Pregenerated sensors for KCNE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039639Ensembl transcript IDs: ENSMUST00000051705.7, ENSMUST00000166707.3
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATCTGACAAACCAGGCCCGACACCTCGAGGAAGGTGCCACCCCTaGCCCATGTGTTCCCAGTGCCCACACCCATACCTCTTCTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: SSDKPGPTPRGRCHP*PMCSQCPHPYLFWA Trigger: GGCCCAGAAGAGGTATGGGTGTGGGCACTGGGAACACATGGGGCAGGGGTGGCACCTTCCTCGAGGTGTCGGGCCTGGTTTGTCAGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 90 bp | ACAGTGATTCCCCATGCTCCTAGGGAACGTAGCCTGAGGAGCCTTTaGTGCCAACTGCAGCTCTGGTGCCCCCTCTCCGCTCCACTCCCA | + |
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Preference number: 1 (lower is better) Translates to: TVIPHAPRERSLRSL*CQLQLWCPLSAPLP Trigger: TGGGAGTGGAGCGGAGAGGGGGCACCAGAGCTGCAGTTGGCAGCAAAGGCTCCTCAGGCTACGTTCCCTAGGAGCATGGGGAATCACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 90 bp | GGGACAGGGAGCACAGAGAGCACACCCTTCCCAGGACAGGGAGGATaGAGAGCACACCCTTTCCAGGATAGGGAGTATGGAGAGCACAAC | + |
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Preference number: 1 (lower is better) Translates to: GTGSTESTPFPGQGG*RAHPFQDREYGEHN Trigger: GTTGTGCTCTCCATACTCCCTATCCTGGAAAGGGTGTGCTCTCCATCCTCCCTGTCCTGGGAAGGGTGTGCTCTCTGTGCTCCCTGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 90 bp | CCCATGTGTTCCCAGTGCCCACACCCATACCTCTTCTGGGCCCTTTaGGGTGGGCGGGTAGCCACTTTCCCTCTGATGATAACTGCACAC | + |
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Preference number: 1 (lower is better) Translates to: PMCSQCPHPYLFWAL*GGRVATFPLMITAH Trigger: GTGTGCAGTTATCATCAGAGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGGGTGTGGGCACTGGGAACACATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 90 bp | GTGTTCCCAGTGCCCACACCCATACCTCTTCTGGGCCCTTTGGGGTaGGCGGGTAGCCACTTTCCCTCTGATGATAACTGCACACCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VFPVPTPIPLLGPLG*AGSHFPSDDNCTPC Trigger: ACAAGGTGTGCAGTTATCATCAGAGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGGGTGTGGGCACTGGGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 90 bp | AAGTCTCCCAAGCAACAGGCGGGCATTGTCCCATGTTCTCAAAGCTaGAGTTGGAAACAAGGGCTTGGGAGGGCCTCATGTCCTTGGACG | + |
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Preference number: 1 (lower is better) Translates to: KSPKQQAGIVPCSQS*SWKQGLGRASCPWT Trigger: CGTCCAAGGACATGAGGCCCTCCCAAGCCCTTGTTTCCAACTCCAGCTTTGAGAACATGGGACAATGCCCGCCTGTTGCTTGGGAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 90 bp | GCCTCCTCAGTACCACTGAGAGTGAGTCACTGCCTCCATCAAAGCTaGCTCAAGTCTGTCAGTGCTGTTAAGTGGGACAGGGAGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: ASSVPLRVSHCLHQS*LKSVSAVKWDREHR Trigger: TCTGTGCTCCCTGTCCCACTTAACAGCACTGACAGACTTGAGGCAGCTTTGATGGAGGCAGTGACTCACTCTCAGTGGTACTGAGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 90 bp | CCACCCACCATGGGTTCTGGGGATCAAACTGCAGTCACCTCTCTGTaGCAGGCCATCTTGCTAAGCCCGGTGTTCAGCTTTCCAAAACTT | + |
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Preference number: 1 (lower is better) Translates to: PPTMGSGDQTAVTSL*QAILLSPVFSFPKL Trigger: AAGTTTTGGAAAGCTGAACACCGGGCTTAGCAAGATGGCCTGGCACAGAGAGGTGACTGCAGTTTGATCCCCAGAACCCATGGTGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR TCA 90 bp | CACACTCTTCCCAGGATAGGGAGGACGGAGAGTACAACCTTCCCATaGCAGAGAGGACAGAGAGCACAATCTTTCCAGGACAGGGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: HTLPRIGRTESTTFP*QRGQRAQSFQDRED Trigger: ATCCTCCCTGTCCTGGAAAGATTGTGCTCTCTGTCCTCTCTGTCATGGGAAGGTTGTACTCTCCGTCCTCCCTATCCTGGGAAGAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 90 bp | GAAGATGAGGATCCTGCCTCCTCAGTACCACTGAGAGTGAGTCACTaGCTCCATCAAAGCTGCCTCAAGTCTGTCAGTGCTGTTAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: EDEDPASSVPLRVSH*LHQSCLKSVSAVKW Trigger: CCACTTAACAGCACTGACAGACTTGAGGCAGCTTTGATGGAGGCAGTGACTCACTCTCAGTGGTACTGAGGAGGCAGGATCCTCATCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR TCA 90 bp | AGGACAGGGAGGATGGAGAGCACAACCTTCCCAGGACAGGGAGGATaGAGAGCACACACTTCCCATTTCAAAACCTGCTTACAAACTGGA | + |
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Preference number: 1 (lower is better) Translates to: RTGRMESTTFPGQGG*RAHTSHFKTCLQTG Trigger: TCCAGTTTGTAAGCAGGTTTTGAAATGGGAAGTGTGTGCTCTTCATCCTCCCTGTCCTGGGAAGGTTGTGCTCTCCATCCTCCCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR TCA 90 bp | GCGTGTACACACTGTATATCATGTGGAGAACGGAGGACAATTCTCTaGAGTCTGTCTTCTCCTTCCACCCACCATGGGTTCTGGGGATCA | + |
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Preference number: 1 (lower is better) Translates to: ACTHCISCGERRTIL*SLSSPSTHHGFWGS Trigger: TGATCCCCAGAACCCATGGTGGGTGGAAGGAGAAGACAGACTTCAGAGAATTGTCCTCCGTTCTCCACATGATATACAGTGTGTACACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 90 bp | GAGATTTGGGGAAACTCAGCTTGTGTTCTCAGAAGCCATGTTGTCTaGGACCCTGCTAGATTTACAAAGACAAGGACAGGCGCTGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: EIWGNSACVLRSHVV*DPARFTKTRTGAAE Trigger: TTCTGCAGCGCCTGTCCTTGTCTTTGTAAATCTAGCAGGGTCCCAGACAACATGGCTTCTGAGAACACAAGCTGAGTTTCCCCAAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 90 bp | TGCCCATGTCTCCCATCAGAACTTAGTCACGTGACACAGCTAATGTaGAGAGATTTGGGGAAACTCAGCTTGTGTTCTCAGAAGCCATGT | + |
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Preference number: 1 (lower is better) Translates to: CPCLPSELSHVTQLM*RDLGKLSLCSQKPC Trigger: ACATGGCTTCTGAGAACACAAGCTGAGTTTCCCCAAATCTCTCCACATTAGCTGTGTCACGTGACTAAGTTCTGATGGGAGACATGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGAGTTGGAAACAAGGGCTTGGGAGGGCCTCATGTCCTTGGACGGTCACCACCCATACCTCTTCTaGGCCCTTTGGGGTGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: KLELETRAWEGLMSLDGHHPYLF*ALWGGR Trigger: CCGCCCACCCCAAAGGGCCCAGAAGAGGTATGGGTG...GTGACCGTCCAAGGACATGAGGCCCTCCCAAGCCCTTGTTTCCAACTCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CAA 90 bp | CCCCATGTGTTCCCAGTGCCCACACCCATACCTCTTCTGGGCCCTTaGGGGTGGGCGGGTAGCCACTTTCCCTCTGATGATAACTGCACA | + |
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Preference number: 2 (lower is better) Translates to: PHVFPVPTPIPLLGP*GWAGSHFPSDDNCT Trigger: TGTGCAGTTATCATCAGAGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGGGTGTGGGCACTGGGAACACATGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCACCTCTCTGTGCCAGGCCATCTTGCTAAGCCCGGTGTTCAGCTTTCCAACACCTCGAGGAAGGTaGCACCCCTGCCCCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: AVTSLCQAILLSPVFSFPTPRGR*HPCPMC Trigger: ACACATGGGGCAGGGGTGGCACCTTCCTCGAGGTGT...TGGAAAGCTGAACACCGGGCTTAGCAAGATGGCCTGGCACAGAGAGGTGACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR GCA 90 bp | AGCCGGAGAAGGCTGATCCACAGGACAGTGATTCCCCATGCTCCTAGGGAACGTGCCTTTGCTGCCAACTaGAGCTCTGGTGCCCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SRRRLIHRTVIPHAPRERAFAAN*SSGAPS Trigger: AGAGGGGGCACCAGAGCTGCAGTTGGCAGCAAAGGC...ACGTTCCCTAGGAGCATGGGGAATCACTGTCCTGTGGATCAGCCTTCTCCGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCGGAGAAGGCTGATCCACAGGACAGTGATTCCCCATGCTCCTAGGGAACGTGGCAGTACAGGAAGATaGGGATCCTGCCTCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SRRRLIHRTVIPHAPRERGSTGR*GSCLLS Trigger: ACTGAGGAGGCAGGATCCTCATCTTCCTGTACTGCC...ACGTTCCCTAGGAGCATGGGGAATCACTGTCCTGTGGATCAGCCTTCTCCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CAA 90 bp | AGGGCCTCATGTCCTTGGACGGTCACAGGAACAATTGTTCCTTTTTaGAGTCCAGTGGCCATCTGTCCTCCACTCTCCTTGGCTTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: RASCPWTVTGTIVPF*SPVAICPPLSLAFV Trigger: GACAAAAGCCAAGGAGAGTGGAGGACAGATGGCCACTGGACTCAAAAAAGGAACAATTGTTCCTGTGACCGTCCAAGGACATGAGGCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCCAGGCCATCTTGCTAAGCCCGGTGTTCAGCTTTCCAAAACTTGTGTCTAGTACAACCTTCCCATaGCAGAGAGGACAGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LCQAILLSPVFSFPKLVSSTTFP*QRGQRA Trigger: TGCTCTCTGTCCTCTCTGTCATGGGAAGGTTGTACT...AGACACAAGTTTTGGAAAGCTGAACACCGGGCTTAGCAAGATGGCCTGGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CAA 90 bp | GTGGAGAGATTTGGGGAAACTCAGCTTGTGTTCTCAGAAGCCATGTaGTCTGGGACCCTGCTAGATTTACAAAGACAAGGACAGGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: VERFGETQLVFSEAM*SGTLLDLQRQGQAL Trigger: CAGCGCCTGTCCTTGTCTTTGTAAATCTAGCAGGGTCCCAGACAACATGGCTTCTGAGAACACAAGCTGAGTTTCCCCAAATCTCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CAA 90 bp | TTTCCTCCTCTGTCTCAGCCCTACAAGAAGCAATTTCTGTCCAGGTaGAACTGTAAGGGGCATCAGGAGGGAGTATACATGAGGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: FPPLSQPYKKQFLSR*NCKGHQEGVYMRVG Trigger: TCCCACCCTCATGTATACTCCCTCCTGATGCCCCTTACAGTTCAACCTGGACAGAAATTGCTTCTTGTAGGGCTGAGACAGAGGAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGCACACTCTTCCCAGGATAGGGAGGACAGGGAACATACTCTTCCCAGGATAAACCTGCTTACAAACTaGACTCATCATGCCCATGTC | + |
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Preference number: 2 (lower is better) Translates to: RAHSSQDREDREHTLPRINLLTN*THHAHV Trigger: GACATGGGCATGATGAGTCCAGTTTGTAAGCAGGTT...TATCCTGGGAAGAGTATGTTCCCTGTCCTCCCTATCCTGGGAAGAGTGTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGCGTGTACACACTGTATATCATGTGGAGAACGGAGGACAATTCTCTGAACTGAGAGTGAGTCACTaGCTCCATCAAAGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CVRVHTVYHVENGGQFSELRVSH*LHQSCL Trigger: GAGGCAGCTTTGATGGAGGCAGTGACTCACTCTCAG...TTCAGAGAATTGTCCTCCGTTCTCCACATGATATACAGTGTGTACACGCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 72 bp | AAACCAGGCCCGACACCTCGAGGAAGGTGCCACCCCTaGCCCATGTGTTCCCAGTGCCCACACCCATACCTC | + |
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Preference number: 3 (lower is better) Translates to: KPGPTPRGRCHP*PMCSQCPHPYL Trigger: GAGGTATGGGTGTGGGCACTGGGAACACATGGGGCAGGGGTGGCACCTTCCTCGAGGTGTCGGGCCTGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 72 bp | CCCCATGCTCCTAGGGAACGTAGCCTGAGGAGCCTTTaGTGCCAACTGCAGCTCTGGTGCCCCCTCTCCGCT | + |
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Preference number: 3 (lower is better) Translates to: PHAPRERSLRSL*CQLQLWCPLSA Trigger: AGCGGAGAGGGGGCACCAGAGCTGCAGTTGGCAGCAAAGGCTCCTCAGGCTACGTTCCCTAGGAGCATGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 72 bp | CATGCTCCTAGGGAACGTAGCCTGAGGAGCCTTTGCTaGCAACTGCAGCTCTGGTGCCCCCTCTCCGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: HAPRERSLRSLC*QLQLWCPLSAP Trigger: TGGAGCGGAGAGGGGGCACCAGAGCTGCAGTTGGCAGCAAAGGCTCCTCAGGCTACGTTCCCTAGGAGCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | CCCATGTGTTCCCAGTGCCCACACCCATACCTCTTCTaGGCCCTTTGGGGTGGGCGGGTAGCCACTTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: PMCSQCPHPYLF*ALWGGRVATFP Trigger: AGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGGGTGTGGGCACTGGGAACACATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | CGTAGCCTGAGGAGCCTTTGCTGCCAACTGCAGCTCTaGTGCCCCCTCTCCGCTCCACTCCCATGGTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RSLRSLCCQLQL*CPLSAPLPWFL Trigger: AAGGAACCATGGGAGTGGAGCGGAGAGGGGGCACCAGAGCTGCAGTTGGCAGCAAAGGCTCCTCAGGCTACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | GTGCCCACACCCATACCTCTTCTGGGCCCTTTGGGGTaGGCGGGTAGCCACTTTCCCTCTGATGATAACTGC | + |
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Preference number: 3 (lower is better) Translates to: VPTPIPLLGPLG*AGSHFPSDDNC Trigger: GCAGTTATCATCAGAGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGGGTGTGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | TCCCAGTGCCCACACCCATACCTCTTCTGGGCCCTTTaGGGTGGGCGGGTAGCCACTTTCCCTCTGATGATA | + |
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Preference number: 3 (lower is better) Translates to: SQCPHPYLFWAL*GGRVATFPLMI Trigger: TATCATCAGAGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGGGTGTGGGCACTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR CAA 90 bp | CCCACCATGGGTTCTGGGGATCAAACTGCAGTCACCTCTCTGTGCCAGGCCATCGTTGGAAACAAGGGCTaGGGAGGGCCTCATGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: PTMGSGDQTAVTSLCQAIVGNKG*GGPHVL Trigger: AAGGACATGAGGCCCTCCCAAGCCCTTGTTTCCAAC...GATGGCCTGGCACAGAGAGGTGACTGCAGTTTGATCCCCAGAACCCATGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | CAGGCGGGCATTGTCCCATGTTCTCAAAGCTGGAGTTaGAAACAAGGGCTTGGGAGGGCCTCATGTCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: QAGIVPCSQSWS*KQGLGRASCPW Trigger: CCAAGGACATGAGGCCCTCCCAAGCCCTTGTTTCCAACTCCAGCTTTGAGAACATGGGACAATGCCCGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR CAA 90 bp | CCCACCATGGGTTCTGGGGATCAAACTGCAGTCACCTCTCTGTGCCAGGCCATCTGTCCTCCACTCTCCTaGGCTTTTGTCCTTGTCACT | + |
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Preference number: 3 (lower is better) Translates to: PTMGSGDQTAVTSLCQAICPPLS*AFVLVT Trigger: AGTGACAAGGACAAAAGCCAAGGAGAGTGGAGGACA...GATGGCCTGGCACAGAGAGGTGACTGCAGTTTGATCCCCAGAACCCATGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 72 bp | CCTTGTCACTCCAGTCTCTGTCCTGGCATCTCACGGTaGTCTCCGTGTGTGTCCCTCTTAGAAAGTCACGAG | + |
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Preference number: 3 (lower is better) Translates to: PCHSSLCPGISR*SPCVSLLESHE Trigger: CTCGTGACTTTCTAAGAGGGACACACACGGAGAGCACCGTGAGATGCCAGGACAGAGACTGGAGTGACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | CATCAAAGCTGCCTCAAGTCTGTCAGTGCTGTTAAGTaGGACAGGGAGCACAGAGAGCACACCCTTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HQSCLKSVSAVK*DREHREHTLPR Trigger: CCTGGGAAGGGTGTGCTCTCTGTGCTCCCTGTCCCACTTAACAGCACTGACAGACTTGAGGCAGCTTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | CCCATGTTCTCAAAGCTGGAGTTGGAAACAAGGGCTTaGGAGGGCCTCATGTCCTTGGACGGTCACAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: PMFSKLELETRA*EGLMSLDGHRN Trigger: GTTCCTGTGACCGTCCAAGGACATGAGGCCCTCCCAAGCCCTTGTTTCCAACTCCAGCTTTGAGAACATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 72 bp | GATCCTGCCTCCTCAGTACCACTGAGAGTGAGTCACTaGCTCCATCAAAGCTGCCTCAAGTCTGTCAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: DPASSVPLRVSH*LHQSCLKSVSA Trigger: AGCACTGACAGACTTGAGGCAGCTTTGATGGAGGCAGTGACTCACTCTCAGTGGTACTGAGGAGGCAGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 72 bp | ATGGGTTCTGGGGATCAAACTGCAGTCACCTCTCTGTaGCAGGCCATCTTGCTAAGCCCGGTGTTCAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: MGSGDQTAVTSL*QAILLSPVFSF Trigger: AAAGCTGAACACCGGGCTTAGCAAGATGGCCTGGCACAGAGAGGTGACTGCAGTTTGATCCCCAGAACCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | AAGCAACAGGCGGGCATTGTCCCATGTTCTCAAAGCTaGAGTTGGAAACAAGGGCTTGGGAGGGCCTCATGT | + |
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Preference number: 3 (lower is better) Translates to: KQQAGIVPCSQS*SWKQGLGRASC Trigger: ACATGAGGCCCTCCCAAGCCCTTGTTTCCAACTCCAGCTTTGAGAACATGGGACAATGCCCGCCTGTTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR TCA 72 bp | CCCAGGATAGGGAGGACAGAGAGTACAACCTTCCCATaGCAGAGAGGACAGAGAGCACAATCTTTCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: PRIGRTESTTFP*QRGQRAQSFQD Trigger: GTCCTGGAAAGATTGTGCTCTCTGTCCTCTCTGTCATGGGAAGGTTGTACTCTCTGTCCTCCCTATCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR TCA 72 bp | AGCCCGGTGTTCAGCTTTCCAAAACTTGTGTCTCAGTaGGTGTTCCATACTCTCCAGGAGTGCCTGGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: SPVFSFPKLVSQ*VFHTLQECLAG Trigger: ACCTGCCAGGCACTCCTGGAGAGTATGGAACACTCACTGAGACACAAGTTTTGGAAAGCTGAACACCGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR GCA 72 bp | GTACCACTGAGAGTGAGTCACTGCCTCCATCAAAGCTaGCTCAAGTCTGTCAGTGCTGTTAAGTGGGACAGG | + |
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Preference number: 3 (lower is better) Translates to: VPLRVSHCLHQS*LKSVSAVKWDR Trigger: CCTGTCCCACTTAACAGCACTGACAGACTTGAGGCAGCTTTGATGGAGGCAGTGACTCACTCTCAGTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | AAAGGAATGCAGAAAAGGTGTGTAATAACGGAGGAGTaGGAGTCAGGAGGACAGAGGGCAGAATCCCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: KGMQKRCVITEE*ESGGQRAESRL Trigger: CAGCCGGGATTCTGCCCTCTGTCCTCCTGACTCCCACTCCTCCGTTATTACACACCTTTTCTGCATTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR TCA 72 bp | AGGATGGAGAGCACAACCTTCCCAGGACAGGGAGGATaGAGAGCACACACTTCCCATTTCAAAACCTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: RMESTTFPGQGG*RAHTSHFKTCL Trigger: TAAGCAGGTTTTGAAATGGGAAGTGTGTGCTCTTCATCCTCCCTGTCCTGGGAAGGTTGTGCTCTCCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR-3UTR CAA 90 bp | GCAGAGACCAAAATAAGCAGTGGCTGCAGGGACTGTGGTGATAGGCTCTTTCTTCTAATGTGGAGAGATTaGGGGAAACTCAGCTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: AETKISSGCRDCGDRLFLLMWRD*GKLSLC Trigger: ACACAAGCTGAGTTTCCCCAAATCTCTCCACATTAG...AAGAAAGAGCCTATCACCACAGTCCCTGCAGCCACTGCTTATTTTGGTCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | CTCCCATCAGAACTTAGTCACGTGACACAGCTAATGTaGAGAGATTTGGGGAAACTCAGCTTGTGTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LPSELSHVTQLM*RDLGKLSLCSQ Trigger: CTGAGAACACAAGCTGAGTTTCCCCAAATCTCTCCACATTAGCTGTGTCACGTGACTAAGTTCTGATGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CCA 72 bp | AGCACACACTTCCCATTTCAAAACCTGCTTACAAACTaGACTCATCATGCCCATGTCTCCCATCAGAACTTA | + |
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Preference number: 3 (lower is better) Translates to: STHFPFQNLLTN*THHAHVSHQNL Trigger: TAAGTTCTGATGGGAGACATGGGCATGATGAGTCCAGTTTGTAAGCAGGTTTTGAAATGGGAAGTGTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR GCA 90 bp | CCATACCTCTTCTGGGCCCTTTGGGGTGGGCGGGTAGCCACTTTCCCTCTGATGCCTGGAAGACGGCCTTaGCTTTCTCCTGCCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PYLFWALWGGRVATFPLMPGRRP*LSPARH Trigger: ATGCCTGGCAGGAGAAAGGCAAGGCCGTCTTCCAGG...CATCAGAGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR CCA 90 bp | CAGGACAGGGAGGACAGAGAGCACACTCTTCCCAGGATAGGGAGGACGGAGAGTTCCAGGACACGGGCCTaGAAGACGGCCTTGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QDREDREHTLPRIGRTESSRTRA*KTALPF Trigger: GAAAGGCAAGGCCGTCTTCCAGGCCCGTGTCCTGGA...ACTCTCCGTCCTCCCTATCCTGGGAAGAGTGTGCTCTCTGTCCTCCCTGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR CCA 90 bp | ATGGAGAGCACAACCCTCCCAGGACAGGGAGGACAGAGAGCACAACCTTCCCAGGTTCAGGAAGGTGTGTaGCAGGCTGCTCTACGGCCG | + |
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Preference number: 4 (lower is better) Translates to: MESTTLPGQGGQRAQPSQVQEGV*QAALRP Trigger: CGGCCGTAGAGCAGCCTGCCACACACCTTCCTGAAC...CTGGGAAGGTTGTGCTCTCTGTCCTCCCTGTCCTGGGAGGGTTGTGCTCTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CAA 72 bp | TTCCCAGTGCCCACACCCATACCTCTTCTGGGCCCTTaGGGGTGGGCGGGTAGCCACTTTCCCTCTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: FPVPTPIPLLGP*GWAGSHFPSDD Trigger: ATCATCAGAGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGGGTGTGGGCACTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR GCA 90 bp | CCATACCTCTTCTGGGCCCTTTGGGGTGGGCGGGTAGCCACTTTCCCTCTGATGGCCTTGCCTTTCTCCTaGCAGGCATCTGACTCGATG | + |
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Preference number: 4 (lower is better) Translates to: PYLFWALWGGRVATFPLMALPFS*QASDSM Trigger: CATCGAGTCAGATGCCTGGCAGGAGAAAGGCAAGGC...CATCAGAGGGAAAGTGGCTACCCGCCCACCCCAAAGGGCCCAGAAGAGGTATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR TCA 90 bp | TCCCAGGATAGGGAGGATGGAGAGCACAACCCTCCCAGGACAGGGAGGACAGAGCTCCTGCCAGGCATCTaGCTCGATGTACACGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SQDREDGEHNPPRTGRTELLPGI*LDVHVE Trigger: TTCAACGTGTACATCGAGTCAGATGCCTGGCAGGAG...CTCTGTCCTCCCTGTCCTGGGAGGGTTGTGCTCTCCATCCTCCCTATCCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR GCA 90 bp | GAGGATCCTGCCTCCTCAGTACCACTGAGAGTGAGTCACTGCCTCCATCAAAGCAGGTGTGTGGCAGGCTaGTCTACGGCCGCCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: EDPASSVPLRVSHCLHQSRCVAG*STAAWF Trigger: AAACCAGGCGGCCGTAGAGCAGCCTGCCACACACCT...GCTTTGATGGAGGCAGTGACTCACTCTCAGTGGTACTGAGGAGGCAGGATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR CCA 90 bp | CAGTGGTGCCCCTACAATAAAGACTATGGCAGGCATGCGACTAGAAAGATCCGCTCCAGGACACGGGCCTaGAAGACGGCCTTGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QWCPYNKDYGRHATRKIRSRTRA*KTALPF Trigger: GAAAGGCAAGGCCGTCTTCCAGGCCCGTGTCCTGGA...GCGGATCTTTCTAGTCGCATGCCTGCCATAGTCTTTATTGTAGGGGCACCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| 3UTR CAA 72 bp | GTCCAGTGGCCATCTGTCCTCCACTCTCCTTGGCTTTaGTCCTTGTCACTCCAGTCTCTGTCCTGGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: VQWPSVLHSPWL*SLSLQSLSWHL Trigger: GAGATGCCAGGACAGAGACTGGAGTGACAAGGACAAAAGCCAAGGAGAGTGGAGGACAGATGGCCACTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CAA 72 bp | ACAGGCGGGCATTGTCCCATGTTCTCAAAGCTGGAGTaGGAAACAAGGGCTTGGGAGGGCCTCATGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TGGHCPMFSKLE*ETRAWEGLMSL Trigger: CAAGGACATGAGGCCCTCCCAAGCCCTTGTTTCCAACTCCAGCTTTGAGAACATGGGACAATGCCCGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR GCA 90 bp | TGGTGCCCCTACAATAAAGACTATGGCAGGCATGCGACTAGAAAGATCCGCTTGAGGTGTGTGGCAGGCTaGTCTACGGCCGCCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: WCPYNKDYGRHATRKIRLRCVAG*STAAWF Trigger: AAACCAGGCGGCCGTAGAGCAGCCTGCCACACACCT...CAAGCGGATCTTTCTAGTCGCATGCCTGCCATAGTCTTTATTGTAGGGGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| 3UTR CAA 72 bp | TCCCATGTTCTCAAAGCTGGAGTTGGAAACAAGGGCTaGGGAGGGCCTCATGTCCTTGGACGGTCACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SHVLKAGVGNKG*GGPHVLGRSQE Trigger: TTCCTGTGACCGTCCAAGGACATGAGGCCCTCCCAAGCCCTTGTTTCCAACTCCAGCTTTGAGAACATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR CCA 90 bp | CCCTACAATAAAGACTATGGCAGGCATGCGACTAGAAAGATCCGCTTGTCACCTGTTCAGGAAGGTGTGTaGCAGGCTGCTCTACGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PYNKDYGRHATRKIRLSPVQEGV*QAALRP Trigger: CGGCCGTAGAGCAGCCTGCCACACACCTTCCTGAAC...AGGTGACAAGCGGATCTTTCTAGTCGCATGCCTGCCATAGTCTTTATTGTAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| CDS-3UTR GCA 90 bp | TGGTGCCCCTACAATAAAGACTATGGCAGGCATGCGACTAGAAAGATCCGCTTGTGTTCAGCTGTCTCCTaGCACAGCCTGGCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: WCPYNKDYGRHATRKIRLCSAVS*HSLARK Trigger: CTTTCTGGCCAGGCTGTGGCAGGAGACAGCTGAACA...CAAGCGGATCTTTCTAGTCGCATGCCTGCCATAGTCTTTATTGTAGGGGCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| CDS-3UTR GCA 90 bp | CCCTACAATAAAGACTATGGCAGGCATGCGACTAGAAAGATCCGCTTGTCACCTCCTGGAAGACGGCCTTaGCTTTCTCCTGCCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PYNKDYGRHATRKIRLSPPGRRP*LSPARH Trigger: ATGCCTGGCAGGAGAAAGGCAAGGCCGTCTTCCAGG...AGGTGACAAGCGGATCTTTCTAGTCGCATGCCTGCCATAGTCTTTATTGTAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| 3UTR CAA 72 bp | GATCAAACTGCAGTCACCTCTCTGTGCCAGGCCATCTaGCTAAGCCCGGTGTTCAGCTTTCCAAAACTTGTG | + |
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Preference number: 4 (lower is better) Translates to: DQTAVTSLCQAI*LSPVFSFPKLV Trigger: CACAAGTTTTGGAAAGCTGAACACCGGGCTTAGCAAGATGGCCTGGCACAGAGAGGTGACTGCAGTTTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CAA 72 bp | ACACAGCTAATGTGGAGAGATTTGGGGAAACTCAGCTaGTGTTCTCAGAAGCCATGTTGTCTGGGACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TQLMWRDLGKLS*CSQKPCCLGPC Trigger: GCAGGGTCCCAGACAACATGGCTTCTGAGAACACAAGCTGAGTTTCCCCAAATCTCTCCACATTAGCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| 3UTR CAA 72 bp | TGTCCTTGGACGGTCACAGGAACAATTGTTCCTTTTTaGAGTCCAGTGGCCATCTGTCCTCCACTCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CPWTVTGTIVPF*SPVAICPPLSL Trigger: CAAGGAGAGTGGAGGACAGATGGCCACTGGACTCAAAAAAGGAACAATTGTTCCTGTGACCGTCCAAGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR TCA 90 bp | TACAATAAAGACTATGGCAGGCATGCGACTAGAAAGATCCGCTTGTCACCTGTACTCCTGCCAGGCATCTaGCTCGATGTACACGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: YNKDYGRHATRKIRLSPVLLPGI*LDVHVE Trigger: TTCAACGTGTACATCGAGTCAGATGCCTGGCAGGAG...TACAGGTGACAAGCGGATCTTTCTAGTCGCATGCCTGCCATAGTCTTTATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| 3UTR CAA 72 bp | TTTGGGGAAACTCAGCTTGTGTTCTCAGAAGCCATGTaGTCTGGGACCCTGCTAGATTTACAAAGACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: FGETQLVFSEAM*SGTLLDLQRQG Trigger: TCCTTGTCTTTGTAAATCTAGCAGGGTCCCAGACAACATGGCTTCTGAGAACACAAGCTGAGTTTCCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS-3UTR GCA 90 bp | TGCAATTTCAGAAAACTGGTGTCATTAATTCACCCCTCACAGTCTTTCACAAAAGCCTTGCCTTTCTCCTaGCAGGCATCTGACTCGATG | + |
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Preference number: 4 (lower is better) Translates to: CNFRKLVSLIHPSQSFTKALPFS*QASDSM Trigger: CATCGAGTCAGATGCCTGGCAGGAGAAAGGCAAGGC...TTTTGTGAAAGACTGTGAGGGGTGAATTAATGACACCAGTTTTCTGAAATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| 3UTR CAA 72 bp | TACAAAGACAAGGACAGGCGCTGCAGAATAAATCGATaGTCTACTATAGAAAGAATGCAATTTCAGAAAACT | + |
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Preference number: 4 (lower is better) Translates to: YKDKDRRCRINR*STIERMQFQKT Trigger: AGTTTTCTGAAATTGCATTCTTTCTATAGTAGACAATCGATTTATTCTGCAGCGCCTGTCCTTGTCTTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051705.7 |
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| CDS GCA 90 bp | TTACGAGCCAGGCCGGACACGTTGCCGCCCTGTTCAGCTGTCTCCTaGCACAGCCTGGCCAGAAAGGGCAGAACAGTCGTGGAATTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LRARPDTLPPCSAVS*HSLARKGRTVVELG Trigger: GCCCAATTCCACGACTGTTCTGCCCTTTCTGGCCAGGCTGTGGCAGGAGACAGCTGAACAGGGCGGCAACGTGTCCGGCCTGGCTCGTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| CDS GCA 72 bp | AGGCCGGACACGTTGCCGCCCTGTTCAGCTGTCTCCTaGCACAGCCTGGCCAGAAAGGGCAGAACAGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: RPDTLPPCSAVS*HSLARKGRTVV Trigger: CACGACTGTTCTGCCCTTTCTGGCCAGGCTGTGGCAGGAGACAGCTGAACAGGGCGGCAACGTGTCCGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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| CDS TCA 72 bp | CTGGAAGACGGCCTTGCCTTTCTCCTGCCAGGCATCTaGCTCGATGTACACGTTGAAAGGGTCGTGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LEDGLAFLLPGI*LDVHVERVVGV Trigger: CACTCCCACGACCCTTTCAACGTGTACATCGAGTCAGATGCCTGGCAGGAGAAAGGCAAGGCCGTCTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051705.7 ENSMUST00000166707.3 |
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