Pregenerated sensors for KCND1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009731Ensembl transcript IDs: ENSMUST00000009875.5
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTACCTACGTTCCCACCAGGTGGGCCATTCCATGAAACTCCATTaGATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCAGGTCTGCCC | + |
|
Preference number: 1 (lower is better) Translates to: PYLRSHQVGHSMKLH*IVLVRRHREFPGLP Trigger: GGGCAGACCTGGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGAATGGCCCACCTGGTGGGAACGTAGGTAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 90 bp | AGCAGGTCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTaGATTCCAAGCTTCCAAATCCGGGAAATGCTGGGCCTGTTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SRSLQRPQPIKPAQG*IPSFQIREMLGLLK Trigger: CTTCAACAGGCCCAGCATTTCCCGGATTTGGAAGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGACCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CCA 90 bp | GATTGGTCTCCACAGGGCTCTCCACAACTCACTCACATACTAGCCTaGTGTAGCTGGTATCCAGAAGAGAACAGCAGAGGCACTATCCAT | + |
|
Preference number: 1 (lower is better) Translates to: DWSPQGSPQLTHILA*CSWYPEENSRGTIH Trigger: ATGGATAGTGCCTCTGCTGTTCTCTTCTGGATACCAGCTACACCAGGCTAGTATGTGAGTGAGTTGTGGAGAGCCCTGTGGAGACCAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 90 bp | AAGAATATGAAACCAGCCCATGATCTCACCACCCAGTCCAGCTCTTaGTGGATGTTAGTCTCTTATCTCAGCAGGTCCAGACTCCAGACC | + |
|
Preference number: 1 (lower is better) Translates to: KNMKPAHDLTTQSSS*WMLVSYLSRSRLQT Trigger: GGTCTGGAGTCTGGACCTGCTGAGATAAGAGACTAACATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGCTGGTTTCATATTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CCA 90 bp | AATATGAAACCAGCCCATGATCTCACCACCCAGTCCAGCTCTTGCTaGATGTTAGTCTCTTATCTCAGCAGGTCCAGACTCCAGACCAAC | + |
|
Preference number: 1 (lower is better) Translates to: NMKPAHDLTTQSSSC*MLVSYLSRSRLQTN Trigger: GTTGGTCTGGAGTCTGGACCTGCTGAGATAAGAGACTAACATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGCTGGTTTCATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR TCA 90 bp | CCACACTACTTCTGGACTTCTGCCCAAGAATATGAAACCAGCCCATaGTCTCACCACCCAGTCCAGCTCTTGCTGGATGTTAGTCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: PHYFWTSAQEYETSP*SHHPVQLLLDVSLL Trigger: TAAGAGACTAACATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGCTGGTTTCATATTCTTGGGCAGAAGTCCAGAAGTAGTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CCA 90 bp | ATGTATATGCTGCAGCAAATTGGTCCAAGGCTTTGCATATTGGTATaGCAGCAGCTGCTATTGCTAGAGTTTGCTGGAGGCCCAGCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: MYMLQQIGPRLCILV*QQLLLLEFAGGPAE Trigger: TTCTGCTGGGCCTCCAGCAAACTCTAGCAATAGCAGCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 90 bp | AGAGTAGTTAGATGTGGCCCATCTGATCAGAGCAGATGTATATGCTaGAGCAAATTGGTCCAAGGCTTTGCATATTGGTATGGCAGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: RVVRCGPSDQSRCIC*SKLVQGFAYWYGSS Trigger: GCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGGGCCACATCTAACTACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR TCA 90 bp | AGAGTCAGTAGATGCTCAGTCCACATCTCTCCTCTTAGGCTTTATTaGCTGATGAAAACTTCATCTTTGTCAGCTGCCAGCTTCAGAGGG | + |
|
Preference number: 1 (lower is better) Translates to: RVSRCSVHISPLRLY*LMKTSSLSAASFRG Trigger: CCCTCTGAAGCTGGCAGCTGACAAAGATGAAGTTTTCATCAGTCAATAAAGCCTAAGAGGAGAGATGTGGACTGAGCATCTACTGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR TCA 90 bp | ACACCAGTCCCTTCACTGTTGAATTTCTCTTCGACTGAAAGAAATTaGGACCATAGTGTTCTTAACCCCTCAGCCAAACCCAGCCCTCAA | + |
|
Preference number: 1 (lower is better) Translates to: TPVPSLLNFSSTERN*DHSVLNPSAKPSPQ Trigger: TTGAGGGCTGGGTTTGGCTGAGGGGTTAAGAACACTATGGTCTCAATTTCTTTCAGTCGAAGAGAAATTCAACAGTGAAGGGACTGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 90 bp | AAGAGAGTAGTTAGATGTGGCCCATCTGATCAGAGCAGATGTATATaGTGCAGCAAATTGGTCCAAGGCTTTGCATATTGGTATGGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: KRVVRCGPSDQSRCI*CSKLVQGFAYWYGS Trigger: GCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGGGCCACATCTAACTACTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CCA 90 bp | GGGCTTAAGTTGCTCCTCAAAGTAACTCCATGGTGCTCTAAATCTTaGCTTCTCCTTCTAGCAATGAAGGATCTGGAACAGATTAGTATC | + |
|
Preference number: 1 (lower is better) Translates to: GLKLLLKVTPWCSKS*LLLLAMKDLEQISI Trigger: GATACTAATCTGTTCCAGATCCTTCATTGCTAGAAGGAGAAGCCAAGATTTAGAGCACCATGGAGTTACTTTGAGGAGCAACTTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 90 bp | TCCCTACCTACGTTCCCACCAGGTGGGCCATTCCATGAAACTCCATaGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCAGGTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLPTFPPGGPFHETP*HSSCQAAQGVPRSA Trigger: GGCAGACCTGGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGAATGGCCCACCTGGTGGGAACGTAGGTAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGGACCCTCTGGCTGGCTTCACTGCCTACAGAGACAAACTCTTCAAAGCACGGGAGTTCCCAGGTCTaGCCCTCTTTGCCTCCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LRTLWLASLPTETNSSKHGSSQV*PSLPPP Trigger: TGGGGGAGGCAAAGAGGGGCAGACCTGGGAACTCCC...GTGCTTTGAAGAGTTTGTCTCTGTAGGCAGTGAAGCCAGCCAGAGGGTCCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CCA 90 bp | GGTCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTGCCTCCCCCAAAATATaGCTTTGGAAAGGAGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GHYRGHSPLSQPRVAFQAASPKI*LWKGVP Trigger: GGGAACTCCTTTCCAAAGCCATATTTTGGGGGAGGC...AGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 90 bp | CAGGGTTGCATTCCAAGCTTCCAAATCCGGGAAATGCTGGGCCTGTaGAAGGGCAAAACCTTGCCCCTCGAGGCTAAATTGGAGATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QGCIPSFQIREMLGL*KGKTLPLEAKLEMR Trigger: CCTCATCTCCAATTTAGCCTCGAGGGGCAAGGTTTTGCCCTTCAACAGGCCCAGCATTTCCCGGATTTGGAAGCTTGGAATGCAACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CCA 90 bp | GCCCATGATCTCACCACCCAGTCCAGCTCTTGCTGGATGTTAGTCTCTTATCTCCCAGCAGAAGACAGGTaGTGGGAACTCACTTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: AHDLTTQSSSCWMLVSYLPAEDR*WELTSS Trigger: GCTGGAAGTGAGTTCCCACCACCTGTCTTCTGCTGG...GAGATAAGAGACTAACATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 90 bp | ATGCTGGGCCTGTTGAAGGGCAAAACCTTGCCCCTCGAGGCTAAATaGGAGATGAGGGTTCTCTTCCCTGAACTCCCAAACTTGCACAAC | + |
|
Preference number: 2 (lower is better) Translates to: MLGLLKGKTLPLEAK*EMRVLFPELPNLHN Trigger: GTTGTGCAAGTTTGGGAGTTCAGGGAAGAGAACCCTCATCTCCAATTTAGCCTCGAGGGGCAAGGTTTTGCCCTTCAACAGGCCCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 90 bp | AGCTTCCAAATCCGGGAAATGCTGGGCCTGTTGAAGGGCAAAACCTaGCCCCTCGAGGCTAAATTGGAGATGAGGGTTCTCTTCCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SFQIREMLGLLKGKT*PLEAKLEMRVLFPE Trigger: TTCAGGGAAGAGAACCCTCATCTCCAATTTAGCCTCGAGGGGCAAGGTTTTGCCCTTCAACAGGCCCAGCATTTCCCGGATTTGGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTTCCATGAAACTCCATTaGATAGTTCTTGTCAGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: GHYRGHSPLSQPRVAFQASMKLH*IVLVRR Trigger: CCGCCTGACAAGAACTATGCAATGGAGTTTCATGGA...AGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 90 bp | CAAATTGGTCCAAGGCTTTGCATATTGGTATGGCAGCAGCTGCTATaGCTAGAGTTTGCTGGAGGCCCAGCAGAAGACAGGTGGTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QIGPRLCILVWQQLL*LEFAGGPAEDRWWE Trigger: TTCCCACCACCTGTCTTCTGCTGGGCCTCCAGCAAACTCTAGCAATAGCAGCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTAGATGTGGCCCATCTGATCAGAGCAGATGTATATGCTGCAGCAAATTGGTCTTGGGAGAAGCAGCCTaGCCCCCTCAGCCAAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VRCGPSDQSRCICCSKLVLGEAA*PPQPKH Trigger: ATGCTTTGGCTGAGGGGGTCAGGCTGCTTCTCCCAA...GACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGGGCCACATCTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTCTGAACTCCCAAACTTaGACAACACAACCAAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GHYRGHSPLSQPRVAFQALNSQT*TTQPKR Trigger: TCTCTTTGGTTGTGTTGTGCAAGTTTGGGAGTTCAG...AGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTAACAGTTCAGTCCTCTaGCCACACTACTTCTGGACT | + |
|
Preference number: 2 (lower is better) Translates to: SVESIDPEGDPRGRRRQCNSSVL*PHYFWT Trigger: AGTCCAGAAGTAGTGTGGGCAGAGGACTGAACTGTT...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 90 bp | GAGCAGATGTATATGCTGCAGCAAATTGGTCCAAGGCTTTGCATATaGGTATGGCAGCAGCTGCTATTGCTAGAGTTTGCTGGAGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EQMYMLQQIGPRLCI*VWQQLLLLEFAGGP Trigger: TGGGCCTCCAGCAAACTCTAGCAATAGCAGCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTCAGTCCAGCTCTTGCTaGATGTTAGTCTCTTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: SVESIDPEGDPRGRRRQCQSSSC*MLVSYL Trigger: GAGATAAGAGACTAACATCCAGCAAGAGCTGGACTG...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTAGATGTGGCCCATCTGATCAGAGCAGATGTATATGCTGCAGCAAATTGGTCGAGGGTTCTCTTCCCTaGACTCCCAAACTTGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: VRCGPSDQSRCICCSKLVEGSLP*TPKLAQ Trigger: TTGTGCAAGTTTGGGAGTTCAGGGAAGAGAACCCTC...GACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGGGCCACATCTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 90 bp | CTGATCAGAGCAGATGTATATGCTGCAGCAAATTGGTCCAAGGCTTaGCATATTGGTATGGCAGCAGCTGCTATTGCTAGAGTTTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LIRADVYAAANWSKA*HIGMAAAAIARVCW Trigger: CCAGCAAACTCTAGCAATAGCAGCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CCA 90 bp | CCATTCCATGAAACTCCATTGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCCCCAAAATATGGCTTTaGAAAGGAGTTCCCAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PFHETPLHSSCQAAQGVPPKIWL*KGVPKN Trigger: ATTCTTGGGAACTCCTTTCCAAAGCCATATTTTGGG...GGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGAATGG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CCA 90 bp | AAGAATATGAAACCAGCCCATGATCTCACCACCCAGTCCAGCTCTTGCTGGATGACTAGAAAAACTGTCTaGACTGAGGGAAGTTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KNMKPAHDLTTQSSSCWMTRKTV*TEGSSS Trigger: TGAGGAACTTCCCTCAGTCCAGACAGTTTTTCTAGT...CATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGCTGGTTTCATATTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTCTGGCTGGCTTCACTGCCTACAGAGACAAACTCTTCAAAGCACCCTTTTCTTTGCATATTGGTATaGCAGCAGCTGCTATTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: TLWLASLPTETNSSKHPFLCILV*QQLLLL Trigger: TAGCAATAGCAGCTGCTGCCATACCAATATGCAAAG...AAAAGGGTGCTTTGAAGAGTTTGTCTCTGTAGGCAGTGAAGCCAGCCAGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTCTGGCTGGCTTCACTGCCTACAGAGACAAACTCTTCAAAGCACCCTTTTTATGCTGCAGCAAATTaGTCCAAGGCTTTGCATATT | + |
|
Preference number: 2 (lower is better) Translates to: TLWLASLPTETNSSKHPFYAAAN*SKALHI Trigger: AATATGCAAAGCCTTGGACCAATTTGCTGCAGCATA...AAAAGGGTGCTTTGAAGAGTTTGTCTCTGTAGGCAGTGAAGCCAGCCAGAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGCATGGGCTTAAGTTGCTCCTCAAAGTAACTCCATGGTGCTCTAAATCTCCTCTTAGGCTTTATTaGCTGATGAAAACTTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: RKHGLKLLLKVTPWCSKSPLRLY*LMKTSS Trigger: AGATGAAGTTTTCATCAGTCAATAAAGCCTAAGAGG...AGATTTAGAGCACCATGGAGTTACTTTGAGGAGCAACTTAAGCCCATGCTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 72 bp | CGTTCCCACCAGGTGGGCCATTCCATGAAACTCCATTaGATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RSHQVGHSMKLH*IVLVRRHREFP Trigger: TGGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGAATGGCCCACCTGGTGGGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CCA 72 bp | ATTGGTATGGCAGCAGCTGCTATTGCTAGAGTTTGCTaGAGGCCCAGCAGAAGACAGGTGGTGGGAACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: IGMAAAAIARVC*RPSRRQVVGTH Trigger: GTGAGTTCCCACCACCTGTCTTCTGCTGGGCCTCCAGCAAACTCTAGCAATAGCAGCTGCTGCCATACCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTCCTGAACTCCCAAACTaGCACAACACAACCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GHYRGHSPLSQPRVAFQAPELPN*HNTTKE Trigger: CTCTTTGGTTGTGTTGTGCAAGTTTGGGAGTTCAGG...AGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR TCA 72 bp | TTCCAAGCTTCCAAATCCGGGAAATGCTGGGCCTGTTaGAGGGCAAAACCTTGCCCCTCGAGGCTAAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: FQASKSGKCWAC*RAKPCPSRLNW Trigger: CCAATTTAGCCTCGAGGGGCAAGGTTTTGCCCTTCAACAGGCCCAGCATTTCCCGGATTTGGAAGCTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 72 bp | CATATTGGTATGGCAGCAGCTGCTATTGCTAGAGTTTaGTGGAGGCCCAGCAGAAGACAGGTGGTGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: HIGMAAAAIARV*WRPSRRQVVGT Trigger: AGTTCCCACCACCTGTCTTCTGCTGGGCCTCCAGCAAACTCTAGCAATAGCAGCTGCTGCCATACCAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTCCAAGGCTTTGCATATaGGTATGGCAGCAGCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SVESIDPEGDPRGRRRQCPRLCI*VWQQLL Trigger: TAGCAGCTGCTGCCATACCAATATGCAAAGCCTTGG...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 72 bp | AAACCAGCCCATGATCTCACCACCCAGTCCAGCTCTTaGTGGATGTTAGTCTCTTATCTCAGCAGGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPAHDLTTQSSS*WMLVSYLSRSR Trigger: TCTGGACCTGCTGAGATAAGAGACTAACATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGCTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 72 bp | CTATCTCTCCCAGGGGTCAGGAACAGTTCAGTCCTCTaGCCACACTACTTCTGGACTTCTGCCCAAGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: LSLPGVRNSSVL*PHYFWTSAQEY Trigger: ATATTCTTGGGCAGAAGTCCAGAAGTAGTGTGGGCAGAGGACTGAACTGTTCCTGACCCCTGGGAGAGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CCA 72 bp | CTGCAGCAAATTGGTCCAAGGCTTTGCATATTGGTATaGCAGCAGCTGCTATTGCTAGAGTTTGCTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LQQIGPRLCILV*QQLLLLEFAGG Trigger: GCCTCCAGCAAACTCTAGCAATAGCAGCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR-3UTR CAA 90 bp | GATCAGAGCAGATGTATATGCTGCAGCAAATTGGTCCAAGGCTTTGCATATTGGGAAATGCTGGGCCTGTaGAAGGGCAAAACCTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DQSRCICCSKLVQGFAYWEMLGL*KGKTLP Trigger: GGGCAAGGTTTTGCCCTTCAACAGGCCCAGCATTTC...CCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 72 bp | GTTAGATGTGGCCCATCTGATCAGAGCAGATGTATATaGTGCAGCAAATTGGTCCAAGGCTTTGCATATTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRCGPSDQSRCI*CSKLVQGFAYW Trigger: CCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGGGCCACATCTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CCA 72 bp | CATCTGATCAGAGCAGATGTATATGCTGCAGCAAATTaGTCCAAGGCTTTGCATATTGGTATGGCAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLIRADVYAAAN*SKALHIGMAAA Trigger: AGCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR GCA 72 bp | AGATGTGGCCCATCTGATCAGAGCAGATGTATATGCTaGAGCAAATTGGTCCAAGGCTTTGCATATTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RCGPSDQSRCIC*SKLVQGFAYWY Trigger: ATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGGGCCACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR TCA 72 bp | CCTTCACTGTTGAATTTCTCTTCGACTGAAAGAAATTaGGACCATAGTGTTCTTAACCCCTCAGCCAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: PSLLNFSSTERN*DHSVLNPSAKP Trigger: GGGTTTGGCTGAGGGGTTAAGAACACTATGGTCTCAATTTCTTTCAGTCGAAGAGAAATTCAACAGTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGGCCCAAGGGAAGAGGCATGCAAGAGGCCAACTAGGAGAGACAGGCCAGGATGCACTCCTGCCTaGGGCAGTGCAGCCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEGPREEACKRPTRRDRPGCTPA*GSAAGQ Trigger: CTGGCCGGCTGCACTGCCCCAGGCAGGAGTGCATCC...TGGCCTGTCTCTCCTAGTTGGCCTCTTGCATGCCTCTTCCCTTGGGCCCTCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | TCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTTCGGGGGTAGGGGCTGCTaGGCTAAGGGCAGCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQRPQPIKPAQGCIPSFGGRGC*AKGSQP Trigger: GGGCTGGCTGCCCTTAGCCCAGCAGCCCCTACCCCC...GAAGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | TCTCTGTGTTGGGAGAAGCAGCCTGACCCCCTCAGCCAAAGCATGAGGGTAGCAAGGCTTGAGCGGGTTTaGGGGGCAGGGCTCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCWEKQPDPLSQSMRVARLERV*GAGLLR Trigger: TCGGAGGAGCCCTGCCCCTCAAACCCGCTCAAGCCT...TGCTACCCTCATGCTTTGGCTGAGGGGGTCAGGCTGCTTCTCCCAACACAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTGTGTTGGGAGAAGCAGCCTGACCCCCTCAGCCAAAGCATGAGGGTAGCAGGGCAGCCAGCCCACTaGTGCGGCCCTTGCAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCWEKQPDPLSQSMRVAGQPAH*CGPCKW Trigger: CCATTTGCAAGGGCCGCAGCAGTGGGCTGGCTGCCC...TGCTACCCTCATGCTTTGGCTGAGGGGGTCAGGCTGCTTCTCCCAACACAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | TCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTTCTCGAGAGCAGCAGGATaGGAACAGGCTCCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQRPQPIKPAQGCIPSFSRAAG*EQAPRP Trigger: GGGCCTGGGAGCCTGTTCTCATCCTGCTGCTCTCGA...GAAGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTGTGTTGGGAGAAGCAGCCTGACCCCCTCAGCCAAAGCATGAGGGTAGCAGGACCTTCCCCGGCCTaGTCAGCCTCCTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCWEKQPDPLSQSMRVAGPSPA*SASSSS Trigger: AGAAGATGAGGAGGCTGAGCAGGCCGGGGAAGGTCC...TGCTACCCTCATGCTTTGGCTGAGGGGGTCAGGCTGCTTCTCCCAACACAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTGCCTGCTGGAAGGGCTaGACCTTCCCCGGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVESIDPEGDPRGRRRQCACWKG*TFPGLL Trigger: GAGCAGGCCGGGGAAGGTCCAGCCCTTCCAGCAGGC...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTGCTGTCGCAGGGAGCTaGCTGCTGGAAGGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVESIDPEGDPRGRRRQCAVAGS*LLEGLD Trigger: GTCCAGCCCTTCCAGCAGGCAGCTCCCTGCGACAGC...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | GCCCATGATCTCACCACCCAGTCCAGCTCTTGCTGGATGTTAGTCTCTTATCTCGGAAGCGACAACGGCTaGGGGCTGCGAAGAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHDLTTQSSSCWMLVSYLGSDNG*GLRRAA Trigger: TGCGGCTCTTCGCAGCCCCCAGCCGTTGTCGCTTCC...GAGATAAGAGACTAACATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | ACCCTCTGGCTGGCTTCACTGCCTACAGAGACAAACTCTTCAAAGCACCCTTTTGGTGCGACCACCCAGTaGGACTGCTCCAAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLWLASLPTETNSSKHPFGATTQ*DCSKGL Trigger: GAGGCCCTTGGAGCAGTCTCACTGGGTGGTCGCACC...AAAAGGGTGCTTTGAAGAGTTTGTCTCTGTAGGCAGTGAAGCCAGCCAGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | GAAGTTCCTCATTCCCTACCTACGTTCCCACCAGGTGGGCCATTCCATGAAACTTCGCAGGGAGCTGCCTaGTGGAAGGGCTGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EVPHSLPTFPPGGPFHETSQGAA*WKGWTF Trigger: GAAGGTCCAGCCCTTCCAGCAGGCAGCTCCCTGCGA...AGTTTCATGGAATGGCCCACCTGGTGGGAACGTAGGTAGGGAATGAGGAACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | TCCATGAAACTCCATTGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCAGGTTTTGTCCGTCGCCACTaGCACTGTCCTCGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SMKLHCIVLVRRHREFPGFVRRH*HCPRGP Trigger: GGGGCCTCGAGGACAGTGGCAGTGGCGACGGACAAA...ACCTGGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTGGATGGCTCTGCGATTaGCCCTTCGAGAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVESIDPEGDPRGRRRQCGWLCD*PFESSR Trigger: CCTGCTGCTCTCGAAGGGTCAATCGCAGAGCCATCC...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 72 bp | ACGTTCCCACCAGGTGGGCCATTCCATGAAACTCCATaGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TFPPGGPFHETP*HSSCQAAQGVP Trigger: GGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGAATGGCCCACCTGGTGGGAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | GAAGTTCCTCATTCCCTACCTACGTTCCCACCAGGTGGGCCATTCCATGAAACTCATCAAAGGCCTGGATaGACTCCTGCCTGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVPHSLPTFPPGGPFHETHQRPG*TPAWGS Trigger: ACTGCCCCAGGCAGGAGTGCATCCAGGCCTTTGATG...AGTTTCATGGAATGGCCCACCTGGTGGGAACGTAGGTAGGGAATGAGGAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTCAGCAGGGATGCTTGTaGAGTTGGTCTTGCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVESIDPEGDPRGRRRQCQQGCL*SWSCSC Trigger: GCACGAGCAAGACCAACTTCACAAGCATCCCTGCTG...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | CATTCCCTACCTACGTTCCCACCAGGTGGGCCATTCCATGAAACTCCATTGCATACAGGGAAGAGATCTTaGCAGTCTCAGGGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLPTFPPGGPFHETPLHTGKRS*QSQGGG Trigger: GCCTCCTCCCTGAGACTGTCAAGATCTCTTCCCTGT...ATGCAATGGAGTTTCATGGAATGGCCCACCTGGTGGGAACGTAGGTAGGGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | AAGAATATGAAACCAGCCCATGATCTCACCACCCAGTCCAGCTCTTGCTGGATGTCCTCATCAAAGGCCTaGATGCACTCCTGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KNMKPAHDLTTQSSSCWMSSSKA*MHSCLG Trigger: CCCCAGGCAGGAGTGCATCCAGGCCTTTGATGAGGA...CATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGCTGGTTTCATATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTAGGTCAAGGCTGTCGTaGGGCTTGGCATTGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVESIDPEGDPRGRRRQCRSRLS*GLALRL Trigger: AAGCCTCAATGCCAAGCCCCACGACAGCCTTGACCT...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | CCATTCCATGAAACTCCATTGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCCTAGGGGAGGAAGGTTaGCTTTCATCTGGCGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PFHETPLHSSCQAAQGVPLGEEG*LSSGVL Trigger: CAACACGCCAGATGAAAGTCAACCTTCCTCCCCTAG...GGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | GAAGTTCCTCATTCCCTACCTACGTTCCCACCAGGTGGGCCATTCCATGAAACTTTCTGCCAGGCGCTCTaGGTTTTCCTTCTTACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVPHSLPTFPPGGPFHETFCQAL*VFLLTV Trigger: GACCGTAAGAAGGAAAACGCAGAGCGCCTGGCAGAA...AGTTTCATGGAATGGCCCACCTGGTGGGAACGTAGGTAGGGAATGAGGAACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | TCTGAGGGCCCAAGGGAAGAGGCATGCAAGAGGCCAACTAGGAGAGACAGGCCACCCAAAAATTTTGCCTaGAATGGTGCTAGGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEGPREEACKRPTRRDRPPKNFA*NGARYH Trigger: ATGGTACCTAGCACCATTGCAGGCAAAATTTTTGGG...TGGCCTGTCTCTCCTAGTTGGCCTCTTGCATGCCTCTTCCCTTGGGCCCTCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | TCTGAGGGCCCAAGGGAAGAGGCATGCAAGAGGCCAACTAGGAGAGACAGGCCACCATTTTGCTTATACTaGAGGAAGGCATTGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SEGPREEACKRPTRRDRPPFCLY*RKALVV Trigger: TACCACCAATGCCTTCCTGCAGTATAAGCAAAATGG...TGGCCTGTCTCTCCTAGTTGGCCTCTTGCATGCCTCTTCCCTTGGGCCCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | ACCCTCTGGCTGGCTTCACTGCCTACAGAGACAAACTCTTCAAAGCACCCTTTTGTCACCAACCAGCTCTaGGACCAAGCCATAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLWLASLPTETNSSKHPFVTNQL*DQAIEG Trigger: GCCTTCTATGGCTTGGTCCCAGAGCTGGTTGGTGAC...AAAAGGGTGCTTTGAAGAGTTTGTCTCTGTAGGCAGTGAAGCCAGCCAGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | GCCCATGATCTCACCACCCAGTCCAGCTCTTGCTGGATGTTAGTCTCTTATCTCGACGTTGGCAATGACTaGCACAGCTATGAAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHDLTTQSSSCWMLVSYLDVGND*HSYEEA Trigger: GGCTTCTTCATAGCTGTGTCAGTCATTGCCAACGTC...GAGATAAGAGACTAACATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | CCATTCCATGAAACTCCATTGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCGGTGGTACCACTCTTTaGCAAACGGATTCTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFHETPLHSSCQAAQGVPGGTTL*QTDSCQ Trigger: CTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACC...GGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCCTCATTCCCTACCTACGTTCCCACCAGGTGGGCCATTCCATGAAACTGCAGGAAGGCATTGGTaGTACCACTCTTTGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVPHSLPTFPPGGPFHETAGRHW*YHSLPN Trigger: GTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGC...AGTTTCATGGAATGGCCCACCTGGTGGGAACGTAGGTAGGGAATGAGGAACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | CCATTCCATGAAACTCCATTGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCACTGCAGGAAGGCATTaGTGGTACCACTCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFHETPLHSSCQAAQGVPTAGRH*WYHSLP Trigger: TGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGT...GGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 72 bp | CTGTTGAAGGGCAAAACCTTGCCCCTCGAGGCTAAATaGGAGATGAGGGTTCTCTTCCCTGAACTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLKGKTLPLEAK*EMRVLFPELPN Trigger: GTTTGGGAGTTCAGGGAAGAGAACCCTCATCTCCAATTTAGCCTCGAGGGGCAAGGTTTTGCCCTTCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | GTTCTCTTCCCTGAACTCCCAAACTTGCACAACACAACCAAAGAGAAGAGGAACAGCCTCCTCATCTTCTaGCAGGCGCTCTGCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLFPELPNLHNTTKEKRNSLLIF*QALCVF Trigger: GAAAACGCAGAGCGCCTGGCAGAAGATGAGGAGGCT...GTTCCTCTTCTCTTTGGTTGTGTTGTGCAAGTTTGGGAGTTCAGGGAAGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | TCCATGAAACTCCATTGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCAGGTAGTTGGTCTTGCTCGTaGCCTTCTCAGCATAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SMKLHCIVLVRRHREFPGSWSCS*PSQHRT Trigger: TGTTCTATGCTGAGAAGGGCACGAGCAAGACCAACT...ACCTGGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CCA 90 bp | GCCCATGATCTCACCACCCAGTCCAGCTCTTGCTGGATGTTAGTCTCTTATCTCGTGCCGGAACATGTCTaGGTCACGATCAAAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AHDLTTQSSSCWMLVSYLVPEHV*VTIKEV Trigger: TACTTCTTTGATCGTGACCCAGACATGTTCCGGCAC...GAGATAAGAGACTAACATCCAGCAAGAGCTGGACTGGGTGGTGAGATCATGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | GTTAGATGTGGCCCATCTGATCAGAGCAGATGTATATGCTGCAGCAAATTGGTCATTCCTTCTCCGAGCTaGCCAGCAATGTGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRCGPSDQSRCICCSKLVIPSPS*PAMCLG Trigger: ACCCAGACACATTGCTGGGCAGCTCGGAGAAGGAAT...GACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGGGCCACATCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCATGGGCTTAAGTTGCTCCTCAAAGTAACTCCATGGTGCTCTAAATCTAGTGTGTCTAGCTCCTaGATGCTGCCACGGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RKHGLKLLLKVTPWCSKSSVSSS*MLPRLT Trigger: TGTCAGCCGTGGCAGCATGCAGGAGCTAGACACACT...AGATTTAGAGCACCATGGAGTTACTTTGAGGAGCAACTTAAGCCCATGCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR TCA 90 bp | GTTAGATGTGGCCCATCTGATCAGAGCAGATGTATATGCTGCAGCAAATTGGTCCAAGACACCGCTAAGTaGGCAGATGGACCCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VRCGPSDQSRCICCSKLVQDTAK*ADGPKN Trigger: ATTTTTGGGTCCATCTGCTCACTTAGCGGTGTCTTG...GACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGGGCCACATCTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCATGGGCTTAAGTTGCTCCTCAAAGTAACTCCATGGTGCTCTAAATCTTCGAGGCCCCCATTTTaGTTATACTGCAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKHGLKLLLKVTPWCSKSSRPPF*LYCRKA Trigger: TGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGA...AGATTTAGAGCACCATGGAGTTACTTTGAGGAGCAACTTAAGCCCATGCTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 72 bp | CCATCTGATCAGAGCAGATGTATATGCTGCAGCAAATaGGTCCAAGGCTTTGCATATTGGTATGGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSDQSRCICCSK*VQGFAYWYGSS Trigger: GCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATCAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| 3UTR CAA 72 bp | TATATGCTGCAGCAAATTGGTCCAAGGCTTTGCATATaGGTATGGCAGCAGCTGCTATTGCTAGAGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YMLQQIGPRLCI*VWQQLLLLEFA Trigger: AGCAAACTCTAGCAATAGCAGCTGCTGCCATACCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS TCA 90 bp | CCCGGCTGTCACAGTTCAGGTCAAGGCTGTCGTGGGGCTTGGCATTaGGGCTTGAGCGGGTTTGAGGGGCAGGGCTCCTCCGAAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCHSSGQGCRGAWH*GLSGFEGQGSSEDL Trigger: CAGGTCTTCGGAGGAGCCCTGCCCCTCAAACCCGCTCAAGCCTCAATGCCAAGCCCCACGACAGCCTTGACCTGAACTGTGACAGCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS TCA 90 bp | AGGTCAAGGCTGTCGTGGGGCTTGGCATTGAGGCTTGAGCGGGTTTaGGGGGCAGGGCTCCTCCGAAGACCTGCTAGTGTGTCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSRLSWGLALRLERV*GAGLLRRPASVSSS Trigger: GGAGCTAGACACACTAGCAGGTCTTCGGAGGAGCCCTGCCCCTCAAACCCGCTCAAGCCTCAATGCCAAGCCCCACGACAGCCTTGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 90 bp | CTTCGAGAGCAGCAGGATGAGAACAGGCTCCCAGGCCCCATTGGTTaGGATGATACTGAGGTACTGCGGCTGGTGCGACCACCCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LREQQDENRLPGPIG*DDTEVLRLVRPPSE Trigger: CTCACTGGGTGGTCGCACCAGCCGCAGTACCTCAGTATCATCCCAACCAATGGGGCCTGGGAGCCTGTTCTCATCCTGCTGCTCTCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 90 bp | TGTAGGGAAGCGGTCACCACACGACTGCTCTTTGGAGGGCCATCGTaGGGTACCACGACATGGGATGGTCTCCACGACGTTGGCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: CREAVTTRLLFGGPS*GTTTWDGLHDVGND Trigger: GTCATTGCCAACGTCGTGGAGACCATCCCATGTCGTGGTACCCCACGATGGCCCTCCAAAGAGCAGTCGTGTGGTGACCGCTTCCCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | TCCATGAAACTCCATTGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCAGGTTGCTGTGCCCGGCGCTaGTCAGCACGCTGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SMKLHCIVLVRRHREFPGCCARR*SARWFW Trigger: CCAGAACCAGCGTGCTGACAAGCGCCGGGCACAGCA...ACCTGGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 90 bp | GTGTCCATACAGAAAAAGGCTGTAGGGAAGCGGTCACCACACGACTaGTCTTTGGAGGGCCATCGTGGGGTACCACGACATGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSIQKKAVGKRSPHD*SLEGHRGVPRHGMV Trigger: GACCATCCCATGTCGTGGTACCCCACGATGGCCCTCCAAAGAGCAGTCGTGTGGTGACCGCTTCCCTACAGCCTTTTTCTGTATGGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | TCCATGAAACTCCATTGCATAGTTCTTGTCAGGCGGCACAGGGAGTTCCCAGGTAGGCTGTCGTGGGGCTaGGCATTGAGGCTTGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SMKLHCIVLVRRHREFPGRLSWG*ALRLER Trigger: CCGCTCAAGCCTCAATGCCAAGCCCCACGACAGCCT...ACCTGGGAACTCCCTGTGCCGCCTGACAAGAACTATGCAATGGAGTTTCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | GAAGTTCCTCATTCCCTACCTACGTTCCCACCAGGTGGGCCATTCCATGAAACTCCACTGCTGCGGCCCTaGCAAATGGTAGCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVPHSLPTFPPGGPFHETPLLRP*QMVAMW Trigger: CCACATGGCTACCATTTGCAAGGGCCGCAGCAGTGG...AGTTTCATGGAATGGCCCACCTGGTGGGAACGTAGGTAGGGAATGAGGAACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | TCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTTCCTCGAGGCCCCCATTTaGCTTATACTGCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLQRPQPIKPAQGCIPSFLEAPI*LILQEG Trigger: GCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAG...GAAGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | TCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTTCCACAGGGAAGAGATCTaGACAGTCTCAGGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQRPQPIKPAQGCIPSFHREEI*TVSGRR Trigger: CCTCCTCCCTGAGACTGTCAAGATCTCTTCCCTGTG...GAAGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 90 bp | CCCATTTTGCTTATACTGCAGGAAGGCATTGGTGGTACCACTCTTTaGCAAACGGATTCTTGCCAGGCGCACTTTCTGCTGTGCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PILLILQEGIGGTTL*QTDSCQAHFLLCPA Trigger: CGCCGGGCACAGCAGAAAGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 90 bp | CCGTCGCCACTGCCACTGTCCTCGAGGCCCCCATTTTGCTTATACTaGAGGAAGGCATTGGTGGTACCACTCTTTGCCAAACGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSPLPLSSRPPFCLY*RKALVVPLFAKRIL Trigger: AAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACAGTGGCAGTGGCGACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | TCACTACAGAGGCCACAGCCCATTAAGCCAGCCCAGGGTTGCATTCCAAGCTTCTACTGCAGGAAGGCATaGGTGGTACCACTCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLQRPQPIKPAQGCIPSFYCRKA*VVPLFA Trigger: GGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTA...GAAGCTTGGAATGCAACCCTGGGCTGGCTTAATGGGCTGTGGCCTCTGTAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | TCAGTCGAGAGCATAGATCCAGAAGGTGACCCAAGAGGGAGGAGAAGACAGTGTACAGAGGCAGTAGAGTaGGCAAGGCGGATGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVESIDPEGDPRGRRRQCTEAVE*ARRMAL Trigger: CAGAGCCATCCGCCTTGCCAACTCTACTGCCTCTGT...ACACTGTCTTCTCCTCCCTCTTGGGTCACCTTCTGGATCTATGCTCTCGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 90 bp | AGCATTTGTCCGTCGCCACTGCCACTGTCCTCGAGGCCCCCATTTTaGTTATACTGCAGGAAGGCATTGGTGGTACCACTCTTTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SICPSPLPLSSRPPF*LYCRKALVVPLFAK Trigger: TTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACAGTGGCAGTGGCGACGGACAAATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 90 bp | CACTGTCCTCGAGGCCCCCATTTTGCTTATACTGCAGGAAGGCATTaGTGGTACCACTCTTTGCCAAACGGATTCTTGCCAGGCGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: HCPRGPHFAYTAGRH*WYHSLPNGFLPGAL Trigger: AAGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 90 bp | TGTCCTCGAGGCCCCCATTTTGCTTATACTGCAGGAAGGCATTGGTaGTACCACTCTTTGCCAAACGGATTCTTGCCAGGCGCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPRGPHFAYTAGRHW*YHSLPNGFLPGALS Trigger: AGAAAGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | CTTAGGACCCTCTGGCTGGCTTCACTGCCTACAGAGACAAACTCTTCAAAGCACCTTGTGAAGTTGGTCTaGCTCGTGCCCTTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRTLWLASLPTETNSSKHLVKLV*LVPFSA Trigger: TGCTGAGAAGGGCACGAGCAAGACCAACTTCACAAG...GTGCTTTGAAGAGTTTGTCTCTGTAGGCAGTGAAGCCAGCCAGAGGGTCCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | TCTCTGTGTTGGGAGAAGCAGCCTGACCCCCTCAGCCAAAGCATGAGGGTAGCAATGGACCCAAAAATTTaGCCTGCAATGGTGCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLCWEKQPDPLSQSMRVAMDPKI*PAMVLG Trigger: ACCTAGCACCATTGCAGGCAAAATTTTTGGGTCCAT...TGCTACCCTCATGCTTTGGCTGAGGGGGTCAGGCTGCTTCTCCCAACACAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | CTTAGGACCCTCTGGCTGGCTTCACTGCCTACAGAGACAAACTCTTCAAAGCACTTGCCAAACGGATTCTaGCCAGGCGCACTTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRTLWLASLPTETNSSKHLPNGF*PGALSA Trigger: AGCAGAAAGTGCGCCTGGCAAGAATCCGTTTGGCAA...GTGCTTTGAAGAGTTTGTCTCTGTAGGCAGTGAAGCCAGCCAGAGGGTCCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | CTTAGGACCCTCTGGCTGGCTTCACTGCCTACAGAGACAAACTCTTCAAAGCACTGGTGGTACCACTCTTaGCCAAACGGATTCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRTLWLASLPTETNSSKHWWYHS*PNGFLP Trigger: TGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCA...GTGCTTTGAAGAGTTTGTCTCTGTAGGCAGTGAAGCCAGCCAGAGGGTCCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | GATCAGAGCAGATGTATATGCTGCAGCAAATTGGTCCAAGGCTTTGCATATTGGATGGTCTCCACGACGTaGGCAATGACTGACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DQSRCICCSKLVQGFAYWMVSTT*AMTDTA Trigger: AGCTGTGTCAGTCATTGCCAACGTCGTGGAGACCAT...CCAATATGCAAAGCCTTGGACCAATTTGCTGCAGCATATACATCTGCTCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTTCCCTGAACTCCCAAACTTGCACAACACAACCAAAGAGAAGAGGAACACTAGGGGAGGAAGGTaGACTTTCATCTGGCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLFPELPNLHNTTKEKRNTRGGR*TFIWRV Trigger: AACACGCCAGATGAAAGTCAACCTTCCTCCCCTAGT...GTTCCTCTTCTCTTTGGTTGTGTTGTGCAAGTTTGGGAGTTCAGGGAAGAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | GAGCTGCCTGCTGGAAGGGCTGGACCTTCCCCGGCCTaGTCAGCCTCCTCATCTTCTGCCAGGCGCTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: ELPAGRAGPSPA*SASSSSARRSA Trigger: CGCAGAGCGCCTGGCAGAAGATGAGGAGGCTGAGCAGGCCGGGGAAGGTCCAGCCCTTCCAGCAGGCAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | AAAGGCCCTCCAGAGTCGCTGTCGCAGGGAGCTGCCTaGTGGAAGGGCTGGACCTTCCCCGGCCTGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KGPPESLSQGAA*WKGWTFPGLLS Trigger: GCTGAGCAGGCCGGGGAAGGTCCAGCCCTTCCAGCAGGCAGCTCCCTGCGACAGCGACTCTGGAGGGCCTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS TCA 72 bp | CAGGTCAAGGCTGTCGTGGGGCTTGGCATTGAGGCTTaGGCGGGTTTGAGGGGCAGGGCTCCTCCGAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: QVKAVVGLGIEA*AGLRGRAPPKT Trigger: GGTCTTCGGAGGAGCCCTGCCCCTCAAACCCGCTCAAGCCTCAATGCCAAGCCCCACGACAGCCTTGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS TCA 72 bp | CAGGGAGGAGGCACGGAGTACCCAAGCTGGAGTTCCTaGGAGTGGTGTTGGGTGTGCCACCACTGCCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QGGGTEYPSWSS*EWCWVCHHCRH Trigger: GTGGCGGCAGTGGTGGCACACCCAACACCACTCTCAGGAACTCCAGCTTGGGTACTCCGTGCCTCCTCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 90 bp | GGGAGGAGGCACGGAGTACCCAAGCTGGAGTTCCTGAGAGTGGTGTaGGGTGTGCCACCACTGCCGCCACCACCACTAGGGGAGGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRRHGVPKLEFLRVV*GVPPLPPPPLGEEG Trigger: ACCTTCCTCCCCTAGTGGTGGTGGCGGCAGTGGTGGCACACCCAACACCACTCTCAGGAACTCCAGCTTGGGTACTCCGTGCCTCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 90 bp | CGGCTGACAGAGGCAGTAGAGTTGGCAAGGCGGATGGCTCTGCGATaGACCCTTCGAGAGCAGCAGGATGAGAACAGGCTCCCAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLTEAVELARRMALR*TLREQQDENRLPGP Trigger: GGGGCCTGGGAGCCTGTTCTCATCCTGCTGCTCTCGAAGGGTCAATCGCAGAGCCATCCGCCTTGCCAACTCTACTGCCTCTGTCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS TCA 72 bp | CTGTCGTGGGGCTTGGCATTGAGGCTTGAGCGGGTTTaGGGGGCAGGGCTCCTCCGAAGACCTGCTAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSWGLALRLERV*GAGLLRRPASV Trigger: CACACTAGCAGGTCTTCGGAGGAGCCCTGCCCCTCAAACCCGCTCAAGCCTCAATGCCAAGCCCCACGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS TCA 72 bp | CACAGTTCAGGTCAAGGCTGTCGTGGGGCTTGGCATTaGGGCTTGAGCGGGTTTGAGGGGCAGGGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HSSGQGCRGAWH*GLSGFEGQGSS Trigger: GGAGGAGCCCTGCCCCTCAAACCCGCTCAAGCCTCAATGCCAAGCCCCACGACAGCCTTGACCTGAACTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 72 bp | CACGGAGTACCCAAGCTGGAGTTCCTGAGAGTGGTGTaGGGTGTGCCACCACTGCCGCCACCACCACTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HGVPKLEFLRVV*GVPPLPPPPLG Trigger: CCCTAGTGGTGGTGGCGGCAGTGGTGGCACACCCAACACCACTCTCAGGAACTCCAGCTTGGGTACTCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | GGATGCACTCCTGCCTGGGGCAGTGCAGCCGGCCAGTaGGATAAAAGTTCAGCACGTGCCGGAACATGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GCTPAWGSAAGQ*DKSSARAGTCL Trigger: CAGACATGTTCCGGCACGTGCTGAACTTTTATCGCACTGGCCGGCTGCACTGCCCCAGGCAGGAGTGCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 72 bp | GCGGTCACCACACGACTGCTCTTTGGAGGGCCATCGTaGGGTACCACGACATGGGATGGTCTCCACGACGTT | + |
|
Preference number: 6 (lower is better) Translates to: AVTTRLLFGGPS*GTTTWDGLHDV Trigger: AACGTCGTGGAGACCATCCCATGTCGTGGTACCCCACGATGGCCCTCCAAAGAGCAGTCGTGTGGTGACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 72 bp | GCCCCATTGGTTGGGATGATACTGAGGTACTGCGGCTaGTGCGACCACCCAGTGAGACTGCTCCAAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: APLVGMILRYCG*CDHPVRLLQGP Trigger: AGGCCCTTGGAGCAGTCTCACTGGGTGGTCGCACCAGCCGCAGTACCTCAGTATCATCCCAACCAATGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 90 bp | GTGTCTAGCTCCTGCATGCTGCCACGGCTGACAGAGGCAGTAGAGTaGGCAAGGCGGATGGCTCTGCGATTGACCCTTCGAGAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSSSCMLPRLTEAVE*ARRMALRLTLREQQ Trigger: CTGCTGCTCTCGAAGGGTCAATCGCAGAGCCATCCGCCTTGCCAACTCTACTGCCTCTGTCAGCCGTGGCAGCATGCAGGAGCTAGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | TGCCAAACGGATTCTTGCCAGGCGCACTTTCTGCTGTaGCCGGCGCTTGTCAGCACGCTGGTTCTGGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: CQTDSCQAHFLL*PALVSTLVLVV Trigger: TACCACCAGAACCAGCGTGCTGACAAGCGCCGGGCACAGCAGAAAGTGCGCCTGGCAAGAATCCGTTTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | CCATTGGTTGGGATGATACTGAGGTACTGCGGCTGGTaGGACCACCCAGTGAGACTGCTCCAAGGGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PLVGMILRYCGW*DHPVRLLQGPH Trigger: GTGAGGCCCTTGGAGCAGTCTCACTGGGTGGTCGCACCAGCCGCAGTACCTCAGTATCATCCCAACCAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 72 bp | CCAGCTCCTCATCAAAGGCCTGGATGCACTCCTGCCTaGGGCAGTGCAGCCGGCCAGTGCGATAAAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAPHQRPGCTPA*GSAAGQCDKSS Trigger: TGAACTTTTATCGCACTGGCCGGCTGCACTGCCCCAGGCAGGAGTGCATCCAGGCCTTTGATGAGGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 72 bp | CAGCAGGATGAGAACAGGCTCCCAGGCCCCATTGGTTaGGATGATACTGAGGTACTGCGGCTGGTGCGACCA | + |
|
Preference number: 6 (lower is better) Translates to: QQDENRLPGPIG*DDTEVLRLVRP Trigger: TGGTCGCACCAGCCGCAGTACCTCAGTATCATCCCAACCAATGGGGCCTGGGAGCCTGTTCTCATCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 72 bp | TTGTTCAAAAGCAGAGCGGCTCCTAACGCACAGCATTaGTCCGTCGCCACTGCCACTGTCCTCGAGGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LFKSRAAPNAQH*SVATATVLEAP Trigger: GGGGGCCTCGAGGACAGTGGCAGTGGCGACGGACAAATGCTGTGCGTTAGGAGCCGCTCTGCTTTTGAACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 72 bp | TCCTGCATGCTGCCACGGCTGACAGAGGCAGTAGAGTaGGCAAGGCGGATGGCTCTGCGATTGACCCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SCMLPRLTEAVE*ARRMALRLTLR Trigger: TCGAAGGGTCAATCGCAGAGCCATCCGCCTTGCCAACTCTACTGCCTCTGTCAGCCGTGGCAGCATGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | GGCATTGGTGGTACCACTCTTTGCCAAACGGATTCTTaGCAGGCGCACTTTCTGCTGTGCCCGGCGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GIGGTTLCQTDS*QAHFLLCPALV Trigger: GACAAGCGCCGGGCACAGCAGAAAGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | CCGTCGCCACTGCCACTGTCCTCGAGGCCCCCATTTTaGTTATACTGCAGGAAGGCATTGGTGGTACCACTC | + |
|
Preference number: 6 (lower is better) Translates to: PSPLPLSSRPPF*LYCRKALVVPL Trigger: GAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACAGTGGCAGTGGCGACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 72 bp | GAGGCAGTAGAGTTGGCAAGGCGGATGGCTCTGCGATaGACCCTTCGAGAGCAGCAGGATGAGAACAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EAVELARRMALR*TLREQQDENRL Trigger: GAGCCTGTTCTCATCCTGCTGCTCTCGAAGGGTCAATCGCAGAGCCATCCGCCTTGCCAACTCTACTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 90 bp | ATACAGAAAAAGGCTGTAGGGAAGCGGTCACCACACGACTGCTCTTaGGAGGGCCATCGTGGGGTACCACGACATGGGATGGTCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: IQKKAVGKRSPHDCS*EGHRGVPRHGMVST Trigger: CGTGGAGACCATCCCATGTCGTGGTACCCCACGATGGCCCTCCAAAGAGCAGTCGTGTGGTGACCGCTTCCCTACAGCCTTTTTCTGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | CAGAAAAAGGCTGTAGGGAAGCGGTCACCACACGACTaGTCTTTGGAGGGCCATCGTGGGGTACCACGACAT | + |
|
Preference number: 6 (lower is better) Translates to: QKKAVGKRSPHD*SLEGHRGVPRH Trigger: ATGTCGTGGTACCCCACGATGGCCCTCCAAAGAGCAGTCGTGTGGTGACCGCTTCCCTACAGCCTTTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 72 bp | AGGCATTGGTGGTACCACTCTTTGCCAAACGGATTCTaGCCAGGCGCACTTTCTGCTGTGCCCGGCGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RHWWYHSLPNGF*PGALSAVPGAC Trigger: ACAAGCGCCGGGCACAGCAGAAAGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 72 bp | TCCGTCGCCACTGCCACTGTCCTCGAGGCCCCCATTTaGCTTATACTGCAGGAAGGCATTGGTGGTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: SVATATVLEAPI*LILQEGIGGTT Trigger: AGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACAGTGGCAGTGGCGACGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 90 bp | CCCCATTTTGCTTATACTGCAGGAAGGCATTGGTGGTACCACTCTTaGCCAAACGGATTCTTGCCAGGCGCACTTTCTGCTGTGCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PHFAYTAGRHWWYHS*PNGFLPGALSAVPG Trigger: GCCGGGCACAGCAGAAAGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 90 bp | CCACTGTCCTCGAGGCCCCCATTTTGCTTATACTGCAGGAAGGCATaGGTGGTACCACTCTTTGCCAAACGGATTCTTGCCAGGCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PLSSRPPFCLYCRKA*VVPLFAKRILARRT Trigger: AGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 90 bp | CAGCATTTGTCCGTCGCCACTGCCACTGTCCTCGAGGCCCCCATTTaGCTTATACTGCAGGAAGGCATTGGTGGTACCACTCTTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QHLSVATATVLEAPI*LILQEGIGGTTLCQ Trigger: TTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACAGTGGCAGTGGCGACGGACAAATGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | CTGCCACTGTCCTCGAGGCCCCCATTTTGCTTATACTaGAGGAAGGCATTGGTGGTACCACTCTTTGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPLSSRPPFCLY*RKALVVPLFAK Trigger: TTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGAGGACAGTGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CCA 72 bp | GGCCCCCATTTTGCTTATACTGCAGGAAGGCATTGGTaGTACCACTCTTTGCCAAACGGATTCTTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPHFAYTAGRHW*YHSLPNGFLPG Trigger: GCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS TCA 72 bp | AGGGCCTCACTGAAAGTTAGCTCGTCTGTGAACTCGTaGCACGTAGTCTTCTCCAGACAATGCAGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RASLKVSSSVNS*HVVFSRQCSRW Trigger: CCATCTGCTGCATTGTCTGGAGAAGACTACGTGTCACGAGTTCACAGACGAGCTAACTTTCAGTGAGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS GCA 72 bp | CTTATACTGCAGGAAGGCATTGGTGGTACCACTCTTTaGCAAACGGATTCTTGCCAGGCGCACTTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LILQEGIGGTTL*QTDSCQAHFLL Trigger: CAGCAGAAAGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 72 bp | GCTTATACTGCAGGAAGGCATTGGTGGTACCACTCTTaGCCAAACGGATTCTTGCCAGGCGCACTTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AYTAGRHWWYHS*PNGFLPGALSA Trigger: AGCAGAAAGTGCGCCTGGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||
| CDS CAA 72 bp | TCGAGGCCCCCATTTTGCTTATACTGCAGGAAGGCATaGGTGGTACCACTCTTTGCCAAACGGATTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRPPFCLYCRKA*VVPLFAKRILA Trigger: GGCAAGAATCCGTTTGGCAAAGAGTGGTACCACCAATGCCTTCCTGCAGTATAAGCAAAATGGGGGCCTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009875.5 |
||