Pregenerated sensors for KCNC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027895Ensembl transcript IDs: ENSMUST00000009617.10, ENSMUST00000238670.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGGGTCACCCGGCCTCTGCTATTGCACGCATCCTCTGGCCACTaGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTCGCCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: EGVTRPLLLHASSGH*PGSTVLQLVSSRPR Trigger: CCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTGCAATAGCAGAGGCCGGGTGACCCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR GCA 90 bp | TGCTATTGCACGCATCCTCTGGCCACTGGCCAGGAAGTACAGTATTaGAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTTCTCAGACCCC | + |
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Preference number: 1 (lower is better) Translates to: CYCTHPLATGQEVQY*NWSPLARGVPFSDP Trigger: GGGGTCTGAGAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTGCAATAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR TCA 90 bp | TCTGTCTGTCTGTCTTTCTCACGTTGGCGCCACTCTAAGAGAGGGTaGGGACTTCAGCGTGGGCATAGTTGGACGAGAGGGCGTCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: SVCLSFSRWRHSKRG*GLQRGHSWTRGRLG Trigger: GCCAAGACGCCCTCTCGTCCAACTATGCCCACGCTGAAGTCCTCACCCTCTCTTAGAGTGGCGCCAACGTGAGAAAGACAGACAGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 90 bp | AGGGGCAGGTCCCAGGGACACATTTCCTGGGATATCCCATACACGTaGTCAGAAGAAACAATCCATGAAGGAAGGGAGGAGGGGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: RGRSQGHISWDIPYT*SEETIHEGREEGKQ Trigger: CTGTTTCCCCTCCTCCCTTCCTTCATGGATTGTTTCTTCTGACCACGTGTATGGGATATCCCAGGAAATGTGTCCCTGGGACCTGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 90 bp | CCAGCAAAAGATTCGTGCCTGGGTTCCAGAGTTTTCCTAAGCCTCTaGCTTTCTGTCTGTCTGTCTGTCTGTCTTTCTCACGTTGGCGCC | + |
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Preference number: 1 (lower is better) Translates to: PAKDSCLGSRVFLSL*LSVCLSVCLSHVGA Trigger: GGCGCCAACGTGAGAAAGACAGACAGACAGACAGACAGAAAGCCAGAGGCTTAGGAAAACTCTGGAACCCAGGCACGAATCTTTTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 90 bp | GAACAGAGTATCAGACCCAGATGGCTCTGGGCCCTGAGAGTCGCATaGGAGGTTTTTCCACCAGTCTTGTGCAAACAAGGATATCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: EQSIRPRWLWALRVA*EVFPPVLCKQGYLS Trigger: ACTCAGATATCCTTGTTTGCACAAGACTGGTGGAAAAACCTCCCATGCGACTCTCAGGGCCCAGAGCCATCTGGGTCTGATACTCTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR TCA 90 bp | TCGCATGGGAGGTTTTTCCACCAGTCTTGTGCAAACAAGGATATCTaGGTCTTTCCCAGCAAAAGATTCGTGCCTGGGTTCCAGAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: SHGRFFHQSCANKDI*VFPSKRFVPGFQSF Trigger: AAAACTCTGGAACCCAGGCACGAATCTTTTGCTGGGAAAGACTCAGATATCCTTGTTTGCACAAGACTGGTGGAAAAACCTCCCATGCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTCGCCCGAGGCTGGGACCACCCAGCTaGAGGGGCAGGTCCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SGHWPGSTVLQLVSSRPRLGPPS*RGRSQG Trigger: TCCCTGGGACCTGCCCCTCCAGCTGGGTGGTCCCAG...CCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR TCA 90 bp | CTCGAGCACAGCATGACAGTTGAGGGCATGCAGACAGGGCACAGTGGGCCCAGCGATGGCTCTGGGCCCTaGGAGTCGCATGGGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LEHSMTVEGMQTGHSGPSDGSGP*ESHGRF Trigger: AAACCTCCCATGCGACTCTCAGGGCCCAGAGCCATC...GCTGGGCCCACTGTGCCCTGTCTGCATGCCCTCAACTGTCATGCTGTGCTCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | TTGCAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTTCTCAGACCCCTGAGCCAGCAGCGTGGGCATAGTTaGACGAGAGGGCGTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LQLVSSRPRCPLLRPLSQQRGHS*TRGRLG Trigger: GCCAAGACGCCCTCTCGTCCAACTATGCCCACGCTG...CTGGCTCAGGGGTCTGAGAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | AGCATGACAGTTGAGGGCATGCAGACAGGGCACAGTGGGCCCAGCCTAGGCGTGGGAGGGGAAACAGGGTaGGAAGAGGACTTGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SMTVEGMQTGHSGPSLGVGGETG*EEDLGD Trigger: GTCTCCCAAGTCCTCTTCCCACCCTGTTTCCCCTCC...CACGCCTAGGCTGGGCCCACTGTGCCCTGTCTGCATGCCCTCAACTGTCATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCCTGAGCCAGATGGGCAAACAGATCCCCTTCCATCTGCCCAGCAGCATCTTCAAGTGAGAGCAGCCTaGGACCACCCAGCTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TPEPDGQTDPLPSAQQHLQVRAA*DHPAGG Trigger: CCCTCCAGCTGGGTGGTCCCAGGCTGCTCTCACTTG...AAGATGCTGCTGGGCAGATGGAAGGGGATCTGTTTGCCCATCTGGCTCAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CAA 90 bp | CTGCTATTGCACGCATCCTCTGGCCACTGGCCAGGAAGTACAGTATaGCAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTTCTCAGACCC | + |
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Preference number: 2 (lower is better) Translates to: LLLHASSGHWPGSTV*QLVSSRPRCPLLRP Trigger: GGGTCTGAGAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTGCAATAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | ATTGCAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTTCTCAGACCCCTGAGCCAAAATGCCCCACAAACTaGGGTGTGGGGTGGGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: IATGLLSPEVSPSQTPEPKCPTN*GVGWEV Trigger: TACCTCCCACCCCACACCCCAGTTTGTGGGGCATTT...TGGCTCAGGGGTCTGAGAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR GCA 90 bp | CACGCATCCTCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTCTTCAACAGGCCACCTaGTGGCAGGGGAAACATCCC | + |
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Preference number: 2 (lower is better) Translates to: HASSGHWPGSTVLQLVSSLQQAT*WQGKHP Trigger: GGGATGTTTCCCCTGCCAGCAGGTGGCCTGTTGAAG...AGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGACCCCTGAGCCAGATGGGCAAACAGATCCCCTTCCATCTGCCCAGCAGAATCTTGCCTTCAACTaGCTTCAACAGGCCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: SQTPEPDGQTDPLPSAQQNLAFN*LQQATC Trigger: GCAGGTGGCCTGTTGAAGTCAGTTGAAGGCAAGATT...CTGCTGGGCAGATGGAAGGGGATCTGTTTGCCCATCTGGCTCAGGGGTCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR TCA 90 bp | TTGCAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTTCTCAGACCCCTGAGCCAGGACACACAAAAGAAATaGAATTCCCCCTATCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LQLVSSRPRCPLLRPLSQDTQKK*NSPYHR Trigger: TCTGTGATAGGGGGAATTTCATTTCTTTTGTGTGTC...CTGGCTCAGGGGTCTGAGAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CAA 90 bp | TGGCTCTGGGCCCTGAGAGTCGCATGGGAGGTTTTTCCACCAGTCTaGTGCAAACAAGGATATCTGAGTCTTTCCCAGCAAAAGATTCGT | + |
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Preference number: 2 (lower is better) Translates to: WLWALRVAWEVFPPV*CKQGYLSLSQQKIR Trigger: ACGAATCTTTTGCTGGGAAAGACTCAGATATCCTTGTTTGCACAAGACTGGTGGAAAAACCTCCCATGCGACTCTCAGGGCCCAGAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR TCA 90 bp | CGCATGGGAGGTTTTTCCACCAGTCTTGTGCAAACAAGGATATCTGAGTCTTTCCACTCTAAGAGAGGGTaGGGACTTCAGCGTGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: RMGGFSTSLVQTRISESFHSKRG*GLQRGH Trigger: ATGCCCACGCTGAAGTCCTCACCCTCTCTTAGAGTG...GAAAGACTCAGATATCCTTGTTTGCACAAGACTGGTGGAAAAACCTCCCATGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | TGGGATATCCCATACACGTGGTCAGAAGAAACAATCCATGAAGGAAGGGAGGAGCTGTCTTTCTCACGTTaGCGCCACTCTAAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: WDIPYTWSEETIHEGREELSFSR*RHSKRG Trigger: CCCTCTCTTAGAGTGGCGCCAACGTGAGAAAGACAG...CTCCTCCCTTCCTTCATGGATTGTTTCTTCTGACCACGTGTATGGGATATCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGGAGCAGCAGGACACTCGGATGTCTTTATTGGTACTCGAGCACAGCATGACCACCAGTAGCACGTaGACTACACACAAGAGTATA | + |
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Preference number: 2 (lower is better) Translates to: SEEQQDTRMSLLVLEHSMTTSST*TTHKSI Trigger: TATACTCTTGTGTGTAGTGCACGTGCTACTGGTGGT...CATGCTGTGCTCGAGTACCAATAAAGACATCCGAGTGTCCTGCTGCTCCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | GGCAAACAGATCCCCTTCCATCTGCCCAGCAGCATCTTTGAAAAGAAATGGACACAGGGACACATTTCCTaGGATATCCCATACACGTGG | + |
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Preference number: 2 (lower is better) Translates to: GKQIPFHLPSSIFEKKWTQGHIS*DIPYTW Trigger: CCACGTGTATGGGATATCCCAGGAAATGTGTCCCTG...TGTCCATTTCTTTTCAAAGATGCTGCTGGGCAGATGGAAGGGGATCTGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR GCA 90 bp | GGCAAACAGATCCCCTTCCATCTGCCCAGCAGCATCTTTGAAAAGAAATGGACACCAGCAAAAGATTCGTaGCTGGGTTCCAGAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GKQIPFHLPSSIFEKKWTPAKDS*LGSRVF Trigger: GAAAACTCTGGAACCCAGGCACGAATCTTTTGCTGG...TGTCCATTTCTTTTCAAAGATGCTGCTGGGCAGATGGAAGGGGATCTGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGGACACATTTCCTGGGATATCCCATACACGTGGTCAGAAGAAACAATCCGTTTTCCTAAGCCTCTaGCTTTCTGTCTGTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PRDTFPGISHTRGQKKQSVFLSL*LSVCLS Trigger: AGACAGACAGACAGAAAGCCAGAGGCTTAGGAAAAC...GGATTGTTTCTTCTGACCACGTGTATGGGATATCCCAGGAAATGTGTCCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CCA 90 bp | GGCAAACAGATCCCCTTCCATCTGCCCAGCAGCATCTTTGAAAAGAAATGGACAGATATCCCATACACGTaGTCAGAAGAAACAATCCAT | + |
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Preference number: 2 (lower is better) Translates to: GKQIPFHLPSSIFEKKWTDIPYT*SEETIH Trigger: ATGGATTGTTTCTTCTGACCACGTGTATGGGATATC...TGTCCATTTCTTTTCAAAGATGCTGCTGGGCAGATGGAAGGGGATCTGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR GCA 72 bp | ACGCATCCTCTGGCCACTGGCCAGGAAGTACAGTATTaGAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: THPLATGQEVQY*NWSPLARGVPF Trigger: GAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 72 bp | CCTCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTaGTCTCCTCTCGCCCGAGGTGTCCCCTTCTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: PLATGQEVQYCN*SPLARGVPFSD Trigger: GTCTGAGAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 72 bp | AGGGGTCACCCGGCCTCTGCTATTGCACGCATCCTCTaGCCACTGGCCAGGAAGTACAGTATTGCAACTGGT | + |
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Preference number: 3 (lower is better) Translates to: RGHPASAIARIL*PLARKYSIATG Trigger: ACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTGCAATAGCAGAGGCCGGGTGACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR TCA 72 bp | CTGTCTTTCTCACGTTGGCGCCACTCTAAGAGAGGGTaGGGACTTCAGCGTGGGCATAGTTGGACGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LSFSRWRHSKRG*GLQRGHSWTRG Trigger: CCCTCTCGTCCAACTATGCCCACGCTGAAGTCCTCACCCTCTCTTAGAGTGGCGCCAACGTGAGAAAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR TCA 72 bp | GAAGCAGTGACCCCGGAGGGCAATCTTGCCTTCAACTaGCTTCAACAGGCCACCTGCTGGCAGGGGAAACAT | + |
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Preference number: 3 (lower is better) Translates to: EAVTPEGNLAFN*LQQATCWQGKH Trigger: ATGTTTCCCCTGCCAGCAGGTGGCCTGTTGAAGTCAGTTGAAGGCAAGATTGCCCTCCGGGGTCACTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 72 bp | ACCCGGCCTCTGCTATTGCACGCATCCTCTGGCCACTaGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: TRPLLLHASSGH*PGSTVLQLVSS Trigger: AGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTGCAATAGCAGAGGCCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 72 bp | ATCAGACCCAGATGGCTCTGGGCCCTGAGAGTCGCATaGGAGGTTTTTCCACCAGTCTTGTGCAAACAAGGA | + |
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Preference number: 3 (lower is better) Translates to: IRPRWLWALRVA*EVFPPVLCKQG Trigger: TCCTTGTTTGCACAAGACTGGTGGAAAAACCTCCCATGCGACTCTCAGGGCCCAGAGCCATCTGGGTCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR-3UTR CAA 90 bp | TCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTCGCCCGAGGGTTTTTCCACCAGTCTaGTGCAAACAAGGATATCTG | + |
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Preference number: 3 (lower is better) Translates to: SGHWPGSTVLQLVSSRPRVFPPV*CKQGYL Trigger: CAGATATCCTTGTTTGCACAAGACTGGTGGAAAAAC...CCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 72 bp | GATTCGTGCCTGGGTTCCAGAGTTTTCCTAAGCCTCTaGCTTTCTGTCTGTCTGTCTGTCTGTCTTTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: DSCLGSRVFLSL*LSVCLSVCLSH Trigger: GTGAGAAAGACAGACAGACAGACAGACAGAAAGCCAGAGGCTTAGGAAAACTCTGGAACCCAGGCACGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CCA 72 bp | TCCCAGGGACACATTTCCTGGGATATCCCATACACGTaGTCAGAAGAAACAATCCATGAAGGAAGGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SQGHISWDIPYT*SEETIHEGREE Trigger: CTCCTCCCTTCCTTCATGGATTGTTTCTTCTGACCACGTGTATGGGATATCCCAGGAAATGTGTCCCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR GCA 72 bp | ACAAGGATATCTGAGTCTTTCCCAGCAAAAGATTCGTaGCTGGGTTCCAGAGTTTTCCTAAGCCTCTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: TRISESFPAKDS*LGSRVFLSLWL Trigger: AAGCCAGAGGCTTAGGAAAACTCTGGAACCCAGGCACGAATCTTTTGCTGGGAAAGACTCAGATATCCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR TCA 72 bp | AGGTTTTTCCACCAGTCTTGTGCAAACAAGGATATCTaGGTCTTTCCCAGCAAAAGATTCGTGCCTGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: RFFHQSCANKDI*VFPSKRFVPGF Trigger: GAACCCAGGCACGAATCTTTTGCTGGGAAAGACTCAGATATCCTTGTTTGCACAAGACTGGTGGAAAAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR GCA 90 bp | GCCACTCTAAGAGAGGGTGAGGACTTCAGCGTGGGCATAGTTGGACGAGAGGGCGCTGCCGCTGCTGCCTaGACCGCCGCCATCCGACTC | + |
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Preference number: 4 (lower is better) Translates to: ATLREGEDFSVGIVGREGAAAAA*TAAIRL Trigger: GAGTCGGATGGCGGCGGTGCAGGCAGCAGCGGCAGC...GCCCTCTCGTCCAACTATGCCCACGCTGAAGTCCTCACCCTCTCTTAGAGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR GCA 90 bp | CACGCATCCTCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTACCAGGCAAGGCGGGTaGCCGGTAGGGTGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HASSGHWPGSTVLQLVSSTRQGG*PVGCAG Trigger: CCCTGCGCACCCTACCGGGCACCCGCCTTGCCTGGT...AGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR TCA 90 bp | TCTCAGACCCCTGAGCCAGATGGGCAAACAGATCCCCTTCCATCTGCCCAGCAGAGGCCAAGGGCTGAGTaGGGCCAGCTCCCTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SQTPEPDGQTDPLPSAQQRPRAE*GQLPPH Trigger: ATGAGGAGGGAGCTGGCCTCACTCAGCCCTTGGCCT...CTGCTGGGCAGATGGAAGGGGATCTGTTTGCCCATCTGGCTCAGGGGTCTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR GCA 90 bp | TCTCAGACCCCTGAGCCAGATGGGCAAACAGATCCCCTTCCATCTGCCCAGCAGAGTCGGTGTGGTCGTTaGCCCGTGGGTCAGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SQTPEPDGQTDPLPSAQQSRCGR*PVGQMA Trigger: GGCCATCTGACCCACGGGGCAACGACCACACCGACT...CTGCTGGGCAGATGGAAGGGGATCTGTTTGCCCATCTGGCTCAGGGGTCTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CCA 90 bp | TCTCAGACCCCTGAGCCAGATGGGCAAACAGATCCCCTTCCATCTGCCCAGCAGCCGACGCCTCGCCCTTaGCCATCTCCTCCTTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SQTPEPDGQTDPLPSAQQPTPRP*PSPPSD Trigger: GTCTGAAGGAGGAGATGGCCAAGGGCGAGGCGTCGG...CTGCTGGGCAGATGGAAGGGGATCTGTTTGCCCATCTGGCTCAGGGGTCTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CCA 90 bp | TTGCCTTCAACTGACTTCAACAGGCCACCTGCTGGCAGGGGAAACATCCCCAAGGTGGTCGTTGCCCCGTaGGTCAGATGGCCTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LPSTDFNRPPAGRGNIPKVVVAP*VRWPGP Trigger: GGGGCCAGGCCATCTGACCCACGGGGCAACGACCAC...CTTGGGGATGTTTCCCCTGCCAGCAGGTGGCCTGTTGAAGTCAGTTGAAGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CCA 90 bp | CACGCATCCTCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTGCCCCGTGGGTCAGATaGCCTGGCCCCAATTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: HASSGHWPGSTVLQLVSSAPWVR*PGPNSL Trigger: GAGCGAATTGGGGCCAGGCCATCTGACCCACGGGGC...AGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| 3UTR CAA 72 bp | CACGCATCCTCTGGCCACTGGCCAGGAAGTACAGTATaGCAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: HASSGHWPGSTV*QLVSSRPRCPL Trigger: AAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR GCA 90 bp | CCCAGGGACACATTTCCTGGGATATCCCATACACGTGGTCAGAAGAAACAATCCGGGTGCCCGGTAGGGTaGGCAGGGTGCTGCGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PRDTFPGISHTRGQKKQSGCPVG*AGCCGR Trigger: CCTACCGCAGCACCCTGCGCACCCTACCGGGCACCC...GGATTGTTTCTTCTGACCACGTGTATGGGATATCCCAGGAAATGTGTCCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR GCA 90 bp | TTGCCTTCAACTGACTTCAACAGGCCACCTGCTGGCAGGGGAAACATCCCCAAGTGTTTCTGTCCCGCGTaGCTGAGCGTCTCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LPSTDFNRPPAGRGNIPKCFCPA*LSVSGP Trigger: GGGCCCTGAGACGCTCAGGCACGCGGGACAGAAACA...CTTGGGGATGTTTCCCCTGCCAGCAGGTGGCCTGTTGAAGTCAGTTGAAGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CCA 90 bp | TCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTCGCCCGAGGACAGGTGTGAGACACTaGGACGCACGCTTTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGHWPGSTVLQLVSSRPRTGVRH*DARFRL Trigger: GAGCCGAAAGCGTGCGTCCCAGTGTCTCACACCTGT...CCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CCA 90 bp | TCTCAGACCCCTGAGCCAGATGGGCAAACAGATCCCCTTCCATCTGCCCAGCAGTTCTTGAAGTCGGTGTaGTCGTTGCCCCGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQTPEPDGQTDPLPSAQQFLKSV*SLPRGS Trigger: TGACCCACGGGGCAACGACCACACCGACTTCAAGAA...CTGCTGGGCAGATGGAAGGGGATCTGTTTGCCCATCTGGCTCAGGGGTCTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR TCA 90 bp | CTCGAGCACAGCATGACAGTTGAGGGCATGCAGACAGGGCACAGTGGGCCCAGCCCGTACGGTAGTAGTTaGGCACATAGGCAAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LEHSMTVEGMQTGHSGPSPYGSS*AHRQKH Trigger: GTGTTTTTGCCTATGTGCTCAACTACTACCGTACGG...GCTGGGCCCACTGTGCCCTGTCTGCATGCCCTCAACTGTCATGCTGTGCTCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR TCA 90 bp | TCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTCGCCCGAGGCGTTTCGGTCAATGTTaGAGGCCTCATGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGHWPGSTVLQLVSSRPRRFGQC*RPHGSP Trigger: TGGAGACCCATGAGGCCTTCAACATTGACCGAAACG...CCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR TCA 90 bp | CACGCATCCTCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTGGAAGCGCACGCTGGTaGTATTCCCTACCCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HASSGHWPGSTVLQLVSSGSARW*YSLPDE Trigger: TTCATCGGGTAGGGAATATCACCAGCGTGCGCTTCC...AGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGAGGATGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CCA 90 bp | AGAGTCGCATGGGAGGTTTTTCCACCAGTCTTGTGCAAACAAGGATATCTGAGTGACGCTCTTCAGGGGTaGGGGCCAAGGCCAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVAWEVFPPVLCKQGYLSDALQG*GPRPRA Trigger: AGCCCTTGGCCTTGGCCCCCACCCCTGAAGAGCGTC...ACTCAGATATCCTTGTTTGCACAAGACTGGTGGAAAAACCTCCCATGCGACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAGGATATCTGAGTCTTTCCCAGCAAAAGATTCGTGCCTGGGTTCCAGAGGCTTGTTCCCCGACTTaGGCCCGCGGTAGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQGYLSLSQQKIRAWVPEACSPT*ARGRRR Trigger: TCTCCTCCTACCGCGGGCGCAAGTCGGGGAACAAGC...CTCTGGAACCCAGGCACGAATCTTTTGCTGGGAAAGACTCAGATATCCTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR GCA 90 bp | AACAGGGTGGGAAGAGGACTTGGGAGACATAGCCTAACGATGAAGACAGACCACCAGGAAGCAGGCAGCTaGCTTCTTGTTTCTGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NRVGRGLGRHSLTMKTDHQEAGS*LLVSVP Trigger: CGGGACAGAAACAAGAAGGCAGCTGCCTGCTTCCTG...GTGGTCTGTCTTCATCGTTAGGCTATGTCTCCCAAGTCCTCTTCCCACCCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR GCA 90 bp | TTGCCTTCAACTGACTTCAACAGGCCACCTGCTGGCAGGGGAAACATCCCCAAGCTTCTTTCCGGACACTaGCATCAGCACAGGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSTDFNRPPAGRGNIPKLLSGH*HQHRHS Trigger: ACTATGCCTGTGCTGATGGCAGTGTCCGGAAAGAAG...CTTGGGGATGTTTCCCCTGCCAGCAGGTGGCCTGTTGAAGTCAGTTGAAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR TCA 90 bp | TTTCCTGGGATATCCCATACACGTGGTCAGAAGAAACAATCCATGAAGGAAGGGGGTGCTGTCCCGGGGTaGAGTCTCCTCAGACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPGISHTRGQKKQSMKEGGAVPG*SLLRLA Trigger: TGCAAGTCTGAGGAGACTTCACCCCGGGACAGCACC...CCCTTCCTTCATGGATTGTTTCTTCTGACCACGTGTATGGGATATCCCAGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR GCA 90 bp | TCAGAGGAGCAGCAGGACACTCGGATGTCTTTATTGGTACTCGAGCACAGCATGCAGGGCAGCACACAATaGGAACCAGGAACTCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEEQQDTRMSLLVLEHSMQGSTQ*EPGTLE Trigger: CTCTAGAGTTCCTGGTTCGCATTGTGTGCTGCCCTG...CATGCTGTGCTCGAGTACCAATAAAGACATCCGAGTGTCCTGCTGCTCCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CCA 90 bp | TCAGAGGAGCAGCAGGACACTCGGATGTCTTTATTGGTACTCGAGCACAGCATGCCTTCAGACATGTTTTaGACGGAGGCTTGTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SEEQQDTRMSLLVLEHSMPSDMF*TEACSP Trigger: CGGGGAACAAGCCTCCGTCCAAAACATGTCTGAAGG...CATGCTGTGCTCGAGTACCAATAAAGACATCCGAGTGTCCTGCTGCTCCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
||
| 3UTR CAA 72 bp | GCCCTGAGAGTCGCATGGGAGGTTTTTCCACCAGTCTaGTGCAAACAAGGATATCTGAGTCTTTCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALRVAWEVFPPV*CKQGYLSLSQQ Trigger: TTGCTGGGAAAGACTCAGATATCCTTGTTTGCACAAGACTGGTGGAAAAACCTCCCATGCGACTCTCAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAGGATATCTGAGTCTTTCCCAGCAAAAGATTCGTGCCTGGGTTCCAGAGGCAAAAACACCCGGGTaGCGATCAAAGAAGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQGYLSLSQQKIRAWVPEAKTPG*RSKKNS Trigger: TGAGTTCTTCTTTGATCGGCACCCGGGTGTTTTTGC...CTCTGGAACCCAGGCACGAATCTTTTGCTGGGAAAGACTCAGATATCCTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACAAGGATATCTGAGTCTTTCCCAGCAAAAGATTCGTGCCTGGGTTCCAAGTCTCCTCAGACTTaGAGTAAATGGGCGATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VQTRISESFPAKDSCLGSKSPQT*SKWAIR Trigger: TCGAATCGCCCATTTACTGCAAGTCTGAGGAGACTT...GGAACCCAGGCACGAATCTTTTGCTGGGAAAGACTCAGATATCCTTGTTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
||
| CDS TCA 90 bp | GAGCAGGAAGCAGGCAGCTGCCTTCTTGTTTCTGTCCCGCGTGCCTaGGCGTCTCAGGGCCCGACGCTCTTCAGGGGTGGGGGCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EQEAGSCLLVSVPRA*ASQGPTLFRGGGQG Trigger: GCCTTGGCCCCCACCCCTGAAGAGCGTCGGGCCCTGAGACGCTCAGGCACGCGGGACAGAAACAAGAAGGCAGCTGCCTGCTTCCTGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
||
| CDS CCA 90 bp | TCTCCGACGCCTCGCCCTTGGCCATCTCCTCCTTCAGACATGTTTTaGACGGAGGCTTGTTCCCCGACTTGCGCCCGCGGTAGGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPTPRPWPSPPSDMF*TEACSPTCARGRRR Trigger: TCTCCTCCTACCGCGGGCGCAAGTCGGGGAACAAGCCTCCGTCCAAAACATGTCTGAAGGAGGAGATGGCCAAGGGCGAGGCGTCGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS-3UTR CAA 90 bp | ATTGCAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTTCTCAGACCCCTGAGCCAGTTTTGGACGGAGGCTaGTTCCCCGACTTGCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: IATGLLSPEVSPSQTPEPVLDGG*FPDLRP Trigger: CGGGCGCAAGTCGGGGAACAAGCCTCCGTCCAAAAC...TGGCTCAGGGGTCTGAGAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CAA 90 bp | ATTGCAACTGGTCTCCTCTCGCCCGAGGTGTCCCCTTCTCAGACCCCTGAGCCACGCGTGCCGCCCACGTaGATGATGATCTTCTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: IATGLLSPEVSPSQTPEPRVPPT*MMIFSD Trigger: GTCGGAGAAGATCATCATCAACGTGGGCGGCACGCG...TGGCTCAGGGGTCTGAGAAGGGGACACCTCGGGCGAGAGGAGACCAGTTGCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
||
| CDS TCA 90 bp | AGCCTTTCCGGACACTGCCATCAGCACAGGCATAGTCCCCAGCACTaGGCAGGAAGCAGGCAGCTGCCTTCTTGTTTCTGTCCCGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSGHCHQHRHSPQH*AGSRQLPSCFCPAC Trigger: GCACGCGGGACAGAAACAAGAAGGCAGCTGCCTGCTTCCTGCTCAGTGCTGGGGACTATGCCTGTGCTGATGGCAGTGTCCGGAAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238670.2 |
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| CDS-3UTR CAA 90 bp | GCCACTCTAAGAGAGGGTGAGGACTTCAGCGTGGGCATAGTTGGACGAGAGGGCCAGGCAGCTGCCTTCTaGTTTCTGTCCCGCGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ATLREGEDFSVGIVGREGQAAAF*FLSRVP Trigger: AGGCACGCGGGACAGAAACAAGAAGGCAGCTGCCTG...GCCCTCTCGTCCAACTATGCCCACGCTGAAGTCCTCACCCTCTCTTAGAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS TCA 90 bp | CTTCTTTCCGGACACTGCCATCAGCACAGGCATAGTCCCCAGCACTaGGCAGGAAGCAGGCAGCTGCCTTCTTGTTTCTGTCCCGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSGHCHQHRHSPQH*AGSRQLPSCFCPAC Trigger: GCACGCGGGACAGAAACAAGAAGGCAGCTGCCTGCTTCCTGCTCAGTGCTGGGGACTATGCCTGTGCTGATGGCAGTGTCCGGAAAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS GCA 90 bp | TGGTGTCACTGTAGGTGCTGTCCCGGGGTGAAGTCTCCTCAGACTTaGAGTAAATGGGCGATTCGAGCTGGGGTGGCCGTGGTACGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WCHCRCCPGVKSPQT*SKWAIRAGVAVVRA Trigger: AGCACGTACCACGGCCACCCCAGCTCGAATCGCCCATTTACTGCAAGTCTGAGGAGACTTCACCCCGGGACAGCACCTACAGTGACACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS GCA 90 bp | CGAGAGCAGGAGCTTTCTTGGAGGATAGGGCGAACTGTACCGCGATaGCAGTGGAGACAGCCCCAGACTGGTTCCTGCTGCTCCAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: REQELSWRIGRTVPR*QWRQPQTGSCCSSY Trigger: ATAGCTGGAGCAGCAGGAACCAGTCTGGGGCTGTCTCCACTGGCATCGCGGTACAGTTCGCCCTATCCTCCAAGAAAGCTCCTGCTCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238670.2 |
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| CDS-3UTR CAA 90 bp | CTCGAGCACAGCATGACAGTTGAGGGCATGCAGACAGGGCACAGTGGGCCCAGCACGTTTCGGTCAATGTaGAAGGCCTCATGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEHSMTVEGMQTGHSGPSTFRSM*KASWVS Trigger: GGAGACCCATGAGGCCTTCAACATTGACCGAAACGT...GCTGGGCCCACTGTGCCCTGTCTGCATGCCCTCAACTGTCATGCTGTGCTCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS CCA 90 bp | TGTAGGTGCTGTCCCGGGGTGAAGTCTCCTCAGACTTGCAGTAAATaGGCGATTCGAGCTGGGGTGGCCGTGGTACGTGCTTCTTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CRCCPGVKSPQTCSK*AIRAGVAVVRASFA Trigger: AGCGAAAGAAGCACGTACCACGGCCACCCCAGCTCGAATCGCCCATTTACTGCAAGTCTGAGGAGACTTCACCCCGGGACAGCACCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS TCA 90 bp | TCTACCTCCCGCCGGAAGCGCACGCTGGTGATATTCCCTACCCGATaGATCTCCGTCACGTTTCGGTCAATGTTGAAGGCCTCATGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: STSRRKRTLVIFPTR*ISVTFRSMLKASWV Trigger: GACCCATGAGGCCTTCAACATTGACCGAAACGTGACGGAGATTCATCGGGTAGGGAATATCACCAGCGTGCGCTTCCGGCGGGAGGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS CCA 90 bp | CAGGAGCTTTCTTGGAGGATAGGGCGAACTGTACCGCGATGCCAGTaGAGACAGCCCCAGACTGGTTCCTGCTGCTCCAGCTATGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QELSWRIGRTVPRCQ*RQPQTGSCCSSYVV Trigger: AACAACATAGCTGGAGCAGCAGGAACCAGTCTGGGGCTGTCTCCACTGGCATCGCGGTACAGTTCGCCCTATCCTCCAAGAAAGCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238670.2 |
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| CDS-3UTR CAA 90 bp | TCTGGCCACTGGCCAGGAAGTACAGTATTGCAACTGGTCTCCTCTCGCCCGAGGTCCTTCAGACATGTTTaGGACGGAGGCTTGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGHWPGSTVLQLVSSRPRSFRHV*DGGLFP Trigger: GGGGAACAAGCCTCCGTCCAAAACATGTCTGAAGGA...CCTCGGGCGAGAGGAGACCAGTTGCAATACTGTACTTCCTGGCCAGTGGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CAA 90 bp | TCAGAGGAGCAGCAGGACACTCGGATGTCTTTATTGGTACTCGAGCACAGCATGTCCGACGCCTCGCCCTaGGCCATCTCCTCCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SEEQQDTRMSLLVLEHSMSDASP*AISSFR Trigger: TCTGAAGGAGGAGATGGCCAAGGGCGAGGCGTCGGA...CATGCTGTGCTCGAGTACCAATAAAGACATCCGAGTGTCCTGCTGCTCCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CAA 90 bp | AACAGGGTGGGAAGAGGACTTGGGAGACATAGCCTAACGATGAAGACAGACCACAAGTCGGTGTGGTCGTaGCCCCGTGGGTCAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: NRVGRGLGRHSLTMKTDHKSVWS*PRGSDG Trigger: GCCATCTGACCCACGGGGCAACGACCACACCGACTT...GTGGTCTGTCTTCATCGTTAGGCTATGTCTCCCAAGTCCTCTTCCCACCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CAA 90 bp | TCAGAGGAGCAGCAGGACACTCGGATGTCTTTATTGGTACTCGAGCACAGCATGACATCGCGAGCTGCCTaGGAAGACAAACCACTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SEEQQDTRMSLLVLEHSMTSRAA*EDKPLN Trigger: ATTGAGTGGTTTGTCTTCCAAGGCAGCTCGCGATGT...CATGCTGTGCTCGAGTACCAATAAAGACATCCGAGTGTCCTGCTGCTCCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CAA 90 bp | TGGGATATCCCATACACGTGGTCAGAAGAAACAATCCATGAAGGAAGGGAGGAGGCTTTCGGCTCAACATaGCCTTCTTTCCGGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: WDIPYTWSEETIHEGREEAFGST*PSFRTL Trigger: CAGTGTCCGGAAAGAAGGCAATGTTGAGCCGAAAGC...CTCCTCCCTTCCTTCATGGATTGTTTCTTCTGACCACGTGTATGGGATATCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS-3UTR CAA 90 bp | AGAGTCGCATGGGAGGTTTTTCCACCAGTCTTGTGCAAACAAGGATATCTGAGTATGTTGAGCAAGTTCTaGACAAAGTCCAGCGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: RVAWEVFPPVLCKQGYLSMLSKF*TKSSVS Trigger: TGATACGCTGGACTTTGTCAAGAACTTGCTCAACAT...ACTCAGATATCCTTGTTTGCACAAGACTGGTGGAAAAACCTCCCATGCGACTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009617.10 |
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| CDS TCA 72 bp | GCAGGCAGCTGCCTTCTTGTTTCTGTCCCGCGTGCCTaGGCGTCTCAGGGCCCGACGCTCTTCAGGGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGSCLLVSVPRA*ASQGPTLFRGG Trigger: CCCACCCCTGAAGAGCGTCGGGCCCTGAGACGCTCAGGCACGCGGGACAGAAACAAGAAGGCAGCTGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS GCA 72 bp | GGAAGCAGGCAGCTGCCTTCTTGTTTCTGTCCCGCGTaGCTGAGCGTCTCAGGGCCCGACGCTCTTCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRQLPSCFCPA*LSVSGPDALQG Trigger: CCCCTGAAGAGCGTCGGGCCCTGAGACGCTCAGGCACGCGGGACAGAAACAAGAAGGCAGCTGCCTGCTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS CAA 72 bp | GCCTCGCCCTTGGCCATCTCCTCCTTCAGACATGTTTaGGACGGAGGCTTGTTCCCCGACTTGCGCCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPLAISSFRHV*DGGLFPDLRPR Trigger: CCGCGGGCGCAAGTCGGGGAACAAGCCTCCGTCCAAAACATGTCTGAAGGAGGAGATGGCCAAGGGCGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS CCA 72 bp | CCTCGCCCTTGGCCATCTCCTCCTTCAGACATGTTTTaGACGGAGGCTTGTTCCCCGACTTGCGCCCGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRPWPSPPSDMF*TEACSPTCARG Trigger: ACCGCGGGCGCAAGTCGGGGAACAAGCCTCCGTCCAAAACATGTCTGAAGGAGGAGATGGCCAAGGGCGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS CCA 72 bp | TCTTGGAGGATAGGGCGAACTGTACCGCGATGCCAGTaGAGACAGCCCCAGACTGGTTCCTGCTGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWRIGRTVPRCQ*RQPQTGSCCSS Trigger: GCTGGAGCAGCAGGAACCAGTCTGGGGCTGTCTCCACTGGCATCGCGGTACAGTTCGCCCTATCCTCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238670.2 |
||
| CDS GCA 72 bp | TGTAGGTGCTGTCCCGGGGTGAAGTCTCCTCAGACTTaGAGTAAATGGGCGATTCGAGCTGGGGTGGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRCCPGVKSPQT*SKWAIRAGVAV Trigger: CACGGCCACCCCAGCTCGAATCGCCCATTTACTGCAAGTCTGAGGAGACTTCACCCCGGGACAGCACCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
||
| CDS GCA 72 bp | GAGCTTTCTTGGAGGATAGGGCGAACTGTACCGCGATaGCAGTGGAGACAGCCCCAGACTGGTTCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ELSWRIGRTVPR*QWRQPQTGSCC Trigger: GCAGCAGGAACCAGTCTGGGGCTGTCTCCACTGGCATCGCGGTACAGTTCGCCCTATCCTCCAAGAAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238670.2 |
||
| CDS CCA 72 bp | TGTCCCGGGGTGAAGTCTCCTCAGACTTGCAGTAAATaGGCGATTCGAGCTGGGGTGGCCGTGGTACGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPGVKSPQTCSK*AIRAGVAVVRA Trigger: AGCACGTACCACGGCCACCCCAGCTCGAATCGCCCATTTACTGCAAGTCTGAGGAGACTTCACCCCGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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| CDS CAA 90 bp | GCCAGTGGAGACAGCCCCAGACTGGTTCCTGCTGCTCCAGCTATGTaGTTTAGACTCCGGGACTTTTCACAGCCTTTCCGGACACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASGDSPRLVPAAPAM*FRLRDFSQPFRTLP Trigger: TGGCAGTGTCCGGAAAGGCTGTGAAAAGTCCCGGAGTCTAAACAACATAGCTGGAGCAGCAGGAACCAGTCTGGGGCTGTCTCCACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238670.2 |
||
| CDS TCA 72 bp | CGCCGGAAGCGCACGCTGGTGATATTCCCTACCCGATaGATCTCCGTCACGTTTCGGTCAATGTTGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRKRTLVIFPTR*ISVTFRSMLKA Trigger: GGCCTTCAACATTGACCGAAACGTGACGGAGATTCATCGGGTAGGGAATATCACCAGCGTGCGCTTCCGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
||
| CDS TCA 72 bp | GCTCTGTTTCTACCTCCCGCCGGAAGCGCACGCTGGTaGTATTCCCTACCCGATGAATCTCCGTCACGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALFLPPAGSARW*YSLPDESPSRF Trigger: GAAACGTGACGGAGATTCATCGGGTAGGGAATATCACCAGCGTGCGCTTCCGGCGGGAGGTAGAAACAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
||
| CDS TCA 72 bp | GGACACTGCCATCAGCACAGGCATAGTCCCCAGCACTaGGCAGGAAGCAGGCAGCTGCCTTCTTGTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GHCHQHRHSPQH*AGSRQLPSCFC Trigger: ACAGAAACAAGAAGGCAGCTGCCTGCTTCCTGCTCAGTGCTGGGGACTATGCCTGTGCTGATGGCAGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
||
| CDS GCA 72 bp | TCCTCATCAGACAGCACCGCATTAGCATCGCCATTCTaGTTAGAGTCGGCCCGTTTCCTCTCGACCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSDSTALASPF*LESARFLSTTP Trigger: GGGTGTGGTCGAGAGGAAACGGGCCGACTCTAAGCAGAATGGCGATGCTAATGCGGTGCTGTCTGATGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
||
| CDS CCA 72 bp | CTTGAAGTCGGTGTGGTCGTTGCCCCGTGGGTCAGATaGCCTGGCCCCAATTCGCTCGGCATAATAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: LEVGVVVAPWVR*PGPNSLGIIDH Trigger: ATGATCTATTATGCCGAGCGAATTGGGGCCAGGCCATCTGACCCACGGGGCAACGACCACACCGACTTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009617.10 ENSMUST00000238670.2 |
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