Pregenerated sensors for KCNE4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047330Ensembl transcript IDs: ENSMUST00000057262.8, ENSMUST00000187432.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTCAGGGCTCAGACCAGGAAGCACATTGCTTGAACCCCAGCTCTaGTCGATCTCGCCTAAGTATGCCCTTCCAGGGTCCAGCTACGTG | + |
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Preference number: 1 (lower is better) Translates to: VSGLRPGSTLLEPQL*SISPKYALPGSSYV Trigger: CACGTAGCTGGACCCTGGAAGGGCATACTTAGGCGAGATCGAGCAGAGCTGGGGTTCAAGCAATGTGCTTCCTGGTCTGAGCCCTGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR TCA 90 bp | CCCTGGGCACAGACAGATGCTGCAGAAGTTACCCAGGGCCTCCAGTaGAAAAACACCACATTATCCAGCCAGATGCTGACCACAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: PWAQTDAAEVTQGLQ*KNTTLSSQMLTTDP Trigger: TGGGTCTGTGGTCAGCATCTGGCTGGATAATGTGGTGTTTTTTCACTGGAGGCCCTGGGTAACTTCTGCAGCATCTGTCTGTGCCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR CCA 90 bp | CACCACCACCCAGGCCCCAGAGTCAATGGTCATGCTGTATGTCTCTaGGACTTTTTCAGAGATGAGTCCCACAGGAACCTCAAGGACTGC | + |
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Preference number: 1 (lower is better) Translates to: HHHPGPRVNGHAVCL*DFFRDESHRNLKDC Trigger: GCAGTCCTTGAGGTTCCTGTGGGACTCATCTCTGAAAAAGTCCCAGAGACATACAGCATGACCATTGACTCTGGGGCCTGGGTGGTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR GCA 90 bp | AACCTCACAGTGAATGAGTGTCAGGGCTCAGACCAGGAAGCACATTaGTTGAACCCCAGCTCTGCTCGATCTCGCCTAAGTATGCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: NLTVNECQGSDQEAH*LNPSSARSRLSMPF Trigger: GAAGGGCATACTTAGGCGAGATCGAGCAGAGCTGGGGTTCAAGCAATGTGCTTCCTGGTCTGAGCCCTGACACTCATTCACTGTGAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR GCA 90 bp | CAATCTGTGAAGGTCAGGAGGACCACCATGAACAGCCATCCCGAATaGAGGCTTGGTTATGAGGAAGCTGACTGGCAAAGAAAGCCATGC | + |
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Preference number: 1 (lower is better) Translates to: QSVKVRRTTMNSHPE*RLGYEEADWQRKPC Trigger: GCATGGCTTTCTTTGCCAGTCAGCTTCCTCATAACCAAGCCTGCATTCGGGATGGCTGTTCATGGTGGTCCTCCTGACCTTCACAGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR CCA 90 bp | GCTCTAGGAAAATTAGCAAATCGAAACGAGTCCTTCAGCCTGCCCTaGGCAGTTGTCAGCCCTGGGCACAGACAGATGCTGCAGAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: ALGKLANRNESFSLP*AVVSPGHRQMLQKL Trigger: TAACTTCTGCAGCATCTGTCTGTGCCCAGGGCTGACAACTGCCCAGGGCAGGCTGAAGGACTCGTTTCGATTTGCTAATTTTCCTAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR TCA 90 bp | TGTAGGCAGAATCTTGTGATGACATGCCCAGAACCTCACAGTGAATaGGTGTCAGGGCTCAGACCAGGAAGCACATTGCTTGAACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: CRQNLVMTCPEPHSE*VSGLRPGSTLLEPQ Trigger: CTGGGGTTCAAGCAATGTGCTTCCTGGTCTGAGCCCTGACACTCATTCACTGTGAGGTTCTGGGCATGTCATCACAAGATTCTGCCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR GCA 90 bp | GTCAACACATCTTTCTCCAGACTAAGCGGCCAAAGGGGAAATACTTaGTCCAAACTTCCTCACACCAGGCTGTGGAGGATTTATCACACA | + |
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Preference number: 1 (lower is better) Translates to: VNTSFSRLSGQRGNT*SKLPHTRLWRIYHT Trigger: TGTGTGATAAATCCTCCACAGCCTGGTGTGAGGAAGTTTGGAGCAAGTATTTCCCCTTTGGCCGCTTAGTCTGGAGAAAGATGTGTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR GCA 90 bp | TGGAAGGAAGTATATACATCACTTTGTAACAGGCGCAGACAGACTTaGACCAAACCAGGATTAAGCAATGGAAAATGTGACAACGCACAT | + |
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Preference number: 1 (lower is better) Translates to: WKEVYTSLCNRRRQT*TKPGLSNGKCDNAH Trigger: ATGTGCGTTGTCACATTTTCCATTGCTTAATCCTGGTTTGGTGCAAGTCTGTCTGCGCCTGTTACAAAGTGATGTATATACTTCCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR CCA 90 bp | ACATGTGTACGAATTACCTTCTCCCTTTGCATTGTGCAAACAATCTaGGTTCTCTCTTCAGCTTTCTCCCACCTCCAAGTGAAATATATA | + |
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Preference number: 1 (lower is better) Translates to: TCVRITFSLCIVQTI*VLSSAFSHLQVKYI Trigger: TATATATTTCACTTGGAGGTGGGAGAAAGCTGAAGAGAGAACCCAGATTGTTTGCACAATGCAAAGGGAGAAGGTAATTCGTACACATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR CAA 90 bp | GAACCTCAAGGACTGCAGCTGAGCCTTGTCTCTCCCTGCCCCATTTaGGAGCTTGCCCTCAGTCTGTTCAATGTGGCAGCCGCAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: EPQGLQLSLVSPCPI*ELALSLFNVAAAEQ Trigger: TTGCTCTGCGGCTGCCACATTGAACAGACTGAGGGCAAGCTCCAAAATGGGGCAGGGAGAGACAAGGCTCAGCTGCAGTCCTTGAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGGGCTGCACAGCCTCAGGAGCCTCATGTAGGCAGAATCTTGTGATGACAGGCACAGACAGATGCTaGAGAAGTTACCCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PWGCTASGASCRQNLVMTGTDRC*RSYPGP Trigger: AGGCCCTGGGTAACTTCTGCAGCATCTGTCTGTGCC...TGTCATCACAAGATTCTGCCTACATGAGGCTCCTGAGGCTGTGCAGCCCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGGAGTTTTCTGCTTCCTTCTGGTCTTCTAAGGGCACAAGAGCCTGCTGCCTCAAGGACTGCAGCTaGGCCTTGTCTCTCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FGEFSASFWSSKGTRACCLKDCS*ALSLPA Trigger: GGCAGGGAGAGACAAGGCTCAGCTGCAGTCCTTGAG...GCAGCAGGCTCTTGTGCCCTTAGAAGACCAGAAGGAAGCAGAAAACTCCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR CAA 90 bp | GTCTGTTCAATGTGGCAGCCGCAGAGCAAAAGCGAAACCCGGCACTaGGCAAGTGTCTTCCCTCTGTCAAGTGTAGCTTACGGAGCTACC | + |
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Preference number: 2 (lower is better) Translates to: VCSMWQPQSKSETRH*ASVFPLSSVAYGAT Trigger: GGTAGCTCCGTAAGCTACACTTGACAGAGGGAAGACACTTGCCAAGTGCCGGGTTTCGCTTTTGCTCTGCGGCTGCCACATTGAACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR CAA 90 bp | CTCACAGTGAATGAGTGTCAGGGCTCAGACCAGGAAGCACATTGCTaGAACCCCAGCTCTGCTCGATCTCGCCTAAGTATGCCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LTVNECQGSDQEAHC*NPSSARSRLSMPFQ Trigger: CTGGAAGGGCATACTTAGGCGAGATCGAGCAGAGCTGGGGTTCAAGCAATGTGCTTCCTGGTCTGAGCCCTGACACTCATTCACTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTAACCCCTCATGGGGACATTAGTGACTGCTCTGTCTCCAATCCAGGGAGAGGCAGTTGTCAGCCCTaGGCACAGACAGATGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VLTPHGDISDCSVSNPGRGSCQP*AQTDAA Trigger: TGCAGCATCTGTCTGTGCCCAGGGCTGACAACTGCC...TCTCCCTGGATTGGAGACAGAGCAGTCACTAATGTCCCCATGAGGGGTTAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCACATGTGTCCTTTCTGGCCTCAGAAAACTAGGCTGGGAAAAAGAGCTGCAACCCAGGGCCTCCAGTaGAAAAACACCACATTATCC | + |
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Preference number: 2 (lower is better) Translates to: AHMCPFWPQKTRLGKRAATQGLQ*KNTTLS Trigger: GGATAATGTGGTGTTTTTTCACTGGAGGCCCTGGGT...TGCAGCTCTTTTTCCCAGCCTAGTTTTCTGAGGCCAGAAAGGACACATGTGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR GCA 90 bp | ACAACGCACATGTCTGTCGCAGTAAAGTTTCAGAATTCAAGTGATTCCAGGCACACGAGTCCTTCAGCCTaGCCTGGGCAGTTGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TTHMSVAVKFQNSSDSRHTSPSA*PGQLSA Trigger: GGCTGACAACTGCCCAGGGCAGGCTGAAGGACTCGT...GTGCCTGGAATCACTTGAATTCTGAAACTTTACTGCGACAGACATGTGCGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR CCA 90 bp | TATGCCCTTCCAGGGTCCAGCTACGTGACAAAACCCCATATTATGAGGCCCACAAGGCCCCAGAGTCAATaGTCATGCTGTATGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: YALPGSSYVTKPHIMRPTRPQSQ*SCCMSL Trigger: CAGAGACATACAGCATGACCATTGACTCTGGGGCCT...TGTGGGCCTCATAATATGGGGTTTTGTCACGTAGCTGGACCCTGGAAGGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGAATTCAAGTGATTCCAGGCACGAGGCCAAACTTAACTTGGCTTCTTTCTCCTTCAGCCTGCCCTaGGCAGTTGTCAGCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: FQNSSDSRHEAKLNLASFSFSLP*AVVSPG Trigger: CCCAGGGCTGACAACTGCCCAGGGCAGGCTGAAGGA...GAAAGAAGCCAAGTTAAGTTTGGCCTCGTGCCTGGAATCACTTGAATTCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCACATTGCTTGAACCCCAGCTCTGCTCGATCTCGCCTAAGTATGCCCTTCCACATGTGTCCTTTCTaGCCTCAGAAAACTAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: EAHCLNPSSARSRLSMPFHMCPF*PQKTRL Trigger: CAGCCTAGTTTTCTGAGGCCAGAAAGGACACATGTG...GAAGGGCATACTTAGGCGAGATCGAGCAGAGCTGGGGTTCAAGCAATGTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTCCCTTTAAATTTCTCTTTCCCTCGGTTGGGTGTGTTAACATCCTCCCACCCAGAACCTCACAGTaGATGAGTGTCAGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VAPFKFLFPSVGCVNILPPRTSQ*MSVRAQ Trigger: CTGAGCCCTGACACTCATTCACTGTGAGGTTCTGGG...TGGGAGGATGTTAACACACCCAACCGAGGGAAAGAGAAATTTAAAGGGAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGGAGTTTTCTGCTTCCTTCTGGTCTTCTAAGGGCACAAGAGCCTGCTGCGCTGGGAAAAAGAGCTaGAGCAGAGCTGTCAATGAT | + |
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Preference number: 2 (lower is better) Translates to: FGEFSASFWSSKGTRACCAGKKS*SRAVND Trigger: ATCATTGACAGCTCTGCTGCAGCTCTTTTTCCCAGC...GCAGCAGGCTCTTGTGCCCTTAGAAGACCAGAAGGAAGCAGAAAACTCCCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR CAA 90 bp | AGTCAACACATCTTTCTCCAGACTAAGCGGCCAAAGGGGAAATACTaGCTCCAAACTTCCTCACACCAGGCTGTGGAGGATTTATCACAC | + |
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Preference number: 2 (lower is better) Translates to: SQHIFLQTKRPKGKY*LQTSSHQAVEDLSH Trigger: GTGTGATAAATCCTCCACAGCCTGGTGTGAGGAAGTTTGGAGCAAGTATTTCCCCTTTGGCCGCTTAGTCTGGAGAAAGATGTGTTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGTCATGCTGTATGTCTCTGGGACTTTTTCAGAGATGAGTCCCACAGGAACCCCCATTTTGGAGCTTaGCCTCAGTCTGTTCAATGT | + |
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Preference number: 2 (lower is better) Translates to: NGHAVCLWDFFRDESHRNPHFGA*PQSVQC Trigger: ACATTGAACAGACTGAGGGCAAGCTCCAAAATGGGG...GTTCCTGTGGGACTCATCTCTGAAAAAGTCCCAGAGACATACAGCATGACCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR TCA 90 bp | CACACTCTGAATCTTAAAGTGAACAGAGGGCCCCTTTCCGCCTCTAACATAAATGGACTTTTTCAGAGATaGGTCCCACAGGAACCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HTLNLKVNRGPLSASNINGLFQR*VPQEPQ Trigger: TTGAGGTTCCTGTGGGACTCATCTCTGAAAAAGTCC...ATTTATGTTAGAGGCGGAAAGGGGCCCTCTGTTCACTTTAAGATTCAGAGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACCAAACCAGGATTAAGCAATGGAAAATGTGACAACGCACATGTCTGTCGCAAAGCCATGCTCACCTaGAATGCTGTAGAGTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: CTKPGLSNGKCDNAHVCRKAMLT*NAVEFK Trigger: CTTGAACTCTACAGCATTGCAGGTGAGCATGGCTTT...GCGACAGACATGTGCGTTGTCACATTTTCCATTGCTTAATCCTGGTTTGGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTTCCGCCTCTAACATAAATTACCTTTCTATCTCTGTGTCAAAACTGATTCTCCCTGCCCCATTTTaGAGCTTGCCCTCAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PLSASNINYLSISVSKLILPAPF*SLPSVC Trigger: ACAGACTGAGGGCAAGCTCCAAAATGGGGCAGGGAG...AATCAGTTTTGACACAGAGATAGAAAGGTAATTTATGTTAGAGGCGGAAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR CCA 90 bp | GTGACAACGCACATGTCTGTCGCAGTAAAGTTTCAGAATTCAAGTGATTCCAGGCCTCACACCAGGCTGTaGAGGATTTATCACACAGTA | + |
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Preference number: 2 (lower is better) Translates to: VTTHMSVAVKFQNSSDSRPHTRL*RIYHTV Trigger: TACTGTGTGATAAATCCTCCACAGCCTGGTGTGAGG...CCTGGAATCACTTGAATTCTGAAACTTTACTGCGACAGACATGTGCGTTGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR GCA 90 bp | AAACTTCCTCACACCAGGCTGTGGAGGATTTATCACACAGTACAAAGTCTAAAGGCTGGGAAAAAGAGCTaGAGCAGAGCTGTCAATGAT | + |
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Preference number: 2 (lower is better) Translates to: KLPHTRLWRIYHTVQSLKAGKKS*SRAVND Trigger: ATCATTGACAGCTCTGCTGCAGCTCTTTTTCCCAGC...CTTTAGACTTTGTACTGTGTGATAAATCCTCCACAGCCTGGTGTGAGGAAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACGCACATGTCTGTCGCAGTAAAGTTTCAGAATTCAAGTGATTCCAGGCACTATGAGGAAGCTGACTaGCAAAGAAAGCCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TTHMSVAVKFQNSSDSRHYEEAD*QRKPCS Trigger: TGAGCATGGCTTTCTTTGCCAGTCAGCTTCCTCATA...GTGCCTGGAATCACTTGAATTCTGAAACTTTACTGCGACAGACATGTGCGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTCCGCCTCTAACATAAATTACCTTTCTATCTCTGTGTCAAAACTGATTGAAAGCCTTGTCTCTCCCTaGCCCATTTTGGAGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSASNINYLSISVSKLIESLVSP*PILELA Trigger: GGCAAGCTCCAAAATGGGGCAGGGAGAGACAAGGCT...TTCAATCAGTTTTGACACAGAGATAGAAAGGTAATTTATGTTAGAGGCGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGACTTGCACCAAACCAGGATTAAGCAATGGAAAATGTGACAACGCACATCATGCTGTATGTCTCTaGGACTTTTTCAGAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: RQTCTKPGLSNGKCDNAHHAVCL*DFFRDE Trigger: CTCATCTCTGAAAAAGTCCCAGAGACATACAGCATG...ATGTGCGTTGTCACATTTTCCATTGCTTAATCCTGGTTTGGTGCAAGTCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR CCA 90 bp | GTGACAACGCACATGTCTGTCGCAGTAAAGTTTCAGAATTCAAGTGATTCCAGGATTGTGCAAACAATCTaGGTTCTCTCTTCAGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VTTHMSVAVKFQNSSDSRIVQTI*VLSSAF Trigger: GAAAGCTGAAGAGAGAACCCAGATTGTTTGCACAAT...CCTGGAATCACTTGAATTCTGAAACTTTACTGCGACAGACATGTGCGTTGTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR CCA 90 bp | TATCCAAAGTCTCCAACTGTGTCTTTAAGTCAACACATCTTTCTCCAGACTAAGCTCAGAAAACTAGGCTaGGAAAAAGAGCTGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: YPKSPTVSLSQHIFLQTKLRKLG*EKELQQ Trigger: CTGCTGCAGCTCTTTTTCCCAGCCTAGTTTTCTGAG...CTTAGTCTGGAGAAAGATGTGTTGACTTAAAGACACAGTTGGAGACTTTGGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTCCGCCTCTAACATAAATTACCTTTCTATCTCTGTGTCAAAACTGATTGAACTGCAGAGGAAACTATaGTGCCAGCTTCTTCAGTCG | + |
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Preference number: 2 (lower is better) Translates to: LSASNINYLSISVSKLIELQRKL*CQLLQS Trigger: CGACTGAAGAAGCTGGCAGCATAGTTTCCTCTGCAG...TTCAATCAGTTTTGACACAGAGATAGAAAGGTAATTTATGTTAGAGGCGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR CCA 90 bp | TATCCAAAGTCTCCAACTGTGTCTTTAAGTCAACACATCTTTCTCCAGACTAAGTATGAGGAAGCTGACTaGCAAAGAAAGCCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YPKSPTVSLSQHIFLQTKYEEAD*QRKPCS Trigger: TGAGCATGGCTTTCTTTGCCAGTCAGCTTCCTCATA...CTTAGTCTGGAGAAAGATGTGTTGACTTAAAGACACAGTTGGAGACTTTGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR-3UTR CCA 90 bp | TATCCAAAGTCTCCAACTGTGTCTTTAAGTCAACACATCTTTCTCCAGACTAAGATTGTGCAAACAATCTaGGTTCTCTCTTCAGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: YPKSPTVSLSQHIFLQTKIVQTI*VLSSAF Trigger: GAAAGCTGAAGAGAGAACCCAGATTGTTTGCACAAT...CTTAGTCTGGAGAAAGATGTGTTGACTTAAAGACACAGTTGGAGACTTTGGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR CCA 72 bp | CGAGTCCTTCAGCCTGCCCTGGGCAGTTGTCAGCCCTaGGCACAGACAGATGCTGCAGAAGTTACCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: RVLQPALGSCQP*AQTDAAEVTQG Trigger: GCCCTGGGTAACTTCTGCAGCATCTGTCTGTGCCCAGGGCTGACAACTGCCCAGGGCAGGCTGAAGGACTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR GCA 72 bp | GCTGAGCCTTGTCTCTCCCTGCCCCATTTTGGAGCTTaGCCTCAGTCTGTTCAATGTGGCAGCCGCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: AEPCLSLPHFGA*PQSVQCGSRRA Trigger: TGCTCTGCGGCTGCCACATTGAACAGACTGAGGGCAAGCTCCAAAATGGGGCAGGGAGAGACAAGGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR TCA 72 bp | AGAGATGAGTCCCACAGGAACCTCAAGGACTGCAGCTaGGCCTTGTCTCTCCCTGCCCCATTTTGGAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: RDESHRNLKDCS*ALSLPAPFWSL Trigger: CAAGCTCCAAAATGGGGCAGGGAGAGACAAGGCTCAGCTGCAGTCCTTGAGGTTCCTGTGGGACTCATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR GCA 72 bp | CCTCCCATCCACACGACTCTGCAGAGGAAACTATGCTaGCAGCTTCTTCAGTCGCATCCTGGGAAAGCCACA | + |
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Preference number: 3 (lower is better) Translates to: PPIHTTLQRKLC*QLLQSHPGKAT Trigger: TGTGGCTTTCCCAGGATGCGACTGAAGAAGCTGGCAGCATAGTTTCCTCTGCAGAGTCGTGTGGATGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR GCA 72 bp | GAACCTCAAGGACTGCAGCTGAGCCTTGTCTCTCCCTaGCCCATTTTGGAGCTTGCCCTCAGTCTGTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: EPQGLQLSLVSP*PILELALSLFN Trigger: ATTGAACAGACTGAGGGCAAGCTCCAAAATGGGGCAGGGAGAGACAAGGCTCAGCTGCAGTCCTTGAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR GCA 72 bp | GTGAATGAGTGTCAGGGCTCAGACCAGGAAGCACATTaGTTGAACCCCAGCTCTGCTCGATCTCGCCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: VNECQGSDQEAH*LNPSSARSRLS Trigger: ACTTAGGCGAGATCGAGCAGAGCTGGGGTTCAAGCAATGTGCTTCCTGGTCTGAGCCCTGACACTCATTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
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| 3UTR CCA 72 bp | AAATTAGCAAATCGAAACGAGTCCTTCAGCCTGCCCTaGGCAGTTGTCAGCCCTGGGCACAGACAGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: KLANRNESFSLP*AVVSPGHRQML Trigger: CAGCATCTGTCTGTGCCCAGGGCTGACAACTGCCCAGGGCAGGCTGAAGGACTCGTTTCGATTTGCTAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGAATTCAAGTGATTCCAGGCACGAGGCCAAACTTAACTTGGCTTCTTTCGCCTGCCCTGGGCAGTaGTCAGCCCTGGGCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FQNSSDSRHEAKLNLASFACPGQ*SALGTD Trigger: GTCTGTGCCCAGGGCTGACAACTGCCCAGGGCAGGC...GAAAGAAGCCAAGTTAAGTTTGGCCTCGTGCCTGGAATCACTTGAATTCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| 3UTR CCA 72 bp | CCAGGCCCCAGAGTCAATGGTCATGCTGTATGTCTCTaGGACTTTTTCAGAGATGAGTCCCACAGGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGPRVNGHAVCL*DFFRDESHRNL Trigger: GAGGTTCCTGTGGGACTCATCTCTGAAAAAGTCCCAGAGACATACAGCATGACCATTGACTCTGGGGCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGAGGCCCACATGTGTCCTTTCTGGCCTCAGAAAACTAGGCTGGGAAAAAGATCTCCCTGCCCCATTTaGGAGCTTGCCCTCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YEAHMCPFWPQKTRLGKRSPCPI*ELALSL Trigger: CAGACTGAGGGCAAGCTCCAAAATGGGGCAGGGAGA...TCTTTTTCCCAGCCTAGTTTTCTGAGGCCAGAAAGGACACATGTGGGCCTCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGATCTCGCCTAAGTATGCCCTTCCAGGGTCCAGCTACGTGACAAAACCCCATCCTTCTCCCTTTGCATaGTGCAAACAATCTGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SISPKYALPGSSYVTKPHPSPFA*CKQSGF Trigger: GAACCCAGATTGTTTGCACAATGCAAAGGGAGAAGG...ATGGGGTTTTGTCACGTAGCTGGACCCTGGAAGGGCATACTTAGGCGAGATCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR TCA 72 bp | TGGTCATGCTGTATGTCTCTGGGACTTTTTCAGAGATaGGTCCCACAGGAACCTCAAGGACTGCAGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WSCCMSLGLFQR*VPQEPQGLQLS Trigger: GCTCAGCTGCAGTCCTTGAGGTTCCTGTGGGACTCATCTCTGAAAAAGTCCCAGAGACATACAGCATGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTAACCCCTCATGGGGACATTAGTGACTGCTCTGTCTCCAATCCAGGGAGACCAAAGGGGAAATACTaGCTCCAAACTTCCTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: VLTPHGDISDCSVSNPGRPKGKY*LQTSSH Trigger: GTGTGAGGAAGTTTGGAGCAAGTATTTCCCCTTTGG...TCTCCCTGGATTGGAGACAGAGCAGTCACTAATGTCCCCATGAGGGGTTAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR TCA 72 bp | GCAGAATCTTGTGATGACATGCCCAGAACCTCACAGTaGATGAGTGTCAGGGCTCAGACCAGGAAGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: AESCDDMPRTSQ*MSVRAQTRKHI Trigger: AATGTGCTTCCTGGTCTGAGCCCTGACACTCATTCACTGTGAGGTTCTGGGCATGTCATCACAAGATTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR GCA 72 bp | TCTTTCTCCAGACTAAGCGGCCAAAGGGGAAATACTTaGTCCAAACTTCCTCACACCAGGCTGTGGAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: SFSRLSGQRGNT*SKLPHTRLWRI Trigger: AATCCTCCACAGCCTGGTGTGAGGAAGTTTGGAGCAAGTATTTCCCCTTTGGCCGCTTAGTCTGGAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR TCA 72 bp | AATCTTGTGATGACATGCCCAGAACCTCACAGTGAATaGGTGTCAGGGCTCAGACCAGGAAGCACATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLVMTCPEPHSE*VSGLRPGSTLL Trigger: AAGCAATGTGCTTCCTGGTCTGAGCCCTGACACTCATTCACTGTGAGGTTCTGGGCATGTCATCACAAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGACTTGCACCAAACCAGGATTAAGCAATGGAAAATGTGACAACGCACATCAGGAAGCACATTGCTaGAACCCCAGCTCTGCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: RQTCTKPGLSNGKCDNAHQEAHC*NPSSAR Trigger: TCGAGCAGAGCTGGGGTTCAAGCAATGTGCTTCCTG...ATGTGCGTTGTCACATTTTCCATTGCTTAATCCTGGTTTGGTGCAAGTCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR CCA 72 bp | CGAATTACCTTCTCCCTTTGCATTGTGCAAACAATCTaGGTTCTCTCTTCAGCTTTCTCCCACCTCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RITFSLCIVQTI*VLSSAFSHLQV Trigger: CACTTGGAGGTGGGAGAAAGCTGAAGAGAGAACCCAGATTGTTTGCACAATGCAAAGGGAGAAGGTAATTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR TCA 72 bp | GCTCACCTGCAATGCTGTAGAGTTCAAGCTCACAGGTaGGACAAAAGCTCAGATGAGGTCATAGCTTATACT | + |
|
Preference number: 3 (lower is better) Translates to: AHLQCCRVQAHR*DKSSDEVIAYT Trigger: AGTATAAGCTATGACCTCATCTGAGCTTTTGTCTCACCTGTGAGCTTGAACTCTACAGCATTGCAGGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR GCA 72 bp | AGACATGTGTACGAATTACCTTCTCCCTTTGCATTGTaGAAACAATCTGGGTTCTCTCTTCAGCTTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RHVYELPSPFAL*KQSGFSLQLSP Trigger: GGGAGAAAGCTGAAGAGAGAACCCAGATTGTTTGCACAATGCAAAGGGAGAAGGTAATTCGTACACATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR GCA 72 bp | CTTATAGTGTTAACCCCTCATGGGGACATTAGTGACTaGTCTGTCTCCAATCCAGGGAGAGTTCAGATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LIVLTPHGDISD*SVSNPGRVQIN Trigger: ATTTATCTGAACTCTCCCTGGATTGGAGACAGAGCAGTCACTAATGTCCCCATGAGGGGTTAACACTATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR GCA 72 bp | GTATATACATCACTTTGTAACAGGCGCAGACAGACTTaGACCAAACCAGGATTAAGCAATGGAAAATGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VYTSLCNRRRQT*TKPGLSNGKCD Trigger: GTCACATTTTCCATTGCTTAATCCTGGTTTGGTGCAAGTCTGTCTGCGCCTGTTACAAAGTGATGTATATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGAATTCAAGTGATTCCAGGCACGAGGCCAAACTTAACTTGGCTTCTTTCAATTACCTTCTCCCTTaGCATTGTGCAAACAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: FQNSSDSRHEAKLNLASFNYLLP*HCANNL Trigger: CAGATTGTTTGCACAATGCAAAGGGAGAAGGTAATT...GAAAGAAGCCAAGTTAAGTTTGGCCTCGTGCCTGGAATCACTTGAATTCTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS-3UTR CCA 90 bp | TCGATCTCGCCTAAGTATGCCCTTCCAGGGTCCAGCTACGTGACAAAACCCCATACTCGAGGGGGCTGCTaGAGGCTGCAGCGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SISPKYALPGSSYVTKPHTRGGC*RLQRWG Trigger: ACCCCAGCGCTGCAGCCTCCAGCAGCCCCCTCGAGT...ATGGGGTTTTGTCACGTAGCTGGACCCTGGAAGGGCATACTTAGGCGAGATCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS-3UTR GCA 90 bp | TCGATCTCGCCTAAGTATGCCCTTCCAGGGTCCAGCTACGTGACAAAACCCCATAAGAGTGCAGGACAGTaGCGGCGCCACACTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SISPKYALPGSSYVTKPHKSAGQ*RRHTLL Trigger: CAGGAGAGTGTGGCGCCGGCACTGTCCTGCACTCTT...ATGGGGTTTTGTCACGTAGCTGGACCCTGGAAGGGCATACTTAGGCGAGATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCCCTTTAAATTTCTCTTTCCCTCGGTTGGGTGTGTTAACATCCTCCCAACTCGAGGGGGCTGCTaGAGGCTGCAGCGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VAPFKFLFPSVGCVNILPTRGGC*RLQRWG Trigger: ACCCCAGCGCTGCAGCCTCCAGCAGCCCCCTCGAGT...TGGGAGGATGTTAACACACCCAACCGAGGGAAAGAGAAATTTAAAGGGAGCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGGCTGCACAGCCTCAGGAGCCTCATGTAGGCAGAATCTTGTGATGACAGCATATTCAGCATCATaGGCACCTGCCCTGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWGCTASGASCRQNLVMTAYSAS*APALTS Trigger: TGAGGTCAGGGCAGGTGCCCATGATGCTGAATATGC...TGTCATCACAAGATTCTGCCTACATGAGGCTCCTGAGGCTGTGCAGCCCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTAACCCCTCATGGGGACATTAGTGACTGCTCTGTCTCCAATCCAGGGAGACTTCACTGCTGTCGTTaGGAGGCGTCTCGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLTPHGDISDCSVSNPGRLHCCR*EASRRS Trigger: AGACCTCCGAGACGCCTCTCAACGACAGCAGTGAAG...TCTCCCTGGATTGGAGACAGAGCAGTCACTAATGTCCCCATGAGGGGTTAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAATTCAAGTGATTCCAGGCACGAGGCCAAACTTAACTTGGCTTCTTTCGGGACTCGAGGGGGCTaGTGGAGGCTGCAGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQNSSDSRHEAKLNLASFGTRGG*WRLQRW Trigger: CCAGCGCTGCAGCCTCCAGCAGCCCCCTCGAGTCCC...GAAAGAAGCCAAGTTAAGTTTGGCCTCGTGCCTGGAATCACTTGAATTCTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR CAA 72 bp | ATGTGGCAGCCGCAGAGCAAAAGCGAAACCCGGCACTaGGCAAGTGTCTTCCCTCTGTCAAGTGTAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: MWQPQSKSETRH*ASVFPLSSVAY Trigger: GTAAGCTACACTTGACAGAGGGAAGACACTTGCCAAGTGCCGGGTTTCGCTTTTGCTCTGCGGCTGCCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS-3UTR GCA 90 bp | TCTAATCGAATGCCACAGGCACACATTAAAGATACTTACAGCCCATCAGATCTAGGGACTCGAGGGGGCTaGTGGAGGCTGCAGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNRMPQAHIKDTYSPSDLGTRGG*WRLQRW Trigger: CCAGCGCTGCAGCCTCCAGCAGCCCCCTCGAGTCCC...TAGATCTGATGGGCTGTAAGTATCTTTAATGTGTGCCTGTGGCATTCGATTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS-3UTR GCA 90 bp | GCCCACATGTGTCCTTTCTGGCCTCAGAAAACTAGGCTGGGAAAAAGAGCTGCATCCTGGATGGGAAGGTaGACATCAGGAGAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHMCPFWPQKTRLGKRAASWMGR*TSGEED Trigger: GTCCTCCTCTCCTGATGTGCACCTTCCCATCCAGGA...TGCAGCTCTTTTTCCCAGCCTAGTTTTCTGAGGCCAGAAAGGACACATGTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| 3UTR CAA 72 bp | AATGAGTGTCAGGGCTCAGACCAGGAAGCACATTGCTaGAACCCCAGCTCTGCTCGATCTCGCCTAAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NECQGSDQEAHC*NPSSARSRLSM Trigger: CATACTTAGGCGAGATCGAGCAGAGCTGGGGTTCAAGCAATGTGCTTCCTGGTCTGAGCCCTGACACTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS-3UTR CCA 90 bp | TATGCCCTTCCAGGGTCCAGCTACGTGACAAAACCCCATATTATGAGGCCCACAACAACAGCAGAAGGCTaGACTTCTTCTCCCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YALPGSSYVTKPHIMRPTTTAEG*TSSPAS Trigger: AGAGGCGGGAGAAGAAGTCCAGCCTTCTGCTGTTGT...TGTGGGCCTCATAATATGGGGTTTTGTCACGTAGCTGGACCCTGGAAGGGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS-3UTR CCA 90 bp | GTCAACACATCTTTCTCCAGACTAAGCGGCCAAAGGGGAAATACTTGCTCCAAACCCCCTCCTCCTGGATaGGAAGGTGCACATCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VNTSFSRLSGQRGNTCSKPPPPG*EGAHQE Trigger: CTCCTGATGTGCACCTTCCCATCCAGGAGGAGGGGG...TTTGGAGCAAGTATTTCCCCTTTGGCCGCTTAGTCTGGAGAAAGATGTGTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGGGAGTTTTCTGCTTCCTTCTGGTCTTCTAAGGGCACAAGAGCCTGCTGCTCATGTAGCCCAGCATaGTTCCGATCAGGAAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: FGEFSASFWSSKGTRACCSCSPA*FRSGKR Trigger: GCGTTTTCCTGATCGGAATCATGCTGGGCTACATGA...GCAGCAGGCTCTTGTGCCCTTAGAAGACCAGAAGGAAGCAGAAAACTCCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTCCAGCTACGTGACAAAACCCCATATTATGAGGCCCACATGTGTCCTTTCGGCGCCACACTCTCCTaGAGCATATTCAGCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RVQLRDKTPYYEAHMCPFGATLS*SIFSIM Trigger: CATGATGCTGAATATGCTGCAGGAGAGTGTGGCGCC...GAAAGGACACATGTGGGCCTCATAATATGGGGTTTTGTCACGTAGCTGGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| 3UTR CAA 72 bp | ATCTTTCTCCAGACTAAGCGGCCAAAGGGGAAATACTaGCTCCAAACTTCCTCACACCAGGCTGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IFLQTKRPKGKY*LQTSSHQAVED Trigger: ATCCTCCACAGCCTGGTGTGAGGAAGTTTGGAGCAAGTATTTCCCCTTTGGCCGCTTAGTCTGGAGAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR CAA 72 bp | GCTGGGAAAAAGAGCTGCAGCAGAGCTGTCAATGATTaGGCCTTGTATAACCCCACCATTACCCAATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGKKSCSRAVND*ALYNPTITQSV Trigger: CACAGATTGGGTAATGGTGGGGTTATACAAGGCCAAATCATTGACAGCTCTGCTGCAGCTCTTTTTCCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCTCCCTTTAAATTTCTCTTTCCCTCGGTTGGGTGTGTTAACATCCTCCCATCATGTAGCCCAGCATaGTTCCGATCAGGAAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: VAPFKFLFPSVGCVNILPSCSPA*FRSGKR Trigger: GCGTTTTCCTGATCGGAATCATGCTGGGCTACATGA...TGGGAGGATGTTAACACACCCAACCGAGGGAAAGAGAAATTTAAAGGGAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCGCCTCTAACATAAATTACCTTTCTATCTCTGTGTCAAAACTGATTTCAGCCCCCTCCTCCTaGATGGGAAGGTGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSASNINYLSISVSKLISAPSS*MGRCTS Trigger: TGATGTGCACCTTCCCATCCAGGAGGAGGGGGCTGA...AATCAGTTTTGACACAGAGATAGAAAGGTAATTTATGTTAGAGGCGGAAAGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAATTCAAGTGATTCCAGGCACGAGGCCAAACTTAACTTGGCTTCTTTCTCTTCTCCCGCCTCTTaGATTTCATGTAGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQNSSDSRHEAKLNLASFSSPAS*ISCSPA Trigger: TGCTGGGCTACATGAAATCCAAGAGGCGGGAGAAGA...GAAAGAAGCCAAGTTAAGTTTGGCCTCGTGCCTGGAATCACTTGAATTCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| 3UTR CAA 72 bp | CTTGGCTTCTTTCAACTTAAACGGCCCCCTTTGGAGTaGATCCACACTCTGAATCTTAAAGTGAACAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFFQLKRPPLE*IHTLNLKVNRG Trigger: CCCTCTGTTCACTTTAAGATTCAGAGTGTGGATCAACTCCAAAGGGGGCCGTTTAAGTTGAAAGAAGCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| 3UTR CAA 72 bp | TTCAGACATGTGTACGAATTACCTTCTCCCTTTGCATaGTGCAAACAATCTGGGTTCTCTCTTCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRHVYELPSPFA*CKQSGFSLQLS Trigger: AGAAAGCTGAAGAGAGAACCCAGATTGTTTGCACAATGCAAAGGGAGAAGGTAATTCGTACACATGTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS CCA 90 bp | GGCGTCTCGGAGGTCTCCTCCAGCTCGTCATCAGCCCCCTCCTCCTaGATGGGAAGGTGCACATCAGGAGAGGAGGACTCGGAGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVSEVSSSSSSAPSS*MGRCTSGEEDSELT Trigger: TGTGAGCTCCGAGTCCTCCTCTCCTGATGTGCACCTTCCCATCCAGGAGGAGGGGGCTGATGACGAGCTGGAGGAGACCTCCGAGACGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS CCA 90 bp | TCTCGGAGGTCTCCTCCAGCTCGTCATCAGCCCCCTCCTCCTGGATaGGAAGGTGCACATCAGGAGAGGAGGACTCGGAGCTCACACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRRSPPARHQPPPPG*EGAHQERRTRSSHC Trigger: ACAGTGTGAGCTCCGAGTCCTCCTCTCCTGATGTGCACCTTCCCATCCAGGAGGAGGGGGCTGATGACGAGCTGGAGGAGACCTCCGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS GCA 90 bp | ACTGCTGTTACTAGGCACATGGGACTCGAGGGGGCTGCTGGAGGCTaGAGCGCTGGGGTATGTGCTGTTCAGAGGCTCCATCCTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TAVTRHMGLEGAAGG*SAGVCAVQRLHPQH Trigger: ATGCTGAGGATGGAGCCTCTGAACAGCACATACCCCAGCGCTGCAGCCTCCAGCAGCCCCCTCGAGTCCCATGTGCCTAGTAACAGCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057262.8 ENSMUST00000187432.2 |
||
| CDS GCA 90 bp | GCCGGCGCCACACTCTCCTGCAGCATATTCAGCATCATGGGCACCTaGCCTGACCTCAAGCCGGACATCATAGGTAGCGGCTTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGATLSCSIFSIMGT*PDLKPDIIGSGFIA Trigger: GGCTATGAAGCCGCTACCTATGATGTCCGGCTTGAGGTCAGGGCAGGTGCCCATGATGCTGAATATGCTGCAGGAGAGTGTGGCGCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS GCA 90 bp | TCCATCGAGCAAAGAGTGCAGGACAGTGCCGGCGCCACACTCTCCTaGAGCATATTCAGCATCATGGGCACCTGCCCTGACCTCAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SIEQRVQDSAGATLS*SIFSIMGTCPDLKP Trigger: CGGCTTGAGGTCAGGGCAGGTGCCCATGATGCTGAATATGCTGCAGGAGAGTGTGGCGCCGGCACTGTCCTGCACTCTTTGCTCGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS GCA 90 bp | GGAGCTCACACTGTCCCCTTCCATCGAGCAAAGAGTGCAGGACAGTaGCGGCGCCACACTCTCCTGCAGCATATTCAGCATCATGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GAHTVPFHRAKSAGQ*RRHTLLQHIQHHGH Trigger: GTGCCCATGATGCTGAATATGCTGCAGGAGAGTGTGGCGCCGGCACTGTCCTGCACTCTTTGCTCGATGGAAGGGGACAGTGTGAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS GCA 90 bp | AGGAGGACTCGGAGCTCACACTGTCCCCTTCCATCGAGCAAAGAGTaGAGGACAGTGCCGGCGCCACACTCTCCTGCAGCATATTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRTRSSHCPLPSSKE*RTVPAPHSPAAYSA Trigger: TGCTGAATATGCTGCAGGAGAGTGTGGCGCCGGCACTGTCCTGCACTCTTTGCTCGATGGAAGGGGACAGTGTGAGCTCCGAGTCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS TCA 90 bp | AGGAATTCTGGTGGATGTTCTCGGAAGAGCCTTCACTGCTGTCGTTaGGAGGCGTCTCGGAGGTCTCCTCCAGCTCGTCATCAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RNSGGCSRKSLHCCR*EASRRSPPARHQPP Trigger: AGGGGGCTGATGACGAGCTGGAGGAGACCTCCGAGACGCCTCTCAACGACAGCAGTGAAGGCTCTTCCGAGAACATCCACCAGAATTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS-3UTR CAA 90 bp | AGACCAGGAAGCACATTGCTTGAACCCCAGCTCTGCTCGATCTCGCCTAAGTATAGCCTCTCCTCGTCTTaGTACAACAGCAGAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPGSTLLEPQLCSISPKYSLSSS*YNSRRL Trigger: CAGCCTTCTGCTGTTGTACAAAGACGAGGAGAGGCT...ATACTTAGGCGAGATCGAGCAGAGCTGGGGTTCAAGCAATGTGCTTCCTGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS TCA 72 bp | GGTGGATGTTCTCGGAAGAGCCTTCACTGCTGTCGTTaGGAGGCGTCTCGGAGGTCTCCTCCAGCTCGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGCSRKSLHCCR*EASRRSPPARH Trigger: ATGACGAGCTGGAGGAGACCTCCGAGACGCCTCTCAACGACAGCAGTGAAGGCTCTTCCGAGAACATCCACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
||
| CDS CAA 72 bp | TGGTGGATGTTCTCGGAAGAGCCTTCACTGCTGTCGTaGAGAGGCGTCTCGGAGGTCTCCTCCAGCTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: WWMFSEEPSLLS*RGVSEVSSSSS Trigger: TGACGAGCTGGAGGAGACCTCCGAGACGCCTCTCAACGACAGCAGTGAAGGCTCTTCCGAGAACATCCACCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| CDS GCA 72 bp | ACACTCTCCTGCAGCATATTCAGCATCATGGGCACCTaGCCTGACCTCAAGCCGGACATCATAGGTAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: TLSCSIFSIMGT*PDLKPDIIGSG Trigger: GCCGCTACCTATGATGTCCGGCTTGAGGTCAGGGCAGGTGCCCATGATGCTGAATATGCTGCAGGAGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| CDS GCA 72 bp | ACTGTCCCCTTCCATCGAGCAAAGAGTGCAGGACAGTaGCGGCGCCACACTCTCCTGCAGCATATTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: TVPFHRAKSAGQ*RRHTLLQHIQH Trigger: ATGCTGAATATGCTGCAGGAGAGTGTGGCGCCGGCACTGTCCTGCACTCTTTGCTCGATGGAAGGGGACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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| CDS CCA 72 bp | ACAGCCTCTCCTCGTCTTTGTACAACAGCAGAAGGCTaGACTTCTTCTCCCGCCTCTTGGATTTCATGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TASPRLCTTAEG*TSSPASWISCS Trigger: GCTACATGAAATCCAAGAGGCGGGAGAAGAAGTCCAGCCTTCTGCTGTTGTACAAAGACGAGGAGAGGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057262.8 |
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