Pregenerated sensors for KCNF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051726Ensembl transcript IDs: ENSMUST00000170580.3
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCATGCCAGGCCATCTGATAGCCCAAAGTGGCCCTGTGGCTCCTaGACTCCCCAGGTCCCCTGTACCTGGACAGCTGGCACCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: AHARPSDSPKWPCGS*TPQVPCTWTAGTQG Trigger: TCCTTGGGTGCCAGCTGTCCAGGTACAGGGGACCTGGGGAGTGCAGGAGCCACAGGGCCACTTTGGGCTATCAGATGGCCTGGCATGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 90 bp | TCCCTCTGGAGCTGCACACCTCCTTCCTGGCCTGGCACTAGGGTGTaGAGTAGTCACTCTTGGGGTAACCAGCCTGAGACAACCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: SLWSCTPPSWPGTRV*SSHSWGNQPETTHS Trigger: GCTGTGGGTTGTCTCAGGCTGGTTACCCCAAGAGTGACTACTGCACACCCTAGTGCCAGGCCAGGAAGGAGGTGTGCAGCTCCAGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 90 bp | GGACAGCTGGCACCCAAGGAGTCTTACCCAGTCTTGGCAAAGGTCTaGTCAGGGGAGGGCTGGAAGACACAAGCAGCTCCTCTGAAACCA | + |
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Preference number: 1 (lower is better) Translates to: GQLAPKESYPVLAKV*SGEGWKTQAAPLKP Trigger: TGGTTTCAGAGGAGCTGCTTGTGTCTTCCAGCCCTCCCCTGAGCAGACCTTTGCCAAGACTGGGTAAGACTCCTTGGGTGCCAGCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CCA 90 bp | AGCTCCTCTGAAACCACAGACGTGCCTACTGACATGTCTACCCAATaGTTTGTCCATCCACAGCCCAGTCCGTCCCTGCCAGGGAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: SSSETTDVPTDMSTQ*FVHPQPSPSLPGSP Trigger: TGGACTCCCTGGCAGGGACGGACTGGGCTGTGGATGGACAAACCATTGGGTAGACATGTCAGTAGGCACGTCTGTGGTTTCAGAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 90 bp | GGGGAGGGCTGGAAGACACAAGCAGCTCCTCTGAAACCACAGACGTaGCTACTGACATGTCTACCCAATGGTTTGTCCATCCACAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: GEGWKTQAAPLKPQT*LLTCLPNGLSIHSP Trigger: TGGGCTGTGGATGGACAAACCATTGGGTAGACATGTCAGTAGGCACGTCTGTGGTTTCAGAGGAGCTGCTTGTGTCTTCCAGCCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CCA 90 bp | ACTATCAGTCACTCAGTCCCCCTGGGACCAGTGGATCCTAGACTATaGAGATCTCACAGATGGCTCACTTCTCTGGGCTTGGTCTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: TISHSVPLGPVDPRL*RSHRWLTSLGLVFY Trigger: ATAGAAGACCAAGCCCAGAGAAGTGAGCCATCTGTGAGATCTCCATAGTCTAGGATCCACTGGTCCCAGGGGGACTGAGTGACTGATAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR TCA 90 bp | GAAGCAGGAGAGTGTCTCCTGGAATGTGGCAAGGCGCCTTGGAGCTaGACCTTGCCTTGCAGCCCTTCTTTAATTAGCTCTCAACTAAAA | + |
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Preference number: 1 (lower is better) Translates to: EAGECLLECGKAPWS*TLPCSPSLISSQLK Trigger: TTTTAGTTGAGAGCTAATTAAAGAAGGGCTGCAAGGCAAGGTTCAGCTCCAAGGCGCCTTGCCACATTCCAGGAGACACTCTCCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR TCA 90 bp | AGATCTCACAGATGGCTCACTTCTCTGGGCTTGGTCTTCTATTCCTaGACGAGCAGCAAAAAGATACTTTGGATCTCTGAGTATTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: RSHRWLTSLGLVFYS*TSSKKILWISEYSS Trigger: GGAAGAATACTCAGAGATCCAAAGTATCTTTTTGCTGCTCGTTCAGGAATAGAAGACCAAGCCCAGAGAAGTGAGCCATCTGTGAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR TCA 90 bp | TTTTCAGCTCTACAGATGCAAACCCTGGATTTAACCCAATCACCATaGCTCATGTGTACTTTAAGTTATAAAAATACTGACACTGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: FSALQMQTLDLTQSP*LMCTLSYKNTDTEG Trigger: CCCTTCAGTGTCAGTATTTTTATAACTTAAAGTACACATGAGTCATGGTGATTGGGTTAAATCCAGGGTTTGCATCTGTAGAGCTGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CAA 90 bp | TCCCCTGTACCTGGACAGCTGGCACCCAAGGAGTCTTACCCAGTCTaGGCAAAGGTCTGCTCAGGGGAGGGCTGGAAGACACAAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SPVPGQLAPKESYPV*AKVCSGEGWKTQAA Trigger: AGCTGCTTGTGTCTTCCAGCCCTCCCCTGAGCAGACCTTTGCCAAGACTGGGTAAGACTCCTTGGGTGCCAGCTGTCCAGGTACAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CAA 90 bp | CCTCTGAAACCACAGACGTGCCTACTGACATGTCTACCCAATGGTTaGTCCATCCACAGCCCAGTCCGTCCCTGCCAGGGAGTCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PLKPQTCLLTCLPNG*SIHSPVRPCQGVQL Trigger: GAGCTGGACTCCCTGGCAGGGACGGACTGGGCTGTGGATGGACAAACCATTGGGTAGACATGTCAGTAGGCACGTCTGTGGTTTCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTCCCACTCTCTCCCAAAGTGGCCCTGTaGCTCCTGCACTCCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FCPKVTQLSVNLGLLPLSPKVAL*LLHSPG Trigger: ACCTGGGGAGTGCAGGAGCCACAGGGCCACTTTGGG...AGAGAGTGGGAGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAGAGGAGGCATACGTTTGGAGGAACCAGTGCCTTAGCCAGCTAGAAGTGTGCTCAGGGGAGGGCTaGAAGACACAAGCAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CEEEAYVWRNQCLSQLEVCSGEG*KTQAAP Trigger: AGGAGCTGCTTGTGTCTTCCAGCCCTCCCCTGAGCA...CACTTCTAGCTGGCTAAGGCACTGGTTCCTCCAAACGTATGCCTCCTCTTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGATAGCCTTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTGTGTTCCTTCCTTGGTaGCCCCACAGCTGGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: EDSLLSQGHSALCKSWASVFLPW*PHSWGR Trigger: CCTACCCCAGCTGTGGGGGCACCAAGGAAGGAACAC...AGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAAGGCTATCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | AACCAGTGCCTTAGCCAGCTAGAAGTGCTAAAGACCTTCAGGTTCCTAAGTGAGTGCACACCTCCTTCCTaGCCTGGCACTAGGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: NQCLSQLEVLKTFRFLSECTPPS*PGTRVC Trigger: GCACACCCTAGTGCCAGGCCAGGAAGGAGGTGTGCA...CTCACTTAGGAACCTGAAGGTCTTTAGCACTTCTAGCTGGCTAAGGCACTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR GCA 90 bp | AACAAACAATACCCTGGTAGTCCCTGTCCTCCCTTATCTAGAGTCTCTACTTCCGTCTTGGCAAAGGTCTaGTCAGGGGAGGGCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NKQYPGSPCPPLSRVSTSVLAKV*SGEGWK Trigger: CTTCCAGCCCTCCCCTGAGCAGACCTTTGCCAAGAC...GGAAGTAGAGACTCTAGATAAGGGAGGACAGGGACTACCAGGGTATTGTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR GCA 90 bp | AACAAACAATACCCTGGTAGTCCCTGTCCTCCCTTATCTAGAGTCTCTACTTCCCCCAGTGGGCAGGTGTaGAACTCACTGCTTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: NKQYPGSPCPPLSRVSTSPSGQV*NSLLPL Trigger: AAGGGGAAGCAGTGAGTTGCACACCTGCCCACTGGG...GGAAGTAGAGACTCTAGATAAGGGAGGACAGGGACTACCAGGGTATTGTTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | CTAATTTCACAGCAATGGGGTGTAGCCTGGACACCAAGCTTTCAAAACTCCACACAGCAGAGACCCCAGTaGGCAGGTGTGCAACTCACT | + |
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Preference number: 2 (lower is better) Translates to: LISQQWGVAWTPSFQNSTQQRPQ*AGVQLT Trigger: AGTGAGTTGCACACCTGCCCACTGGGGTCTCTGCTG...TGTGGAGTTTTGAAAGCTTGGTGTCCAGGCTACACCCCATTGCTGTGAAATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | TATGGAGATCTCACAGATGGCTCACTTCTCTGGGCTTGGTCTTCTATTCCTGAACTGTACCTGGACAGCTaGCACCCAAGGAGTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: YGDLTDGSLLWAWSSIPELYLDS*HPRSLT Trigger: GGTAAGACTCCTTGGGTGCCAGCTGTCCAGGTACAG...TTCAGGAATAGAAGACCAAGCCCAGAGAAGTGAGCCATCTGTGAGATCTCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR GCA 90 bp | TATGGAGATCTCACAGATGGCTCACTTCTCTGGGCTTGGTCTTCTATTCCTGAACTCCCAAAAGGCCTCTaGCCCAATACAGCCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: YGDLTDGSLLWAWSSIPELPKGL*PNTACC Trigger: ACAACAGGCTGTATTGGGGCAGAGGCCTTTTGGGAG...TTCAGGAATAGAAGACCAAGCCCAGAGAAGTGAGCCATCTGTGAGATCTCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR TCA 90 bp | AACCAGTGCCTTAGCCAGCTAGAAGTGCTAAAGACCTTCAGGTTCCTAAGTGAGAGAACTGTGATTCTCTaGGGTCCCCCTGATACACAA | + |
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Preference number: 2 (lower is better) Translates to: NQCLSQLEVLKTFRFLSERTVIL*GPPDTQ Trigger: TTGTGTATCAGGGGGACCTCAGAGAATCACAGTTCT...CTCACTTAGGAACCTGAAGGTCTTTAGCACTTCTAGCTGGCTAAGGCACTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | CTAATTTCACAGCAATGGGGTGTAGCCTGGACACCAAGCTTTCAAAACTCCACAAGGAAAAAGGGGGTGTaGAAAGGGCTACTCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LISQQWGVAWTPSFQNSTRKKGV*KGLLHR Trigger: TCTGTGGAGTAGCCCTTTCCACACCCCCTTTTTCCT...TGTGGAGTTTTGAAAGCTTGGTGTCCAGGCTACACCCCATTGCTGTGAAATTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | TATAAAACCTATTCTAAAGTCATGGGTTGTGCAAAAACAGATGGTCCACCAGGTACAGTGTTCCTTCCTTaGTGCCCCCACAGCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: YKTYSKVMGCAKTDGPPGTVFLP*CPHSWG Trigger: ACCCCAGCTGTGGGGGCACCAAGGAAGGAACACTGT...ACCTGGTGGACCATCTGTTTTTGCACAACCCATGACTTTAGAATAGGTTTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTCCCACTCTCTAAACCTTGGAAATTCTaGAGAGGCAGACTTAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: FCPKVTQLSVNLGLLPLSKPWKF*RGRLRR Trigger: CCTTCTAAGTCTGCCTCTCCAGAATTTCCAAGGTTT...AGAGAGTGGGAGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR GCA 90 bp | TTGAAACCCAGATATTTCCTAGGGACTGTCCTGGCTCTCAGAACATCTGGACCATTCTGGGAAAATCTGTaGTCAGGGAAGAGAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKPRYFLGTVLALRTSGPFWENL*SGKRKE Trigger: CTCTTTTCTCTTCCCTGAGCACAGATTTTCCCAGAA...TGGTCCAGATGTTCTGAGAGCCAGGACAGTCCCTAGGAAATATCTGGGTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR TCA 90 bp | TCCACCAGGTCTGGCTATGGTTATTCTGATAGTTCAAAGCCATTTTGTGGATTAGCACGGAGGGTATGCTaGACAGGAGGTTTTATTGAG | + |
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Preference number: 2 (lower is better) Translates to: STRSGYGYSDSSKPFCGLARRVC*TGGFIE Trigger: CTCAATAAAACCTCCTGTTCAGCATACCCTCCGTGC...TAATCCACAAAATGGCTTTGAACTATCAGAATAACCATAGCCAGACCTGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CCA 90 bp | TCTACAGATGCAAACCCTGGATTTAACCCAATCACCATGACTCATGTGTACTTTCCCTCCTCATACTTCTaGGAAAATCTGTGCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: STDANPGFNPITMTHVYFPSSYF*ENLCSG Trigger: CCCTGAGCACAGATTTTCCCAGAAGTATGAGGAGGG...AAAGTACACATGAGTCATGGTGATTGGGTTAAATCCAGGGTTTGCATCTGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR TCA 90 bp | TATAAAACCTATTCTAAAGTCATGGGTTGTGCAAAAACAGATGGTCCACCAGGTACACAAAAGCAGATGTaGGCTCATGCCAGGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: YKTYSKVMGCAKTDGPPGTQKQM*AHARPS Trigger: AGATGGCCTGGCATGAGCTCACATCTGCTTTTGTGT...ACCTGGTGGACCATCTGTTTTTGCACAACCCATGACTTTAGAATAGGTTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR TCA 90 bp | TATAAAACCTATTCTAAAGTCATGGGTTGTGCAAAAACAGATGGTCCACCAGGTCAGCCTGGAGAAATGTaGAGAGGAGGCATACGTTTG | + |
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Preference number: 2 (lower is better) Translates to: YKTYSKVMGCAKTDGPPGQPGEM*RGGIRL Trigger: CAAACGTATGCCTCCTCTTCACATTTCTCCAGGCTG...ACCTGGTGGACCATCTGTTTTTGCACAACCCATGACTTTAGAATAGGTTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR TCA 90 bp | TATGGAGATCTCACAGATGGCTCACTTCTCTGGGCTTGGTCTTCTATTCCTGAAGATACTTTGGATCTCTaGGTATTCTTCCCTGTAATT | + |
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Preference number: 2 (lower is better) Translates to: YGDLTDGSLLWAWSSIPEDTLDL*VFFPVI Trigger: AATTACAGGGAAGAATACTCAGAGATCCAAAGTATC...TTCAGGAATAGAAGACCAAGCCCAGAGAAGTGAGCCATCTGTGAGATCTCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 72 bp | AGGCCATCTGATAGCCCAAAGTGGCCCTGTGGCTCCTaGACTCCCCAGGTCCCCTGTACCTGGACAGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: RPSDSPKWPCGS*TPQVPCTWTAG Trigger: GCCAGCTGTCCAGGTACAGGGGACCTGGGGAGTGCAGGAGCCACAGGGCCACTTTGGGCTATCAGATGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CCA 72 bp | CCCTGTGGCTCCTGCACTCCCCAGGTCCCCTGTACCTaGACAGCTGGCACCCAAGGAGTCTTACCCAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: PCGSCTPQVPCT*TAGTQGVLPSL Trigger: AAGACTGGGTAAGACTCCTTGGGTGCCAGCTGTCCAGGTACAGGGGACCTGGGGAGTGCAGGAGCCACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CCA 72 bp | TCCTTCCTTGGTGCCCCCACAGCTGGGGTAGGGTGCTaGGGTGAAGAACAAGGCTCTACGGCTCCTAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SFLGAPTAGVGC*GEEQGSTAPRR Trigger: CCTTCTAGGAGCCGTAGAGCCTTGTTCTTCACCCCAGCACCCTACCCCAGCTGTGGGGGCACCAAGGAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 72 bp | GCACCCAAGGAGTCTTACCCAGTCTTGGCAAAGGTCTaGTCAGGGGAGGGCTGGAAGACACAAGCAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: APKESYPVLAKV*SGEGWKTQAAP Trigger: AGGAGCTGCTTGTGTCTTCCAGCCCTCCCCTGAGCAGACCTTTGCCAAGACTGGGTAAGACTCCTTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 72 bp | AGCTGCACACCTCCTTCCTGGCCTGGCACTAGGGTGTaGAGTAGTCACTCTTGGGGTAACCAGCCTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: SCTPPSWPGTRV*SSHSWGNQPET Trigger: TGTCTCAGGCTGGTTACCCCAAGAGTGACTACTGCACACCCTAGTGCCAGGCCAGGAAGGAGGTGTGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 72 bp | AAGAGCAGCACTATAGTGTCGTGCCCGTCCTTTAACTaGCCTTGTGCCCAGCCAGCCCAGACCAGCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: KSSTIVSCPSFN*PCAQPAQTSRD Trigger: GTCTCTGCTGGTCTGGGCTGGCTGGGCACAAGGGCAGTTAAAGGACGGGCACGACACTATAGTGCTGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CCA 72 bp | CCCACAGAAGGAAGCAGGAGAGTGTCTCCTGGAATGTaGCAAGGCGCCTTGGAGCTGAACCTTGCCTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PTEGSRRVSPGM*QGALELNLALQ Trigger: CTGCAAGGCAAGGTTCAGCTCCAAGGCGCCTTGCCACATTCCAGGAGACACTCTCCTGCTTCCTTCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTCCCACTCTCTCACAGTGTTCCTTCCTaGGTGCCCCCACAGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: FCPKVTQLSVNLGLLPLSHSVPS*VPPQLG Trigger: CCCCAGCTGTGGGGGCACCAAGGAAGGAACACTGTG...AGAGAGTGGGAGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CCA 72 bp | CACTCAGTCCCCCTGGGACCAGTGGATCCTAGACTATaGAGATCTCACAGATGGCTCACTTCTCTGGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: HSVPLGPVDPRL*RSHRWLTSLGL Trigger: CAAGCCCAGAGAAGTGAGCCATCTGTGAGATCTCCATAGTCTAGGATCCACTGGTCCCAGGGGGACTGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR TCA 72 bp | GAGTGTCTCCTGGAATGTGGCAAGGCGCCTTGGAGCTaGACCTTGCCTTGCAGCCCTTCTTTAATTAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: ECLLECGKAPWS*TLPCSPSLISS Trigger: AGAGCTAATTAAAGAAGGGCTGCAAGGCAAGGTTCAGCTCCAAGGCGCCTTGCCACATTCCAGGAGACACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 72 bp | TTTGGACCCTCCCTTGTAAGACTCCCAAAAGGCCTCTaGCCCAATACAGCCTGTTGTTGGAGAGACCACATG | + |
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Preference number: 3 (lower is better) Translates to: FGPSLVRLPKGL*PNTACCWRDHM Trigger: CATGTGGTCTCTCCAACAACAGGCTGTATTGGGGCAGAGGCCTTTTGGGAGTCTTACAAGGGAGGGTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CAA 90 bp | TTGAAACCCAGATATTTCCTAGGGACTGTCCTGGCTCTCAGAACATCTGGACCAATGTGGCAAGGCGCCTaGGAGCTGAACCTTGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LKPRYFLGTVLALRTSGPMWQGA*ELNLAL Trigger: CAAGGCAAGGTTCAGCTCCAAGGCGCCTTGCCACAT...TGGTCCAGATGTTCTGAGAGCCAGGACAGTCCCTAGGAAATATCTGGGTTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CCA 72 bp | GTCAGCCTGGAGAAATGTGAAGAGGAGGCATACGTTTaGAGGAACCAGTGCCTTAGCCAGCTAGAAGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: VSLEKCEEEAYV*RNQCLSQLEVL Trigger: TAGCACTTCTAGCTGGCTAAGGCACTGGTTCCTCCAAACGTATGCCTCCTCTTCACATTTCTCCAGGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR GCA 72 bp | TGGAAGACACAAGCAGCTCCTCTGAAACCACAGACGTaGCTACTGACATGTCTACCCAATGGTTTGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: WKTQAAPLKPQT*LLTCLPNGLSI Trigger: GATGGACAAACCATTGGGTAGACATGTCAGTAGGCACGTCTGTGGTTTCAGAGGAGCTGCTTGTGTCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CCA 72 bp | TCAGACATTCTAATTTCACAGCAATGGGGTGTAGCCTaGACACCAAGCTTTCAAAACTCCACACCCAACCCC | + |
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Preference number: 3 (lower is better) Translates to: SDILISQQWGVA*TPSFQNSTPNP Trigger: GGGGTTGGGTGTGGAGTTTTGAAAGCTTGGTGTCCAGGCTACACCCCATTGCTGTGAAATTAGAATGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CAA 90 bp | AACAAACAATACCCTGGTAGTCCCTGTCCTCCCTTATCTAGAGTCTCTACTTCCCAATACAGCCTGTTGTaGGAGAGACCACATGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: NKQYPGSPCPPLSRVSTSQYSLL*ERPHGN Trigger: GTTCCCATGTGGTCTCTCCAACAACAGGCTGTATTG...GGAAGTAGAGACTCTAGATAAGGGAGGACAGGGACTACCAGGGTATTGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR-3UTR CAA 90 bp | TATAAAACCTATTCTAAAGTCATGGGTTGTGCAAAAACAGATGGTCCACCAGGTCCCCAATACAGCCTGTaGTTGGAGAGACCACATGGG | + |
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Preference number: 3 (lower is better) Translates to: YKTYSKVMGCAKTDGPPGPQYSL*LERPHG Trigger: CCCATGTGGTCTCTCCAACAACAGGCTGTATTGGGG...ACCTGGTGGACCATCTGTTTTTGCACAACCCATGACTTTAGAATAGGTTTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR TCA 72 bp | AGATGGCTCACTTCTCTGGGCTTGGTCTTCTATTCCTaGACGAGCAGCAAAAAGATACTTTGGATCTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RWLTSLGLVFYS*TSSKKILWISE Trigger: CTCAGAGATCCAAAGTATCTTTTTGCTGCTCGTTCAGGAATAGAAGACCAAGCCCAGAGAAGTGAGCCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| 3UTR GCA 72 bp | AGGATGGTACCCCATATTCTAGCTTCCCAAGGATTCTaGATAGAGGGGACAAACAAAGACAAGCCAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RMVPHILASQGF*IEGTNKDKPTF Trigger: AAAGGTTGGCTTGTCTTTGTTTGTCCCCTCTATGCAGAATCCTTGGGAAGCTAGAATATGGGGTACCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| 3UTR CCA 72 bp | TATGGAGATCTCACAGATGGCTCACTTCTCTGGGCTTaGTCTTCTATTCCTGAACGAGCAGCAAAAAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: YGDLTDGSLLWA*SSIPERAAKRY Trigger: GTATCTTTTTGCTGCTCGTTCAGGAATAGAAGACCAAGCCCAGAGAAGTGAGCCATCTGTGAGATCTCCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| 3UTR TCA 72 bp | CTACAGATGCAAACCCTGGATTTAACCCAATCACCATaGCTCATGTGTACTTTAAGTTATAAAAATACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LQMQTLDLTQSP*LMCTLSYKNTD Trigger: GTCAGTATTTTTATAACTTAAAGTACACATGAGTCATGGTGATTGGGTTAAATCCAGGGTTTGCATCTGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TCTACCTCCTACTCCACCACAGTGTTCCTTCCTTGGTGCCCCCACAGCTGGGGTCCACGGAGTCCTGGCTaGCTGGCTCCGGGAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STSYSTTVFLPWCPHSWGPRSPG*LAPGGF Trigger: AAAGCCTCCCGGAGCCAGGCAGCCAGGACTCCGTGG...ACCCCAGCTGTGGGGGCACCAAGGAAGGAACACTGTGGTGGAGTAGGAGGTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | AGGGGAGGGCTGGAAGACACAAGCAGCTCCTCTGAAACCACAGACGTGCCTACTTGCGTGCGATGCGCATaGTCCTCAGGGCCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RGGLEDTSSSSETTDVPTCVRCA*SSGPAL Trigger: CAGTGCAGGCCCTGAGGATCATGCGCATCGCACGCA...AGTAGGCACGTCTGTGGTTTCAGAGGAGCTGCTTGTGTCTTCCAGCCCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | CAGGTCCCCTGTACCTGGACAGCTGGCACCCAAGGAGTCTTACCCAGTCTTGGCATCAGCTCCAGCTCATaGTTGGCTGCCGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPCTWTAGTQGVLPSLGISSSS*LAAVSR Trigger: CCTGGAGACGGCAGCCAAGCATGAGCTGGAGCTGAT...GCCAAGACTGGGTAAGACTCCTTGGGTGCCAGCTGTCCAGGTACAGGGGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| 3UTR CAA 72 bp | CCTGGACAGCTGGCACCCAAGGAGTCTTACCCAGTCTaGGCAAAGGTCTGCTCAGGGGAGGGCTGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGQLAPKESYPV*AKVCSGEGWKT Trigger: TGTCTTCCAGCCCTCCCCTGAGCAGACCTTTGCCAAGACTGGGTAAGACTCCTTGGGTGCCAGCTGTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | GGATTAGCAGCCCCAGGCTCCAGCTGTACCTGGAAGCTTGTTGAGAAAGAACACCCAGGTCGTCCAAGATaGGCTGCACCCTGCGCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLAAPGSSCTWKLVEKEHPGRPR*AAPCAR Trigger: TCGCGCGCAGGGTGCAGCTCATCTTGGACGACCTGG...GTGTTCTTTCTCAACAAGCTTCCAGGTACAGCTGGAGCCTGGGGCTGCTAATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | CAGGTCCCCTGTACCTGGACAGCTGGCACCCAAGGAGTCTTACCCAGTCTTGGCTGTAGGCGGGTCCTATaGTGCTTCTCCTCTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVPCTWTAGTQGVLPSLGCRRVL*CFSSVS Trigger: GCTGACAGAGGAGAAGCATCATAGGACCCGCCTACA...GCCAAGACTGGGTAAGACTCCTTGGGTGCCAGCTGTCCAGGTACAGGGGACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TTACCCTCTACCTCCTACTCCACCACAGTGTTCCTTCCTTGGTGCCCCCACAGCCCTCAGGGCCTGCACTaGCTGCTGTACGTTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSTSYSTTVFLPWCPHSPQGLH*LLYVGQ Trigger: CTGACCAACGTACAGCAGGCAGTGCAGGCCCTGAGG...GCTGTGGGGGCACCAAGGAAGGAACACTGTGGTGGAGTAGGAGGTAGAGGGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAACCCAGATATTTCCTAGGGACTGTCCTGGCTCTCAGAACATCTGGACCACCTGCCACGGAGTCCTaGCTGCCTGGCTCCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKPRYFLGTVLALRTSGPPATES*LPGSGR Trigger: CCTCCCGGAGCCAGGCAGCCAGGACTCCGTGGCAGG...TGGTCCAGATGTTCTGAGAGCCAGGACAGTCCCTAGGAAATATCTGGGTTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGCCCCAATACAGCCTGTTGTTGGAGAGACCACATGGGAACAATCAAAAAGCTTGGCCCCTCCCTaGCAGCAGGCTCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASAPIQPVVGETTWEQSKSLAPP*QQALGA Trigger: TGCCCCCAGAGCCTGCTGCCAGGGAGGGGCCAAGCT...TTTTGATTGTTCCCATGTGGTCTCTCCAACAACAGGCTGTATTGGGGCAGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | TTACCCTCTACCTCCTACTCCACCACAGTGTTCCTTCCTTGGTGCCCCCACAGCTGGTACCCATGCACATaGCCACGGAGGAGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSTSYSTTVFLPWCPHSWYPCT*PRRRQG Trigger: TCCTTGTCTCCTCCGTGGTCATGTGCATGGGTACCA...GCTGTGGGGGCACCAAGGAAGGAACACTGTGGTGGAGTAGGAGGTAGAGGGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | AACAAACAATACCCTGGTAGTCCCTGTCCTCCCTTATCTAGAGTCTCTACTTCCCCGGCTACCCCAGCTTaGCCCCTCCCTGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKQYPGSPCPPLSRVSTSPATPA*PLPGSR Trigger: CCTGCTGCCAGGGAGGGGCCAAGCTGGGGTAGCCGG...GGAAGTAGAGACTCTAGATAAGGGAGGACAGGGACTACCAGGGTATTGTTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGAGGAGGCATACGTTTGGAGGAACCAGTGCCTTAGCCAGCTAGAAGTGGCAGGTACTCCAGAGTaGACCAGCCGATGCAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CEEEAYVWRNQCLSQLEVAGTPE*TSRCKP Trigger: CGGCTTGCATCGGCTGGTTCACTCTGGAGTACCTGC...CACTTCTAGCTGGCTAAGGCACTGGTTCCTCCAAACGTATGCCTCCTCTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | CTAATTTCACAGCAATGGGGTGTAGCCTGGACACCAAGCTTTCAAAACTCCACACCTGGCAGCAGGCTCTaGGGGCAGGGTGTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LISQQWGVAWTPSFQNSTPGSRL*GQGVQV Trigger: GACCTGGACACCCTGCCCCCAGAGCCTGCTGCCAGG...TGTGGAGTTTTGAAAGCTTGGTGTCCAGGCTACACCCCATTGCTGTGAAATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | CACAAAAGCAGATGTGAGCTCATGCCAGGCCATCTGATAGCCCAAAGTGGCCCTAAGCTTGTTGGGCGATaGGAAGAGGCGCAGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HKSRCELMPGHLIAQSGPKLVGR*EEAQQV Trigger: TACCTGCTGCGCCTCTTCTCATCGCCCAACAAGCTT...AGGGCCACTTTGGGCTATCAGATGGCCTGGCATGAGCTCACATCTGCTTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | GAAGATAGCCTTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTGCTTTGCTCAGCAGATaGGTCCATGCTCCCCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDSLLSQGHSALCKSWASALLSR*VHAPRG Trigger: CCCGCGGGGAGCATGGACGCATCTGCTGAGCAAAGC...AGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAAGGCTATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTCCCACTCTCTGGTGCTCCACGCGGTTaGCTTCGGAGTCCACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: FCPKVTQLSVNLGLLPLSGAPRG*LRSPPL Trigger: AAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACC...AGAGAGTGGGAGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGGGCTGGAAGACACAAGCAGCTCCTCTGAAACCACAGACGTGCCTACTACACTTGAACGCGTCTaGGTCCCGGTCAAAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGGLEDTSSSSETTDVPTTLERV*VPVKVE Trigger: TTCTACTTTGACCGGGACCCAGACGCGTTCAAGTGT...AGTAGGCACGTCTGTGGTTTCAGAGGAGCTGCTTGTGTCTTCCAGCCCTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | TTACCCTCTACCTCCTACTCCACCACAGTGTTCCTTCCTTGGTGCCCCCACAGCCAAAGTGAAGCTTGTTaGGCGATGAGAAGAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSTSYSTTVFLPWCPHSQSEAC*AMRRGA Trigger: TGCGCCTCTTCTCATCGCCCAACAAGCTTCACTTTG...GCTGTGGGGGCACCAAGGAAGGAACACTGTGGTGGAGTAGGAGGTAGAGGGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| 3UTR CAA 72 bp | AGCAGGAGAGTGTCTCCTGGAATGTGGCAAGGCGCCTaGGAGCTGAACCTTGCCTTGCAGCCCTTCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRRVSPGMWQGA*ELNLALQPFFN Trigger: ATTAAAGAAGGGCTGCAAGGCAAGGTTCAGCTCCAAGGCGCCTTGCCACATTCCAGGAGACACTCTCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | AACCAGTGCCTTAGCCAGCTAGAAGTGCTAAAGACCTTCAGGTTCCTAAGTGAGAGTGGCGGGCCAGTTTaGAGATGCGTGCGATGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQCLSQLEVLKTFRFLSESGGPV*RCVRCA Trigger: TGCGCATCGCACGCATCTTCAAACTGGCCCGCCACT...CTCACTTAGGAACCTGAAGGTCTTTAGCACTTCTAGCTGGCTAAGGCACTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TCTGGAGAGGCAGACTTAGAAGGTGCCCTGAAAAATAAGCCCTCCTCATACTTCAGGGCCTGCACTGCCTaGTGTACGTTGGTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGEADLEGALKNKPSSYFRACTA*CTLVSS Trigger: GGAGCTGACCAACGTACAGCAGGCAGTGCAGGCCCT...GAAGTATGAGGAGGGCTTATTTTTCAGGGCACCTTCTAAGTCTGCCTCTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TCTGGAGAGGCAGACTTAGAAGGTGCCCTGAAAAATAAGCCCTCCTCATACTTCCCCGGGCTTGCCTTCTaGACTGCTGGAGTTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGEADLEGALKNKPSSYFPGLAF*TAGVEL Trigger: GAGCTCAACTCCAGCAGTGCAGAAGGCAAGCCCGGG...GAAGTATGAGGAGGGCTTATTTTTCAGGGCACCTTCTAAGTCTGCCTCTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | GAAGATAGCCTTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTGCTCCAGCTCATGCTTaGCTGCCGTCTCCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: EDSLLSQGHSALCKSWASAPAHA*LPSPGH Trigger: GTGTCCTGGAGACGGCAGCCAAGCATGAGCTGGAGC...AGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAAGGCTATCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGAGGAGGCATACGTTTGGAGGAACCAGTGCCTTAGCCAGCTAGAAGTGACTGGGGGATGCTCTTaGACAGAGTTTCAGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CEEEAYVWRNQCLSQLEVTGGCS*TEFQDG Trigger: GCCATCCTGAAACTCTGTTCAAGAGCATCCCCCAGT...CACTTCTAGCTGGCTAAGGCACTGGTTCCTCCAAACGTATGCCTCCTCTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | TCTGAAACCACAGACGTGCCTACTGACATGTCTACCCAATGGTTTGTCCATCCACTGCACTGCTGGAGTTaGGCTCCATCAGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SETTDVPTDMSTQWFVHPLHCWS*APSAPA Trigger: AGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCAG...TGGATGGACAAACCATTGGGTAGACATGTCAGTAGGCACGTCTGTGGTTTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | TCTGAAACCACAGACGTGCCTACTGACATGTCTACCCAATGGTTTGTCCATCCAGAAGGTATCGCTGTGTaGGAGCTTCAGCCGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: SETTDVPTDMSTQWFVHPEGIAV*ELQPAT Trigger: GGTAGCCGGCTGAAGCTCTCACACAGCGATACCTTC...TGGATGGACAAACCATTGGGTAGACATGTCAGTAGGCACGTCTGTGGTTTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TGTGAAGAGGAGGCATACGTTTGGAGGAACCAGTGCCTTAGCCAGCTAGAAGTGCAAGAAGCTGATGGCTaGGTTGAGCTTGCCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CEEEAYVWRNQCLSQLEVQEADG*VELAQS Trigger: ACTCTGGGCAAGCTCAACGCAGCCATCAGCTTCTTG...CACTTCTAGCTGGCTAAGGCACTGGTTCCTCCAAACGTATGCCTCCTCTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | GCCTCTGCCCCAATACAGCCTGTTGTTGGAGAGACCACATGGGAACAATCAAAAACAGTTGATGAGCTCTaGCAACCGGGTCTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASAPIQPVVGETTWEQSKTVDEL*QPGLRV Trigger: TACCCTGAGACCCGGTTGGCAGAGCTCATCAACTGT...TTTTGATTGTTCCCATGTGGTCTCTCCAACAACAGGCTGTATTGGGGCAGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | CTAATTTCACAGCAATGGGGTGTAGCCTGGACACCAAGCTTTCAAAACTCCACACAGCTCATGCTTGGCTaGCGTCTCCAGGACACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LISQQWGVAWTPSFQNSTQLMLG*RLQDTL Trigger: CAACGTGTCCTGGAGACGGCAGCCAAGCATGAGCTG...TGTGGAGTTTTGAAAGCTTGGTGTCCAGGCTACACCCCATTGCTGTGAAATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | TCTACAGATGCAAACCCTGGATTTAACCCAATCACCATGACTCATGTGTACTTTGGAGTCCTGGCTGCCTaGCTCCGGGAGGCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: STDANPGFNPITMTHVYFGVLAA*LREALL Trigger: GAGCAAAGCCTCCCGGAGCCAGGCAGCCAGGACTCC...AAAGTACACATGAGTCATGGTGATTGGGTTAAATCCAGGGTTTGCATCTGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | TCTACAGATGCAAACCCTGGATTTAACCCAATCACCATGACTCATGTGTACTTTTTCCAGACACACTTCTaGCAGCGGCGCCAGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STDANPGFNPITMTHVYFFQTHF*QRRQRP Trigger: GGGCCGCTGGCGCCGCTGCCAGAAGTGTGTCTGGAA...AAAGTACACATGAGTCATGGTGATTGGGTTAAATCCAGGGTTTGCATCTGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGAGGAGGCATACGTTTGGAGGAACCAGTGCCTTAGCCAGCTAGAAGTGCTGCCTGCTGTACGTTaGTCAGCTCCATCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CEEEAYVWRNQCLSQLEVLPAVR*SAPSFL Trigger: CAAGAATGATGGAGCTGACCAACGTACAGCAGGCAG...CACTTCTAGCTGGCTAAGGCACTGGTTCCTCCAAACGTATGCCTCCTCTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAACCCAGATATTTCCTAGGGACTGTCCTGGCTCTCAGAACATCTGGACCAGATGGCTCTGCTCCATaGTGTAGCCCAGTGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKPRYFLGTVLALRTSGPDGSAP*CSPVRK Trigger: TTTCCGCACTGGGCTACACCATGGAGCAGAGCCATC...TGGTCCAGATGTTCTGAGAGCCAGGACAGTCCCTAGGAAATATCTGGGTTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | GAAGATAGCCTTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTCGCTTCTCGCTCAGATaGCTCTTGCAACAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EDSLLSQGHSALCKSWASRFSLR*LLQQSS Trigger: GGATGACTGTTGCAAGAGCCATCTGAGCGAGAAGCG...AGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAAGGCTATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TCCACCAGGTCTGGCTATGGTTATTCTGATAGTTCAAAGCCATTTTGTGGATTATCGTCCAAGATGAGCTaGACCCTGCGCGCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STRSGYGYSDSSKPFCGLSSKMS*TLRAIS Trigger: GGAGATCGCGCGCAGGGTGCAGCTCATCTTGGACGA...TAATCCACAAAATGGCTTTGAACTATCAGAATAACCATAGCCAGACCTGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TCCACCAGGTCTGGCTATGGTTATTCTGATAGTTCAAAGCCATTTTGTGGATTATTCTCCAGCGTTGGGTaGTCCACGCGGTTGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: STRSGYGYSDSSKPFCGLFSSVG*STRLPS Trigger: CGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAA...TAATCCACAAAATGGCTTTGAACTATCAGAATAACCATAGCCAGACCTGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | CTAATTTCACAGCAATGGGGTGTAGCCTGGACACCAAGCTTTCAAAACTCCACACATGGTGTAGCCCAGTaGGGAAAAGACGAAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LISQQWGVAWTPSFQNSTHGVAQ*GKDEDA Trigger: GGCATCTTCGTCTTTTCCGCACTGGGCTACACCATG...TGTGGAGTTTTGAAAGCTTGGTGTCCAGGCTACACCCCATTGCTGTGAAATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR GCA 90 bp | TCCACCAGGTCTGGCTATGGTTATTCTGATAGTTCAAAGCCATTTTGTGGATTAGAGAACCCCCGGGCTTaGCTTCTGCACTGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: STRSGYGYSDSSKPFCGLENPRA*LLHCWS Trigger: ACTCCAGCAGTGCAGAAGGCAAGCCCGGGGGTTCTC...TAATCCACAAAATGGCTTTGAACTATCAGAATAACCATAGCCAGACCTGGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR CCA 90 bp | CTAATTTCACAGCAATGGGGTGTAGCCTGGACACCAAGCTTTCAAAACTCCACATGCCCAGAGTGGTCTTaGGGTAGATGTCACCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LISQQWGVAWTPSFQNSTCPEWS*GRCHHS Trigger: GCTATGGTGACATCTACCCCAAGACCACTCTGGGCA...TGTGGAGTTTTGAAAGCTTGGTGTCCAGGCTACACCCCATTGCTGTGAAATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | TCCACCAGGTCTGGCTATGGTTATTCTGATAGTTCAAAGCCATTTTGTGGATTATCTCAGGGTACTGGCTaGGCAGGTCTCCGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STRSGYGYSDSSKPFCGLSQGTG*AGLRRA Trigger: TGCTCTACGGAGACCTGCTCAGCCAGTACCCTGAGA...TAATCCACAAAATGGCTTTGAACTATCAGAATAACCATAGCCAGACCTGGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | AACAAACAATACCCTGGTAGTCCCTGTCCTCCCTTATCTAGAGTCTCTACTTCCAGTCATCCAGGAATTTaGGGTCCACCTTCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKQYPGSPCPPLSRVSTSSHPGI*GPPSRS Trigger: ACTTCTGGAAGGTGGACCTCAAATTCCTGGATGACT...GGAAGTAGAGACTCTAGATAAGGGAGGACAGGGACTACCAGGGTATTGTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
||
| CDS-3UTR TCA 90 bp | TCTACAGATGCAAACCCTGGATTTAACCCAATCACCATGACTCATGTGTACTTTCGGAGGAGACAAGGATaGGCAGGAAGGATAGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: STDANPGFNPITMTHVYFRRRQG*AGRIEP Trigger: CGGTTCTATCCTTCCTGCTCATCCTTGTCTCCTCCG...AAAGTACACATGAGTCATGGTGATTGGGTTAAATCCAGGGTTTGCATCTGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR GCA 90 bp | TCTACAGATGCAAACCCTGGATTTAACCCAATCACCATGACTCATGTGTACTTTATTCTTGCGCCCAGGTaGGTGAGTGTGAGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: STDANPGFNPITMTHVYFILAPR*VSVRLT Trigger: TGTGAGCCTCACACTCACGCACCTGGGCGCAAGAAT...AAAGTACACATGAGTCATGGTGATTGGGTTAAATCCAGGGTTTGCATCTGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR TCA 90 bp | TCCACCAGGTCTGGCTATGGTTATTCTGATAGTTCAAAGCCATTTTGTGGATTATTGTTAATGATGGGGTaGATGGGCAGGGCAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: STRSGYGYSDSSKPFCGLLLMMG*MGRAMA Trigger: TGCCATTGCCCTGCCCATTCACCCCATCATTAACAA...TAATCCACAAAATGGCTTTGAACTATCAGAATAACCATAGCCAGACCTGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CCA 90 bp | TCCACCAGGTCTGGCTATGGTTATTCTGATAGTTCAAAGCCATTTTGTGGATTAGAATGGGCAGGGCAATaGCAATTACCCCACACAAGA | + |
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Preference number: 4 (lower is better) Translates to: STRSGYGYSDSSKPFCGLEWAGQ*QLPHTR Trigger: TCTTGTGTGGGGTAATTGCCATTGCCCTGCCCATTC...TAATCCACAAAATGGCTTTGAACTATCAGAATAACCATAGCCAGACCTGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| 3UTR CAA 72 bp | ACCCCTGTTGGTTCTAAGGTACAAGTTTTCAAGTACTaGAAACCCAGATATTTCCTAGGGACTGTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TPVGSKVQVFKY*KPRYFLGTVLA Trigger: AGCCAGGACAGTCCCTAGGAAATATCTGGGTTTCAAGTACTTGAAAACTTGTACCTTAGAACCAACAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR GCA 90 bp | TATAAAACCTATTCTAAAGTCATGGGTTGTGCAAAAACAGATGGTCCACCAGGTAGCAGATGGGGCAAATaGCCTTCTTCATGTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: YKTYSKVMGCAKTDGPPGSRWGK*PSSCGP Trigger: AGGTCCACATGAAGAAGGGCATTTGCCCCATCTGCT...ACCTGGTGGACCATCTGTTTTTGCACAACCCATGACTTTAGAATAGGTTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS TCA 90 bp | GGCGCCAGCGGCCCTCAGCAGCGTCAACACCCAGGTCGTCCAAGATaGGCTGCACCCTGCGCGCGATCTCCTCCAGCTCCTCGCGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GASGPQQRQHPGRPR*AAPCARSPPAPRAS Trigger: AGAAGCGCGAGGAGCTGGAGGAGATCGCGCGCAGGGTGCAGCTCATCTTGGACGACCTGGGTGTTGACGCTGCTGAGGGCCGCTGGCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | CAGCGGCCCTCAGCAGCGTCAACACCCAGGTCGTCCAAGATGAGCTaGACCCTGCGCGCGATCTCCTCCAGCTCCTCGCGCTTCTCGCTC | + |
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Preference number: 5 (lower is better) Translates to: QRPSAASTPRSSKMS*TLRAISSSSSRFSL Trigger: GAGCGAGAAGCGCGAGGAGCTGGAGGAGATCGCGCGCAGGGTGCAGCTCATCTTGGACGACCTGGGTGTTGACGCTGCTGAGGGCCGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | GGGCAGGGTGTCCAGGTCGCTGCGAGAACCCCCGGGCTTGCCTTCTaGACTGCTGGAGTTGAGCTCCATCAGCTCCAGCTCATGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: GQGVQVAARTPGLAF*TAGVELHQLQLMLG Trigger: GCCAAGCATGAGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCAGAAGGCAAGCCCGGGGGTTCTCGCAGCGACCTGGACACCCTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS TCA 90 bp | GGTCGCTGCGAGAACCCCCGGGCTTGCCTTCTGCACTGCTGGAGTTaGGCTCCATCAGCTCCAGCTCATGCTTGGCTGCCGTCTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: GRCENPRACLLHCWS*APSAPAHAWLPSPG Trigger: TCCTGGAGACGGCAGCCAAGCATGAGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCAGAAGGCAAGCCCGGGGGTTCTCGCAGCGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CCA 90 bp | GGGCATGAAGACTCCGGCTTCTCTAGGAACTTCCAGACACACTTCTaGCAGCGGCGCCAGCGGCCCTCAGCAGCGTCAACACCCAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: GHEDSGFSRNFQTHF*QRRQRPSAASTPRS Trigger: CGACCTGGGTGTTGACGCTGCTGAGGGCCGCTGGCGCCGCTGCCAGAAGTGTGTCTGGAAGTTCCTAGAGAAGCCGGAGTCTTCATGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | GTGAACCAGCCGATGCAAGCCGTCTCTACGTTCTCCAGCGTTGGGTaGTCCACGCGGTTGCCTTCGGAGTCCACCACTTGCAGCTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: VNQPMQAVSTFSSVG*STRLPSESTTCSSG Trigger: ACCCGAGCTGCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAGAGACGGCTTGCATCGGCTGGTTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | TGCAAGCCGTCTCTACGTTCTCCAGCGTTGGGTGCTCCACGCGGTTaGCTTCGGAGTCCACCACTTGCAGCTCGGGTATGGTACCCATGC | + |
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Preference number: 5 (lower is better) Translates to: CKPSLRSPALGAPRG*LRSPPLAARVWYPC Trigger: GCATGGGTACCATACCCGAGCTGCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAGAGACGGCTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CCA 90 bp | CAGAGTGAACCAGCCGATGCAAGCCGTCTCTACGTTCTCCAGCGTTaGGTGCTCCACGCGGTTGCCTTCGGAGTCCACCACTTGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: QSEPADASRLYVLQR*VLHAVAFGVHHLQL Trigger: GAGCTGCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAGAGACGGCTTGCATCGGCTGGTTCACTCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | CGGGCCAGTTTGAAGATGCGTGCGATGCGCATGATCCTCAGGGCCTaGACTGCCTGCTGTACGTTGGTCAGCTCCATCATTCTTGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: RASLKMRAMRMILRA*TACCTLVSSIILAP Trigger: GGGCGCAAGAATGATGGAGCTGACCAACGTACAGCAGGCAGTGCAGGCCCTGAGGATCATGCGCATCGCACGCATCTTCAAACTGGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CCA 90 bp | CCCACATTTACCACGATCTCAATGTCTTCGCCTGCCACGGAGTCCTaGCTGCCTGGCTCCGGGAGGCTTTGCTCAGCAGATGCGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: PTFTTISMSSPATES*LPGSGRLCSADASM Trigger: CATGGACGCATCTGCTGAGCAAAGCCTCCCGGAGCCAGGCAGCCAGGACTCCGTGGCAGGCGAAGACATTGAGATCGTGGTAAATGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | CAGGGCCTGCACTGCCTGCTGTACGTTGGTCAGCTCCATCATTCTTaGGCCCAGGTGCGTGAGTGTGAGGCTCACATAGAAGGGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGLHCLLYVGQLHHS*AQVRECEAHIEGEN Trigger: ATTCTCCCCTTCTATGTGAGCCTCACACTCACGCACCTGGGCGCAAGAATGATGGAGCTGACCAACGTACAGCAGGCAGTGCAGGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | CAGTTTGAAGATGCGTGCGATGCGCATGATCCTCAGGGCCTGCACTaGCTGCTGTACGTTGGTCAGCTCCATCATTCTTGCGCCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QFEDACDAHDPQGLH*LLYVGQLHHSCAQV Trigger: CACCTGGGCGCAAGAATGATGGAGCTGACCAACGTACAGCAGGCAGTGCAGGCCCTGAGGATCATGCGCATCGCACGCATCTTCAAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS TCA 90 bp | TCTGTAGGCGGGTCCTATGATGCTTCTCCTCTGTCAGCAGGGGAATaGAGGTATCGCTGTGTGAGAGCTTCAGCCGGCTACCCCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SVGGSYDASPLSAGE*RYRCVRASAGYPSL Trigger: CAAGCTGGGGTAGCCGGCTGAAGCTCTCACACAGCGATACCTTCATTCCCCTGCTGACAGAGGAGAAGCATCATAGGACCCGCCTACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCCCCAATACAGCCTGTTGTTGGAGAGACCACATGGGAACAATCAAAAGGGTGCTCCACGCGGTaGCCTTCGGAGTCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: ASAPIQPVVGETTWEQSKGCSTR*PSESTT Trigger: AGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCC...TTTTGATTGTTCCCATGTGGTCTCTCCAACAACAGGCTGTATTGGGGCAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | CACAAAAGCAGATGTGAGCTCATGCCAGGCCATCTGATAGCCCAAAGTGGCCCTATGGCTGCGTTGAGCTaGCCCAGAGTGGTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HKSRCELMPGHLIAQSGPMAALS*PRVVLG Trigger: CCCCAAGACCACTCTGGGCAAGCTCAACGCAGCCAT...AGGGCCACTTTGGGCTATCAGATGGCCTGGCATGAGCTCACATCTGCTTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | CACAAAAGCAGATGTGAGCTCATGCCAGGCCATCTGATAGCCCAAAGTGGCCCTAGCTCCAGCTCATGCTaGGCTGCCGTCTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HKSRCELMPGHLIAQSGPSSSSC*AAVSRT Trigger: TGTCCTGGAGACGGCAGCCAAGCATGAGCTGGAGCT...AGGGCCACTTTGGGCTATCAGATGGCCTGGCATGAGCTCACATCTGCTTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | TTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTCCCACTCTCTCTACGTTCTCCAGCGTaGGGTGCTCCACGCGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: FCPKVTQLSVNLGLLPLSLRSPA*GAPRGC Trigger: GCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAG...AGAGAGTGGGAGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS TCA 90 bp | GGCTCACATAGAAGGGGAGAATGGCCAGCACATCCACGATGTTCATaGAGGACAGGGCAAAGTGAAGCTTGTTGGGCGATGAGAAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: GSHRRGEWPAHPRCS*RTGQSEACWAMRRG Trigger: GCCTCTTCTCATCGCCCAACAAGCTTCACTTTGCCCTGTCCTTCATGAACATCGTGGATGTGCTGGCCATTCTCCCCTTCTATGTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | AATGGGCAGGGCAATGGCAATTACCCCACACAAGAAGCTGATGGCTaGGTTGAGCTTGCCCAGAGTGGTCTTGGGGTAGATGTCACCATA | + |
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Preference number: 5 (lower is better) Translates to: NGQGNGNYPTQEADG*VELAQSGLGVDVTI Trigger: TATGGTGACATCTACCCCAAGACCACTCTGGGCAAGCTCAACGCAGCCATCAGCTTCTTGTGTGGGGTAATTGCCATTGCCCTGCCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | TTACCCTCTACCTCCTACTCCACCACAGTGTTCCTTCCTTGGTGCCCCCACAGCAAGTCCATCTCGTTCTaGAAGCAGATGGGGCAAATG | + |
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Preference number: 5 (lower is better) Translates to: LPSTSYSTTVFLPWCPHSKSISF*KQMGQM Trigger: CATTTGCCCCATCTGCTTCAAGAACGAGATGGACTT...GCTGTGGGGGCACCAAGGAAGGAACACTGTGGTGGAGTAGGAGGTAGAGGGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCCCCAATACAGCCTGTTGTTGGAGAGACCACATGGGAACAATCAAAAAAGCTGATGGCTGCGTaGAGCTTGCCCAGAGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: ASAPIQPVVGETTWEQSKKLMAA*SLPRVV Trigger: GACCACTCTGGGCAAGCTCAACGCAGCCATCAGCTT...TTTTGATTGTTCCCATGTGGTCTCTCCAACAACAGGCTGTATTGGGGCAGAGGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 90 bp | TGCACTGCTGGAGTTGAGCTCCATCAGCTCCAGCTCATGCTTGGCTaGCGTCTCCAGGACACGTTGTTTGTTGTAGTACCTGACAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: CTAGVELHQLQLMLG*RLQDTLFVVVPDKV Trigger: AACTTTGTCAGGTACTACAACAAACAACGTGTCCTGGAGACGGCAGCCAAGCATGAGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CCA 90 bp | GACCTCCCCGAAATAGTATACCTCAATGACACACTTGAACGCGTCTaGGTCCCGGTCAAAGTAGAATTCGCGCTTGCCCGGATCGTAATC | + |
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Preference number: 5 (lower is better) Translates to: DLPEIVYLNDTLERV*VPVKVEFALARIVI Trigger: GATTACGATCCGGGCAAGCGCGAATTCTACTTTGACCGGGACCCAGACGCGTTCAAGTGTGTCATTGAGGTATACTATTTCGGGGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | TTGAAACCCAGATATTTCCTAGGGACTGTCCTGGCTCTCAGAACATCTGGACCATCTGCACTGCTGGAGTaGAGCTCCATCAGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LKPRYFLGTVLALRTSGPSALLE*SSISSS Trigger: GCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCAGA...TGGTCCAGATGTTCTGAGAGCCAGGACAGTCCCTAGGAAATATCTGGGTTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | TCCACCAGGTCTGGCTATGGTTATTCTGATAGTTCAAAGCCATTTTGTGGATTAGAGTGGCGGGCCAGTTaGAAGATGCGTGCGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: STRSGYGYSDSSKPFCGLEWRAS*KMRAMR Trigger: GCGCATCGCACGCATCTTCAAACTGGCCCGCCACTC...TAATCCACAAAATGGCTTTGAACTATCAGAATAACCATAGCCAGACCTGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | TATGGAGATCTCACAGATGGCTCACTTCTCTGGGCTTGGTCTTCTATTCCTGAAAATAGCCCCAGTTCCTaGAAACTGCGCTTGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YGDLTDGSLLWAWSSIPENSPSS*KLRLRA Trigger: CGCCCTCAAGCGCAGTTTCAAGGAACTGGGGCTATT...TTCAGGAATAGAAGACCAAGCCCAGAGAAGTGAGCCATCTGTGAGATCTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | GAAGATAGCCTTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTCAGTCATCCAGGAATTaGAGGTCCACCTTCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EDSLLSQGHSALCKSWASQSSRN*RSTFQK Trigger: CTTCTGGAAGGTGGACCTCAAATTCCTGGATGACTG...AGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAAGGCTATCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | TCTGGAGAGGCAGACTTAGAAGGTGCCCTGAAAAATAAGCCCTCCTCATACTTCTCGCTCAGATGGCTCTaGCAACAGTCATCCAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SGEADLEGALKNKPSSYFSLRWL*QQSSRN Trigger: ATTCCTGGATGACTGTTGCAAGAGCCATCTGAGCGA...GAAGTATGAGGAGGGCTTATTTTTCAGGGCACCTTCTAAGTCTGCCTCTCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | GAAGATAGCCTTCTGTCCCAAGGTCACTCAGCTCTCTGTAAATCTTGGGCTTCTACTGCCTGCTGTACGTaGGTCAGCTCCATCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDSLLSQGHSALCKSWASTACCT*VSSIIL Trigger: AAGAATGATGGAGCTGACCAACGTACAGCAGGCAGT...AGAAGCCCAAGATTTACAGAGAGCTGAGTGACCTTGGGACAGAAGGCTATCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | TATGGAGATCTCACAGATGGCTCACTTCTCTGGGCTTGGTCTTCTATTCCTGAAGACTGGGGGATGCTCTaGAACAGAGTTTCAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: YGDLTDGSLLWAWSSIPEDWGML*NRVSGW Trigger: CCATCCTGAAACTCTGTTCAAGAGCATCCCCCAGTC...TTCAGGAATAGAAGACCAAGCCCAGAGAAGTGAGCCATCTGTGAGATCTCCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS-3UTR CAA 90 bp | TCTGGAGAGGCAGACTTAGAAGGTGCCCTGAAAAATAAGCCCTCCTCATACTTCCGTCTCCAGGACACGTaGTTTGTTGTAGTACCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGEADLEGALKNKPSSYFRLQDT*FVVVPD Trigger: GTCAGGTACTACAACAAACAACGTGTCCTGGAGACG...GAAGTATGAGGAGGGCTTATTTTTCAGGGCACCTTCTAAGTCTGCCTCTCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | GCCACGGAGTCCTGGCTGCCTGGCTCCGGGAGGCTTTaGTCAGCAGATGCGTCCATGCTCCCCGCGGGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: ATESWLPGSGRL*SADASMLPAGS Trigger: CGAACCCGCGGGGAGCATGGACGCATCTGCTGAGCAAAGCCTCCCGGAGCCAGGCAGCCAGGACTCCGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 72 bp | TGCCACGGAGTCCTGGCTGCCTGGCTCCGGGAGGCTTaGCTCAGCAGATGCGTCCATGCTCCCCGCGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CHGVLAAWLREA*LSRCVHAPRGF Trigger: GAACCCGCGGGGAGCATGGACGCATCTGCTGAGCAAAGCCTCCCGGAGCCAGGCAGCCAGGACTCCGTGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS TCA 72 bp | GGCCCTCAGCAGCGTCAACACCCAGGTCGTCCAAGATaGGCTGCACCCTGCGCGCGATCTCCTCCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPQQRQHPGRPR*AAPCARSPPAP Trigger: AGGAGCTGGAGGAGATCGCGCGCAGGGTGCAGCTCATCTTGGACGACCTGGGTGTTGACGCTGCTGAGGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | TCAGCAGCGTCAACACCCAGGTCGTCCAAGATGAGCTaGACCCTGCGCGCGATCTCCTCCAGCTCCTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SAASTPRSSKMS*TLRAISSSSSR Trigger: GCGCGAGGAGCTGGAGGAGATCGCGCGCAGGGTGCAGCTCATCTTGGACGACCTGGGTGTTGACGCTGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 72 bp | GGCAGGGTGTCCAGGTCGCTGCGAGAACCCCCGGGCTaGCCTTCTGCACTGCTGGAGTTGAGCTCCATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRVSRSLREPPG*PSALLELSSIS Trigger: GCTGATGGAGCTCAACTCCAGCAGTGCAGAAGGCAAGCCCGGGGGTTCTCGCAGCGACCTGGACACCCTGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | GTCCAGGTCGCTGCGAGAACCCCCGGGCTTGCCTTCTaGACTGCTGGAGTTGAGCTCCATCAGCTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VQVAARTPGLAF*TAGVELHQLQL Trigger: GAGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCAGAAGGCAAGCCCGGGGGTTCTCGCAGCGACCTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 90 bp | AGGTCGCTGCGAGAACCCCCGGGCTTGCCTTCTGCACTGCTGGAGTaGAGCTCCATCAGCTCCAGCTCATGCTTGGCTGCCGTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLREPPGLPSALLE*SSISSSSCLAAVSR Trigger: CCTGGAGACGGCAGCCAAGCATGAGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCAGAAGGCAAGCCCGGGGGTTCTCGCAGCGACCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 90 bp | CTCCAGCGTTGGGTGCTCCACGCGGTTGCCTTCGGAGTCCACCACTaGCAGCTCGGGTATGGTACCCATGCACATGACCACGGAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LQRWVLHAVAFGVHH*QLGYGTHAHDHGGD Trigger: GTCTCCTCCGTGGTCATGTGCATGGGTACCATACCCGAGCTGCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS TCA 72 bp | GAGAACCCCCGGGCTTGCCTTCTGCACTGCTGGAGTTaGGCTCCATCAGCTCCAGCTCATGCTTGGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ENPRACLLHCWS*APSAPAHAWLP Trigger: CGGCAGCCAAGCATGAGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCAGAAGGCAAGCCCGGGGGTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | CCGATGCAAGCCGTCTCTACGTTCTCCAGCGTTGGGTaGTCCACGCGGTTGCCTTCGGAGTCCACCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PMQAVSTFSSVG*STRLPSESTTC Trigger: GCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAGAGACGGCTTGCATCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CCA 72 bp | GACTCCGGCTTCTCTAGGAACTTCCAGACACACTTCTaGCAGCGGCGCCAGCGGCCCTCAGCAGCGTCAACA | + |
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Preference number: 6 (lower is better) Translates to: DSGFSRNFQTHF*QRRQRPSAAST Trigger: TGTTGACGCTGCTGAGGGCCGCTGGCGCCGCTGCCAGAAGTGTGTCTGGAAGTTCCTAGAGAAGCCGGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 72 bp | ACCAGCCGATGCAAGCCGTCTCTACGTTCTCCAGCGTaGGGTGCTCCACGCGGTTGCCTTCGGAGTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: TSRCKPSLRSPA*GAPRGCLRSPP Trigger: TGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAGAGACGGCTTGCATCGGCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 72 bp | CGAGAACCCCCGGGCTTGCCTTCTGCACTGCTGGAGTaGAGCTCCATCAGCTCCAGCTCATGCTTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: REPPGLPSALLE*SSISSSSCLAA Trigger: GGCAGCCAAGCATGAGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGCAGAAGGCAAGCCCGGGGGTTCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | TCTCTACGTTCTCCAGCGTTGGGTGCTCCACGCGGTTaGCTTCGGAGTCCACCACTTGCAGCTCGGGTATGG | + |
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Preference number: 6 (lower is better) Translates to: SLRSPALGAPRG*LRSPPLAARVW Trigger: CCATACCCGAGCTGCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 72 bp | TGGGTGCTCCACGCGGTTGCCTTCGGAGTCCACCACTaGCAGCTCGGGTATGGTACCCATGCACATGACCAC | + |
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Preference number: 6 (lower is better) Translates to: WVLHAVAFGVHH*QLGYGTHAHDH Trigger: GTGGTCATGTGCATGGGTACCATACCCGAGCTGCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 72 bp | GTCTCTACGTTCTCCAGCGTTGGGTGCTCCACGCGGTaGCCTTCGGAGTCCACCACTTGCAGCTCGGGTATG | + |
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Preference number: 6 (lower is better) Translates to: VSTFSSVGCSTR*PSESTTCSSGM Trigger: CATACCCGAGCTGCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 90 bp | ATGCAAGCCGTCTCTACGTTCTCCAGCGTTGGGTGCTCCACGCGGTaGCCTTCGGAGTCCACCACTTGCAGCTCGGGTATGGTACCCATG | + |
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Preference number: 6 (lower is better) Translates to: MQAVSTFSSVGCSTR*PSESTTCSSGMVPM Trigger: CATGGGTACCATACCCGAGCTGCAAGTGGTGGACTCCGAAGGCAACCGCGTGGAGCACCCAACGCTGGAGAACGTAGAGACGGCTTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | GATGCGTGCGATGCGCATGATCCTCAGGGCCTGCACTaGCTGCTGTACGTTGGTCAGCTCCATCATTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: DACDAHDPQGLH*LLYVGQLHHSC Trigger: GCAAGAATGATGGAGCTGACCAACGTACAGCAGGCAGTGCAGGCCCTGAGGATCATGCGCATCGCACGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | GCACTGCTGGAGTTGAGCTCCATCAGCTCCAGCTCATaGTTGGCTGCCGTCTCCAGGACACGTTGTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ALLELSSISSSS*LAAVSRTRCLL Trigger: CAACAAACAACGTGTCCTGGAGACGGCAGCCAAGCATGAGCTGGAGCTGATGGAGCTCAACTCCAGCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS TCA 72 bp | GGGTCCTATGATGCTTCTCCTCTGTCAGCAGGGGAATaGAGGTATCGCTGTGTGAGAGCTTCAGCCGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: GSYDASPLSAGE*RYRCVRASAGY Trigger: GTAGCCGGCTGAAGCTCTCACACAGCGATACCTTCATTCCCCTGCTGACAGAGGAGAAGCATCATAGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | CACTGCCTGCTGTACGTTGGTCAGCTCCATCATTCTTaGGCCCAGGTGCGTGAGTGTGAGGCTCACATAGAA | + |
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Preference number: 6 (lower is better) Translates to: HCLLYVGQLHHS*AQVRECEAHIE Trigger: TTCTATGTGAGCCTCACACTCACGCACCTGGGCGCAAGAATGATGGAGCTGACCAACGTACAGCAGGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | TTGAAGATGCGTGCGATGCGCATGATCCTCAGGGCCTaGACTGCCTGCTGTACGTTGGTCAGCTCCATCATT | + |
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Preference number: 6 (lower is better) Translates to: LKMRAMRMILRA*TACCTLVSSII Trigger: AATGATGGAGCTGACCAACGTACAGCAGGCAGTGCAGGCCCTGAGGATCATGCGCATCGCACGCATCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS TCA 72 bp | AGCACATCCACGATGTTCATGAAGGACAGGGCAAAGTaGAGCTTGTTGGGCGATGAGAAGAGGCGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: STSTMFMKDRAK*SLLGDEKRRSR Trigger: CCTGCTGCGCCTCTTCTCATCGCCCAACAAGCTTCACTTTGCCCTGTCCTTCATGAACATCGTGGATGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | AGTTTCAGGATGGCTCTGCTCCATGGTGTAGCCCAGTaGGGAAAAGACGAAGATGCCCACGGCCAGATACAT | + |
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Preference number: 6 (lower is better) Translates to: SFRMALLHGVAQ*GKDEDAHGQIH Trigger: ATGTATCTGGCCGTGGGCATCTTCGTCTTTTCCGCACTGGGCTACACCATGGAGCAGAGCCATCCTGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | GGCAATGGCAATTACCCCACACAAGAAGCTGATGGCTaGGTTGAGCTTGCCCAGAGTGGTCTTGGGGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: GNGNYPTQEADG*VELAQSGLGVD Trigger: ATCTACCCCAAGACCACTCTGGGCAAGCTCAACGCAGCCATCAGCTTCTTGTGTGGGGTAATTGCCATTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS GCA 72 bp | GGAGTTGAGCTCCATCAGCTCCAGCTCATGCTTGGCTaGCGTCTCCAGGACACGTTGTTTGTTGTAGTACCT | + |
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Preference number: 6 (lower is better) Translates to: GVELHQLQLMLG*RLQDTLFVVVP Trigger: AGGTACTACAACAAACAACGTGTCCTGGAGACGGCAGCCAAGCATGAGCTGGAGCTGATGGAGCTCAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 72 bp | GTGATGATAGCCCACCAGAAGGACTGGGGGATGCTCTaGAACAGAGTTTCAGGATGGCTCTGCTCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: VMIAHQKDWGML*NRVSGWLCSMV Trigger: CACCATGGAGCAGAGCCATCCTGAAACTCTGTTCAAGAGCATCCCCCAGTCCTTCTGGTGGGCTATCATCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CCA 72 bp | GAAATAGTATACCTCAATGACACACTTGAACGCGTCTaGGTCCCGGTCAAAGTAGAATTCGCGCTTGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: EIVYLNDTLERV*VPVKVEFALAR Trigger: CCGGGCAAGCGCGAATTCTACTTTGACCGGGACCCAGACGCGTTCAAGTGTGTCATTGAGGTATACTATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 90 bp | CTCCATCAGCTCCAGCTCATGCTTGGCTGCCGTCTCCAGGACACGTaGTTTGTTGTAGTACCTGACAAAGTTGTTAATGATGGGGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LHQLQLMLGCRLQDT*FVVVPDKVVNDGVN Trigger: ATTCACCCCATCATTAACAACTTTGTCAGGTACTACAACAAACAACGTGTCCTGGAGACGGCAGCCAAGCATGAGCTGGAGCTGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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| CDS CAA 72 bp | CTCCAGCTCATGCTTGGCTGCCGTCTCCAGGACACGTaGTTTGTTGTAGTACCTGACAAAGTTGTTAATGAT | + |
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Preference number: 6 (lower is better) Translates to: LQLMLGCRLQDT*FVVVPDKVVND Trigger: ATCATTAACAACTTTGTCAGGTACTACAACAAACAACGTGTCCTGGAGACGGCAGCCAAGCATGAGCTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170580.3 |
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