Pregenerated sensors for KCND2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060882Ensembl transcript IDs: ENSMUST00000081542.6
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTCACAAAGTCAAAGGGCCACAGAGTCACCCTCTGTGGACAGGTTaGACGCTGTCTAGAAATGCCTTTTGGTGGTTTGATTCACATCTT | + |
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Preference number: 1 (lower is better) Translates to: IHKVKGPQSHPLWTG*TLSRNAFWWFDSHL Trigger: AAGATGTGAATCAAACCACCAAAAGGCATTTCTAGACAGCGTTCAACCTGTCCACAGAGGGTGACTCTGTGGCCCTTTGACTTTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR CCA 90 bp | GCTCAGTGGAAAGACACTAAAGAGATCCAGGGACAGATAATGCACTaGGTCACAGGAATACAGTGGACCAAAGAATACTACCAAAATACA | + |
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Preference number: 1 (lower is better) Translates to: AQWKDTKEIQGQIMH*VTGIQWTKEYYQNT Trigger: TGTATTTTGGTAGTATTCTTTGGTCCACTGTATTCCTGTGACCCAGTGCATTATCTGTCCCTGGATCTCTTTAGTGTCTTTCCACTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR TCA 90 bp | ATTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTaGAAAGGTAGCAAGACTTTTCACTTAAATGTACACAGTGGTCGA | + |
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Preference number: 1 (lower is better) Translates to: IFTLSRADTSADIQG*KGSKTFHLNVHSGR Trigger: TCGACCACTGTGTACATTTAAGTGAAAAGTCTTGCTACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR CCA 90 bp | CATAAGGAAACTGAGATCACTGCTCCAAAGAATTCTAGCATGCATTaGGATGGTTTCCTTCAGTCCACACAAATGGATCGTATGAATTTT | + |
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Preference number: 1 (lower is better) Translates to: HKETEITAPKNSSMH*DGFLQSTQMDRMNF Trigger: AAAATTCATACGATCCATTTGTGTGGACTGAAGGAAACCATCCCAATGCATGCTAGAATTCTTTGGAGCAGTGATCTCAGTTTCCTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR TCA 90 bp | ACAGAAATTTCCCCTTTCTACAGGTATAGTTTGTCATGCCTATTCTaGAGACAACATAAGGAAACTGAGATCACTGCTCCAAAGAATTCT | + |
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Preference number: 1 (lower is better) Translates to: TEISPFYRYSLSCLF*RQHKETEITAPKNS Trigger: AGAATTCTTTGGAGCAGTGATCTCAGTTTCCTTATGTTGTCTTCAGAATAGGCATGACAAACTATACCTGTAGAAAGGGGAAATTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR GCA 90 bp | AACTTTGTGCCTTGTGATACACTAGAATCTTTTGAGATACATTGTTaGTTTCTTGGATGGCATTTAAAGCATGCTCTCATCAAATATTGC | + |
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Preference number: 1 (lower is better) Translates to: NFVPCDTLESFEIHC*FLGWHLKHALIKYC Trigger: GCAATATTTGATGAGAGCATGCTTTAAATGCCATCCAAGAAAGCAACAATGTATCTCAAAAGATTCTAGTGTATCACAAGGCACAAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGTCATTAGTGGGTAAGCTCAGTGGAAAGACACTAAAGAGATCCAGGGACTGCCTTTTGGTGGTTTaGTTCACATCTTCAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: VLSLVGKLSGKTLKRSRDCLLVV*FTSSTL Trigger: CAGAGTTGAAGATGTGAATCAAACCACCAAAAGGCA...GTCCCTGGATCTCTTTAGTGTCTTTCCACTGAGCTTACCCACTAATGACAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTAAAACCCGGCCACACCAGGAGTTTTTCTATGAATGTGGCTCTCACTGTTTGTCATGCCTATTCTaGAGACAACATAAGGAAACT | + |
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Preference number: 2 (lower is better) Translates to: SAKTRPHQEFFYECGSHCLSCLF*RQHKET Trigger: AGTTTCCTTATGTTGTCTTCAGAATAGGCATGACAA...ACAGTGAGAGCCACATTCATAGAAAAACTCCTGGTGTGGCCGGGTTTTAGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTAAAACCCGGCCACACCAGGAGTTTTTCTATGAATGTGGCTCTCACTGTAGAAATGCCTTTTGGTaGTTTGATTCACATCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SAKTRPHQEFFYECGSHCRNAFW*FDSHLQ Trigger: TTGAAGATGTGAATCAAACCACCAAAAGGCATTTCT...ACAGTGAGAGCCACATTCATAGAAAAACTCCTGGTGTGGCCGGGTTTTAGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR TCA 90 bp | CTTACAGTACAGTTGCACTTAACACCGTCATCAAAAGTCATTCACCACCAACACTCTATAAATGGGAAGTaGCCATTTCTGGCTTTACCT | + |
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Preference number: 2 (lower is better) Translates to: LTVQLHLTPSSKVIHHQHSINGK*PFLALP Trigger: AGGTAAAGCCAGAAATGGTCACTTCCCATTTATAGA...GTGTTGGTGGTGAATGACTTTTGATGACGGTGTTAAGTGCAACTGTACTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR GCA 90 bp | CTTACAGTACAGTTGCACTTAACACCGTCATCAAAAGTCATTCACCACCAACACACTTCAGTTTTCCTCTaGATTCCAGTTGTCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LTVQLHLTPSSKVIHHQHTSVFL*IPVVLK Trigger: TTTGAGGACAACTGGAATGCAGAGGAAAACTGAAGT...GTGTTGGTGGTGAATGACTTTTGATGACGGTGTTAAGTGCAACTGTACTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR CCA 90 bp | ATATGGGTGTTTGCAGGGTCTGGGTTTTCTACAAATAGTGAAACACTGGAGATAAATTCTAGCATGCATTaGGATGGTTTCCTTCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: IWVFAGSGFSTNSETLEINSSMH*DGFLQS Trigger: GGACTGAAGGAAACCATCCCAATGCATGCTAGAATT...TATCTCCAGTGTTTCACTATTTGTAGAAAACCCAGACCCTGCAAACACCCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTGAAAAGGTACTTAAATGTACACAGTaGTCGACTTCACATCACCAT | + |
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Preference number: 2 (lower is better) Translates to: FLHCHVQTHLRIFKGEKVLKCTQ*STSHHH Trigger: ATGGTGATGTGAAGTCGACCACTGTGTACATTTAAG...TACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR CAA 90 bp | TTGTTGCTTTCTTGGATGGCATTTAAAGCATGCTCTCATCAAATATaGCTATACAAAGCACTTCAGTTTTCCTCTGCATTCCAGTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLLSWMAFKACSHQI*LYKALQFSSAFQLS Trigger: GGACAACTGGAATGCAGAGGAAAACTGAAGTGCTTTGTATAGCAATATTTGATGAGAGCATGCTTTAAATGCCATCCAAGAAAGCAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR GCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAATCAGCTCATTGTAAGTaGACAGAAATTTCCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SCIETKLSFLQWWLGMNKSAHCK*TEISPF Trigger: GAAAGGGGAAATTTCTGTGCACTTACAATGAGCTGA...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGAACTATCCGAACACTTTAGATATACTAGTGTGCATCCCCATGAGAAACACTCTAGAAATGCCTTTTaGTGGTTTGATTCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: TELSEHFRYTSVHPHEKHSRNAF*WFDSHL Trigger: AAGATGTGAATCAAACCACCAAAAGGCATTTCTAGA...GTGTTTCTCATGGGGATGCACACTAGTATATCTAAAGTGTTCGGATAGTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR CAA 90 bp | CTCCATATGATACACAGAAATAATTACATTTCACTTACAGTACAGTaGCACTTAACACCGTCATCAAAAGTCATTCACCACCAACACAGT | + |
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Preference number: 2 (lower is better) Translates to: LHMIHRNNYISLTVQ*HLTPSSKVIHHQHS Trigger: ACTGTGTTGGTGGTGAATGACTTTTGATGACGGTGTTAAGTGCAACTGTACTGTAAGTGAAATGTAATTATTTCTGTGTATCATATGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR GCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAATTAGATATACTAGTGTaGATCCCCATGAGAAACACT | + |
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Preference number: 2 (lower is better) Translates to: SCIETKLSFLQWWLGMNKLDILV*IPMRNT Trigger: AGTGTTTCTCATGGGGATGCACACTAGTATATCTAA...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR CCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACATTGTTGCTTTCTTaGATGGCATTTAAAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: SCIETKLSFLQWWLGMNKTLLLS*MAFKAC Trigger: GCATGCTTTAAATGCCATCCAAGAAAGCAACAATGT...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR GCA 90 bp | ATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACTTTTAATGGCATTTCATTGTaGTCATTCACAAAGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: IETKLSFLQWWLGMNKTFNGISL*SFTKSK Trigger: CTTTGACTTTGTGAATGAGCACAATGAAATGCCATT...AAAAGTTTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR TCA 72 bp | GTCAAAGGGCCACAGAGTCACCCTCTGTGGACAGGTTaGACGCTGTCTAGAAATGCCTTTTGGTGGTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: VKGPQSHPLWTG*TLSRNAFWWFD Trigger: ATCAAACCACCAAAAGGCATTTCTAGACAGCGTTCAACCTGTCCACAGAGGGTGACTCTGTGGCCCTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR CCA 72 bp | ACTGAGATCACTGCTCCAAAGAATTCTAGCATGCATTaGGATGGTTTCCTTCAGTCCACACAAATGGATCGT | + |
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Preference number: 3 (lower is better) Translates to: TEITAPKNSSMH*DGFLQSTQMDR Trigger: ACGATCCATTTGTGTGGACTGAAGGAAACCATCCCAATGCATGCTAGAATTCTTTGGAGCAGTGATCTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR-3UTR CAA 90 bp | CTTACAGTACAGTTGCACTTAACACCGTCATCAAAAGTCATTCACCACCAACACTCCCTCTTCCTGATTTaGCAGAGAACTTTGTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: LTVQLHLTPSSKVIHHQHSLFLI*QRTLCL Trigger: AAGGCACAAAGTTCTCTGCAAAATCAGGAAGAGGGA...GTGTTGGTGGTGAATGACTTTTGATGACGGTGTTAAGTGCAACTGTACTGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR CCA 72 bp | AAAGACACTAAAGAGATCCAGGGACAGATAATGCACTaGGTCACAGGAATACAGTGGACCAAAGAATACTAC | + |
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Preference number: 3 (lower is better) Translates to: KDTKEIQGQIMH*VTGIQWTKEYY Trigger: GTAGTATTCTTTGGTCCACTGTATTCCTGTGACCCAGTGCATTATCTGTCCCTGGATCTCTTTAGTGTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR TCA 72 bp | TCCCCTTTCTACAGGTATAGTTTGTCATGCCTATTCTaGAGACAACATAAGGAAACTGAGATCACTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SPFYRYSLSCLF*RQHKETEITAP Trigger: TGGAGCAGTGATCTCAGTTTCCTTATGTTGTCTTCAGAATAGGCATGACAAACTATACCTGTAGAAAGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR TCA 72 bp | TTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTaGAAAGGTAGCAAGACTTTTCACTTAAATGTACAC | + |
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Preference number: 3 (lower is better) Translates to: LSRADTSADIQG*KGSKTFHLNVH Trigger: GTGTACATTTAAGTGAAAAGTCTTGCTACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR GCA 72 bp | ATACTGAACTATCCGAACACTTTAGATATACTAGTGTaGATCCCCATGAGAAACACTGTGGTGCTAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: ILNYPNTLDILV*IPMRNTVVLKG Trigger: TCCTTTTAGCACCACAGTGTTTCTCATGGGGATGCACACTAGTATATCTAAAGTGTTCGGATAGTTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR TCA 72 bp | CAACTCCTTTACTCTAGTTGTTATCAAGGGGATTGGTaGCAGTCTTCTTATAATAACTGGTTGAGAAATACA | + |
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Preference number: 3 (lower is better) Translates to: QLLYSSCYQGDW*QSSYNNWLRNT Trigger: TGTATTTCTCAACCAGTTATTATAAGAAGACTGTCACCAATCCCCTTGATAACAACTAGAGTAAAGGAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| 3UTR GCA 72 bp | GATACATTGTTGCTTTCTTGGATGGCATTTAAAGCATaGTCTCATCAAATATTGCTATACAAAGCACTTCAG | + |
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Preference number: 3 (lower is better) Translates to: DTLLLSWMAFKA*SHQILLYKALQ Trigger: CTGAAGTGCTTTGTATAGCAATATTTGATGAGAGCATGCTTTAAATGCCATCCAAGAAAGCAACAATGTATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR GCA 90 bp | TCAGCTAAAACCCGGCCACACCAGGAGTTTTTCTATGAATGTGGCTCTCACTGTGCCCGCCAGACCCTCTaGCTAGCAGTCATGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SAKTRPHQEFFYECGSHCARQTL*LAVMVG Trigger: GCCCACCATGACTGCTAGGCAGAGGGTCTGGCGGGC...ACAGTGAGAGCCACATTCATAGAAAAACTCCTGGTGTGGCCGGGTTTTAGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR GCA 90 bp | TCAGCTAAAACCCGGCCACACCAGGAGTTTTTCTATGAATGTGGCTCTCACTGTGGCAAAGGGCAGCCATaGTGCAACACCGGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SAKTRPHQEFFYECGSHCGKGQP*CNTGCH Trigger: ATGGCAGCCGGTGTTGCAGCATGGCTGCCCTTTGCC...ACAGTGAGAGCCACATTCATAGAAAAACTCCTGGTGTGGCCGGGTTTTAGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | TCAGCTAAAACCCGGCCACACCAGGAGTTTTTCTATGAATGTGGCTCTCACTGTGCCATGGTGCTGGTGTaGGGATTCTCAAAGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: SAKTRPHQEFFYECGSHCAMVLV*GFSKAR Trigger: GCGGGCCTTTGAGAATCCCCACACCAGCACCATGGC...ACAGTGAGAGCCACATTCATAGAAAAACTCCTGGTGTGGCCGGGTTTTAGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR TCA 90 bp | TCAGCTAAAACCCGGCCACACCAGGAGTTTTTCTATGAATGTGGCTCTCACTGTGGTGACTCCTTGTTGTaGGGAGAGAGAGGGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: SAKTRPHQEFFYECGSHCGDSLL*GERGTV Trigger: CACAGTCCCTCTCTCTCCTCACAACAAGGAGTCACC...ACAGTGAGAGCCACATTCATAGAAAAACTCCTGGTGTGGCCGGGTTTTAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | GTCCTGTCATTAGTGGGTAAGCTCAGTGGAAAGACACTAAAGAGATCCAGGGACACCCAGCAGAGTGTCTaGGTATCGTTCCAGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VLSLVGKLSGKTLKRSRDTQQSV*VSFQGV Trigger: GACACCCTGGAACGATACCCAGACACTCTGCTGGGT...GTCCCTGGATCTCTTTAGTGTCTTTCCACTGAGCTTACCCACTAATGACAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | CCCACCATAGAACATGGACAATCAGCTCATTGTAAGTGCACAGAAATTTCCCCTCCTGTCGTCGCCTTCTaGGGTGGTTACTGGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PTIEHGQSAHCKCTEISPPVVAF*GGYWRC Trigger: ACACCTCCAGTAACCACCCCAGAAGGCGACGACAGG...AGGGGAAATTTCTGTGCACTTACAATGAGCTGATTGTCCATGTTCTATGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR GCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAACCACCCAATGGCGGCTaGCCTGGCAAAGGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SCIETKLSFLQWWLGMNKPPNGG*PGKGQP Trigger: TGGCTGCCCTTTGCCAGGGCAGCCGCCATTGGGTGG...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | TTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTGAAAAGGTATTTTCTCTCCTGTCTTaGGGGCGCAGGCATAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: FLHCHVQTHLRIFKGEKVFSLLS*GRRHRP Trigger: GGGCCTATGCCTGCGCCCCCAAGACAGGAGAGAAAA...TACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | GTCCTGTCATTAGTGGGTAAGCTCAGTGGAAAGACACTAAAGAGATCCAGGGACGTCGCCAATAATTTCTaGGATGAGGCCAAAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VLSLVGKLSGKTLKRSRDVANNF*DEAKEG Trigger: GCCTTCTTTGGCCTCATCCCAGAAATTATTGGCGAC...GTCCCTGGATCTCTTTAGTGTCTTTCCACTGAGCTTACCCACTAATGACAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | TGTCATGCCTATTCTGAAGACAACATAAGGAAACTGAGATCACTGCTCCAAAGAGGATCCTGGCCAGCCTaGCTTTCTTCTGTGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CHAYSEDNIRKLRSLLQRGSWPA*LSSVPF Trigger: GAAGGGCACAGAAGAAAGCCAGGCTGGCCAGGATCC...TCTTTGGAGCAGTGATCTCAGTTTCCTTATGTTGTCTTCAGAATAGGCATGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR TCA 90 bp | TGTCATGCCTATTCTGAAGACAACATAAGGAAACTGAGATCACTGCTCCAAAGAGACTTGATGGGCGATTaGCGGTGGCAACTTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: CHAYSEDNIRKLRSLLQRDLMGD*RWQLPC Trigger: GCATGGAAGTTGCCACCGTCAATCGCCCATCAAGTC...TCTTTGGAGCAGTGATCTCAGTTTCCTTATGTTGTCTTCAGAATAGGCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR GCA 90 bp | TGTCATGCCTATTCTGAAGACAACATAAGGAAACTGAGATCACTGCTCCAAAGAGTAACGACTAGGTGCTaGGGCCAGGCGAAGCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: CHAYSEDNIRKLRSLLQRVTTRC*GQAKQV Trigger: TACTTGCTTCGCCTGGCCGCAGCACCTAGTCGTTAC...TCTTTGGAGCAGTGATCTCAGTTTCCTTATGTTGTCTTCAGAATAGGCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR GCA 90 bp | CCTTGTGATACACTAGAATCTTTTGAGATACATTGTTGCTTTCTTGGATGGCATACTCCCGCTTTTGGCTaGTCGGATCCTGGCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PCDTLESFEIHCCFLGWHTPAFG*SDPGQP Trigger: AGGCTGGCCAGGATCCGAGCAGCCAAAAGCGGGAGT...ATGCCATCCAAGAAAGCAACAATGTATCTCAAAAGATTCTAGTGTATCACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | CCAACCTTCTTGCTTTGCTGTCTAAATATGCAAAAAGGGGTTATTATTTCTTCTCAATGGCGGCTGCCCTaGCAAAGGGCAGCCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: PTFLLCCLNMQKGVIISSQWRLP*QRAAML Trigger: CAGCATGGCTGCCCTTTGCCAGGGCAGCCGCCATTG...AGAAGAAATAATAACCCCTTTTTGCATATTTAGACAGCAAAGCAAGAAGGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | TTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTGAAAAGGTAGTGTCTTGCCATGTCTaGAAACGGGTGCCACTCACG | + |
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Preference number: 4 (lower is better) Translates to: FLHCHVQTHLRIFKGEKVVSCHV*KRVPLT Trigger: CGTGAGTGGCACCCGTTTCCAGACATGGCAAGACAC...TACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CCA 90 bp | ATATGGGTGTTTGCAGGGTCTGGGTTTTCTACAAATAGTGAAACACTGGAGATAGTGTCTGCATCATCCTaGAGGCGCTCAGCATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: IWVFAGSGFSTNSETLEIVSASS*RRSAFS Trigger: GGAGAATGCTGAGCGCCTCCAGGATGATGCAGACAC...TATCTCCAGTGTTTCACTATTTGTAGAAAACCCAGACCCTGCAAACACCCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR TCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAACTGCCGGGATGCTGGTaGACTTGCTTGCTGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SCIETKLSFLQWWLGMNKLPGCW*TCLLKS Trigger: GCTCTTCAGCAAGCAAGTTCACCAGCATCCCGGCAG...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR TCA 90 bp | ATATGGGTGTTTGCAGGGTCTGGGTTTTCTACAAATAGTGAAACACTGGAGATACTTTTTGTGTCTCCGTaGGCAGCAAGTGCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IWVFAGSGFSTNSETLEILFVSP*AASAGD Trigger: GTCACCAGCACTTGCTGCTCACGGAGACACAAAAAG...TATCTCCAGTGTTTCACTATTTGTAGAAAACCCAGACCCTGCAAACACCCATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | GGTTTCCTTCAGTCCACACAAATGGATCGTATGAATTTTTCATCAATAGCAATCACGGTAACGACTAGGTaGTGCGGCCAGGCGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GFLQSTQMDRMNFSSIAITVTTR*CGQAKQ Trigger: TTGCTTCGCCTGGCCGCAGCACCTAGTCGTTACCGT...GATTGCTATTGATGAAAAATTCATACGATCCATTTGTGTGGACTGAAGGAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | TGTCATGCCTATTCTGAAGACAACATAAGGAAACTGAGATCACTGCTCCAAAGACTGCATGTAGGCATTTaGACTCCCGCTTTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHAYSEDNIRKLRSLLQRLHVGI*TPAFGC Trigger: GCAGCCAAAAGCGGGAGTGCAAATGCCTACATGCAG...TCTTTGGAGCAGTGATCTCAGTTTCCTTATGTTGTCTTCAGAATAGGCATGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | TCAGCTAAAACCCGGCCACACCAGGAGTTTTTCTATGAATGTGGCTCTCACTGTGGTTACTGGAGGTGTTaGGATGCTTATTATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAKTRPHQEFFYECGSHCGYWRC*DAYYCC Trigger: ACAGCAATAATAAGCATCCCAACACCTCCAGTAACC...ACAGTGAGAGCCACATTCATAGAAAAACTCCTGGTGTGGCCGGGTTTTAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | GGTTTCCTTCAGTCCACACAAATGGATCGTATGAATTTTTCATCAATAGCAATCCGTCGCCTTCTGGGGTaGTTACTGGAGGTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFLQSTQMDRMNFSSIAIRRLLG*LLEVLG Trigger: TCCCAACACCTCCAGTAACCACCCCAGAAGGCGACG...GATTGCTATTGATGAAAAATTCATACGATCCATTTGTGTGGACTGAAGGAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR TCA 90 bp | CTTACAGTACAGTTGCACTTAACACCGTCATCAAAAGTCATTCACCACCAACACACTATCAGAGCGTCCTaGGTCCTTTTTCTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTVQLHLTPSSKVIHHQHTIRAS*VLFLSC Trigger: ACAGGAGAGAAAAAGGACTCAGGACGCTCTGATAGT...GTGTTGGTGGTGAATGACTTTTGATGACGGTGTTAAGTGCAACTGTACTGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR TCA 90 bp | CCTTGTGATACACTAGAATCTTTTGAGATACATTGTTGCTTTCTTGGATGGCATCCGTGCGGTAGAAGTTaGGGATGTGGCGGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PCDTLESFEIHCCFLGWHPCGRS*GCGGRC Trigger: ACATCTTCCGCCACATCCTCAACTTCTACCGCACGG...ATGCCATCCAAGAAAGCAACAATGTATCTCAAAAGATTCTAGTGTATCACAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | CCAACCTTCTTGCTTTGCTGTCTAAATATGCAAAAAGGGGTTATTATTTCTTCTCCAGGGCCATGGTGCTaGTGTGGGGATTCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTFLLCCLNMQKGVIISSPGPWC*CGDSQR Trigger: CCTTTGAGAATCCCCACACCAGCACCATGGCCCTGG...AGAAGAAATAATAACCCCTTTTTGCATATTTAGACAGCAAAGCAAGAAGGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTGAAAAGGTAGGCAGTTCTTTTATGTaGCCTGGGCTAGACCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLHCHVQTHLRIFKGEKVGSSFM*PGLDPH Trigger: ATGTGGGTCTAGCCCAGGCCACATAAAAGAACTGCC...TACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTTCTATGAATGTGGCTCTCACTGTATCTATGAATATATGGAAAGTCCATTGCACTCCCGCTTTTaGCTGCTCGGATCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFFYECGSHCIYEYMESPLHSRF*LLGSWP Trigger: TGGCCAGGATCCGAGCAGCCAAAAGCGGGAGTGCAA...TGGACTTTCCATATATTCATAGATACAGTGAGAGCCACATTCATAGAAAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | CTTACAGTACAGTTGCACTTAACACCGTCATCAAAAGTCATTCACCACCAACACTTCTGGGGTGGTTACTaGAGGTGTTGGGATGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTVQLHLTPSSKVIHHQHFWGGY*RCWDAY Trigger: ATAAGCATCCCAACACCTCCAGTAACCACCCCAGAA...GTGTTGGTGGTGAATGACTTTTGATGACGGTGTTAAGTGCAACTGTACTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR TCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAGGTGAACTTGCTTGCTaGAGAGCCCTTCTCTGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SCIETKLSFLQWWLGMNKGELAC*RALLCV Trigger: TACGCAGAGAAGGGCTCTTCAGCAAGCAAGTTCACC...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR TCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAAGCAGCAAGTGCTGGTaGCTCCTTGTTGTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCIETKLSFLQWWLGMNKSSKCW*LLVVRR Trigger: TCTCCTCACAACAAGGAGTCACCAGCACTTGCTGCT...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | CCAACCTTCTTGCTTTGCTGTCTAAATATGCAAAAAGGGGTTATTATTTCTTCTCGTTCCAGGGTGTCTTaGCATGTCTGGAAACGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTFLLCCLNMQKGVIISSRSRVS*HVWKRV Trigger: CACCCGTTTCCAGACATGGCAAGACACCCTGGAACG...AGAAGAAATAATAACCCCTTTTTGCATATTTAGACAGCAAAGCAAGAAGGTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAACCTGGCTTTCTTCTGTaGCCTTCGTTTGTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SCIETKLSFLQWWLGMNKPGFLL*PSFVCS Trigger: CGAGCAGACAAACGAAGGGCACAGAAGAAAGCCAGG...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | GAGTTTTTCTATGAATGTGGCTCTCACTGTATCTATGAATATATGGAAAGTCCAAGGACTGCAGCTGGTTaGTCAGTAGCCCATTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EFFYECGSHCIYEYMESPRTAAG*SVAHSA Trigger: AGCGGAATGGGCTACTGAGCAACCAGCTGCAGTCCT...TGGACTTTCCATATATTCATAGATACAGTGAGAGCCACATTCATAGAAAAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR TCA 90 bp | ATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACTTTTCACATTCGCGATGACTaGGACGGCAATGAAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: IETKLSFLQWWLGMNKTFHIRDD*DGNEEP Trigger: GGGTTCTTCATTGCCGTCTCAGTCATCGCGAATGTG...AAAAGTTTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAACTATCCGAACACTTTAGATATACTAGTGTGCATCCCCATGAGAAACACCGGTGGCAACTTCCATaGAGCTTTCTTCAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TELSEHFRYTSVHPHEKHRWQLP*SFLQRL Trigger: AAGTCTTTGAAGAAAGCTGCATGGAAGTTGCCACCG...GTGTTTCTCATGGGGATGCACACTAGTATATCTAAAGTGTTCGGATAGTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | CCTTGTGATACACTAGAATCTTTTGAGATACATTGTTGCTTTCTTGGATGGCATCCCTGCTATGGTTTTTaGTACCATGTCGCCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: PCDTLESFEIHCCFLGWHPCYGF*YHVAIP Trigger: GGGTATGGCGACATGGTACCAAAAACCATAGCAGGG...ATGCCATCCAAGAAAGCAACAATGTATCTCAAAAGATTCTAGTGTATCACAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | ATATGGGTGTTTGCAGGGTCTGGGTTTTCTACAAATAGTGAAACACTGGAGATATCATCGACAAACTCATaGTTCGTGGTTTTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWVFAGSGFSTNSETLEISSTNS*FVVFSR Trigger: CCTGGAGAAAACCACGAACCATGAGTTTGTCGATGA...TATCTCCAGTGTTTCACTATTTGTAGAAAACCCAGACCCTGCAAACACCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR TCA 90 bp | ATATGGGTGTTTGCAGGGTCTGGGTTTTCTACAAATAGTGAAACACTGGAGATATCCACACATCTGATCTaGATTGTACTGAGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IWVFAGSGFSTNSETLEISTHLI*IVLSSC Trigger: GCAAGAACTCAGTACAATTCAGATCAGATGTGTGGA...TATCTCCAGTGTTTCACTATTTGTAGAAAACCCAGACCCTGCAAACACCCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | ATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACTTTTATGTCTGGAAACGGGTaGCACTCACGTTCAGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: IETKLSFLQWWLGMNKTFMSGNG*HSRSAL Trigger: TAGTGCTGAACGTGAGTGGCACCCGTTTCCAGACAT...AAAAGTTTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTGAAAAGGTATTTTGGCATTTAAGCTaGATCGGCTGTTGGATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLHCHVQTHLRIFKGEKVFWHLS*IGCWIV Trigger: CACTATCCAACAGCCGATCCAGCTTAAATGCCAAAA...TACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | ATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACTTTTTGCCCTTCGTTTGTCTaGTCGTTGGTTTTGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IETKLSFLQWWLGMNKTFCPSFV*SLVLVV Trigger: TACCACCAAAACCAACGAGCAGACAAACGAAGGGCA...AAAAGTTTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | CCTTGTGATACACTAGAATCTTTTGAGATACATTGTTGCTTTCTTGGATGGCATCTGGAGGTGTTGGGATaGTTATTATTGCTGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PCDTLESFEIHCCFLGWHLEVLG*LLLLWS Trigger: TGACCACAGCAATAATAAGCATCCCAACACCTCCAG...ATGCCATCCAAGAAAGCAACAATGTATCTCAAAAGATTCTAGTGTATCACAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | ATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACTTTTTGGGCTAGACCCACATaGAACTGTTTCCACCACATT | + |
|
Preference number: 4 (lower is better) Translates to: IETKLSFLQWWLGMNKTFWARPT*NCFHHI Trigger: AATGTGGTGGAAACAGTTCCATGTGGGTCTAGCCCA...AAAAGTTTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR GCA 90 bp | CCTTGTGATACACTAGAATCTTTTGAGATACATTGTTGCTTTCTTGGATGGCATTGGGATGCTTATTATTaGTGTGGTCACGTAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PCDTLESFEIHCCFLGWHWDAYY*CGHVRL Trigger: CAACCTTACGTGACCACAGCAATAATAAGCATCCCA...ATGCCATCCAAGAAAGCAACAATGTATCTCAAAAGATTCTAGTGTATCACAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | GGTTTCCTTCAGTCCACACAAATGGATCGTATGAATTTTTCATCAATAGCAATCGTATTGTTGGGTCTCTaGGTGGTAGAAAAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLQSTQMDRMNFSSIAIVLLGL*VVEKVS Trigger: AGAGACTTTTTCTACCACCCAGAGACCCAACAATAC...GATTGCTATTGATGAAAAATTCATACGATCCATTTGTGTGGACTGAAGGAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | ATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACTTTTCACACTCTTCCATTTTaGCATTTAAGCTGGATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IETKLSFLQWWLGMNKTFHTLPF*HLSWIG Trigger: GCCGATCCAGCTTAAATGCCAAAATGGAAGAGTGTG...AAAAGTTTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CCA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAATGCTTATTATTGCTGTaGTCACGTAAGGTTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCIETKLSFLQWWLGMNKCLLLL*SRKVVH Trigger: GTGAACAACCTTACGTGACCACAGCAATAATAAGCA...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS TCA 90 bp | GTCTGGAAACGGGTGCCACTCACGTTCAGCACTATCAGAGCGTCCTaGGTCCTTTTTCTCTCCTGTCTTGGGGGCGCAGGCATAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VWKRVPLTFSTIRAS*VLFLSCLGGAGIGP Trigger: GGGGCCTATGCCTGCGCCCCCAAGACAGGAGAGAAAAAGGACTCAGGACGCTCTGATAGTGCTGAACGTGAGTGGCACCCGTTTCCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS GCA 90 bp | CATCCTCCGAGGACTGCAGCTGGTTGCTCAGTAGCCCATTCCGCTTaGTCTGCATGTAGGCATTTGCACTCCCGCTTTTGGCTGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPPRTAAGCSVAHSA*SACRHLHSRFWLLG Trigger: TCCGAGCAGCCAAAAGCGGGAGTGCAAATGCCTACATGCAGAGCAAGCGGAATGGGCTACTGAGCAACCAGCTGCAGTCCTCGGAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS CCA 90 bp | GGCCACCGCATACCTCTCCCCACAAGGCAGTTCTTTTATGTGGCCTaGGCTAGACCCACATGGAACTGTTTCCACCACATTCGCGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: GHRIPLPTRQFFYVA*ARPTWNCFHHIRDD Trigger: GTCATCGCGAATGTGGTGGAAACAGTTCCATGTGGGTCTAGCCCAGGCCACATAAAAGAACTGCCTTGTGGGGAGAGGTATGCGGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS CCA 90 bp | CTCCCGAATACTCAGGAGACTCGGGCCTGTCGTCGCCTTCTGGGGTaGTTACTGGAGGTGTTGGGATGCTTATTATTGCTGTGGTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: LPNTQETRACRRLLG*LLEVLGCLLLLWSR Trigger: ACGTGACCACAGCAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGACAGGCCCGAGTCTCCTGAGTATTCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS TCA 90 bp | CAGCAAGTGCTGGTGACTCCTTGTTGTGAGGAGAGAGAGGGACTGTaGCTTGATGGGCGATTGACGGTGGCAACTTCCATGCAGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QQVLVTPCCEEREGL*LDGRLTVATSMQLS Trigger: AGAAAGCTGCATGGAAGTTGCCACCGTCAATCGCCCATCAAGTCACAGTCCCTCTCTCTCCTCACAACAAGGAGTCACCAGCACTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS GCA 90 bp | TGTCTGGGTATCGTTCCAGGGTGTCTTGCCATGTCTGGAAACGGGTaGCACTCACGTTCAGCACTATCAGAGCGTCCTGAGTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLGIVPGCLAMSGNG*HSRSALSERPESFF Trigger: GAAAAAGGACTCAGGACGCTCTGATAGTGCTGAACGTGAGTGGCACCCGTTTCCAGACATGGCAAGACACCCTGGAACGATACCCAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS CCA 90 bp | TGGGTGGTAGAAAAAGTCTCTCTCAGAACTACCCAGCAGAGTGTCTaGGTATCGTTCCAGGGTGTCTTGCCATGTCTGGAAACGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WVVEKVSLRTTQQSV*VSFQGVLPCLETGA Trigger: GGCACCCGTTTCCAGACATGGCAAGACACCCTGGAACGATACCCAGACACTCTGCTGGGTAGTTCTGAGAGAGACTTTTTCTACCACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS CCA 90 bp | ATACTCAGGAGACTCGGGCCTGTCGTCGCCTTCTGGGGTGGTTACTaGAGGTGTTGGGATGCTTATTATTGCTGTGGTCACGTAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILRRLGPVVAFWGGY*RCWDAYYCCGHVRL Trigger: CAACCTTACGTGACCACAGCAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGACAGGCCCGAGTCTCCTGAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS CCA 90 bp | ATTTCCTCCCGAATACTCAGGAGACTCGGGCCTGTCGTCGCCTTCTaGGGTGGTTACTGGAGGTGTTGGGATGCTTATTATTGCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISSRILRRLGPVVAF*GGYWRCWDAYYCCG Trigger: ACCACAGCAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGACAGGCCCGAGTCTCCTGAGTATTCGGGAGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS CCA 90 bp | AGACTCGGGCCTGTCGTCGCCTTCTGGGGTGGTTACTGGAGGTGTTaGGATGCTTATTATTGCTGTGGTCACGTAAGGTTGTTCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLGPVVAFWGGYWRC*DAYYCCGHVRLFTV Trigger: AACTGTGAACAACCTTACGTGACCACAGCAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGACAGGCCCGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS GCA 90 bp | CGGGCCTGTCGTCGCCTTCTGGGGTGGTTACTGGAGGTGTTGGGATaGTTATTATTGCTGTGGTCACGTAAGGTTGTTCACAGTTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RACRRLLGWLLEVLG*LLLLWSRKVVHSLV Trigger: AACTAAACTGTGAACAACCTTACGTGACCACAGCAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGACAGGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS CCA 90 bp | GCGGAAGATGTCCGGGTCACGGTCAAAGAAGTATTGTTGGGTCTCTaGGTGGTAGAAAAAGTCTCTCTCAGAACTACCCAGCAGAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AEDVRVTVKEVLLGL*VVEKVSLRTTQQSV Trigger: GACACTCTGCTGGGTAGTTCTGAGAGAGACTTTTTCTACCACCCAGAGACCCAACAATACTTCTTTGACCGTGACCCGGACATCTTCCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS TCA 90 bp | CTGGATCGGCTGTTGGATAGTGGAGTTCTCTCCACACATCTGATCTaGATTGTACTGAGTTCTTGCACACTGCCTCTATGGCTTCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDRLLDSGVLSTHLI*IVLSSCTLPLWLPD Trigger: GTCGGGAAGCCATAGAGGCAGTGTGCAAGAACTCAGTACAATTCAGATCAGATGTGTGGAGAGAACTCCACTATCCAACAGCCGATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS TCA 90 bp | ACTTGTTCATCGACAAACTCATGGTTCGTGGTTTTCTCCAGGCAGTaGAGCAGGTGGTGGTGCTGTGTCTCAAAGCTGGATCCAGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TCSSTNSWFVVFSRQ*SRWWCCVSKLDPDL Trigger: CAAATCTGGATCCAGCTTTGAGACACAGCACCACCACCTGCTTCACTGCCTGGAGAAAACCACGAACCATGAGTTTGTCGATGAACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CAA 90 bp | TGTCATGCCTATTCTGAAGACAACATAAGGAAACTGAGATCACTGCTCCAAAGATTTGCACTCCCGCTTTaGGCTGCTCGGATCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CHAYSEDNIRKLRSLLQRFALPL*AARILA Trigger: GGCCAGGATCCGAGCAGCCAAAAGCGGGAGTGCAAA...TCTTTGGAGCAGTGATCTCAGTTTCCTTATGTTGTCTTCAGAATAGGCATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
||
| CDS-3UTR CAA 90 bp | TGTCATGCCTATTCTGAAGACAACATAAGGAAACTGAGATCACTGCTCCAAAGAGAGGACTGCAGCTGGTaGCTCAGTAGCCCATTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CHAYSEDNIRKLRSLLQREDCSW*LSSPFR Trigger: GCGGAATGGGCTACTGAGCAACCAGCTGCAGTCCTC...TCTTTGGAGCAGTGATCTCAGTTTCCTTATGTTGTCTTCAGAATAGGCATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | ATATGGGTGTTTGCAGGGTCTGGGTTTTCTACAAATAGTGAAACACTGGAGATACCACTGACATCCTCATaGTCTGTCATCACCAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: IWVFAGSGFSTNSETLEIPLTSS*SVITSP Trigger: TGGGCTGGTGATGACAGACAATGAGGATGTCAGTGG...TATCTCCAGTGTTTCACTATTTGTAGAAAACCCAGACCCTGCAAACACCCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | TTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTGAAAAGGTATCTGCATGTAGGCATTaGCACTCCCGCTTTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FLHCHVQTHLRIFKGEKVSACRH*HSRFWL Trigger: CAGCCAAAAGCGGGAGTGCAAATGCCTACATGCAGA...TACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | TCATGTATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAATCGTTCCAGGGTGTCTaGCCATGTCTGGAAACGGGT | + |
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Preference number: 5 (lower is better) Translates to: SCIETKLSFLQWWLGMNKSFQGV*PCLETG Trigger: ACCCGTTTCCAGACATGGCAAGACACCCTGGAACGA...TTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTATACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | TTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTGAAAAGGTAGTCTGCTCGTTGGTTTaGGTGGTAGATCCGACTGAA | + |
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Preference number: 5 (lower is better) Translates to: FLHCHVQTHLRIFKGEKVVCSLV*VVDPTE Trigger: TTCAGTCGGATCTACCACCAAAACCAACGAGCAGAC...TACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | CTTACAGTACAGTTGCACTTAACACCGTCATCAAAAGTCATTCACCACCAACACGTCAAAGAAGTATTGTaGGGTCTCTGGGTGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LTVQLHLTPSSKVIHHQHVKEVL*GLWVVE Trigger: TTCTACCACCCAGAGACCCAACAATACTTCTTTGAC...GTGTTGGTGGTGAATGACTTTTGATGACGGTGTTAAGTGCAACTGTACTGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | CCAACCTTCTTGCTTTGCTGTCTAAATATGCAAAAAGGGGTTATTATTTCTTCTGGGATGCTGGTGAACTaGCTTGCTGAAGAGCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PTFLLCCLNMQKGVIISSGMLVN*LAEEPF Trigger: GAAGGGCTCTTCAGCAAGCAAGTTCACCAGCATCCC...AGAAGAAATAATAACCCCTTTTTGCATATTTAGACAGCAAAGCAAGAAGGTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | CCTTGTGATACACTAGAATCTTTTGAGATACATTGTTGCTTTCTTGGATGGCATTTCTGTGCCCTTCGTTaGTCTGCTCGTTGGTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: PCDTLESFEIHCCFLGWHFCALR*SARWFW Trigger: CCAAAACCAACGAGCAGACAAACGAAGGGCACAGAA...ATGCCATCCAAGAAAGCAACAATGTATCTCAAAAGATTCTAGTGTATCACAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | ATATGGGTGTTTGCAGGGTCTGGGTTTTCTACAAATAGTGAAACACTGGAGATAACACACTCTTCCATTTaGGCATTTAAGCTGGATCGG | + |
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Preference number: 5 (lower is better) Translates to: IWVFAGSGFSTNSETLEITHSSI*AFKLDR Trigger: CCGATCCAGCTTAAATGCCAAAATGGAAGAGTGTGT...TATCTCCAGTGTTTCACTATTTGTAGAAAACCCAGACCCTGCAAACACCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | GAGTTTTTCTATGAATGTGGCTCTCACTGTATCTATGAATATATGGAAAGTCCATCCCTGCTATGGTTTTaGGTACCATGTCGCCATACC | + |
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Preference number: 5 (lower is better) Translates to: EFFYECGSHCIYEYMESPSLLWF*VPCRHT Trigger: GGTATGGCGACATGGTACCAAAAACCATAGCAGGGA...TGGACTTTCCATATATTCATAGATACAGTGAGAGCCACATTCATAGAAAAACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | ATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACTTTTTCGTTTGTCTGCTCGTaGGTTTTGGTGGTAGATCCG | + |
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Preference number: 5 (lower is better) Translates to: IETKLSFLQWWLGMNKTFSFVCS*VLVVDP Trigger: CGGATCTACCACCAAAACCAACGAGCAGACAAACGA...AAAAGTTTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | CCAACCTTCTTGCTTTGCTGTCTAAATATGCAAAAAGGGGTTATTATTTCTTCTACGGTCAAAGAAGTATaGTTGGGTCTCTGGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PTFLLCCLNMQKGVIISSTVKEV*LGLWVV Trigger: TACCACCCAGAGACCCAACAATACTTCTTTGACCGT...AGAAGAAATAATAACCCCTTTTTGCATATTTAGACAGCAAAGCAAGAAGGTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | TTTTTACATTGTCACGTGCAGACACATCTGCGGATATTCAAGGGTGAAAAGGTAGCTTTCTTCAAAGACTaGTTCATCGACAAACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FLHCHVQTHLRIFKGEKVAFFKD*FIDKLM Trigger: CATGAGTTTGTCGATGAACAAGTCTTTGAAGAAAGC...TACCTTTTCACCCTTGAATATCCGCAGATGTGTCTGCACGTGACAATGTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | GAGTTTTTCTATGAATGTGGCTCTCACTGTATCTATGAATATATGGAAAGTCCAAATTGTACTGAGTTCTaGCACACTGCCTCTATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EFFYECGSHCIYEYMESPNCTEF*HTASMA Trigger: AGCCATAGAGGCAGTGTGCAAGAACTCAGTACAATT...TGGACTTTCCATATATTCATAGATACAGTGAGAGCCACATTCATAGAAAAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | ATAGAAACTAAGCTTTCGTTCTTACAGTGGTGGCTTGGAATGAACAAAACTTTTTGGTTACTGGAGGTGTaGGGATGCTTATTATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IETKLSFLQWWLGMNKTFWLLEV*GCLLLL Trigger: CAGCAATAATAAGCATCCCAACACCTCCAGTAACCA...AAAAGTTTTGTTCATTCCAAGCCACCACTGTAAGAACGAAAGCTTAGTTTCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS-3UTR CAA 90 bp | GAGTTTTTCTATGAATGTGGCTCTCACTGTATCTATGAATATATGGAAAGTCCATTGGGATGCTTATTATaGCTGTGGTCACGTAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: EFFYECGSHCIYEYMESPLGCLL*LWSRKV Trigger: AACCTTACGTGACCACAGCAATAATAAGCATCCCAA...TGGACTTTCCATATATTCATAGATACAGTGAGAGCCACATTCATAGAAAAACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS TCA 72 bp | CGGGTGCCACTCACGTTCAGCACTATCAGAGCGTCCTaGGTCCTTTTTCTCTCCTGTCTTGGGGGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RVPLTFSTIRAS*VLFLSCLGGAG Trigger: GCCTGCGCCCCCAAGACAGGAGAGAAAAAGGACTCAGGACGCTCTGATAGTGCTGAACGTGAGTGGCACCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS GCA 72 bp | GGTGGGCAGCGCACTCTCTCCTGTATTGTCAGTGTCTaGATCATCCTGGAGGCGCTCAGCATTCTCCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GGQRTLSCIVSV*IILEALSILPP Trigger: AGGCGGGAGAATGCTGAGCGCCTCCAGGATGATGCAGACACTGACAATACAGGAGAGAGTGCGCTGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 90 bp | ACCCTCTGCCTAGCAGTCATGGTGGGCAGCGCACTCTCTCCTGTATaGTCAGTGTCTGCATCATCCTGGAGGCGCTCAGCATTCTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: TLCLAVMVGSALSPV*SVSASSWRRSAFSR Trigger: GCGGGAGAATGCTGAGCGCCTCCAGGATGATGCAGACACTGACAATACAGGAGAGAGTGCGCTGCCCACCATGACTGCTAGGCAGAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CCA 72 bp | GCACTCTCTCCTGTATTGTCAGTGTCTGCATCATCCTaGAGGCGCTCAGCATTCTCCCGCCTGCGGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ALSPVLSVSASS*RRSAFSRLRSL Trigger: CAAGGACCGCAGGCGGGAGAATGCTGAGCGCCTCCAGGATGATGCAGACACTGACAATACAGGAGAGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CCA 72 bp | CTTATGAAGGCCGGTTCATCCTCCGAGGACTGCAGCTaGTTGCTCAGTAGCCCATTCCGCTTGCTCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LMKAGSSSEDCS*LLSSPFRLLCM Trigger: CATGCAGAGCAAGCGGAATGGGCTACTGAGCAACCAGCTGCAGTCCTCGGAGGATGAACCGGCCTTCATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 72 bp | CTAGCAGTCATGGTGGGCAGCGCACTCTCTCCTGTATaGTCAGTGTCTGCATCATCCTGGAGGCGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LAVMVGSALSPV*SVSASSWRRSA Trigger: TGCTGAGCGCCTCCAGGATGATGCAGACACTGACAATACAGGAGAGAGTGCGCTGCCCACCATGACTGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS GCA 72 bp | ATCGTTCCAGGGTGTCTTGCCATGTCTGGAAACGGGTaGCACTCACGTTCAGCACTATCAGAGCGTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: IVPGCLAMSGNG*HSRSALSERPE Trigger: CTCAGGACGCTCTGATAGTGCTGAACGTGAGTGGCACCCGTTTCCAGACATGGCAAGACACCCTGGAACGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS GCA 72 bp | AGGACTGCAGCTGGTTGCTCAGTAGCCCATTCCGCTTaGTCTGCATGTAGGCATTTGCACTCCCGCTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RTAAGCSVAHSA*SACRHLHSRFW Trigger: CCAAAAGCGGGAGTGCAAATGCCTACATGCAGAGCAAGCGGAATGGGCTACTGAGCAACCAGCTGCAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CCA 72 bp | AGACTCGGGCCTGTCGTCGCCTTCTGGGGTGGTTACTaGAGGTGTTGGGATGCTTATTATTGCTGTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: RLGPVVAFWGGY*RCWDAYYCCGH Trigger: GTGACCACAGCAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGACAGGCCCGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 90 bp | CAGCCTGGCTTTCTTCTGTGCCCTTCGTTTGTCTGCTCGTTGGTTTaGGTGGTAGATCCGACTGAAGTTCGACACGATCACAGGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: QPGFLLCPSFVCSLV*VVDPTEVRHDHRHG Trigger: CCCGTGCCTGTGATCGTGTCGAACTTCAGTCGGATCTACCACCAAAACCAACGAGCAGACAAACGAAGGGCACAGAAGAAAGCCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS TCA 72 bp | CTGGTGACTCCTTGTTGTGAGGAGAGAGAGGGACTGTaGCTTGATGGGCGATTGACGGTGGCAACTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LVTPCCEEREGL*LDGRLTVATSM Trigger: CATGGAAGTTGCCACCGTCAATCGCCCATCAAGTCACAGTCCCTCTCTCTCCTCACAACAAGGAGTCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS GCA 72 bp | CATGACACTGCGCACGAAACGGTAACGACTAGGTGCTaGGGCCAGGCGAAGCAAGTACTCAACTGTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: HDTAHETVTTRC*GQAKQVLNCED Trigger: ATCTTCACAGTTGAGTACTTGCTTCGCCTGGCCGCAGCACCTAGTCGTTACCGTTTCGTGCGCAGTGTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CCA 72 bp | CGAATACTCAGGAGACTCGGGCCTGTCGTCGCCTTCTaGGGTGGTTACTGGAGGTGTTGGGATGCTTATTAT | + |
|
Preference number: 6 (lower is better) Translates to: RILRRLGPVVAF*GGYWRCWDAYY Trigger: ATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGACAGGCCCGAGTCTCCTGAGTATTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CCA 72 bp | CCTGTCGTCGCCTTCTGGGGTGGTTACTGGAGGTGTTaGGATGCTTATTATTGCTGTGGTCACGTAAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PVVAFWGGYWRC*DAYYCCGHVRL Trigger: CAACCTTACGTGACCACAGCAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 90 bp | GAGGATGTGGCGGAAGATGTCCGGGTCACGGTCAAAGAAGTATTGTaGGGTCTCTGGGTGGTAGAAAAAGTCTCTCTCAGAACTACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EDVAEDVRVTVKEVL*GLWVVEKVSLRTTQ Trigger: CTGGGTAGTTCTGAGAGAGACTTTTTCTACCACCCAGAGACCCAACAATACTTCTTTGACCGTGACCCGGACATCTTCCGCCACATCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS TCA 72 bp | AAGTCTTTTTGTGTCTCCGTGAGCAGCAAGTGCTGGTaGCTCCTTGTTGTGAGGAGAGAGAGGGACTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: KSFCVSVSSKCW*LLVVRRERDCD Trigger: GTCACAGTCCCTCTCTCTCCTCACAACAAGGAGTCACCAGCACTTGCTGCTCACGGAGACACAAAAAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS GCA 72 bp | CGTCGCCTTCTGGGGTGGTTACTGGAGGTGTTGGGATaGTTATTATTGCTGTGGTCACGTAAGGTTGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRLLGWLLEVLG*LLLLWSRKVVH Trigger: GTGAACAACCTTACGTGACCACAGCAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 72 bp | GTGGCGGAAGATGTCCGGGTCACGGTCAAAGAAGTATaGTTGGGTCTCTGGGTGGTAGAAAAAGTCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VAEDVRVTVKEV*LGLWVVEKVSL Trigger: GAGAGAGACTTTTTCTACCACCCAGAGACCCAACAATACTTCTTTGACCGTGACCCGGACATCTTCCGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 90 bp | CTATGGCTTCCCGACACATTGGCATTAGGAATGCGGAAAGTCTTTTaGTGTCTCCGTGAGCAGCAAGTGCTGGTGACTCCTTGTTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LWLPDTLALGMRKVF*CLREQQVLVTPCCE Trigger: CTCACAACAAGGAGTCACCAGCACTTGCTGCTCACGGAGACACAAAAAGACTTTCCGCATTCCTAATGCCAATGTGTCGGGAAGCCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CCA 72 bp | GAAAAAGTCTCTCTCAGAACTACCCAGCAGAGTGTCTaGGTATCGTTCCAGGGTGTCTTGCCATGTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EKVSLRTTQQSV*VSFQGVLPCLE Trigger: TTCCAGACATGGCAAGACACCCTGGAACGATACCCAGACACTCTGCTGGGTAGTTCTGAGAGAGACTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CCA 72 bp | GTCCGGGTCACGGTCAAAGAAGTATTGTTGGGTCTCTaGGTGGTAGAAAAAGTCTCTCTCAGAACTACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VRVTVKEVLLGL*VVEKVSLRTTQ Trigger: CTGGGTAGTTCTGAGAGAGACTTTTTCTACCACCCAGAGACCCAACAATACTTCTTTGACCGTGACCCGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 72 bp | GCGGAAGATGTCCGGGTCACGGTCAAAGAAGTATTGTaGGGTCTCTGGGTGGTAGAAAAAGTCTCTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AEDVRVTVKEVL*GLWVVEKVSLR Trigger: TCTGAGAGAGACTTTTTCTACCACCCAGAGACCCAACAATACTTCTTTGACCGTGACCCGGACATCTTCCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 90 bp | TGGGCGATTGACGGTGGCAACTTCCATGCAGCTTTCTTCAAAGACTaGTTCATCGACAAACTCATGGTTCGTGGTTTTCTCCAGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WAIDGGNFHAAFFKD*FIDKLMVRGFLQAV Trigger: CACTGCCTGGAGAAAACCACGAACCATGAGTTTGTCGATGAACAAGTCTTTGAAGAAAGCTGCATGGAAGTTGCCACCGTCAATCGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 72 bp | TTTCTTCTGTGCCCTTCGTTTGTCTGCTCGTTGGTTTaGGTGGTAGATCCGACTGAAGTTCGACACGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: FLLCPSFVCSLV*VVDPTEVRHDH Trigger: GTGATCGTGTCGAACTTCAGTCGGATCTACCACCAAAACCAACGAGCAGACAAACGAAGGGCACAGAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 90 bp | ATTGTACTGAGTTCTTGCACACTGCCTCTATGGCTTCCCGACACATaGGCATTAGGAATGCGGAAAGTCTTTTTGTGTCTCCGTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IVLSSCTLPLWLPDT*ALGMRKVFLCLREQ Trigger: CTGCTCACGGAGACACAAAAAGACTTTCCGCATTCCTAATGCCAATGTGTCGGGAAGCCATAGAGGCAGTGTGCAAGAACTCAGTACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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| CDS CAA 72 bp | GACGGTGGCAACTTCCATGCAGCTTTCTTCAAAGACTaGTTCATCGACAAACTCATGGTTCGTGGTTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DGGNFHAAFFKD*FIDKLMVRGFL Trigger: GAGAAAACCACGAACCATGAGTTTGTCGATGAACAAGTCTTTGAAGAAAGCTGCATGGAAGTTGCCACCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081542.6 |
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