAAGAAATCT...TCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCTGCCCTCCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAAGGGCCCCAAATGGGCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGCCACCTGCGGGCTTGTaGAAACAGGGCAAAGTGACA | + |
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Preference number: 3 (lower is better) Translates to: CKGPKWACAELTQGPCRKPPAGL*KQGKVT Trigger: TGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGG...CTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGCCCATTTGGGGCCCTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR TCA 72 bp | CACTTCCTCCTGGCGGTGCCCTCATCGTCTTCTCCCTaGAATGCCTTTTCACCCCACCAGGCTGTTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: HFLLAVPSSSSP*NAFSPHQAVQG Trigger: GCCTTGAACAGCCTGGTGGGGTGAAAAGGCATTTCAGGGAGAAGACGATGAGGGCACCGCCAGGAGGAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | AGGCGAGCCAGCTGCAAGGATATGCCAGACCAAGTTTaGCAACTCCTGGGTCAGTTGGCGCTAGGTGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: RRASCKDMPDQV*QLLGQLALGVL Trigger: GAGGACACCTAGCGCCAACTGACCCAGGAGTTGGCAAACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | GCGAAGCTCGGGAATTGCTTGGGGAGGCGAGCCAGCTaGAAGGATATGCCAGACCAAGTTTGCCAACTCCTG | + |
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Preference number: 3 (lower is better) Translates to: AKLGNCLGRRAS*KDMPDQVCQLL Trigger: CAGGAGTTGGCAAACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 72 bp | AGATCCTTGCAAAGCCATTGGTGCAAGGGCCCCAAATaGGCTTGTGCTGAGCTCACACAGGGCCCTTGCCGA | + |
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Preference number: 3 (lower is better) Translates to: RSLQSHWCKGPK*ACAELTQGPCR Trigger: TCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGCCCATTTGGGGCCCTTGCACCAATGGCTTTGCAAGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | GGAATTGCTTGGGGAGGCGAGCCAGCTGCAAGGATATaGCAGACCAAGTTTGCCAACTCCTGGGTCAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: GIAWGGEPAARI*QTKFANSWVSW Trigger: CCAACTGACCCAGGAGTTGGCAAACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 72 bp | TATATCCTCCAGGCTATGCGAAGCTCGGGAATTGCTTaGGGAGGCGAGCCAGCTGCAAGGATATGCCAGACC | + |
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Preference number: 3 (lower is better) Translates to: YILQAMRSSGIA*GGEPAARICQT Trigger: GGTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCATAGCCTGGAGGATATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 72 bp | TGCCTCCATGGAGTAGAGAAAGGCTGCACTTCCTCCTaGCGGTGCCCTCATCGTCTTCTCCCTGAAATGCCT | + |
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Preference number: 3 (lower is better) Translates to: CLHGVEKGCTSS*RCPHRLLPEMP Trigger: AGGCATTTCAGGGAGAAGACGATGAGGGCACCGCCAGGAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAGGGAGGGCAGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGAAAGCTCGGGAATTGCTaGGGGAGGCGAGCCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TREGRKRVKRPQCKRSDRKLGNC*GRRASC Trigger: GCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTT...TCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCTGCCCTCCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGAGACGGTCTGGGGTGCGAAGCTCGGGAATaGCTTGGGGAGGCGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: RKRVKRPQCKRSDRDGLGCEARE*LGEASQ Trigger: CTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCA...CCCCAGACCGTCTCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | TTGCTATATCCTCCAGGCTATGCGAAGCTCGGGAATTaGTTGGGGAGGCGAGCCAGCTGCAAGGATATGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLYPPGYAKLGN*LGRRASCKDMP Trigger: TGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCATAGCCTGGAGGATATAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | TTCCATTTCCCTTGCCTCCATGGAGTAGAGAAAGGCTaGACTTCCTCCTGGCGGTGCCCTCATCGTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: FHFPCLHGVEKG*TSSWRCPHRLL Trigger: GAGAAGACGATGAGGGCACCGCCAGGAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 72 bp | ACTGAACCTGTGATCTTCCTGTATCCACTTCCCAAGTaGCACAGTTGCAGGCATATGCCACCACCTGCGGGC | + |
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Preference number: 3 (lower is better) Translates to: TEPVIFLYPLPK*HSCRHMPPPAG Trigger: GCCCGCAGGTGGTGGCATATGCCTGCAACTGTGCCACTTGGGAAGTGGATACAGGAAGATCACAGGTTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | AAAAAGAAAGACCAGGTTGCTATATCCTCCAGGCTATaGGAAGCTCGGGAATTGCTTGGGGAGGCGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: KKKDQVAISSRL*EARELLGEASQ Trigger: CTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCATAGCCTGGAGGATATAGCAACCTGGTCTTTCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | TCCCAAGTGGCACAGTTGCAGGCATATGCCACCACCTaGGGGCTTGTTGAAACAGGGCAAAGTGACACAATT | + |
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Preference number: 3 (lower is better) Translates to: SQVAQLQAYATT*GLVETGQSDTI Trigger: AATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGCCTGCAACTGTGCCACTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | GTGATCTTCCTGTATCCACTTCCCAAGTGGCACAGTTaGAGGCATATGCCACCACCTGCGGGCTTGTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: VIFLYPLPKWHS*RHMPPPAGLLK Trigger: TTTCAACAAGCCCGCAGGTGGTGGCATATGCCTGCAACTGTGCCACTTGGGAAGTGGATACAGGAAGATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 72 bp | GACACAATTTGGGAAGTTCCATTTCCCTTGCCTCCATaGAGTAGAGAAAGGCTGCACTTCCTCCTGGCGGTG | + |
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Preference number: 3 (lower is better) Translates to: DTIWEVPFPLPP*SRERLHFLLAV Trigger: CACCGCCAGGAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCAAATTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR-3UTR CAA 90 bp | CCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGGAAGTTCTGTCCTCCGAGGCTCTaGACTCTCTTGAAGTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: PPPAGLLKQGKVTQFGKFCPPRL*TLLKFS Trigger: TGAGAACTTCAAGAGAGTCAAGAGCCTCGGAGGACA...GAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR TCA 72 bp | GCCTATGACTATCTTGGGTGTAGTGGTGGGGCTCACTaGACCTGTGATCTTCCTGTATCCACTTCCCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: AYDYLGCSGGAH*TCDLPVSTSQV Trigger: CACTTGGGAAGTGGATACAGGAAGATCACAGGTTCAGTGAGCCCCACCACTACACCCAAGATAGTCATAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR TCA 72 bp | GATGCCACCCTCTGTTCCCTGGGGCTTCCAGAGATATaGATCAAAGAAGGGCAAATATTAGTTCAGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: DATLCSLGLPEI*IKEGQILVQGG Trigger: GCCACCCTGAACTAATATTTGCCCTTCTTTGATTCATATCTCTGGAAGCCCCAGGGAACAGAGGGTGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR GCA 72 bp | TATACAGGGTATTGCCCACTAAGGTCACAAGATAGATaGCACCCTCTGTTCCCTGGGGCTTCCAGAGATATG | + |
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Preference number: 3 (lower is better) Translates to: YTGYCPLRSQDR*HPLFPGASRDM Trigger: CATATCTCTGGAAGCCCCAGGGAACAGAGGGTGGCATCTATCTTGTGACCTTAGTGGGCAATACCCTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| 3UTR CCA 72 bp | AAAGGCCACAATGCAAGCGATCTGATAGAGACGGTCTaGGGGGAACAGAGGTCAACTCCTGAGATTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KGHNASDLIETV*GEQRSTPEISF Trigger: GAAAGAAATCTCAGGAGTTGACCTCTGTTCCCCCCAGACCGTCTCTATCAGATCGCTTGCATTGTGGCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR TCA 72 bp | CAAGTGATGTGGACGATGGCAGTGACAGATGCCAGGTaGCACCATCTTTTATACAGGGTATTGCCCACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: QVMWTMAVTDAR*HHLLYRVLPTK Trigger: CTTAGTGGGCAATACCCTGTATAAAAGATGGTGTCACCTGGCATCTGTCACTGCCATCGTCCACATCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CCA 72 bp | TGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTaGGAAGTTCCATTTCCCTTGCCTCCATGGAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CGLVETGQSDTI*EVPFPLPPWSR Trigger: TCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGAGACGGTCTGGAAAAGAAAGACCAGGTaGCTATATCCTCCAGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: AGKGLKGHNASDLIETVWKRKTR*LYPPGY Trigger: ATAGCCTGGAGGATATAGCAACCTGGTCTTTCTTTT...CCAGACCGTCTCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CCA 72 bp | TTTTTATTTGGTTACAGTAGATCCTTGCAAAGCCATTaGTGCAAGGGCCCCAAATGGGCTTGTGCTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLFGYSRSLQSH*CKGPKWACAEL Trigger: GAGCTCAGCACAAGCCCATTTGGGGCCCTTGCACCAATGGCTTTGCAAGGATCTACTGTAACCAAATAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CCA 72 bp | GATATGAATCAAAGAAGGGCAAATATTAGTTCAGGGTaGCTGGTATTTGCTTCAGACTTGGAATTTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DMNQRRANISSG*LVFASDLEFLG Trigger: TCCCAGAAATTCCAAGTCTGAAGCAAATACCAGCCACCCTGAACTAATATTTGCCCTTCTTTGATTCATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTATGCGAAGCTCGGGAATTGCTTGGGGAGGCGAGCCAGCTGCAAGGATCTCAGCGCCACCACCTaGCCCGGAAGGCTGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGYAKLGNCLGRRASCKDLSATT*PGRLRG Trigger: GCCGCGCAGCCTTCCGGGCCAGGTGGTGGCGCTGAG...ATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCATAGCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAGGGCCCCAAATGGGCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGCCCGCCAGCCCGGAGTaGGGGTTCTCCACCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CKGPKWACAELTQGPCRKPASPE*GFSTTS Trigger: CGACGTGGTGGAGAACCCGCACTCCGGGCTGGCGGG...CTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGCCCATTTGGGGCCCTTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTTGGGGAGGCGAGCCAGCTGCAAGGATATGCCAGACCAAGTTTGCCAACTCGCAGCGGCGCACGGTaGGGCCAAGCGAGCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGEASQLQGYARPSLPTRSGAR*GQASAA Trigger: GGCTGCGCTCGCTTGGCCTCACCGTGCGCCGCTGCG...AGTTGGCAAACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTTGGGGAGGCGAGCCAGCTGCAAGGATATGCCAGACCAAGTTTGCCAACTGGGCCGGTTCAGGGCTaGCCGCGCGCTGTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGEASQLQGYARPSLPTGPVQG*PRAVAA Trigger: AGCAGCAACAGCGCGCGGCCAGCCCTGAACCGGCCC...AGTTGGCAAACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGCTACTATGTAGTAGGCTGGAGAAGTCGCGGTaGGCGCCCAGCTCGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WACAELTQGPCRKLLCSRLEKSR*APSSRS Trigger: TGAGCGCGAGCTGGGCGCTCACCGCGACTTCTCCAG...CCTACTACATAGTAGCTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CCA 90 bp | CCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGGAAGTTCCGCAGCAGCTCGTCGTaGCCGCGGCAGGCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPPAGLLKQGKVTQFGKFRSSSS*PRQARR Trigger: CCTGCGAGCCTGCCGCGGCCACGACGAGCTGCTGCG...GAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR TCA 90 bp | CATATGCCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGGACAGGCCGACGGCTGTaGCGGCCACGAAGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: HMPPPAGLLKQGKVTQFGTGRRL*RPRRPR Trigger: CCGTGGCCTTCGTGGCCGTCACAGCCGTCGGCCTGT...CCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGTTCCATTTCCCTTGCCTCCATGGAGTAGAGAAAGGCTGCACTTCCTCGCAGCAGCGCCACGATaGCGCGGAAAGCGCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WEVPFPLPPWSRERLHFLAAAPR*RGKRTG Trigger: GCCCGTGCGCTTTCCGCGCCATCGTGGCGCTGCTGC...GAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGCTACTATGTAGTAGGCAAGCGGTCTCAGGGTCCTaGGAGCTGTCCTCAGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ACAELTQGPCRKLLCSRQAVSGS*ELSSVA Trigger: CGCCACTGAGGACAGCTCTCAGGACCCTGAGACCGC...TTGCCTACTACATAGTAGCTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | GCCGAAAGCTACTATGTAGTAGGCAATGGTGGTAGCCTGCAGATAGAGGACCTTCGTAGGCGAAGAGCCTaGCCGCCAGCCCGGAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: AESYYVVGNGGSLQIEDLRRRRA*PPARSA Trigger: CGCACTCCGGGCTGGCGGGCAGGCTCTTCGCCTACG...AAGGTCCTCTATCTGCAGGCTACCACCATTGCCTACTACATAGTAGCTTTCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGTTCCATTTCCCTTGCCTCCATGGAGTAGAGAAAGGCTGCACTTCCTCGGACGTCCGGCATGGTaGTCAGGCACAGGCCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: WEVPFPLPPWSRERLHFLGRPAW*SGTGRR Trigger: CCGTCGGCCTGTGCCTGAGCACCATGCCGGACGTCC...GAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGTTCCATTTCCCTTGCCTCCATGGAGTAGAGAAAGGCTGCACTTCCTCTCGCGCTCAGCCAGGTaGACGAGCGGCGCGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WEVPFPLPPWSRERLHFLSRSAR*TSGAKS Trigger: GCTCTTCGCGCCGCTCGTGCACCTGGCTGAGCGCGA...GAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCATATGCCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTCGCGGACGTCCGGCATaGTGCTCAGGCACAGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QAYATTCGLVETGQSDTIRGRPA*CSGTGR Trigger: TCGGCCTGTGCCTGAGCACCATGCCGGACGTCCGCG...AATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGCTACTATGTAGTAGGCAAGGAGGAAGGCGCACTTaGTCTCAGCCTGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACAELTQGPCRKLLCSRQGGRRT*SQPAGS Trigger: GCTCCCTGCAGGCTGAGAGCAAGTGCGCCTTCCTCC...TTGCCTACTACATAGTAGCTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGGAGGGCAGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGAAGCTGGCGGGGACGCTaGAGAAGTCGCGGTGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TREGRKRVKRPQCKRSDRSWRGR*RSRGER Trigger: GCGCTCACCGCGACTTCTCCAGCGTCCCCGCCAGCT...TCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCTGCCCTCCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CAA 72 bp | GAGGCGAGCCAGCTGCAAGGATATGCCAGACCAAGTTaGCCAACTCCTGGGTCAGTTGGCGCTAGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EASQLQGYARPS*PTPGSVGARCP Trigger: AGGACACCTAGCGCCAACTGACCCAGGAGTTGGCAAACTTGGTCTGGCATATCCTTGCAGCTGGCTCGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | GCCGAAAGCTACTATGTAGTAGGCAATGGTGGTAGCCTGCAGATAGAGGACCTTGCCCCGTTCCTCTTCTaGGCGGACGTCCGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AESYYVVGNGGSLQIEDLAPFLF*ADVRHG Trigger: ACCATGCCGGACGTCCGCGCAGAAGAGGAACGGGGC...AAGGTCCTCTATCTGCAGGCTACCACCATTGCCTACTACATAGTAGCTTTCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CAA 72 bp | CTATATCCTCCAGGCTATGCGAAGCTCGGGAATTGCTaGGGGAGGCGAGCCAGCTGCAAGGATATGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYPPGYAKLGNC*GRRASCKDMPD Trigger: GTCTGGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCATAGCCTGGAGGATATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CAA 72 bp | GTTGCTATATCCTCCAGGCTATGCGAAGCTCGGGAATaGCTTGGGGAGGCGAGCCAGCTGCAAGGATATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAISSRLCEARE*LGEASQLQGYA Trigger: GGCATATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCATAGCCTGGAGGATATAGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGTTCCATTTCCCTTGCCTCCATGGAGTAGAGAAAGGCTGCACTTCCTCGCTGTTGCTGCTCCTTaGGCTCCGAATAGGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: WEVPFPLPPWSRERLHFLAVAAP*APNRSA Trigger: CGCGCTCCTATTCGGAGCTCAAGGAGCAGCAACAGC...GAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCATATGCCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTGGTTGCGGCACTTTGTaGAGCACTCGCCCCGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAYATTCGLVETGQSDTIGCGTL*STRPVP Trigger: AGGAACGGGGCGAGTGCTCCACAAAGTGCCGCAACC...AATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGAGACGGTCTGGCACTTGCTCTCAGCCTaGAGGGAGCGCAGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGKGLKGHNASDLIETVWHLLSA*RERSRN Trigger: GTTCCTGCTGCGCTCCCTGCAGGCTGAGAGCAAGTG...CCAGACCGTCTCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | CACCCTCTGTTCCCTGGGGCTTCCAGAGATATGAATCAAAGAAGGGCAAATATTCTGGCCGCGCGCTGTTaGTGCTCCTTGAGCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPLFPGASRDMNQRRANILAARC*CSLSSE Trigger: TTCGGAGCTCAAGGAGCAGCAACAGCGCGCGGCCAG...AATATTTGCCCTTCTTTGATTCATATCTCTGGAAGCCCCAGGGAACAGAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CAA 72 bp | TGGCACAGTTGCAGGCATATGCCACCACCTGCGGGCTaGTTGAAACAGGGCAAAGTGACACAATTTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WHSCRHMPPPAG*LKQGKVTQFGK Trigger: CTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGCCTGCAACTGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CAA 72 bp | TGTGATCTTCCTGTATCCACTTCCCAAGTGGCACAGTaGCAGGCATATGCCACCACCTGCGGGCTTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CDLPVSTSQVAQ*QAYATTCGLVE Trigger: TTCAACAAGCCCGCAGGTGGTGGCATATGCCTGCAACTGTGCCACTTGGGAAGTGGATACAGGAAGATCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CAA 72 bp | CACAGTTGCAGGCATATGCCACCACCTGCGGGCTTGTaGAAACAGGGCAAAGTGACACAATTTGGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSCRHMPPPAGL*KQGKVTQFGKF Trigger: GAACTTCCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATGCCTGCAACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR GCA 90 bp | CACCCTCTGTTCCCTGGGGCTTCCAGAGATATGAATCAAAGAAGGGCAAATATTCCAGCACGAACAGGTTaGGGCACTTTGTGGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HPLFPGASRDMNQRRANIPARTG*GTLWST Trigger: AGTGCTCCACAAAGTGCCGCAACCTGTTCGTGCTGG...AATATTTGCCCTTCTTTGATTCATATCTCTGGAAGCCCCAGGGAACAGAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CAA 72 bp | GGGCAAAGTGACACAATTTGGGAAGTTCCATTTCCCTaGCCTCCATGGAGTAGAGAAAGGCTGCACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQSDTIWEVPFP*PPWSRERLHFL Trigger: GAGGAAGTGCAGCCTTTCTCTACTCCATGGAGGCAAGGGAAATGGAACTTCCCAAATTGTGTCACTTTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| 3UTR CAA 72 bp | AAAGAAGGGCAAATATTAGTTCAGGGTGGCTGGTATTaGCTTCAGACTTGGAATTTCTGGGACTCAATTATT | + |
|
Preference number: 4 (lower is better) Translates to: KEGQILVQGGWY*LQTWNFWDSII Trigger: AATAATTGAGTCCCAGAAATTCCAAGTCTGAAGCAAATACCAGCCACCCTGAACTAATATTTGCCCTTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS CCA 90 bp | GCAGCCGCAGCACCAGACCCGCGCGCTCCAGCATCTTGCTGCCCGTaGGCCCTGCCGCCAGTCCCGCGAGCAGCGACACGTAGAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAAPDPRAPASCCP*ALPPVPRAATRRRA Trigger: TGCCCTTCTACGTGTCGCTGCTCGCGGGACTGGCGGCAGGGCCCACGGGCAGCAAGATGCTGGAGCGCGCGGGTCTGGTGCTGCGGCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS GCA 90 bp | CAGCACCAGACCCGCGCGCTCCAGCATCTTGCTGCCCGTGGGCCCTaGCGCCAGTCCCGCGAGCAGCGACACGTAGAAGGGCAGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QHQTRALQHLAARGP*RQSREQRHVEGQDG Trigger: GCCATCCTGCCCTTCTACGTGTCGCTGCTCGCGGGACTGGCGGCAGGGCCCACGGGCAGCAAGATGCTGGAGCGCGCGGGTCTGGTGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS GCA 90 bp | AGCTGTCCTCAGTGGCGCTGGCCGAACGTGTACTGTCATCACGCGTaGTGTCCTCGCGCAGGGCCGGTTCAGGGCTGGCCGCGCGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SCPQWRWPNVYCHHA*CPRAGPVQGWPRAV Trigger: AACAGCGCGCGGCCAGCCCTGAACCGGCCCTGCGCGAGGACAGCACGCGTGATGACAGTACACGTTCGGCCAGCGCCACTGAGGACAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS CCA 90 bp | CCGCGCCTGCGGTCTCAGGGTCCTGAGAGCTGTCCTCAGTGGCGCTaGCCGAACGTGTACTGTCATCACGCGTGCTGTCCTCGCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRLRSQGPESCPQWR*PNVYCHHACCPRAG Trigger: CCCTGCGCGAGGACAGCACGCGTGATGACAGTACACGTTCGGCCAGCGCCACTGAGGACAGCTCTCAGGACCCTGAGACCGCAGGCGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS CCA 90 bp | TCCCTGCCGCGCCTGCGGTCTCAGGGTCCTGAGAGCTGTCCTCAGTaGCGCTGGCCGAACGTGTACTGTCATCACGCGTGCTGTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPRLRSQGPESCPQ*RWPNVYCHHACCPR Trigger: GCGAGGACAGCACGCGTGATGACAGTACACGTTCGGCCAGCGCCACTGAGGACAGCTCTCAGGACCCTGAGACCGCAGGCGCGGCAGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAGGGCCCCAAATGGGCTTGTGCTGAGCTCACACAGGGCCCTTGCCGAAAGACAGGTTGCGGCACTTaGTGGAGCACTCGCCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: CKGPKWACAELTQGPCRKTGCGT*WSTRPV Trigger: AACGGGGCGAGTGCTCCACAAAGTGCCGCAACCTGT...CTTTCGGCAAGGGCCCTGTGTGAGCTCAGCACAAGCCCATTTGGGGCCCTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CAA 90 bp | CATATGCCACCACCTGCGGGCTTGTTGAAACAGGGCAAAGTGACACAATTTGGGGCGCGCTCCAGCATCTaGCTGCCCGTGGGCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HMPPPAGLLKQGKVTQFGARSSI*LPVGPA Trigger: GGCAGGGCCCACGGGCAGCAAGATGCTGGAGCGCGC...CCCAAATTGTGTCACTTTGCCCTGTTTCAACAAGCCCGCAGGTGGTGGCATATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTATGCGAAGCTCGGGAATTGCTTGGGGAGGCGAGCCAGCTGCAAGGATTCCAGCACGAACAGGTaGCGGCACTTTGTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGYAKLGNCLGRRASCKDSSTNR*RHFVEH Trigger: GTGCTCCACAAAGTGCCGCAACCTGTTCGTGCTGGA...ATCCTTGCAGCTGGCTCGCCTCCCCAAGCAATTCCCGAGCTTCGCATAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAAAGGGTTAAAAGGCCACAATGCAAGCGATCTGATAGAGACGGTCTGGGGCGGAGGAAGGCGCACTaGCTCTCAGCCTGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKRVKRPQCKRSDRDGLGRRKAH*LSACRE Trigger: CTCCCTGCAGGCTGAGAGCAAGTGCGCCTTCCTCCG...CCCCAGACCGTCTCTATCAGATCGCTTGCATTGTGGCCTTTTAACCCTTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS CAA 72 bp | GCGGCCCAGGCCAGACGCACCCTGCAGCCCCCGACGTaGATAATGACGTGGCGCGCCCGGGCCCCGCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AAQARRTLQPPT*IMTWRARAPRP Trigger: CGGCCGCGGGGCCCGGGCGCGCCACGTCATTATCAACGTCGGGGGCTGCAGGGTGCGTCTGGCCTGGGCCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077962.8 ENSMUST00000184366.2 ENSMUST00000184574.2 |
||
| CDS GCA 72 bp | GCAGCCGCAGCACCAGACCCGCGCGCTCCAGCATCTTaGTGCCCGTGGGCCCTGCCGCCAGTCCCGCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAAAPDPRAPAS*CPWALPPVPRA Trigger: TGCTCGCGGGACTGGCGGCAGGGCCCACGGGCAGCAAGATGCTGGAGCGCGCGGGTCTGGTGCTGCGGCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS CAA 72 bp | AGCAGCCGCAGCACCAGACCCGCGCGCTCCAGCATCTaGCTGCCCGTGGGCCCTGCCGCCAGTCCCGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSTRPARSSI*LPVGPAASPAS Trigger: GCTCGCGGGACTGGCGGCAGGGCCCACGGGCAGCAAGATGCTGGAGCGCGCGGGTCTGGTGCTGCGGCTGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS GCA 72 bp | GGGTCCCACCCGGCCCGGCAAGCTCCCTGCCGCGCCTaGGGTCTCAGGGTCCTGAGAGCTGTCCTCAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSHPARQAPCRA*GLRVLRAVLSG Trigger: GCCACTGAGGACAGCTCTCAGGACCCTGAGACCGCAGGCGCGGCAGGGAGCTTGCCGGGCCGGGTGGGACCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
||
| CDS CCA 72 bp | GCACCAGACCCGCGCGCTCCAGCATCTTGCTGCCCGTaGGCCCTGCCGCCAGTCCCGCGAGCAGCGACACGT | + |
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Preference number: 6 (lower is better) Translates to: APDPRAPASCCP*ALPPVPRAATR Trigger: ACGTGTCGCTGCTCGCGGGACTGGCGGCAGGGCCCACGGGCAGCAAGATGCTGGAGCGCGCGGGTCTGGTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| CDS GCA 72 bp | ACCCGCGCGCTCCAGCATCTTGCTGCCCGTGGGCCCTaGCGCCAGTCCCGCGAGCAGCGACACGTAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: TRALQHLAARGP*RQSREQRHVEG Trigger: CCCTTCTACGTGTCGCTGCTCGCGGGACTGGCGGCAGGGCCCACGGGCAGCAAGATGCTGGAGCGCGCGGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| CDS GCA 72 bp | CGGCCACGAAGGCCACGGAGACGTAGGCGAAGAGCCTaGCCGCCAGCCCGGAGTGCGGGTTCTCCACCACGT | + |
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Preference number: 6 (lower is better) Translates to: RPRRPRRRRRRA*PPARSAGSPPR Trigger: ACGTGGTGGAGAACCCGCACTCCGGGCTGGCGGGCAGGCTCTTCGCCTACGTCTCCGTGGCCTTCGTGGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| CDS GCA 72 bp | GCGGCACTTTGTGGAGCACTCGCCCCGTTCCTCTTCTaGGCGGACGTCCGGCATGGTGCTCAGGCACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: AALCGALAPFLF*ADVRHGAQAQA Trigger: GGCCTGTGCCTGAGCACCATGCCGGACGTCCGCGCAGAAGAGGAACGGGGCGAGTGCTCCACAAAGTGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| CDS CAA 72 bp | CGCACACCGTCTCCAGCACGAACAGGTTGCGGCACTTaGTGGAGCACTCGCCCCGTTCCTCTTCTGCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: RTPSPARTGCGT*WSTRPVPLLRG Trigger: TCCGCGCAGAAGAGGAACGGGGCGAGTGCTCCACAAAGTGCCGCAACCTGTTCGTGCTGGAGACGGTGTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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| CDS CCA 72 bp | ACACCGTCTCCAGCACGAACAGGTTGCGGCACTTTGTaGAGCACTCGCCCCGTTCCTCTTCTGCGCGGACGT | + |
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Preference number: 6 (lower is better) Translates to: TPSPARTGCGTL*STRPVPLLRGR Trigger: ACGTCCGCGCAGAAGAGGAACGGGGCGAGTGCTCCACAAAGTGCCGCAACCTGTTCGTGCTGGAGACGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077962.8 |
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