Pregenerated sensors for KCNE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035165Ensembl transcript IDs: ENSMUST00000049333.13, ENSMUST00000170954.10, ENSMUST00000178946.9, ENSMUST00000179842.3, ENSMUST00000207358.2, ENSMUST00000207995.2, ENSMUST00000208260.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTaGTTGTCCATACTTTATATATATGTGTTCATGGGCTCTGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LSAPFPFATASSSTC*LSILYIYVFMGSEF Trigger: AAACTCAGAGCCCATGAACACATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR TCA 90 bp | TTCTCTGGTCCTAATAATGACCTAATCCTCTTACCAGTTTCCTGTTaGTCTTACATAGATACACTGTGGCTTGATATGGTTGAGTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: FSGPNNDLILLPVSC*SYIDTLWLDMVELS Trigger: ACTCAACTCAACCATATCAAGCCACAGTGTATCTATGTAAGATCAACAGGAAACTGGTAAGAGGATTAGGTCATTATTAGGACCAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCTTACCAGTTTCCTGTTaGTCTTACATAGATACACTG | + |
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Preference number: 2 (lower is better) Translates to: SFCPISLRHSFLFYLLVVLPVSC*SYIDTL Trigger: CAGTGTATCTATGTAAGATCAACAGGAAACTGGTAA...GACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCATCTGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCAGTCCCTACATAGATACACTGTaGCTTGATATGGTTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: AHLCLEKCLIHKTGPISPYIDTL*LDMVEL Trigger: CAACTCAACCATATCAAGCCACAGTGTATCTATGTA...GGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACAGATGCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCATCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTTACATAGATACACTGTaGCTTGATATGGTTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: QSIFLPHFPSPQLPLLLAYIDTL*LDMVEL Trigger: CAACTCAACCATATCAAGCCACAGTGTATCTATGTA...AGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGATGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR CAA 90 bp | TCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTaGTCCATACTTTATATATATGTGTTCATGGGCTCTGAGTTTATA | + |
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Preference number: 2 (lower is better) Translates to: SAPFPFATASSSTCW*SILYIYVFMGSEFI Trigger: TATAAACTCAGAGCCCATGAACACATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCAGTCCCTCTTCTTACCAGTTTCCTGTTaGTCTTACATAGATACACTG | + |
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Preference number: 2 (lower is better) Translates to: SVSRKMSHPQDWAYQSLFLPVSC*SYIDTL Trigger: CAGTGTATCTATGTAAGATCAACAGGAAACTGGTAA...GAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCATCCACAAGACTGGGCCTATCAGTCCCTCTTCTCTGGTCCTAATAATGACTTACCAGTTTCCTGTTaGTCTTACATAGATACACTG | + |
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Preference number: 2 (lower is better) Translates to: SHPQDWAYQSLFSGPNNDLPVSC*SYIDTL Trigger: CAGTGTATCTATGTAAGATCAACAGGAAACTGGTAA...GTCATTATTAGGACCAGAGAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR-3UTR CCA 90 bp | GATTATATATCCAGAGCATCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTACATAGATACACTGTaGCTTGATATGGTTGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: DYISRASFCPISLRHSFLYIDTL*LDMVEL Trigger: CAACTCAACCATATCAAGCCACAGTGTATCTATGTA...GAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGATGCTCTGGATATATAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCAGTCCCTCTTCTACATAGATACACTGTaGCTTGATATGGTTGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SVSRKMSHPQDWAYQSLFYIDTL*LDMVEL Trigger: CAACTCAACCATATCAAGCCACAGTGTATCTATGTA...GAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCCATACTTTATATATATGTACATAGATACACTGTaGCTTGATATGGTTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: PSPQLPLLLAGCPYFIYMYIDTL*LDMVEL Trigger: CAACTCAACCATATCAAGCCACAGTGTATCTATGTA...CATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR CCA 72 bp | GCATCTGTGTCTCGAAAAATGTCTCATCCACAAGACTaGGCCTATCAGTCCCTCTTCTCTGGTCCTAATAAT | + |
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Preference number: 3 (lower is better) Translates to: ASVSRKMSHPQD*AYQSLFSGPNN Trigger: ATTATTAGGACCAGAGAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACAGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR GCA 72 bp | GCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTaGTGGTTGTCCATACTTTATATATATGTGTTCATG | + |
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Preference number: 3 (lower is better) Translates to: APFPFATASSST*WLSILYIYVFM Trigger: CATGAACACATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR CCA 72 bp | CCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTaGTTGTCCATACTTTATATATATGTGTTCATGGGC | + |
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Preference number: 3 (lower is better) Translates to: PFPFATASSSTC*LSILYIYVFMG Trigger: GCCCATGAACACATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR-3UTR CAA 90 bp | GATTATATATCCAGAGCATCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCCTTACCAGTTTCCTGTaGATCTTACATAGATACACT | + |
|
Preference number: 3 (lower is better) Translates to: DYISRASFCPISLRHSFLLTSFL*ILHRYT Trigger: AGTGTATCTATGTAAGATCAACAGGAAACTGGTAAG...GAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGATGCTCTGGATATATAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCAGTCCCTCTTCTCCTTACCAGTTTCCTGTaGATCTTACATAGATACACT | + |
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Preference number: 3 (lower is better) Translates to: CVSKNVSSTRLGLSVPLLLTSFL*ILHRYT Trigger: AGTGTATCTATGTAAGATCAACAGGAAACTGGTAAG...GAGAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR-3UTR CAA 90 bp | ATAATGCGCATCTGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCACTTACCAGTTTCCTGTaGATCTTACATAGATACACT | + |
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Preference number: 3 (lower is better) Translates to: IMRICVSKNVSSTRLGLSLTSFL*ILHRYT Trigger: AGTGTATCTATGTAAGATCAACAGGAAACTGGTAAG...TGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACAGATGCGCATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCCATACTTTATATATATCTTACCAGTTTCCTGTaGATCTTACATAGATACACT | + |
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Preference number: 3 (lower is better) Translates to: PFATASSSTCWLSILYIYLTSFL*ILHRYT Trigger: AGTGTATCTATGTAAGATCAACAGGAAACTGGTAAG...ATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR TCA 72 bp | CCTAATAATGACCTAATCCTCTTACCAGTTTCCTGTTaGTCTTACATAGATACACTGTGGCTTGATATGGTT | + |
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Preference number: 3 (lower is better) Translates to: PNNDLILLPVSC*SYIDTLWLDMV Trigger: AACCATATCAAGCCACAGTGTATCTATGTAAGATCAACAGGAAACTGGTAAGAGGATTAGGTCATTATTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR CCA 90 bp | GAGCATCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGATTGTCTGGCCCTaGTCCTGGCCCAGGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: EHLSAPFPFATASSSTCWLIVWP*SWPRPA Trigger: TGCCGGCCTGGGCCAGGACCAGGGCCAGACAATCAA...CCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGATGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR CCA 90 bp | GTTGAGTTCCGGAGGCACCAGAAGACAATCCTCAGACATTGTAATCTTCCATTGGTCTGGCCCTGGTCCTaGCCCAGGCCGGCAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VEFRRHQKTILRHCNLPLVWPWS*PRPAEQ Trigger: TTGCTCTGCCGGCCTGGGCCAGGACCAGGGCCAGAC...CAATGGAAGATTACAATGTCTGAGGATTGTCTTCTGGTGCCTCCGGAACTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR CCA 90 bp | CTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCCGCCTTCAGCACAGCATaGAGGCTCATGTACCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSAPFPFATASSSTCWLSAFSTA*RLMYQV Trigger: GACCTGGTACATGAGCCTCCATGCTGTGCTGAAGGC...GGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCACCAGAAGACAATCCTCAGACATTGTAATCTTCCATTGTCTTCAGGTTGTCTGGCCCTGGTCCTaGCCCAGGCCGGCAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: GGTRRQSSDIVIFHCLQVVWPWS*PRPAEQ Trigger: TTGCTCTGCCGGCCTGGGCCAGGACCAGGGCCAGAC...AACCTGAAGACAATGGAAGATTACAATGTCTGAGGATTGTCTTCTGGTGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR TCA 90 bp | TCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCCGACGATCCTCAGTTTaGTTGTCTGGCCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SFCPISLRHSFLFYLLVVRRSSV*LSGPGP Trigger: AGGACCAGGGCCAGACAATCAAACTGAGGATCGTCG...GACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR CCA 90 bp | GCGCATCTGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCAGTCCCGCCTTCAGCACAGCATaGAGGCTCATGTACCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: AHLCLEKCLIHKTGPISPAFSTA*RLMYQV Trigger: GACCTGGTACATGAGCCTCCATGCTGTGCTGAAGGC...GGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACAGATGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR CCA 90 bp | CCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCCATACTTTATATATATGGTCTGGCCCTGGTCCTaGCCCAGGCCGGCAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PSPQLPLLLAGCPYFIYMVWPWS*PRPAEQ Trigger: TTGCTCTGCCGGCCTGGGCCAGGACCAGGGCCAGAC...CATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR CCA 90 bp | GACTGGGCCTATCAGTCCCTCTTCTCTGGTCCTAATAATGACCTAATCCTCTTATTGATTGTCTGGCCCTaGTCCTGGCCCAGGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: DWAYQSLFSGPNNDLILLLIVWP*SWPRPA Trigger: TGCCGGCCTGGGCCAGGACCAGGGCCAGACAATCAA...TAAGAGGATTAGGTCATTATTAGGACCAGAGAAGAGGGACTGATAGGCCCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR CCA 90 bp | AAAGATTATATATCCAGAGCATCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCTTGATTGTCTGGCCCTaGTCCTGGCCCAGGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: KDYISRASFCPISLRHSFLIVWP*SWPRPA Trigger: TGCCGGCCTGGGCCAGGACCAGGGCCAGACAATCAA...GAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGATGCTCTGGATATATAATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR TCA 90 bp | TCTGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCAGTCCCTCTTCCGACGATCCTCAGTTTaGTTGTCTGGCCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SVSRKMSHPQDWAYQSLFRRSSV*LSGPGP Trigger: AGGACCAGGGCCAGACAATCAAACTGAGGATCGTCG...GAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR CCA 90 bp | CCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCCATACTTTAGCCTTCAGCACAGCATaGAGGCTCATGTACCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PISLRHSFLFYLLVVHTLAFSTA*RLMYQV Trigger: GACCTGGTACATGAGCCTCCATGCTGTGCTGAAGGC...TAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR CCA 90 bp | GATTATATATCCAGAGCATCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCGCCTTCAGCACAGCATaGAGGCTCATGTACCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: DYISRASFCPISLRHSFLAFSTA*RLMYQV Trigger: GACCTGGTACATGAGCCTCCATGCTGTGCTGAAGGC...GAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGATGCTCTGGATATATAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR TCA 90 bp | CGGAGGCACCAGAAGACAATCCTCAGACATTGTAATCTTCCATTGTCTTCAGGTCGACGATCCTCAGTTTaGTTGTCTGGCCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: RRHQKTILRHCNLPLSSGRRSSV*LSGPGP Trigger: AGGACCAGGGCCAGACAATCAAACTGAGGATCGTCG...ACCTGAAGACAATGGAAGATTACAATGTCTGAGGATTGTCTTCTGGTGCCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR TCA 90 bp | GTTGAGTTCCGGAGGCACCAGAAGACAATCCTCAGACATTGTAATCTTCCATTGCGACGATCCTCAGTTTaGTTGTCTGGCCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VEFRRHQKTILRHCNLPLRRSSV*LSGPGP Trigger: AGGACCAGGGCCAGACAATCAAACTGAGGATCGTCG...CAATGGAAGATTACAATGTCTGAGGATTGTCTTCTGGTGCCTCCGGAACTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR TCA 90 bp | GACTGGGCCTATCAGTCCCTCTTCTCTGGTCCTAATAATGACCTAATCCTCTTACGACGATCCTCAGTTTaGTTGTCTGGCCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: DWAYQSLFSGPNNDLILLRRSSV*LSGPGP Trigger: AGGACCAGGGCCAGACAATCAAACTGAGGATCGTCG...TAAGAGGATTAGGTCATTATTAGGACCAGAGAAGAGGGACTGATAGGCCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR TCA 90 bp | TCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCTTTGTCCACTTTGCGTaGACGGGTATATCCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SFCPISLRHSFLFYLLVVFVHFA*TGISQD Trigger: ATCCTGGGATATACCCGTTCACGCAAAGTGGACAAA...GACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR CCA 90 bp | AGTTCCGGAGGCACCAGAAGACAATCCTCAGACATTGTAATCTTCCATTGTCTTGCCTTCAGCACAGCATaGAGGCTCATGTACCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSGGTRRQSSDIVIFHCLAFSTA*RLMYQV Trigger: GACCTGGTACATGAGCCTCCATGCTGTGCTGAAGGC...AAGACAATGGAAGATTACAATGTCTGAGGATTGTCTTCTGGTGCCTCCGGAACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR TCA 90 bp | GATTATATATCCAGAGCATCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTTGTCCACTTTGCGTaGACGGGTATATCCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: DYISRASFCPISLRHSFLFVHFA*TGISQD Trigger: ATCCTGGGATATACCCGTTCACGCAAAGTGGACAAA...GAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGATGCTCTGGATATATAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR TCA 90 bp | TCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCAGTCCCTCTTCTCTGGTTTTGTCCACTTTGCGTaGACGGGTATATCCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SRKMSHPQDWAYQSLFSGFVHFA*TGISQD Trigger: ATCCTGGGATATACCCGTTCACGCAAAGTGGACAAA...ACCAGAGAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR TCA 90 bp | TCTCATCCACAAGACTGGGCCTATCAGTCCCTCTTCTCTGGTCCTAATAATGACTTTGTCCACTTTGCGTaGACGGGTATATCCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SHPQDWAYQSLFSGPNNDFVHFA*TGISQD Trigger: ATCCTGGGATATACCCGTTCACGCAAAGTGGACAAA...GTCATTATTAGGACCAGAGAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR TCA 90 bp | ATAATGCGCATCTGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCATTTGTCCACTTTGCGTaGACGGGTATATCCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: IMRICVSKNVSSTRLGLSFVHFA*TGISQD Trigger: ATCCTGGGATATACCCGTTCACGCAAAGTGGACAAA...TGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACAGATGCGCATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR TCA 90 bp | ACCAGAAGACAATCCTCAGACATTGTAATCTTCCATTGTCTTCAGGTTCCTCACTTTGTCCACTTTGCGTaGACGGGTATATCCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TRRQSSDIVIFHCLQVPHFVHFA*TGISQD Trigger: ATCCTGGGATATACCCGTTCACGCAAAGTGGACAAA...GTGAGGAACCTGAAGACAATGGAAGATTACAATGTCTGAGGATTGTCTTCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| 3UTR CAA 72 bp | TTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTaGTCCATACTTTATATATATGTGTTCATGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FPFATASSSTCW*SILYIYVFMGS Trigger: AGAGCCCATGAACACATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| 3UTR CAA 72 bp | TGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTaGCTGGTTGTCCATACTTTATATATATGTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: CPISLRHSFLFY*LVVHTLYICVH Trigger: ATGAACACATATATATAAAGTATGGACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS CCA 90 bp | ACCAGGAAGGCTAGCCCGACGATCCTCAGTTTGATTGTCTGGCCCTaGTCCTGGCCCAGGCCGGCAGAGCAAGTGACTGTGAAGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: TRKASPTILSLIVWP*SWPRPAEQVTVKGC Trigger: ACAACCCTTCACAGTCACTTGCTCTGCCGGCCTGGGCCAGGACCAGGGCCAGACAATCAAACTGAGGATCGTCGGGCTAGCCTTCCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000207995.2 ENSMUST00000208260.2 |
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| CDS CCA 90 bp | AAGGCTAGCCCGACGATCCTCAGTTTGATTGTCTGGCCCTGGTCCTaGCCCAGGCCGGCAGAGCAAGTGACTGTGAAGGGTTGTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: KASPTILSLIVWPWS*PRPAEQVTVKGCVQ Trigger: CTGAACACAACCCTTCACAGTCACTTGCTCTGCCGGCCTGGGCCAGGACCAGGGCCAGACAATCAAACTGAGGATCGTCGGGCTAGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000207995.2 ENSMUST00000208260.2 |
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| CDS-3UTR CAA 90 bp | CAGAGCATCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTAGTGACTGTGAAGGGTaGTGTTCAGAGCCTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: QSIFLPHFPSPQLPLLLASDCEG*CSEPSA Trigger: TGCTGAAGGCTCTGAACACAACCCTTCACAGTCACT...AGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGATGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS-3UTR CAA 90 bp | TCTTTCTGCCCCATTTCCCTTCGCCACAGCTTCCTCTTCTACTTGCTGGTTGTCAGTGACTGTGAAGGGTaGTGTTCAGAGCCTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SFCPISLRHSFLFYLLVVSDCEG*CSEPSA Trigger: TGCTGAAGGCTCTGAACACAACCCTTCACAGTCACT...GACAACCAGCAAGTAGAAGAGGAAGCTGTGGCGAAGGGAAATGGGGCAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 |
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| CDS TCA 90 bp | CTTGATGTACACATGATAGGGGTCACTACGTTTGTCCACTTTGCGTaGACGGGTATATCCCAGGATGAGACTGCCCACAGTGACGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LDVHMIGVTTFVHFA*TGISQDETAHSDGK Trigger: TTTGCCGTCACTGTGGGCAGTCTCATCCTGGGATATACCCGTTCACGCAAAGTGGACAAACGTAGTGACCCCTATCATGTGTACATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000207995.2 ENSMUST00000208260.2 |
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| CDS-3UTR CAA 90 bp | TGTGTCTCGAAAAATGTCTCATCCACAAGACTGGGCCTATCAGTCCCTCTTCTCAGTGACTGTGAAGGGTaGTGTTCAGAGCCTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CVSKNVSSTRLGLSVPLLSDCEG*CSEPSA Trigger: TGCTGAAGGCTCTGAACACAACCCTTCACAGTCACT...GAGAAGAGGGACTGATAGGCCCAGTCTTGTGGATGAGACATTTTTCGAGACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR CAA 90 bp | GTTGAGTTCCGGAGGCACCAGAAGACAATCCTCAGACATTGTAATCTTCCATTGAGTGACTGTGAAGGGTaGTGTTCAGAGCCTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VEFRRHQKTILRHCNLPLSDCEG*CSEPSA Trigger: TGCTGAAGGCTCTGAACACAACCCTTCACAGTCACT...CAATGGAAGATTACAATGTCTGAGGATTGTCTTCTGGTGCCTCCGGAACTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCACCAGAAGACAATCCTCAGACATTGTAATCTTCCATTGTCTTCAGGTTAGTGACTGTGAAGGGTaGTGTTCAGAGCCTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GGTRRQSSDIVIFHCLQVSDCEG*CSEPSA Trigger: TGCTGAAGGCTCTGAACACAACCCTTCACAGTCACT...AACCTGAAGACAATGGAAGATTACAATGTCTGAGGATTGTCTTCTGGTGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000208260.2 |
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| CDS CCA 72 bp | GCTAGCCCGACGATCCTCAGTTTGATTGTCTGGCCCTaGTCCTGGCCCAGGCCGGCAGAGCAAGTGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: ASPTILSLIVWP*SWPRPAEQVTV Trigger: CACAGTCACTTGCTCTGCCGGCCTGGGCCAGGACCAGGGCCAGACAATCAAACTGAGGATCGTCGGGCTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000207995.2 ENSMUST00000208260.2 |
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| CDS CAA 72 bp | ATTACGACCAGGAAGGCTAGCCCGACGATCCTCAGTTaGATTGTCTGGCCCTGGTCCTGGCCCAGGCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: ITTRKASPTILS*IVWPWSWPRPA Trigger: TGCCGGCCTGGGCCAGGACCAGGGCCAGACAATCAAACTGAGGATCGTCGGGCTAGCCTTCCTGGTCGTAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000207995.2 ENSMUST00000208260.2 |
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| CDS TCA 72 bp | CACATGATAGGGGTCACTACGTTTGTCCACTTTGCGTaGACGGGTATATCCCAGGATGAGACTGCCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: HMIGVTTFVHFA*TGISQDETAHS Trigger: ACTGTGGGCAGTCTCATCCTGGGATATACCCGTTCACGCAAAGTGGACAAACGTAGTGACCCCTATCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000049333.13 ENSMUST00000170954.10 ENSMUST00000178946.9 ENSMUST00000179842.3 ENSMUST00000207358.2 ENSMUST00000207995.2 ENSMUST00000208260.2 |
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