Pregenerated sensors for KCNC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062785Ensembl transcript IDs: ENSMUST00000107906.6, ENSMUST00000107907.10, ENSMUST00000207493.2, ENSMUST00000207497.2, ENSMUST00000208651.2, ENSMUST00000209177.2
Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | GCGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTaGCTGCGGGTGGGCCAGGAAGACCCGCCATTAGCACCAGAGTTG | + |
Preference number: 1 (lower is better) Translates to: AWGRLGGGACRLLPP*LRVGQEDPPLAPEL Trigger: CAACTCTGGTGCTAATGGCGGGTCTTCCTGGCCCACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 90 bp | GCGTCATGCAGCGCATGCGTGCAGTTGCAGGCACCCTGGCGGCCGTaGGGAAAAGGGAGACCAGGACCTGGCTCTCCCTCCCCTAATCCC | + |
Preference number: 1 (lower is better) Translates to: ASCSACVQLQAPWRP*GKGRPGPGSPSPNP Trigger: GGGATTAGGGGAGGGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAACTGCACGCATGCGCTGCATGACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 90 bp | GTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATGCACCCTGGGTaGGCGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCT | + |
Preference number: 1 (lower is better) Translates to: VDMRQLLRGWFMHPG*AWGRLGGGACRLLP Trigger: AGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACGCCCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 90 bp | CAGCGAATAGAGGGAGCAGATCCCTGGAGGCGGGCGTGGGTGGAATaGACCAGCTGGCGTCCTCCAAGCCCAAGAGCAGCTGGCAGAACC | + |
Preference number: 1 (lower is better) Translates to: QRIEGADPWRRAWVE*TSWRPPSPRAAGRT Trigger: GGTTCTGCCAGCTGCTCTTGGGCTTGGAGGACGCCAGCTGGTGCATTCCACCCACGCCCGCCTCCAGGGATCTGCTCCCTCTATTCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 90 bp | GGAGCTCTCTGTAATCAGACAGACGGAGCTTGTCCGGGAAGGTCTTaGGCCAGAGGCGCCAGGGGACAGAGGAGTGTGATGTCAGGGAGT | + |
Preference number: 1 (lower is better) Translates to: GALCNQTDGACPGRS*ARGARGQRSVMSGS Trigger: ACTCCCTGACATCACACTCCTCTGTCCCCTGGCGCCTCTGGCGCAAGACCTTCCCGGACAAGCTCCGTCTGTCTGATTACAGAGAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR TCA 90 bp | TGCATCAAGAATTGGGCCCAAGGACACCCCCACCGACAACTCTGGTaGCAGCGGGAGGTTTCCCTGAGGCGGTGGGAACAAGGGATTGCT | + |
Preference number: 1 (lower is better) Translates to: CIKNWAQGHPHRQLW*QREVSLRRWEQGIA Trigger: AGCAATCCCTTGTTCCCACCGCCTCAGGGAAACCTCCCGCTGTCACCAGAGTTGTCGGTGGGGGTGTCCTTGGGCCCAATTCTTGATGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 90 bp | TCTTGGGATAGAGTGGAGACTGCAGTGGGTAGAGGGTTCTGGGCCTaGAGGGCCAAGTCCATGCAGCGAATAGAGGGAGCAGATCCCTGG | + |
Preference number: 1 (lower is better) Translates to: SWDRVETAVGRGFWA*RAKSMQRIEGADPW Trigger: CCAGGGATCTGCTCCCTCTATTCGCTGCATGGACTTGGCCCTCCAGGCCCAGAACCCTCTACCCACTGCAGTCTCCACTCTATCCCAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 90 bp | TCTAGGGTACTAGTCTCACCTCTTGGGATAGAGTGGAGACTGCAGTaGGTAGAGGGTTCTGGGCCTGGAGGGCCAAGTCCATGCAGCGAA | + |
Preference number: 1 (lower is better) Translates to: SRVLVSPLGIEWRLQ*VEGSGPGGPSPCSE Trigger: TTCGCTGCATGGACTTGGCCCTCCAGGCCCAGAACCCTCTACCCACTGCAGTCTCCACTCTATCCCAAGAGGTGAGACTAGTACCCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 90 bp | CCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGTaGGGAAGGAGAGGAGCCATTGAGCTCAGAAAGACCCCCTTCCCC | + |
Preference number: 1 (lower is better) Translates to: PVRPLEVEKLIAVSV*GRRGAIELRKTPFP Trigger: GGGGAAGGGGGTCTTTCTGAGCTCAATGGCTCCTCTCCTTCCCCACACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR TCA 90 bp | CAATGTCAGGGTCTTGAGGACTGTCAGAACCCCGAAGGCTGGAAGTaGGCGGAGGTGCAAGGGAAGAGTGGAAAAACTCTGTGGTGCAGT | + |
Preference number: 1 (lower is better) Translates to: QCQGLEDCQNPEGWK*AEVQGKSGKTLWCS Trigger: ACTGCACCACAGAGTTTTTCCACTCTTCCCTTGCACCTCCGCTCACTTCCAGCCTTCGGGGTTCTGACAGTCCTCAAGACCCTGACATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 90 bp | TTTGCAAACTTCAGCACACGAAGAGGGAACGGGAGTCCCACGCTCTaGGAAACTCTGGTGGCCATGAAGAAAGTGTGTTTTGGCACCATG | + |
Preference number: 1 (lower is better) Translates to: FANFSTRRGNGSPTL*ETLVAMKKVCFGTM Trigger: CATGGTGCCAAAACACACTTTCTTCATGGCCACCAGAGTTTCCCAGAGCGTGGGACTCCCGTTCCCTCTTCGTGTGCTGAAGTTTGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 90 bp | GTGAGCCTGCAAAGAGCACACAAGTTTAAAACACTTGGTCGTCTGTaGACTTTGCAAACTTCAGCACACGAAGAGGGAACGGGAGTCCCA | + |
Preference number: 1 (lower is better) Translates to: VSLQRAHKFKTLGRL*TLQTSAHEEGTGVP Trigger: TGGGACTCCCGTTCCCTCTTCGTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGCTCTTTGCAGGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCGCGCATGCGTGCAGTTaGAGGCACCCTGGCGGCCGT | + |
Preference number: 2 (lower is better) Translates to: IPESAHWPAPPAPGQARPAHACS*RHPGGR Trigger: ACGGCCGCCAGGGTGCCTGCAACTGCACGCATGCGC...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR TCA 90 bp | CGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGCGCACCAGCCGGGTGTaGGCCTGCAAAGAGCACACA | + |
Preference number: 2 (lower is better) Translates to: RGGGLGEEPADSFLPACGRTSRV*ACKEHT Trigger: TGTGTGCTCTTTGCAGGCTCACACCCGGCTGGTGCG...CCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGGGGGTCGGGGAGGCATaGAAACTGGAGTGGGTGCCC | + |
Preference number: 2 (lower is better) Translates to: WGRLGGGACRLLPPCLRVGVGEA*KLEWVP Trigger: GGGCACCCACTCCAGTTTGCATGCCTCCCCGACCCC...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR TCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGCCCGAAGGCTGGAAGTaGGCGGAGGTGCAAGGGAAG | + |
Preference number: 2 (lower is better) Translates to: WGRLGGGACRLLPPCLRVPEGWK*AEVQGK Trigger: CTTCCCTTGCACCTCCGCTCACTTCCAGCCTTCGGG...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR TCA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCGGGGACAGAGGAGTGTaGTGTCAGGGAGTTGGGGCC | + |
Preference number: 2 (lower is better) Translates to: IPESAHWPAPPAPGQARPGDRGV*CQGVGA Trigger: GGCCCCAACTCCCTGACATCACACTCCTCTGTCCCC...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGCATGCAGCGCATGCGTaGAGTTGCAGGCACCCTGGC | + |
Preference number: 2 (lower is better) Translates to: WGRLGGGACRLLPPCLRVHAAHA*SCRHPG Trigger: GCCAGGGTGCCTGCAACTGCACGCATGCGCTGCATG...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | ACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGAGGGATGGGAGGCAGATaGGGGGCTCCCCAACACAGG | + |
Preference number: 2 (lower is better) Translates to: TGGTRGSREVSGGDKSWGGMGGR*GAPQHR Trigger: CCTGTGTTGGGGAGCCCCCCATCTGCCTCCCATCCC...TCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
3UTR-3UTR GCA 90 bp | GCCTGGAGGGCCAAGTCCATGCAGCGAATAGAGGGAGCAGATCCCTGGAGGCGGGGGGTCGGGGAGGCATaGAAACTGGAGTGGGTGCCC | + |
Preference number: 2 (lower is better) Translates to: AWRAKSMQRIEGADPWRRGVGEA*KLEWVP Trigger: GGGCACCCACTCCAGTTTGCATGCCTCCCCGACCCC...CCGCCTCCAGGGATCTGCTCCCTCTATTCGCTGCATGGACTTGGCCCTCCAGGC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | ACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGCAAAGAGCCGTGGGGTGTGGGAGTaGAGGGTGCCAGGTTCTGTC | + |
Preference number: 2 (lower is better) Translates to: TQLLRCQDAPAGCEPAKSRGVWE*RVPGSV Trigger: GACAGAACCTGGCACCCTGCACTCCCACACCCCACG...GCTCTTTGCAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | GGGAGGGTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATGCACCCTGGGTGGCCAGCGCAGGAGGGGTaGGCGACGCATGCGTGTGTA | + |
Preference number: 2 (lower is better) Translates to: GRVDMRQLLRGWFMHPGWPAQEG*ATHACV Trigger: TACACACGCATGCGTCGCGCACCCCTCCTGCGCTGG...CCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAACCCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCCCCGGGGGTGTCTGCTaGCATCGTCTCTTTTGCATA | + |
Preference number: 2 (lower is better) Translates to: IPESAHWPAPPAPGQARPPGGVC*HRLFCI Trigger: TATGCAAAAGAGACGATGCCAGCAGACACCCCCGGG...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | GTGGCAACACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGAGAGGGTTCTGGGCCTaGAGGGCCAAGTCCATGCAG | + |
Preference number: 2 (lower is better) Translates to: VATPNCCAARTHQPGVSLRGFWA*RAKSMQ Trigger: CTGCATGGACTTGGCCCTCCAGGCCCAGAACCCTCT...CAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGTGTTGCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR TCA 90 bp | GGGAGGGTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATGCACCCTGGGTGGCGCACCAGCCGGGTGTaGGCCTGCAAAGAGCACACA | + |
Preference number: 2 (lower is better) Translates to: GRVDMRQLLRGWFMHPGWRTSRV*ACKEHT Trigger: TGTGTGCTCTTTGCAGGCTCACACCCGGCTGGTGCG...CCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAACCCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | GGGAGGGTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATGCACCCTGGGTGGGCGTCATGCAGCGCATaGGTGCAGTTGCAGGCACCC | + |
Preference number: 2 (lower is better) Translates to: GRVDMRQLLRGWFMHPGWASCSA*VQLQAP Trigger: GGGTGCCTGCAACTGCACGCATGCGCTGCATGACGC...CCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAACCCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCGCATGCAAACTGGAGTaGGTGCCCCAAGATGGAATC | + |
Preference number: 2 (lower is better) Translates to: IPESAHWPAPPAPGQARPACKLE*VPQDGI Trigger: GATTCCATCTTGGGGCACCCACTCCAGTTTGCATGC...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGCCTCTTGGGATAGAGTaGAGACTGCAGTGGGTAGAG | + |
Preference number: 2 (lower is better) Translates to: WGRLGGGACRLLPPCLRVPLGIE*RLQWVE Trigger: CTCTACCCACTGCAGTCTCCACTCTATCCCAAGAGG...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGGACTTCTCGTAACCTaGGGGGAAGGGACAGGGGGA | + |
Preference number: 2 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRGLLVT*GEGTGG Trigger: TCCCCCTGTCCCTTCCCCCCAGGTTACGAGAAGTCC...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
3UTR-3UTR CCA 90 bp | CGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGGTGTCCTATGGCTCATaGAGACCTGAGGTTTGCTTT | + |
Preference number: 2 (lower is better) Translates to: RGGGLGEEPADSFLPACGVSYGS*RPEVCF Trigger: AAAGCAAACCTCAGGTCTCCATGAGCCATAGGACAC...CCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGGTTTCCCTGAGGCGGTaGGAACAAGGGATTGCTAAT | + |
Preference number: 2 (lower is better) Translates to: WGRLGGGACRLLPPCLRVVSLRR*EQGIAN Trigger: ATTAGCAATCCCTTGTTCCCACCGCCTCAGGGAAAC...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CCATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCAGCAGGGGAAAACAGTaGGAAGTGGTTGGTACCCTT | + |
Preference number: 2 (lower is better) Translates to: PSLRAPIGQPLPRQVRLGSRGKQ*EVVGTL Trigger: AAGGGTACCAACCACTTCCCACTGTTTTCCCCTGCT...GCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CAA 90 bp | CTAGCTCCGACCTTAGAGGCTCCCAGCAGCCTCCCCTCCAACTCTTaGCACACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGG | + |
Preference number: 2 (lower is better) Translates to: LAPTLEAPSSLPSNS*HTAPGGLLLKRGSG Trigger: CCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGTGTGCAAAGAGTTGGAGGGGAGGCTGCTGGGAGCCTCTAAGGTCGGAGCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | CGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGACACTTGGTCGTCTGTaGACTTTGCAAACTTCAGCA | + |
Preference number: 2 (lower is better) Translates to: RGGGLGEEPADSFLPACGTLGRL*TLQTSA Trigger: TGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGT...CCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTCAATGCTGCTCAGGCTaGGGGACTTCTCGTAACCTG | + |
Preference number: 2 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRQCCSG*GTSRNL Trigger: CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTG...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
3UTR-3UTR GCA 90 bp | ACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGCAAAGAGCGCAAACTGGAGTGGGTaGCCCAAGATGGAATCAGCT | + |
Preference number: 2 (lower is better) Translates to: TQLLRCQDAPAGCEPAKSANWSG*PKMESA Trigger: AGCTGATTCCATCTTGGGGCACCCACTCCAGTTTGC...GCTCTTTGCAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCGGAAGTGAGCGGAGGTaGAAGGGAAGAGTGGAAAAA | + |
Preference number: 2 (lower is better) Translates to: VAGTLAAVGKRETRTWLSGSERR*KGRVEK Trigger: TTTTTCCACTCTTCCCTTGCACCTCCGCTCACTTCC...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | CCATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCACACTTGGTCGTCTGTaGACTTTGCAAACTTCAGCA | + |
Preference number: 2 (lower is better) Translates to: PSLRAPIGQPLPRQVRLGTLGRL*TLQTSA Trigger: TGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGT...GCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | GCCTGGAGGGCCAAGTCCATGCAGCGAATAGAGGGAGCAGATCCCTGGAGGCGGCCCGGGGGTGTCTGCTaGCATCGTCTCTTTTGCATA | + |
Preference number: 2 (lower is better) Translates to: AWRAKSMQRIEGADPWRRPGGVC*HRLFCI Trigger: TATGCAAAAGAGACGATGCCAGCAGACACCCCCGGG...CCGCCTCCAGGGATCTGCTCCCTCTATTCGCTGCATGGACTTGGCCCTCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CCTCTTTGCCCACCAGTAGGGGAAGAGGGGTTGCTGGAGTTTGAACCCTGGGACGTGGGTAGAGGGTTCTaGGCCTGGAGGGCCAAGTCC | + |
Preference number: 2 (lower is better) Translates to: PLCPPVGEEGLLEFEPWDVGRGF*AWRAKS Trigger: GGACTTGGCCCTCCAGGCCCAGAACCCTCTACCCAC...GTCCCAGGGTTCAAACTCCAGCAACCCCTCTTCCCCTACTGGTGGGCAAAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | GTGGCAACACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGGGTGCAAGGGAAGAGTaGAAAAACTCTGTGGTGCAG | + |
Preference number: 2 (lower is better) Translates to: VATPNCCAARTHQPGVSLGAREE*KNSVVQ Trigger: CTGCACCACAGAGTTTTTCCACTCTTCCCTTGCACC...CAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGTGTTGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCAGCAGGGGAAAACAGTaGGAAGTGGTTGGTACCCTT | + |
Preference number: 2 (lower is better) Translates to: VAGTLAAVGKRETRTWLSSRGKQ*EVVGTL Trigger: AAGGGTACCAACCACTTCCCACTGTTTTCCCCTGCT...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | CGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTTGCATAGGAATTGTTaGATCAAGAATTGGGCCCAA | + |
Preference number: 2 (lower is better) Translates to: RGGGLGEEPADSFLPACGLHRNC*IKNWAQ Trigger: TTGGGCCCAATTCTTGATGCAACAATTCCTATGCAA...CCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGGTGGGTGCCCCAAGATaGAATCAGCTTTTAGTTATT | + |
Preference number: 2 (lower is better) Translates to: WGRLGGGACRLLPPCLRVVGAPR*NQLLVI Trigger: AATAACTAAAAGCTGATTCCATCTTGGGGCACCCAC...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCCTGGAGTTTGAACCCTaGGACCTTAGCACATTAAGC | + |
Preference number: 2 (lower is better) Translates to: VAGTLAAVGKRETRTWLSLEFEP*DLSTLS Trigger: GCTTAATGTGCTAAGGTCCCAGGGTTCAAACTCCAG...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | AGCCCAGTGTCTCTAGGACACTCCCTCCCACCATTCCCAGTTGCTAACCTGGGGACACAGGCTCACTGTTaGGGGGACGGAGAAACGCCG | + |
Preference number: 2 (lower is better) Translates to: SPVSLGHSLPPFPVANLGTQAHC*GDGETP Trigger: CGGCGTTTCTCCGTCCCCCCAACAGTGAGCCTGTGT...CCCCAGGTTAGCAACTGGGAATGGTGGGAGGGAGTGTCCTAGAGACACTGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
3UTR-3UTR TCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCAAACTCTGGTGGCCATaGAGAAAGTGTGTTTTGGCA | + |
Preference number: 2 (lower is better) Translates to: VAGTLAAVGKRETRTWLSKLWWP*RKCVLA Trigger: TGCCAAAACACACTTTCTTCATGGCCACCAGAGTTT...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | CGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGACTCAAAATGTCCCTTaGATAGGAATTGTTGCATCA | + |
Preference number: 2 (lower is better) Translates to: RGGGLGEEPADSFLPACGTQNVP*IGIVAS Trigger: TGATGCAACAATTCCTATGCAAGGGACATTTTGAGT...CCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGGCACCCTGGCGGCCGTaGGGAAAAGGGAGACCAGGA | + |
Preference number: 2 (lower is better) Translates to: QARPVRPLEVEKLIAVSVAPWRP*GKGRPG Trigger: TCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGC...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR TCA 90 bp | CTTGGGGGAGGTAGCATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCCCGAAGGCTGGAAGTaGGCGGAGGTGCAAGGGAAG | + |
Preference number: 2 (lower is better) Translates to: LGGGSILEPRRDLRKFSIPEGWK*AEVQGK Trigger: CTTCCCTTGCACCTCCGCTCACTTCCAGCCTTCGGG...GATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGATGCTACCTCCCCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGGGGAGGCATGCAAACTaGAGTGGGTGCCCCAAGATG | + |
Preference number: 2 (lower is better) Translates to: QARPVRPLEVEKLIAVSVGRHAN*SGCPKM Trigger: CATCTTGGGGCACCCACTCCAGTTTGCATGCCTCCC...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGCCTCAGCCCATACCCTaGTGTCTAGAGTCCCCTAGC | + |
Preference number: 2 (lower is better) Translates to: QARPVRPLEVEKLIAVSVPQPIP*CLESPS Trigger: GCTAGGGGACTCTAGACACCAGGGTATGGGCTGAGG...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGCAGAGACATCAAATATaGCAGGAGCTTCCGGGGTGG | + |
Preference number: 2 (lower is better) Translates to: REVSGGDKSWGQKYRESRQRHQI*QELPGW Trigger: CCACCCCGGAAGCTCCTGCCATATTTGATGTCTCTG...CCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
3UTR-3UTR TCA 90 bp | ACTCAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTAGGACGAGGTCTCAGGCGGTaGCAAGAGCTGGGGACAGAA | + |
Preference number: 2 (lower is better) Translates to: TQTAGENLEGNGSPVSLGRGLRR*QELGTE Trigger: TTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCG...TCCTAGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
3UTR-3UTR GCA 90 bp | GGGAGGGTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATGCACCCTGGGTGGTTGCATAGGAATTGTTaGATCAAGAATTGGGCCCAA | + |
Preference number: 2 (lower is better) Translates to: GRVDMRQLLRGWFMHPGWLHRNC*IKNWAQ Trigger: TTGGGCCCAATTCTTGATGCAACAATTCCTATGCAA...CCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAACCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCTGCAGTCCAGGCCAGTaGGGGATGGATGGAGTGATG | + |
Preference number: 2 (lower is better) Translates to: NVPCIGIVASRIGPKDTPCSPGQ*GMDGVM Trigger: CATCACTCCATCCATCCCCCACTGGCCTGGACTGCA...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGAGTGGAAAAACTCTGTaGTGCAGTCCAGGCCAGTGG | + |
Preference number: 2 (lower is better) Translates to: QARPVRPLEVEKLIAVSVSGKTL*CSPGQW Trigger: CCACTGGCCTGGACTGCACCACAGAGTTTTTCCACT...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR TCA 90 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTGCAAACTTCAGCACACGGGGACAGAGGAGTGTaGTGTCAGGGAGTTGGGGCC | + |
Preference number: 2 (lower is better) Translates to: AHKFKTLGRLCTLQTSAHGDRGV*CQGVGA Trigger: GGCCCCAACTCCCTGACATCACACTCCTCTGTCCCC...GTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGGGTGCAAGGGAAGAGTaGAAAAACTCTGTGGTGCAG | + |
Preference number: 2 (lower is better) Translates to: QARPVRPLEVEKLIAVSVGAREE*KNSVVQ Trigger: CTGCACCACAGAGTTTTTCCACTCTTCCCTTGCACC...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CCTCTTTGCCCACCAGTAGGGGAAGAGGGGTTGCTGGAGTTTGAACCCTGGGACAATACTGGAATGGGATaGGAGCTCTCTGTAATCAGA | + |
Preference number: 2 (lower is better) Translates to: PLCPPVGEEGLLEFEPWDNTGMG*ELSVIR Trigger: TCTGATTACAGAGAGCTCCCATCCCATTCCAGTATT...GTCCCAGGGTTCAAACTCCAGCAACCCCTCTTCCCCTACTGGTGGGCAAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | CTTGGGGGAGGTAGCATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCGCAAACTGGAGTGGGTaGCCCAAGATGGAATCAGCT | + |
Preference number: 2 (lower is better) Translates to: LGGGSILEPRRDLRKFSIANWSG*PKMESA Trigger: AGCTGATTCCATCTTGGGGCACCCACTCCAGTTTGC...GATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGATGCTACCTCCCCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CTTGGGGGAGGTAGCATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCGCATGCAAACTGGAGTaGGTGCCCCAAGATGGAATC | + |
Preference number: 2 (lower is better) Translates to: LGGGSILEPRRDLRKFSIACKLE*VPQDGI Trigger: GATTCCATCTTGGGGCACCCACTCCAGTTTGCATGC...GATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGATGCTACCTCCCCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCAGTGGAAAAACTCTGTaGTGCAGTCCAGGCCAGTGG | + |
Preference number: 2 (lower is better) Translates to: NVPCIGIVASRIGPKDTPSGKTL*CSPGQW Trigger: CCACTGGCCTGGACTGCACCACAGAGTTTTTCCACT...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CAA 90 bp | CTGCAAAGAGCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTaGCAAACTTCAGCACACGAAGAGGGAACGGGAGTCCCACGCTCT | + |
Preference number: 2 (lower is better) Translates to: LQRAHKFKTLGRLCT*QTSAHEEGTGVPRS Trigger: AGAGCGTGGGACTCCCGTTCCCTCTTCGTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGCTCTTTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR GCA 90 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTGCAAACTTCAGCACACTCCCCTCCAACTCTTTaGACACAGCTCCTGGCGGCT | + |
Preference number: 2 (lower is better) Translates to: AHKFKTLGRLCTLQTSAHSPPTL*TQLLAA Trigger: AGCCGCCAGGAGCTGTGTGCAAAGAGTTGGAGGGGA...GTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTGCAAACTTCAGCACACGAGTGGAGACTGCAGTaGGTAGAGGGTTCTGGGCCT | + |
Preference number: 2 (lower is better) Translates to: AHKFKTLGRLCTLQTSAHEWRLQ*VEGSGP Trigger: AGGCCCAGAACCCTCTACCCACTGCAGTCTCCACTC...GTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGGAAAACAGTGGGAAGTaGTTGGTACCCTTCAAAAAG | + |
Preference number: 2 (lower is better) Translates to: QARPVRPLEVEKLIAVSVENSGK*LVPFKK Trigger: CTTTTTGAAGGGTACCAACCACTTCCCACTGTTTTC...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | ATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGGTGTCCTATGGCTCATaGAGACCTGAGGTTTGCTTT | + |
Preference number: 2 (lower is better) Translates to: ILEPRRDLRKFSIRECGTVSYGS*RPEVCF Trigger: AAAGCAAACCTCAGGTCTCCATGAGCCATAGGACAC...CGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | GGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGTAGTGCTGGAGTTTGAACCCTaGGACCTTAGCACATTAAGC | + |
Preference number: 2 (lower is better) Translates to: GAKTRFEKVFHPRMWHVVLEFEP*DLSTLS Trigger: GCTTAATGTGCTAAGGTCCCAGGGTTCAAACTCCAG...CACTACGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CCA 90 bp | CTTGGGGGAGGTAGCATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCAATACTGGAATGGGATaGGAGCTCTCTGTAATCAGA | + |
Preference number: 2 (lower is better) Translates to: LGGGSILEPRRDLRKFSINTGMG*ELSVIR Trigger: TCTGATTACAGAGAGCTCCCATCCCATTCCAGTATT...GATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGATGCTACCTCCCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | GACTCAGGACCCGCCCCCATCCCTGAGAGCGCCCATTaGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCC | + |
Preference number: 3 (lower is better) Translates to: DSGPAPIPESAH*PAPPAPGQARP Trigger: GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGGGGGCGGGTCCTGAGTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGGAGTCCCCTAGCCCTTaGCCCTGCCCCTACCAGATC | + |
Preference number: 3 (lower is better) Translates to: WGRLGGGACRLLPPCLRVESPSP*PCPYQI Trigger: GATCTGGTAGGGGCAGGGCAAAGGGCTAGGGGACTC...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 72 bp | AGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTaGCTGCGGGTGGGCCAGGAAGACCCGCCATTAGCA | + |
Preference number: 3 (lower is better) Translates to: RLGGGACRLLPP*LRVGQEDPPLA Trigger: TGCTAATGGCGGGTCTTCCTGGCCCACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 72 bp | GGGTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATaGACCCTGGGTGGGCGTGGGGGAGGCTTGGGGGAG | + |
Preference number: 3 (lower is better) Translates to: GLTCGSFCVGGS*TLGGRGGGLGE Trigger: CTCCCCCAAGCCTCCCCCACGCCCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | AGCGCATGCGTGCAGTTGCAGGCACCCTGGCGGCCGTaGGGAAAAGGGAGACCAGGACCTGGCTCTCCCTCC | + |
Preference number: 3 (lower is better) Translates to: SACVQLQAPWRP*GKGRPGPGSPS Trigger: GGAGGGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAACTGCACGCATGCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | GCGTCATGCAGCGCATGCGTGCAGTTGCAGGCACCCTaGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGC | + |
Preference number: 3 (lower is better) Translates to: ASCSACVQLQAP*RPWGKGRPGPG Trigger: GCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAACTGCACGCATGCGCTGCATGACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 72 bp | GAGGGAGCAGATCCCTGGAGGCGGGCGTGGGTGGAATaGACCAGCTGGCGTCCTCCAAGCCCAAGAGCAGCT | + |
Preference number: 3 (lower is better) Translates to: EGADPWRRAWVE*TSWRPPSPRAA Trigger: AGCTGCTCTTGGGCTTGGAGGACGCCAGCTGGTGCATTCCACCCACGCCCGCCTCCAGGGATCTGCTCCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCAGGGGTTGCTGGAGTTaGAACCCTGGGACCTTAGCA | + |
Preference number: 3 (lower is better) Translates to: IPESAHWPAPPAPGQARPRGCWS*NPGTLA Trigger: TGCTAAGGTCCCAGGGTTCAAACTCCAGCAACCCCT...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | CCATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCAGGGGTTGCTGGAGTTaGAACCCTGGGACCTTAGCA | + |
Preference number: 3 (lower is better) Translates to: PSLRAPIGQPLPRQVRLGRGCWS*NPGTLA Trigger: TGCTAAGGTCCCAGGGTTCAAACTCCAGCAACCCCT...GCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGGAAGGAGAGGAGCCATaGAGCTCAGAAAGACCCCCT | + |
Preference number: 3 (lower is better) Translates to: WGRLGGGACRLLPPCLRVEGEEP*SSERPP Trigger: AGGGGGTCTTTCTGAGCTCAATGGCTCCTCTCCTTC...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | CACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTaGGGGGAAGGGACAGGGGGAACCCGAGGGTCTCGC | + |
Preference number: 3 (lower is better) Translates to: HNAAQAAGLLVT*GEGTGGTRGSR Trigger: GCGAGACCCTCGGGTTCCCCCTGTCCCTTCCCCCCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
3UTR CCA 72 bp | GCCAAGTCCATGCAGCGAATAGAGGGAGCAGATCCCTaGAGGCGGGCGTGGGTGGAATGCACCAGCTGGCGT | + |
Preference number: 3 (lower is better) Translates to: AKSMQRIEGADP*RRAWVECTSWR Trigger: ACGCCAGCTGGTGCATTCCACCCACGCCCGCCTCCAGGGATCTGCTCCCTCTATTCGCTGCATGGACTTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCGGTCGTCTGTGCACTTaGCAAACTTCAGCACACGAA | + |
Preference number: 3 (lower is better) Translates to: VAGTLAAVGKRETRTWLSGRLCT*QTSAHE Trigger: TTCGTGTGCTGAAGTTTGCAAAGTGCACAGACGACC...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR TCA 72 bp | AATTGGGCCCAAGGACACCCCCACCGACAACTCTGGTaGCAGCGGGAGGTTTCCCTGAGGCGGTGGGAACAA | + |
Preference number: 3 (lower is better) Translates to: NWAQGHPHRQLW*QREVSLRRWEQ Trigger: TTGTTCCCACCGCCTCAGGGAAACCTCCCGCTGTCACCAGAGTTGTCGGTGGGGGTGTCCTTGGGCCCAATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 72 bp | GTCTTAGACTTGCTTTCAGTGGCAACACCCAACTGCTaGGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTG | + |
Preference number: 3 (lower is better) Translates to: VLDLLSVATPNC*AARTHQPGVSL Trigger: CAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGTGTTGCCACTGAAAGCAAGTCTAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR TCA 72 bp | AGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTaGCAAGAGCTGGGGACAGAAATACAGAGAGTCAAG | + |
Preference number: 3 (lower is better) Translates to: RGNPRVSRGLRR*QELGTEIQRVK Trigger: CTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
3UTR CCA 72 bp | AGAGTGGAGACTGCAGTGGGTAGAGGGTTCTGGGCCTaGAGGGCCAAGTCCATGCAGCGAATAGAGGGAGCA | + |
Preference number: 3 (lower is better) Translates to: RVETAVGRGFWA*RAKSMQRIEGA Trigger: TGCTCCCTCTATTCGCTGCATGGACTTGGCCCTCCAGGCCCAGAACCCTCTACCCACTGCAGTCTCCACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGCTCCCCTCCAACTCTTaGCACACAGCTCCTGGCGGC | + |
Preference number: 3 (lower is better) Translates to: QARPVRPLEVEKLIAVSVLPSNS*HTAPGG Trigger: GCCGCCAGGAGCTGTGTGCAAAGAGTTGGAGGGGAG...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | CCATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCAATAAGTTGAATCCTTaGGCAATATTAGGAGTCCTC | + |
Preference number: 3 (lower is better) Translates to: PSLRAPIGQPLPRQVRLGNKLNP*AILGVL Trigger: GAGGACTCCTAATATTGCCAAAGGATTCAACTTATT...GCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR TCA 72 bp | CCAACTCTTTGCACACAGCTCCTGGCGGCTTATTGCTaGAGAGGGGGTCGGGGAGGCATGCAAACTGGAGTG | + |
Preference number: 3 (lower is better) Translates to: PTLCTQLLAAYC*RGGRGGMQTGV Trigger: CACTCCAGTTTGCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGTGTGCAAAGAGTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | CTAGTCTCACCTCTTGGGATAGAGTGGAGACTGCAGTaGGTAGAGGGTTCTGGGCCTGGAGGGCCAAGTCCA | + |
Preference number: 3 (lower is better) Translates to: LVSPLGIEWRLQ*VEGSGPGGPSP Trigger: TGGACTTGGCCCTCCAGGCCCAGAACCCTCTACCCACTGCAGTCTCCACTCTATCCCAAGAGGTGAGACTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | CGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTaGGGACAGAAATACAGAGAGTCAAGGATGGGGGAT | + |
Preference number: 3 (lower is better) Translates to: RGSREVSGGDKS*GQKYRESRMGD Trigger: ATCCCCCATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
3UTR CCA 72 bp | TCCTTTGGCAATATTAGGAGTCCTCAGCCCATACCCTaGTGTCTAGAGTCCCCTAGCCCTTTGCCCTGCCCC | + |
Preference number: 3 (lower is better) Translates to: SFGNIRSPQPIP*CLESPSPLPCP Trigger: GGGGCAGGGCAAAGGGCTAGGGGACTCTAGACACCAGGGTATGGGCTGAGGACTCCTAATATTGCCAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | ATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGCTCCCCTCCAACTCTTaGCACACAGCTCCTGGCGGC | + |
Preference number: 3 (lower is better) Translates to: ILEPRRDLRKFSIRECGTLPSNS*HTAPGG Trigger: GCCGCCAGGAGCTGTGTGCAAAGAGTTGGAGGGGAG...CGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | AAGTCTAGGGTACTAGTCTCACCTCTTGGGATAGAGTaGAGACTGCAGTGGGTAGAGGGTTCTGGGCCTGGA | + |
Preference number: 3 (lower is better) Translates to: KSRVLVSPLGIE*RLQWVEGSGPG Trigger: TCCAGGCCCAGAACCCTCTACCCACTGCAGTCTCCACTCTATCCCAAGAGGTGAGACTAGTACCCTAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCGGCAATGTCAGGGTCTaGAGGACTGTCAGAACCCCG | + |
Preference number: 3 (lower is better) Translates to: NVPCIGIVASRIGPKDTPGNVRV*RTVRTP Trigger: CGGGGTTCTGACAGTCCTCAAGACCCTGACATTGCC...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 72 bp | GGGAGGGACTCAAAATGTCCCTTGCATAGGAATTGTTaGATCAAGAATTGGGCCCAAGGACACCCCCACCGA | + |
Preference number: 3 (lower is better) Translates to: GRDSKCPLHRNC*IKNWAQGHPHR Trigger: TCGGTGGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATTTTGAGTCCCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | GGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGTAGTGGTAGGGGAAGAGGGGTaGCTGGAGTTTGAACCCTGG | + |
Preference number: 3 (lower is better) Translates to: GAKTRFEKVFHPRMWHVVVGEEG*LEFEPW Trigger: CCAGGGTTCAAACTCCAGCAACCCCTCTTCCCCTAC...CACTACGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | AAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTaGCACGTAGTGGGCAAGGAAGCTGGGAAGGGCAGG | + |
Preference number: 3 (lower is better) Translates to: KTRFEKVFHPRM*HVVGKEAGKGR Trigger: CCTGCCCTTCCCAGCTTCCTTGCCCACTACGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 72 bp | CACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTaGAAACTTCAGCACACGAAGAGGGAACGGGAGTCC | + |
Preference number: 3 (lower is better) Translates to: HTSLKHLVVCAL*KLQHTKRERES Trigger: GGACTCCCGTTCCCTCTTCGTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR CCA 72 bp | AGATGGAATCAGCTTTTAGTTATTTACAGGAGTCGATaGGAGGGGTGTCCTATGGCTCATGGAGACCTGAGG | + |
Preference number: 3 (lower is better) Translates to: RWNQLLVIYRSR*EGCPMAHGDLR Trigger: CCTCAGGTCTCCATGAGCCATAGGACACCCCTCCCATCGACTCCTGTAAATAACTAAAAGCTGATTCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR-3UTR CAA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCACAAGTTTAAAACACTaGGTCGTCTGTGCACTTTGC | + |
Preference number: 3 (lower is better) Translates to: NVPCIGIVASRIGPKDTPTSLKH*VVCALC Trigger: GCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGT...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
3UTR GCA 72 bp | CAAAGAGCACACAAGTTTAAAACACTTGGTCGTCTGTaGACTTTGCAAACTTCAGCACACGAAGAGGGAACG | + |
Preference number: 3 (lower is better) Translates to: QRAHKFKTLGRL*TLQTSAHEEGT Trigger: CGTTCCCTCTTCGTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGCTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | CGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGGGCGTTGGCACCGGCTaGGGCTGCTGCTTGCCGGTC | + |
Preference number: 4 (lower is better) Translates to: RGGGLGEEPADSFLPACGGVGTG*GCCLPV Trigger: GACCGGCAAGCAGCAGCCTCAGCCGGTGCCAACGCC...CCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGGCTGAGGCTGCTGCTTaGCGGTCCCCTGGCGCCCGC | + |
Preference number: 4 (lower is better) Translates to: WGRLGGGACRLLPPCLRVAEAAA*RSPGAR Trigger: GCGGGCGCCAGGGGACCGGCAAGCAGCAGCCTCAGC...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCGCGGCAGTGCCGGGCTaGGAGCACTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: IPESAHWPAPPAPGQARPAAVPG*EHCCCC Trigger: GCAGCAGCAGCAGTGCTCTCAGCCCGGCACTGCCGC...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CCATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCTCAGCCCGGCCAGTCTaGTCCCTGGCAGGGTGCGCA | + |
Preference number: 4 (lower is better) Translates to: PSLRAPIGQPLPRQVRLGSARPV*SLAGCA Trigger: TGCGCACCCTGCCAGGGACCAGACTGGCCGGGCTGA...GCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGGGCGTTGGCACCGGCTaGGGCTGCTGCTTGCCGGTC | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSGVGTG*GCCLPV Trigger: GACCGGCAAGCAGCAGCCTCAGCCGGTGCCAACGCC...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR GCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCTCCAGTCCCGCATCGTaGGCGCCTCCGGCGTTGGCG | + |
Preference number: 4 (lower is better) Translates to: VAGTLAAVGKRETRTWLSSSPAS*APPALA Trigger: CGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGA...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCTCCAGTCCCGCATCGTaGGCGCCTCCGGCGTTGGCG | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLSSPAS*APPALA Trigger: CGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGA...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGCTTGCCGGTCCCCTaGCGCCCGCGGAACGACCAG | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSCLPVP*RPRNDQ Trigger: CTGGTCGTTCCGCGGGCGCCAGGGGACCGGCAAGCA...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | ACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACTGGCCCGGAGCGTGTaGCCCAGCACACGCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: TGGTRGSREVSGGDKSWGLARSV*PSTRSP Trigger: GGGGCTGCGTGTGCTGGGCCACACGCTCCGGGCCAG...TCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGGCAGGGCAGTCCTCATaGGCCAGTGCGGCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: WGRLGGGACRLLPPCLRVAGQSS*ASAAAA Trigger: TGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGC...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGGCGTTGGCACCGGCTaGGGCTGCTGCTTGCCGGTC | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRGVGTG*GCCLPV Trigger: GACCGGCAAGCAGCAGCCTCAGCCGGTGCCAACGCC...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGCGGCAGAGGCGGCGGTaGGGACTCAGGCGGCTGCGG | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLRQRRR*GLRRLR Trigger: CCGCAGCCGCCTGAGTCCTCACCGCCGCCTCTGCCG...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGCGGCAGTGCCGGGCTaGGAGCACTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRAAVPG*EHCCCC Trigger: GCAGCAGCAGCAGTGCTCTCAGCCCGGCACTGCCGC...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | CCATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCGAGGAGGCAATCCCATaGTTCCCAGGCCCCCAGCAC | + |
Preference number: 4 (lower is better) Translates to: PSLRAPIGQPLPRQVRLGEEAIP*FPGPQH Trigger: GTGCTGGGGGCCTGGGAATCATGGGATTGCCTCCTC...GCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACGCTGAGGCTGCTGCTTaGCGGTCCCCTGGCGCCCGC | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNAEAAA*RSPGAR Trigger: GCGGGCGCCAGGGGACCGGCAAGCAGCAGCCTCAGC...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR GCA 90 bp | AAGGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGCTGAGGCTGCTGCTTaGCGGTCCCCTGGCGCCCGC | + |
Preference number: 4 (lower is better) Translates to: KGQGEPEGLARSQAVTRAAEAAA*RSPGAR Trigger: GCGGGCGCCAGGGGACCGGCAAGCAGCAGCCTCAGC...AGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTTCCAGTCCCGCATCGTaGGCGCCTCCGGCGTTGGCG | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRSSPAS*APPALA Trigger: CGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGA...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGCCCGGAGCGTGTaGCCCAGCACACGCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNLARSV*PSTRSP Trigger: GGGGCTGCGTGTGCTGGGCCACACGCTCCGGGCCAG...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCATGCCACCGCTGCCGTaGTGGGGGTGTGGTGGGGGT | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLMPPLP*WGCGGG Trigger: ACCCCCACCACACCCCCACCACGGCAGCGGTGGCAT...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CCATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCGGGCTCACCAGGGGCTaGCAGAGGAGGCAATCCCAT | + |
Preference number: 4 (lower is better) Translates to: PSLRAPIGQPLPRQVRLGGLTRG*QRRQSH Trigger: ATGGGATTGCCTCCTCTGCCAGCCCCTGGTGAGCCC...GCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | TTTGCACACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGGAGGCATGCCGGCAGAGGCGGCGGTaGGGACTCAGGCGGCTGCGG | + |
Preference number: 4 (lower is better) Translates to: FAHSSWRLIAEEGVGEACRQRRR*GLRRLR Trigger: CCGCAGCCGCCTGAGTCCTCACCGCCGCCTCTGCCG...GCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGTGTGCAAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | GCCTGGAGGGCCAAGTCCATGCAGCGAATAGAGGGAGCAGATCCCTGGAGGCGGGCGGCAGTGCCGGGCTaGGAGCACTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: AWRAKSMQRIEGADPWRRAAVPG*EHCCCC Trigger: GCAGCAGCAGCAGTGCTCTCAGCCCGGCACTGCCGC...CCGCCTCCAGGGATCTGCTCCCTCTATTCGCTGCATGGACTTGGCCCTCCAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGCTTGCAGTAGTTGGGTaGGCCAGGCTGCGGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSLAVVG*ARLRGP Trigger: AGGCCCCCGCAGCCTGGCTCACCCAACTACTGCAAG...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCCTTGCAGTAGTTGGGTaGGCCAGGCTGCGGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLLAVVG*ARLRGP Trigger: AGGCCCCCGCAGCCTGGCTCACCCAACTACTGCAAG...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | GGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGCTTGCAGTAGTTGGGTaGGCCAGGCTGCGGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: GQGEPEGLARSQAVTRAGLAVVG*ARLRGP Trigger: AGGCCCCCGCAGCCTGGCTCACCCAACTACTGCAAG...CCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACTGCTTGCCGGTCCCCTaGCGCCCGCGGAACGACCAG | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNCLPVP*RPRNDQ Trigger: CTGGTCGTTCCGCGGGCGCCAGGGGACCGGCAAGCA...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGCTGGCCCGGAGCGTGTaGCCCAGCACACGCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLLARSV*PSTRSP Trigger: GGGGCTGCGTGTGCTGGGCCACACGCTCCGGGCCAG...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCGCAGGGCAGTCCTCATaGGCCAGTGCGGCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: VAGTLAAVGKRETRTWLSAGQSS*ASAAAA Trigger: TGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGC...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGCAGGGCAGTCCTCATaGGCCAGTGCGGCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLAGQSS*ASAAAA Trigger: TGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGC...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCCTGGCAGGGCAGTCCTCATaGGCCAGTGCGGCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: GTGGTRGSREVSGGDKSLAGQSS*ASAAAA Trigger: TGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGC...CAGGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
3UTR CAA 72 bp | CGGGTGGGCCAGGAAGACCCGCCATTAGCACCAGAGTaGCAGACCTCCCCTCCCCCAGACTCAGGACCCGCC | + |
Preference number: 4 (lower is better) Translates to: RVGQEDPPLAPE*QTSPPPDSGPA Trigger: GGCGGGTCCTGAGTCTGGGGGAGGGGAGGTCTGCAACTCTGGTGCTAATGGCGGGTCTTCCTGGCCCACCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | CCTCTTTGCCCACCAGTAGGGGAAGAGGGGTTGCTGGAGTTTGAACCCTGGGACCGGCAGAGGCGGCGGTaGGGACTCAGGCGGCTGCGG | + |
Preference number: 4 (lower is better) Translates to: PLCPPVGEEGLLEFEPWDRQRRR*GLRRLR Trigger: CCGCAGCCGCCTGAGTCCTCACCGCCGCCTCTGCCG...GTCCCAGGGTTCAAACTCCAGCAACCCCTCTTCCCCTACTGGTGGGCAAAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | AGCCCAGTGTCTCTAGGACACTCCCTCCCACCATTCCCAGTTGCTAACCTGGGGCGGCAGAGGCGGCGGTaGGGACTCAGGCGGCTGCGG | + |
Preference number: 4 (lower is better) Translates to: SPVSLGHSLPPFPVANLGRQRRR*GLRRLR Trigger: CCGCAGCCGCCTGAGTCCTCACCGCCGCCTCTGCCG...CCCCAGGTTAGCAACTGGGAATGGTGGGAGGGAGTGTCCTAGAGACACTGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCCCACCTCCACGTTGGTaGTATTCTCCGGGGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: VAGTLAAVGKRETRTWLSPPPRW*YSPGEP Trigger: GGGCTCCCCCGGAGAATATCACCAACGTGGAGGTGG...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCCCACCTCCACGTTGGTaGTATTCTCCGGGGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLPPPRW*YSPGEP Trigger: GGGCTCCCCCGGAGAATATCACCAACGTGGAGGTGG...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGCCACCTCCACGTTGGTaGTATTCTCCGGGGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSPPPRW*YSPGEP Trigger: GGGCTCCCCCGGAGAATATCACCAACGTGGAGGTGG...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | GGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCCTGGAGGAGGCAATCCCATaGTTCCCAGGCCCCCAGCAC | + |
Preference number: 4 (lower is better) Translates to: GTGGTRGSREVSGGDKSLEEAIP*FPGPQH Trigger: GTGCTGGGGGCCTGGGAATCATGGGATTGCCTCCTC...CAGGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR CCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACTCAGCCCGGCCAGTCTaGTCCCTGGCAGGGTGCGCA | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNSARPV*SLAGCA Trigger: TGCGCACCCTGCCAGGGACCAGACTGGCCGGGCTGA...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCCGAAGGCCACATACCTaGCAGCCCGCGACGAGTAGG | + |
Preference number: 4 (lower is better) Translates to: VAGTLAAVGKRETRTWLSRRPHT*QPATSR Trigger: CCTACTCGTCGCGGGCTGCCAGGTATGTGGCCTTCG...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGCGAAGGCCACATACCTaGCAGCCCGCGACGAGTAGG | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSRRPHT*QPATSR Trigger: CCTACTCGTCGCGGGCTGCCAGGTATGTGGCCTTCG...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACATGCCACCGCTGCCGTaGTGGGGGTGTGGTGGGGGT | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNMPPLP*WGCGGG Trigger: ACCCCCACCACACCCCCACCACGGCAGCGGTGGCAT...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGTGTGTGGGGTCCAGGTaGGTAGGCCCCGGCCACATT | + |
Preference number: 4 (lower is better) Translates to: GQGEPEGLARSQAVTRAGCVGSR*VGPGHI Trigger: AATGTGGCCGGGGCCTACCCACCTGGACCCCACACA...CCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGCAGGGCAGTCCTCATaGGCCAGTGCGGCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRAGQSS*ASAAAA Trigger: TGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGC...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGGCTGGCTGGTCGATaGCAGGGCAGTCCTCATGGG | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSWLAGR*QGSPHG Trigger: CCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCA...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGGCACGCCGCCCACGTTaGTCACGATCTTACCGCTGT | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSARRPR*SRSYRC Trigger: ACAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGC...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGAGGAGGCAATCCCATaGTTCCCAGGCCCCCAGCAC | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSREEAIP*FPGPQH Trigger: GTGCTGGGGGCCTGGGAATCATGGGATTGCCTCCTC...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | ACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGAGAGGAGGCAATCCCATaGTTCCCAGGCCCCCAGCAC | + |
Preference number: 4 (lower is better) Translates to: TGGTRGSREVSGGDKSWGEEAIP*FPGPQH Trigger: GTGCTGGGGGCCTGGGAATCATGGGATTGCCTCCTC...TCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACGTCCTCATGGGCCAGTaGGGCTGCTGCAGGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNVLMGQ*GCCRVS Trigger: GGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGAC...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR GCA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGGTCCTCATGGGCCAGTaGGGCTGCTGCAGGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWVLMGQ*GCCRVS Trigger: GGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGAC...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR GCA 90 bp | AAGGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGTCCTCATGGGCCAGTaGGGCTGCTGCAGGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: KGQGEPEGLARSQAVTRAVLMGQ*GCCRVS Trigger: GGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGAC...AGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGGGGGGATATCCAGGCTaGTGCGTTGGCGTTGAGGTC | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSGGYPG*CVGVEV Trigger: GACCTCAACGCCAACGCAGCAGCCTGGATATCCCCC...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGTCAGCCCGGCCAGTCTaGTCCCTGGCAGGGTGCGCA | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLSARPV*SLAGCA Trigger: TGCGCACCCTGCCAGGGACCAGACTGGCCGGGCTGA...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTCAGGCTTGCAGTAGTTaGGTGAGCCAGGCTGCGGGG | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRQACSS*VSQAAG Trigger: CCCCGCAGCCTGGCTCACCCAACTACTGCAAGCCTG...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | ACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGCAAAGAGCTGTGTGGGGTCCAGGTaGGTAGGCCCCGGCCACATT | + |
Preference number: 4 (lower is better) Translates to: TQLLRCQDAPAGCEPAKSCVGSR*VGPGHI Trigger: AATGTGGCCGGGGCCTACCCACCTGGACCCCACACA...GCTCTTTGCAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTTGTGTGGGGTCCAGGTaGGTAGGCCCCGGCCACATT | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRCVGSR*VGPGHI Trigger: AATGTGGCCGGGGCCTACCCACCTGGACCCCACACA...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | AAGGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGCAGGGCAGTCCTCATaGGCCAGTGCGGCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: KGQGEPEGLARSQAVTRAAGQSS*ASAAAA Trigger: TGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGC...AGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCCGTAACCTTTTCGGATaGAGCCATCAGGGGAAGGGG | + |
Preference number: 4 (lower is better) Translates to: IPESAHWPAPPAPGQARPRNLFG*SHQGKG Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGGTTACG...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGGTCGGGCAAGAAGCTTaGGGGGCCTGGCTTATGCCA | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSVGQEA*GAWLMP Trigger: TGGCATAAGCCAGGCCCCCCAAGCTTCTTGCCCGAC...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR TCA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGCCTCCGCCCGCGTCCTaGAAACACAGACGCTTGAGC | + |
Preference number: 4 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWPPPAS*KHRRLS Trigger: GCTCAAGCGTCTGTGTTTTCAGGACGCGGGCGGAGG...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGGAGGAGGCAATCCCATaGTTCCCAGGCCCCCAGCAC | + |
Preference number: 4 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWEEAIP*FPGPQH Trigger: GTGCTGGGGGCCTGGGAATCATGGGATTGCCTCCTC...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | ACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACCCGGCTTCCGGGAGTaGTTGGGCTCTTGTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: TGGTRGSREVSGGDKSWGPGFRE*LGSCLL Trigger: CAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGG...TCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGTCCTCATGGGCCAGTaGGGCTGCTGCAGGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLVLMGQ*GCCRVS Trigger: GGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGAC...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CCTCTTTGCCCACCAGTAGGGGAAGAGGGGTTGCTGGAGTTTGAACCCTGGGACTGCTTGCCGGTCCCCTaGCGCCCGCGGAACGACCAG | + |
Preference number: 4 (lower is better) Translates to: PLCPPVGEEGLLEFEPWDCLPVP*RPRNDQ Trigger: CTGGTCGTTCCGCGGGCGCCAGGGGACCGGCAAGCA...GTCCCAGGGTTCAAACTCCAGCAACCCCTCTTCCCCTACTGGTGGGCAAAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATATGCCACCGCTGCCGTaGTGGGGGTGTGGTGGGGGT | + |
Preference number: 4 (lower is better) Translates to: EPEGLARSQAVTRAGDRNMPPLP*WGCGGG Trigger: ACCCCCACCACACCCCCACCACGGCAGCGGTGGCAT...ATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGTGTGTGGGGTCCAGGTaGGTAGGCCCCGGCCACATT | + |
Preference number: 4 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWCVGSR*VGPGHI Trigger: AATGTGGCCGGGGCCTACCCACCTGGACCCCACACA...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGGGGCTCACCAGGGGCTaGCAGAGGAGGCAATCCCAT | + |
Preference number: 4 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWGLTRG*QRRQSH Trigger: ATGGGATTGCCTCCTCTGCCAGCCCCTGGTGAGCCC...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGGCTTCCGGGAGTGATTaGGCTCTTGTCTTCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: WGRLGGGACRLLPPCLRVASGSD*ALVFWR Trigger: TCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGC...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCCAGTGGCTTTTCGGATaGAGCCATCAGGGGAAGGGG | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLQWLFG*SHQGKG Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGCCACTG...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR CCA 90 bp | ACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACTGCAGGGTCTCCATTaGGACGGGGGTCTCCTTCCT | + |
Preference number: 4 (lower is better) Translates to: TGGTRGSREVSGGDKSWGLQGLH*DGGLLP Trigger: AGGAAGGAGACCCCCGTCCCAATGGAGACCCTGCAG...TCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | CCTAAAAATGCTAGCTCCGACCTTAGAGGCTCCCAGCAGCCTCCCCTCCAACTCGGCGTTGGCACCGGCTaGGGCTGCTGCTTGCCGGTC | + |
Preference number: 4 (lower is better) Translates to: PKNASSDLRGSQQPPLQLGVGTG*GCCLPV Trigger: GACCGGCAAGCAGCAGCCTCAGCCGGTGCCAACGCC...GAGTTGGAGGGGAGGCTGCTGGGAGCCTCTAAGGTCGGAGCTAGCATTTTTAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | CGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGGGCGTTGGCACCGGCTaGGGCTGCTGCTTGCCGGTC | + |
Preference number: 4 (lower is better) Translates to: REVSGGDKSWGQKYRESRGVGTG*GCCLPV Trigger: GACCGGCAAGCAGCAGCCTCAGCCGGTGCCAACGCC...CCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | CGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGGCGGCAGTGCCGGGCTaGGAGCACTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: REVSGGDKSWGQKYRESRAAVPG*EHCCCC Trigger: GCAGCAGCAGCAGTGCTCTCAGCCCGGCACTGCCGC...CCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCCCGGCTTCCGGGAGTaGTTGGGCTCTTGTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNPGFRE*LGSCLL Trigger: CAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGG...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGCCCGGCTTCCGGGAGTaGTTGGGCTCTTGTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWPGFRE*LGSCLL Trigger: CAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGG...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGCTGCGTTGGCGTTaGGGTCGGGCAAGAAGCTTG | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNLLRWR*GRARSL Trigger: CAAGCTTCTTGCCCGACCTCAACGCCAACGCAGCAG...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR GCA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGGGATATCCAGGCTGCTaGGTTGGCGTTGAGGTCGGG | + |
Preference number: 4 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWGYPGC*VGVEVG Trigger: CCCGACCTCAACGCCAACGCAGCAGCCTGGATATCC...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR GCA 90 bp | AAGGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGGATATCCAGGCTaGTGCGTTGGCGTTGAGGTC | + |
Preference number: 4 (lower is better) Translates to: KGQGEPEGLARSQAVTRAGGYPG*CVGVEV Trigger: GACCTCAACGCCAACGCAGCAGCCTGGATATCCCCC...AGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGCGAAGGCCACATACCTaGCAGCCCGCGACGAGTAGG | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLRRPHT*QPATSR Trigger: CCTACTCGTCGCGGGCTGCCAGGTATGTGGCCTTCG...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCAAACTCCACCTTATCTaGGCAGAAGGTGACCCGCAT | + |
Preference number: 4 (lower is better) Translates to: IPESAHWPAPPAPGQARPKLHLI*AEGDPH Trigger: ATGCGGGTCACCTTCTGCCCAGATAAGGTGGAGTTT...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGCAGGCTTGCAGTAGTTaGGTGAGCCAGGCTGCGGGG | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLQACSS*VSQAAG Trigger: CCCCGCAGCCTGGCTCACCCAACTACTGCAAGCCTG...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGTGTGTGGGGTCCAGGTaGGTAGGCCCCGGCCACATT | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLCVGSR*VGPGHI Trigger: AATGTGGCCGGGGCCTACCCACCTGGACCCCACACA...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGGGCTCACCAGGGGCTaGCAGAGGAGGCAATCCCAT | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLGLTRG*QRRQSH Trigger: ATGGGATTGCCTCCTCTGCCAGCCCCTGGTGAGCCC...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGTGGCTGGCTGGTCGATaGCAGGGCAGTCCTCATGGG | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLWLAGR*QGSPHG Trigger: CCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCA...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCTGGGCTCTTGTCTTCTaGAGACATGGCTGGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLWALVF*RHGWLV Trigger: GACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCA...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCCTGTGGGCTCTTGTCTTCTaGAGACATGGCTGGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: GTGGTRGSREVSGGDKSLWALVF*RHGWLV Trigger: GACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCA...CAGGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR CCA 90 bp | GTGGCAACACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGCGTAACCTTTTCGGATaGAGCCATCAGGGGAAGGGG | + |
Preference number: 4 (lower is better) Translates to: VATPNCCAARTHQPGVSLRNLFG*SHQGKG Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGGTTACG...CAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGTGTTGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCCAAGAGCTTTTCGGATaGAGCCATCAGGGGAAGGGG | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLQELFG*SHQGKG Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGCTCTTG...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR TCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGCACGCCGCCCACGTTaGTCACGATCTTACCGCTGT | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLARRPR*SRSYRC Trigger: ACAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGC...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR GCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGGCTGAGGCTGCTGCTTaGCGGTCCCCTGGCGCCCGC | + |
Preference number: 4 (lower is better) Translates to: QARPVRPLEVEKLIAVSVAEAAA*RSPGAR Trigger: GCGGGCGCCAGGGGACCGGCAAGCAGCAGCCTCAGC...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | GCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATCCAGTCCCGCATCGTaGGCGCCTCCGGCGTTGGCG | + |
Preference number: 4 (lower is better) Translates to: ARSQAVTRAGDRNTESQGSSPAS*APPALA Trigger: CGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGA...TCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCCAATGCTGCTCAGGCTaGGGGACTTCTCGTAACCTT | + |
Preference number: 4 (lower is better) Translates to: VAGTLAAVGKRETRTWLSQCCSG*GTSRNL Trigger: AAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTG...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | TTTGCACACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGGAGGCATGCCGCTCAGGCCCACAATaGTGCTCAGGCTGCGGGACT | + |
Preference number: 4 (lower is better) Translates to: FAHSSWRLIAEEGVGEACRSGPQ*CSGCGT Trigger: AGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCG...GCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGTGTGCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | ACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGGAGGCATGCAAACTGGCGCTCAGGCCCACAATaGTGCTCAGGCTGCGGGACT | + |
Preference number: 4 (lower is better) Translates to: TAPGGLLLKRGSGRHANWRSGPQ*CSGCGT Trigger: AGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCG...CCAGTTTGCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGCTGGCCCGGAGCGTGTaGCCCAGCACACGCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: QARPVRPLEVEKLIAVSVLARSV*PSTRSP Trigger: GGGGCTGCGTGTGCTGGGCCACACGCTCCGGGCCAG...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | TTTGCACACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGGAGGCATGCTGGCTGGCTGGTCGATaGCAGGGCAGTCCTCATGGG | + |
Preference number: 4 (lower is better) Translates to: FAHSSWRLIAEEGVGEACWLAGR*QGSPHG Trigger: CCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCA...GCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGTGTGCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GTTGCAGGCACCCTGGCGGCCGTGGGGAAAAGGGAGACCAGGACCTGGCTCTCCGCTTCCGGGAGTGATTaGGCTCTTGTCTTCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: VAGTLAAVGKRETRTWLSASGSD*ALVFWR Trigger: TCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGC...GGAGAGCCAGGTCCTGGTCTCCCTTTTCCCCACGGCCGCCAGGGTGCCTGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGGCTTCCGGGAGTGATTaGGCTCTTGTCTTCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSASGSD*ALVFWR Trigger: TCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGC...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCCTGGCTTCCGGGAGTGATTaGGCTCTTGTCTTCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: GTGGTRGSREVSGGDKSLASGSD*ALVFWR Trigger: TCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGC...CAGGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR TCA 90 bp | CCTAAAAATGCTAGCTCCGACCTTAGAGGCTCCCAGCAGCCTCCCCTCCAACTCCTTGCAGTAGTTGGGTaGGCCAGGCTGCGGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: PKNASSDLRGSQQPPLQLLAVVG*ARLRGP Trigger: AGGCCCCCGCAGCCTGGCTCACCCAACTACTGCAAG...GAGTTGGAGGGGAGGCTGCTGGGAGCCTCTAAGGTCGGAGCTAGCATTTTTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | CGTGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTTCTTTGGCAATTTCTaGTTGGCCATAGCCAGTGAA | + |
Preference number: 4 (lower is better) Translates to: RGGGLGEEPADSFLPACGFFGNF*LAIASE Trigger: TTCACTGGCTATGGCCAAGCAGAAATTGCCAAAGAA...CCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | CCTAAAAATGCTAGCTCCGACCTTAGAGGCTCCCAGCAGCCTCCCCTCCAACTCGTCCTCATGGGCCAGTaGGGCTGCTGCAGGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: PKNASSDLRGSQQPPLQLVLMGQ*GCCRVS Trigger: GGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGAC...GAGTTGGAGGGGAGGCTGCTGGGAGCCTCTAAGGTCGGAGCTAGCATTTTTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GTGGCAACACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGCAGGCTGCGGGGGCCTaGGAATATGTTTGTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: VATPNCCAARTHQPGVSLQAAGA*EYVCFS Trigger: AGAAAAACAAACATATTCCCAGGCCCCCGCAGCCTG...CAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGTGTTGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGTGGGGGAGCACCAGTaGCTTTTCGGATGGAGCCAT | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLVGEHQ*LFGWSH Trigger: ATGGCTCCATCCGAAAAGCCACTGGTGCTCCCCCAC...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS-3UTR GCA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGTTCTTTGGCAATTTCTaGTTGGCCATAGCCAGTGAA | + |
Preference number: 4 (lower is better) Translates to: WGRLGGGACRLLPPCLRVFFGNF*LAIASE Trigger: TTCACTGGCTATGGCCAAGCAGAAATTGCCAAAGAA...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | GGGAGGGTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATGCACCCTGGGTGGCAATGCTGCTCAGGCTaGGGGACTTCTCGTAACCTT | + |
Preference number: 4 (lower is better) Translates to: GRVDMRQLLRGWFMHPGWQCCSG*GTSRNL Trigger: AAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTG...CCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAACCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | ACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGGAGGCATGCAAACTGGTCAGGCCCACAATGCTaGTCAGGCTGCGGGACTTCT | + |
Preference number: 4 (lower is better) Translates to: TAPGGLLLKRGSGRHANWSGPQC*SGCGTS Trigger: AGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGA...CCAGTTTGCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTAGGACACTGCTTGCCGGTCCCCTaGCGCCCGCGGAACGACCAG | + |
Preference number: 4 (lower is better) Translates to: QTAGENLEGNGSPVSLGHCLPVP*RPRNDQ Trigger: CTGGTCGTTCCGCGGGCGCCAGGGGACCGGCAAGCA...GTGTCCTAGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | GAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGTCAGCCCGGCCAGTCTaGTCCCTGGCAGGGTGCGCA | + |
Preference number: 4 (lower is better) Translates to: EVSGGDKSWGQKYRESRMSARPV*SLAGCA Trigger: TGCGCACCCTGCCAGGGACCAGACTGGCCGGGCTGA...CATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAAACTCCACCTTATCTaGGCAGAAGGTGACCCGCAT | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRKLHLI*AEGDPH Trigger: ATGCGGGTCACCTTCTGCCCAGATAAGGTGGAGTTT...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CTTGGGGGAGGTAGCATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCTGGCCCGGAGCGTGTaGCCCAGCACACGCAGCCCC | + |
Preference number: 4 (lower is better) Translates to: LGGGSILEPRRDLRKFSILARSV*PSTRSP Trigger: GGGGCTGCGTGTGCTGGGCCACACGCTCCGGGCCAG...GATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGATGCTACCTCCCCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTCAGGCTGCGGGGGCCTaGGAATATGTTTGTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRQAAGA*EYVCFS Trigger: AGAAAAACAAACATATTCCCAGGCCCCCGCAGCCTG...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGATGCCACCGCTGCCGTaGTGGGGGTGTGGTGGGGGT | + |
Preference number: 4 (lower is better) Translates to: QARPVRPLEVEKLIAVSVMPPLP*WGCGGG Trigger: ACCCCCACCACACCCCCACCACGGCAGCGGTGGCAT...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGTGGGCTCTTGTCTTCTaGAGACATGGCTGGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLWALVF*RHGWLV Trigger: GACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCA...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGGCTTCCGGGAGTGATTaGGCTCTTGTCTTCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWASGSD*ALVFWR Trigger: TCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGC...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | AAGGGACAGGGGGAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGCTTCCGGGAGTGATTaGGCTCTTGTCTTCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: KGQGEPEGLARSQAVTRAASGSD*ALVFWR Trigger: TCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGC...AGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTCCCCCTGTCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGCAAGAGCTTTTCGGATaGAGCCATCAGGGGAAGGGG | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLQELFG*SHQGKG Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGCTCTTG...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
3UTR CAA 72 bp | CCCTCCAACTCTTTGCACACAGCTCCTGGCGGCTTATaGCTGAAGAGGGGGTCGGGGAGGCATGCAAACTGG | + |
Preference number: 4 (lower is better) Translates to: PSNSLHTAPGGL*LKRGSGRHANW Trigger: CCAGTTTGCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGTGTGCAAAGAGTTGGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | CCTAAAAATGCTAGCTCCGACCTTAGAGGCTCCCAGCAGCCTCCCCTCCAACTCCCCGGCTTCCGGGAGTaGTTGGGCTCTTGTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: PKNASSDLRGSQQPPLQLPGFRE*LGSCLL Trigger: CAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGG...GAGTTGGAGGGGAGGCTGCTGGGAGCCTCTAAGGTCGGAGCTAGCATTTTTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | ATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGGAGCACTGCTGCTGCTaGGGCGGCGGCAGAGGCGGC | + |
Preference number: 4 (lower is better) Translates to: ILEPRRDLRKFSIRECGTEHCCC*GGGRGG Trigger: GCCGCCTCTGCCGCCGCCGCAGCAGCAGCAGTGCTC...CGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCTCCAGTCCCGCATCGTaGGCGCCTCCGGCGTTGGCG | + |
Preference number: 4 (lower is better) Translates to: NVPCIGIVASRIGPKDTPSSPAS*APPALA Trigger: CGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGA...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCTGCTTGCCGGTCCCCTaGCGCCCGCGGAACGACCAG | + |
Preference number: 4 (lower is better) Translates to: NVPCIGIVASRIGPKDTPCLPVP*RPRNDQ Trigger: CTGGTCGTTCCGCGGGCGCCAGGGGACCGGCAAGCA...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GCCTGGAGGGCCAAGTCCATGCAGCGAATAGAGGGAGCAGATCCCTGGAGGCGGGTCTTGTTGCTGATGTaGATGAAGCCCTCGTGTGTC | + |
Preference number: 4 (lower is better) Translates to: AWRAKSMQRIEGADPWRRVLLLM*MKPSCV Trigger: GACACACGAGGGCTTCATCCACATCAGCAACAAGAC...CCGCCTCCAGGGATCTGCTCCCTCTATTCGCTGCATGGACTTGGCCCTCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GGGAGGGTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATGCACCCTGGGTGGAAACTCCACCTTATCTaGGCAGAAGGTGACCCGCAT | + |
Preference number: 4 (lower is better) Translates to: GRVDMRQLLRGWFMHPGWKLHLI*AEGDPH Trigger: ATGCGGGTCACCTTCTGCCCAGATAAGGTGGAGTTT...CCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAACCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACAAACTCCACCTTATCTaGGCAGAAGGTGACCCGCAT | + |
Preference number: 4 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNKLHLI*AEGDPH Trigger: ATGCGGGTCACCTTCTGCCCAGATAAGGTGGAGTTT...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | GTGATGGGAGCGGTGAAATGGGGGCAGCCAGAGACATCAAATATGGCAGGAGCTGGGCTCACCAGGGGCTaGCAGAGGAGGCAATCCCAT | + |
Preference number: 4 (lower is better) Translates to: VMGAVKWGQPETSNMAGAGLTRG*QRRQSH Trigger: ATGGGATTGCCTCCTCTGCCAGCCCCTGGTGAGCCC...AGCTCCTGCCATATTTGATGTCTCTGGCTGCCCCCATTTCACCGCTCCCATCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | AGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGGCCTCCGCCCGCGTCCTaGAAACACAGACGCTTGAGC | + |
Preference number: 4 (lower is better) Translates to: RSQAVTRAGDRNTESQGWPPPAS*KHRRLS Trigger: GCTCAAGCGTCTGTGTTTTCAGGACGCGGGCGGAGG...CCATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCTTCTTTGGCAATTTCTaGTTGGCCATAGCCAGTGAA | + |
Preference number: 4 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLFFGNF*LAIASE Trigger: TTCACTGGCTATGGCCAAGCAGAAATTGCCAAAGAA...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCTCAGCCCGGCCAGTCTaGTCCCTGGCAGGGTGCGCA | + |
Preference number: 4 (lower is better) Translates to: NVPCIGIVASRIGPKDTPSARPV*SLAGCA Trigger: TGCGCACCCTGCCAGGGACCAGACTGGCCGGGCTGA...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGCGAAGGCCACATACCTaGCAGCCCGCGACGAGTAGG | + |
Preference number: 4 (lower is better) Translates to: QARPVRPLEVEKLIAVSVRRPHT*QPATSR Trigger: CCTACTCGTCGCGGGCTGCCAGGTATGTGGCCTTCG...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGCGAAGGCCACATACCTaGCAGCCCGCGACGAGTAGG | + |
Preference number: 4 (lower is better) Translates to: EVSGGDKSWGQKYRESRMRRPHT*QPATSR Trigger: CCTACTCGTCGCGGGCTGCCAGGTATGTGGCCTTCG...CATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGTCTTGTTGCTGATGTaGATGAAGCCCTCGTGTGTC | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLVLLLM*MKPSCV Trigger: GACACACGAGGGCTTCATCCACATCAGCAACAAGAC...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGCAGGCTGCGGGGGCCTaGGAATATGTTTGTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLQAAGA*EYVCFS Trigger: AGAAAAACAAACATATTCCCAGGCCCCCGCAGCCTG...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CCA 90 bp | CCTCTTTGCCCACCAGTAGGGGAAGAGGGGTTGCTGGAGTTTGAACCCTGGGACTGGGCTCTTGTCTTCTaGAGACATGGCTGGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: PLCPPVGEEGLLEFEPWDWALVF*RHGWLV Trigger: GACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCA...GTCCCAGGGTTCAAACTCCAGCAACCCCTCTTCCCCTACTGGTGGGCAAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGAGTCGGGCAAGAAGCTTaGGGGGCCTGGCTTATGCCA | + |
Preference number: 4 (lower is better) Translates to: ARSQAVTRAGDRNTESQGVGQEA*GAWLMP Trigger: TGGCATAAGCCAGGCCCCCCAAGCTTCTTGCCCGAC...TCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | AGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGGGCACGCCGCCCACGTTaGTCACGATCTTACCGCTGT | + |
Preference number: 4 (lower is better) Translates to: RSQAVTRAGDRNTESQGWARRPR*SRSYRC Trigger: ACAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGC...CCATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | AGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGGCTGCTGCGTTGGCGTTaGGGTCGGGCAAGAAGCTTG | + |
Preference number: 4 (lower is better) Translates to: RSQAVTRAGDRNTESQGWLLRWR*GRARSL Trigger: CAAGCTTCTTGCCCGACCTCAACGCCAACGCAGCAG...CCATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTTTCTTTGGCAATTTCTaGTTGGCCATAGCCAGTGAA | + |
Preference number: 4 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRFFGNF*LAIASE Trigger: TTCACTGGCTATGGCCAAGCAGAAATTGCCAAAGAA...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR GCA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCGTCCTCATGGGCCAGTaGGGCTGCTGCAGGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: NVPCIGIVASRIGPKDTPVLMGQ*GCCRVS Trigger: GGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGAC...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | AGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGGGGATATCCAGGCTGCTaGGTTGGCGTTGAGGTCGGG | + |
Preference number: 4 (lower is better) Translates to: RSQAVTRAGDRNTESQGWGYPGC*VGVEVG Trigger: CCCGACCTCAACGCCAACGCAGCAGCCTGGATATCC...CCATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | AGCCCAGTGTCTCTAGGACACTCCCTCCCACCATTCCCAGTTGCTAACCTGGGGGGACACCCAAGTCACTaGCTGCCCTGTTGGTTTCAA | + |
Preference number: 4 (lower is better) Translates to: SPVSLGHSLPPFPVANLGGHPSH*LPCWFQ Trigger: TTGAAACCAACAGGGCAGGCAGTGACTTGGGTGTCC...CCCCAGGTTAGCAACTGGGAATGGTGGGAGGGAGTGTCCTAGAGACACTGGGCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | TTTGCACACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGGAGGCATGCGTCTTGTTGCTGATGTaGATGAAGCCCTCGTGTGTC | + |
Preference number: 4 (lower is better) Translates to: FAHSSWRLIAEEGVGEACVLLLM*MKPSCV Trigger: GACACACGAGGGCTTCATCCACATCAGCAACAAGAC...GCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGTGTGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | ACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGGAGGCATGCAAACTGGCAGGCTGCGGGGGCCTaGGAATATGTTTGTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: TAPGGLLLKRGSGRHANWQAAGA*EYVCFS Trigger: AGAAAAACAAACATATTCCCAGGCCCCCGCAGCCTG...CCAGTTTGCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | ATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGATGCCACCGCTGCCGTaGTGGGGGTGTGGTGGGGGT | + |
Preference number: 4 (lower is better) Translates to: ILEPRRDLRKFSIRECGTMPPLP*WGCGGG Trigger: ACCCCCACCACACCCCCACCACGGCAGCGGTGGCAT...CGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTAGGACACTGGCTGGCTGGTCGATaGCAGGGCAGTCCTCATGGG | + |
Preference number: 4 (lower is better) Translates to: QTAGENLEGNGSPVSLGHWLAGR*QGSPHG Trigger: CCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCA...GTGTCCTAGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCCCTCCGCCCGCGTCCTaGAAACACAGACGCTTGAGC | + |
Preference number: 4 (lower is better) Translates to: NVPCIGIVASRIGPKDTPPPPAS*KHRRLS Trigger: GCTCAAGCGTCTGTGTTTTCAGGACGCGGGCGGAGG...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | CTTGGGGGAGGTAGCATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCCACCTCCACGTTGGTaGTATTCTCCGGGGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: LGGGSILEPRRDLRKFSIPPPRW*YSPGEP Trigger: GGGCTCCCCCGGAGAATATCACCAACGTGGAGGTGG...GATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGATGCTACCTCCCCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | TGGTACTCAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTCCACCTCCACGTTGGTaGTATTCTCCGGGGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: WYSNCRRESRGEWKPSVSPPPRW*YSPGEP Trigger: GGGCTCCCCCGGAGAATATCACCAACGTGGAGGTGG...AGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTGAGTACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | ACTCAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTAGGACAGGCTTGCAGTAGTTaGGTGAGCCAGGCTGCGGGG | + |
Preference number: 4 (lower is better) Translates to: TQTAGENLEGNGSPVSLGQACSS*VSQAAG Trigger: CCCCGCAGCCTGGCTCACCCAACTACTGCAAGCCTG...TCCTAGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | AGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGGCAGTGGCTTTTCGGATaGAGCCATCAGGGGAAGGGG | + |
Preference number: 4 (lower is better) Translates to: RSQAVTRAGDRNTESQGWQWLFG*SHQGKG Trigger: CCCCTTCCCCTGATGGCTCCATCCGAAAAGCCACTG...CCATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR TCA 90 bp | CTTGGGGGAGGTAGCATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCGCACGCCGCCCACGTTaGTCACGATCTTACCGCTGT | + |
Preference number: 4 (lower is better) Translates to: LGGGSILEPRRDLRKFSIARRPR*SRSYRC Trigger: ACAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGC...GATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGATGCTACCTCCCCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | GGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGTAGTGCCTCCGCCCGCGTCCTaGAAACACAGACGCTTGAGC | + |
Preference number: 4 (lower is better) Translates to: GAKTRFEKVFHPRMWHVVPPPAS*KHRRLS Trigger: GCTCAAGCGTCTGTGTTTTCAGGACGCGGGCGGAGG...CACTACGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | ATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGGAGGAGGCAATCCCATaGTTCCCAGGCCCCCAGCAC | + |
Preference number: 4 (lower is better) Translates to: ILEPRRDLRKFSIRECGTEEAIP*FPGPQH Trigger: GTGCTGGGGGCCTGGGAATCATGGGATTGCCTCCTC...CGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | ATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGTGTGTGGGGTCCAGGTaGGTAGGCCCCGGCCACATT | + |
Preference number: 4 (lower is better) Translates to: ILEPRRDLRKFSIRECGTCVGSR*VGPGHI Trigger: AATGTGGCCGGGGCCTACCCACCTGGACCCCACACA...CGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGTAGTGTGGCTGGCTGGTCGATaGCAGGGCAGTCCTCATGGG | + |
Preference number: 4 (lower is better) Translates to: GAKTRFEKVFHPRMWHVVWLAGR*QGSPHG Trigger: CCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCA...CACTACGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGTGGGCTCTTGTCTTCTaGAGACATGGCTGGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: QARPVRPLEVEKLIAVSVWALVF*RHGWLV Trigger: GACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCA...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | AGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGGTGGGCTCTTGTCTTCTaGAGACATGGCTGGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: RSQAVTRAGDRNTESQGWWALVF*RHGWLV Trigger: GACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCA...CCATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | CAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTAGGACACGTGGGGGAGCACCAGTaGCTTTTCGGATGGAGCCAT | + |
Preference number: 4 (lower is better) Translates to: QTAGENLEGNGSPVSLGHVGEHQ*LFGWSH Trigger: ATGGCTCCATCCGAAAAGCCACTGGTGCTCCCCCAC...GTGTCCTAGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
3UTR CAA 72 bp | AGCGCTTTTAGCATTGGGTCCCATCCTGTCTTAGACTaGCTTTCAGTGGCAACACCCAACTGCTGCGCTGCC | + |
Preference number: 4 (lower is better) Translates to: SAFSIGSHPVLD*LSVATPNCCAA Trigger: GGCAGCGCAGCAGTTGGGTGTTGCCACTGAAAGCAAGTCTAAGACAGGATGGGACCCAATGCTAAAAGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | GGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGTAGTGGCACGCCGCCCACGTTaGTCACGATCTTACCGCTGT | + |
Preference number: 4 (lower is better) Translates to: GAKTRFEKVFHPRMWHVVARRPR*SRSYRC Trigger: ACAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGC...CACTACGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR TCA 90 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTGCAAACTTCAGCACACCTTGCAGTAGTTGGGTaGGCCAGGCTGCGGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: AHKFKTLGRLCTLQTSAHLAVVG*ARLRGP Trigger: AGGCCCCCGCAGCCTGGCTCACCCAACTACTGCAAG...GTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR GCA 90 bp | GAACCCGAGGGTCTCGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATTTCTTTGGCAATTTCTaGTTGGCCATAGCCAGTGAA | + |
Preference number: 4 (lower is better) Translates to: EPEGLARSQAVTRAGDRNFFGNF*LAIASE Trigger: TTCACTGGCTATGGCCAAGCAGAAATTGCCAAAGAA...ATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGCGAGACCCTCGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | CTTGGGGGAGGTAGCATCCTGGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCTCAGGCCCACAATGCTaGTCAGGCTGCGGGACTTCT | + |
Preference number: 4 (lower is better) Translates to: LGGGSILEPRRDLRKFSISGPQC*SGCGTS Trigger: AGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGA...GATGGAAAACTTTCTCAAATCTCGTCTTGGCTCCAGGATGCTACCTCCCCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GTGATGGGAGCGGTGAAATGGGGGCAGCCAGAGACATCAAATATGGCAGGAGCTCAGGCTGCGGGGGCCTaGGAATATGTTTGTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: VMGAVKWGQPETSNMAGAQAAGA*EYVCFS Trigger: AGAAAAACAAACATATTCCCAGGCCCCCGCAGCCTG...AGCTCCTGCCATATTTGATGTCTCTGGCTGCCCCCATTTCACCGCTCCCATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | ACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTAGGACACTCCAAACTCCACCTTATCTaGGCAGAAGGTGACCCGCAT | + |
Preference number: 4 (lower is better) Translates to: TAGENLEGNGSPVSLGHSKLHLI*AEGDPH Trigger: ATGCGGGTCACCTTCTGCCCAGATAAGGTGGAGTTT...GGAGTGTCCTAGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTGCAAACTTCAGCACACCAGGCTTGCAGTAGTTaGGTGAGCCAGGCTGCGGGG | + |
Preference number: 4 (lower is better) Translates to: AHKFKTLGRLCTLQTSAHQACSS*VSQAAG Trigger: CCCCGCAGCCTGGCTCACCCAACTACTGCAAGCCTG...GTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTGCAAACTTCAGCACACGGGCTCACCAGGGGCTaGCAGAGGAGGCAATCCCAT | + |
Preference number: 4 (lower is better) Translates to: AHKFKTLGRLCTLQTSAHGLTRG*QRRQSH Trigger: ATGGGATTGCCTCCTCTGCCAGCCCCTGGTGAGCCC...GTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CCA 90 bp | GGTGGTACTCAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTGTCTTGTTGCTGATGTaGATGAAGCCCTCGTGTGTC | + |
Preference number: 4 (lower is better) Translates to: GGTQTAGENLEGNGSPVSVLLLM*MKPSCV Trigger: GACACACGAGGGCTTCATCCACATCAGCAACAAGAC...AGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTGAGTACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CCA 90 bp | GAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGATGCACTGCCTGCCCTGTTaGTTTCAATCACCTCTTCTT | + |
Preference number: 4 (lower is better) Translates to: EVSGGDKSWGQKYRESRMHCLPC*FQSPLL Trigger: AAGAAGAGGTGATTGAAACCAACAGGGCAGGCAGTG...CATCCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR GCA 90 bp | ACTCAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTAGGAACCCAAGTCACTGCCTaGCCTGTTGGTTTCAATCAC | + |
Preference number: 4 (lower is better) Translates to: TQTAGENLEGNGSPVSLGTQVTA*PVGFNH Trigger: GTGATTGAAACCAACAGGGCAGGCAGTGACTTGGGT...TCCTAGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
3UTR CAA 72 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTaGCAAACTTCAGCACACGAAGAGGGAACGGGAGTC | + |
Preference number: 4 (lower is better) Translates to: AHKFKTLGRLCT*QTSAHEEGTGV Trigger: GACTCCCGTTCCCTCTTCGTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS GCA 90 bp | AGGCCGCCGCCTCCTGCGCCCGCCTCGTCGTCCAGTCCCGCATCGTaGGCGCCTCCGGCGTTGGCGTTGGCGTTGGCCGAGGAGTCCGGG | + |
Preference number: 5 (lower is better) Translates to: RPPPPAPASSSSPAS*APPALALALAEESG Trigger: CCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACGACGAGGCGGGCGCAGGAGGCGGCGGCCT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS TCA 90 bp | AGAGGCGGCGGTGAGGACTCAGGCGGCTGCGGCGTTGGCACCGGCTaGGGCTGCTGCTTGCCGGTCCCCTGGCGCCCGCGGAACGACCAG | + |
Preference number: 5 (lower is better) Translates to: RGGGEDSGGCGVGTG*GCCLPVPWRPRNDQ Trigger: CTGGTCGTTCCGCGGGCGCCAGGGGACCGGCAAGCAGCAGCCTCAGCCGGTGCCAACGCCGCAGCCGCCTGAGTCCTCACCGCCGCCTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS GCA 90 bp | ACCTCCGCCCGCGTCCTGAAAACACAGACGCTTGAGCTCGCCGCCTaGCCCGTCCAGGCCGCCGCCTCCTGCGCCCGCCTCGTCGTCCAG | + |
Preference number: 5 (lower is better) Translates to: TSARVLKTQTLELAA*PVQAAASCARLVVQ Trigger: CTGGACGACGAGGCGGGCGCAGGAGGCGGCGGCCTGGACGGGGCAGGCGGCGAGCTCAAGCGTCTGTGTTTTCAGGACGCGGGCGGAGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 90 bp | CGCCCGCCTCGTCGTCCAGTCCCGCATCGTGCGCGCCTCCGGCGTTaGCGTTGGCGTTGGCCGAGGAGTCCGGGGCCTCGAAAGAGTCCA | + |
Preference number: 5 (lower is better) Translates to: RPPRRPVPHRARLRR*RWRWPRSPGPRKSP Trigger: TGGACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACGACGAGGCGGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | TGGGGGAGGCTTGGGGGAGGAGCCTGCCGACTCCTTCCTCCCTGCCTGCGGGTGCCTCCGGCGTTGGCGTaGGCGTTGGCCGAGGAGTCC | + |
Preference number: 5 (lower is better) Translates to: WGRLGGGACRLLPPCLRVPPALA*ALAEES Trigger: GGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGG...CACCCGCAGGCAGGGAGGAAGGAGTCGGCAGGCTCCTCCCCCAAGCCTCCCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS CCA 90 bp | CGTCCAGTCCCGCATCGTGCGCGCCTCCGGCGTTGGCGTTGGCGTTaGCCGAGGAGTCCGGGGCCTCGAAAGAGTCCAGTGCCTCCTCAG | + |
Preference number: 5 (lower is better) Translates to: RPVPHRARLRRWRWR*PRSPGPRKSPVPPQ Trigger: CTGAGGAGGCACTGGACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 90 bp | CCTCGTCGTCCAGTCCCGCATCGTGCGCGCCTCCGGCGTTGGCGTTaGCGTTGGCCGAGGAGTCCGGGGCCTCGAAAGAGTCCAGTGCCT | + |
Preference number: 5 (lower is better) Translates to: PRRPVPHRARLRRWR*RWPRSPGPRKSPVP Trigger: AGGCACTGGACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACGACGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCCCTCCGGCGTTGGCGTaGGCGTTGGCCGAGGAGTCC | + |
Preference number: 5 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLPPALA*ALAEES Trigger: GGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGG...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | GTGGCAACACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGGCTGCAGGGTCTCCATaGGGACGGGGGTCTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: VATPNCCAARTHQPGVSLAAGSP*GRGSAL Trigger: CAGGGCAGACCCCCGTCCCAATGGAGACCCTGCAGC...CAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGTGTTGCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGGCTGCAGGGTCTCCATaGGGACGGGGGTCTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSAAGSP*GRGSAL Trigger: CAGGGCAGACCCCCGTCCCAATGGAGACCCTGCAGC...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS GCA 90 bp | GGCTGGCTGGTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTaGTGCAGGGTCTCCATTGGGACGGGGGTCTCCTTCCTCCAGGAC | + |
Preference number: 5 (lower is better) Translates to: GWLVDGRAVLMGQCG*CRVSIGTGVSFLQD Trigger: GTCCTGGAGGAAGGAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGCCTCCGGCGTTGGCGTaGGCGTTGGCCGAGGAGTCC | + |
Preference number: 5 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWPPALA*ALAEES Trigger: GGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGG...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGCTGCAGGGTCTCCATaGGGACGGGGGTCTACTGCC | + |
Preference number: 5 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLAAGSP*GRGSTA Trigger: GGCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGC...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207493.2 |
||
CDS GCA 90 bp | GGCTGGCTGGTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTaGTGCAGGGTCTCCATTGGGACGGGGGTCTGCCCTGTTGGTTTC | + |
Preference number: 5 (lower is better) Translates to: GWLVDGRAVLMGQCG*CRVSIGTGVCPVGF Trigger: GAAACCAACAGGGCAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107907.10 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS GCA 90 bp | GGCTGGCTGGTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTaGTGCAGGGTCTCCATTGGGACGGGGGTCTACTGCCCTGTTGGT | + |
Preference number: 5 (lower is better) Translates to: GWLVDGRAVLMGQCG*CRVSIGTGVYCPVG Trigger: ACCAACAGGGCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS GCA 90 bp | TGGCTGGTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTGCTaGAGGGTCTCCATTGGGACGGGGGTCTCCTTCCTCCAGGACACC | + |
Preference number: 5 (lower is better) Translates to: WLVDGRAVLMGQCGC*RVSIGTGVSFLQDT Trigger: GGTGTCCTGGAGGAAGGAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCCGCACGCCGCCCACGTaGATCACGATCTTACCGCTG | + |
Preference number: 5 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLRTPPT*ITILPL Trigger: CAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGCG...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTCGCACGCCGCCCACGTaGATCACGATCTTACCGCTG | + |
Preference number: 5 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRRTPPT*ITILPL Trigger: CAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGCG...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | ATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCCCTGCGTCACCGTCTTGTaGCTGATGTGGATGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: IPESAHWPAPPAPGQARPCVTVL*LMWMKP Trigger: GGGCTTCATCCACATCAGCAACAAGACGGTGACGCA...GGGCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTATCCAGGCTGCTGCGTaGGCGTTGAGGTCGGGCAAG | + |
Preference number: 5 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRIQAAA*ALRSGK Trigger: CTTGCCCGACCTCAACGCCAACGCAGCAGCCTGGAT...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS GCA 90 bp | TGGCTGGTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTGCTaGAGGGTCTCCATTGGGACGGGGGTCTACTGCCCTGTTGGTTTC | + |
Preference number: 5 (lower is better) Translates to: WLVDGRAVLMGQCGC*RVSIGTGVYCPVGF Trigger: GAAACCAACAGGGCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS CCA 90 bp | CCGGCTTCCGGGAGTGATTGGGCTCTTGTCTTCTGGAGACATGGCTaGCTGGTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTGC | + |
Preference number: 5 (lower is better) Translates to: PASGSDWALVFWRHG*LVDGRAVLMGQCGC Trigger: GCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 90 bp | GCAAGCTCGGTCCCGGCTGTAGCGACCCCGGCTTCCGGGAGTGATTaGGCTCTTGTCTTCTGGAGACATGGCTGGCTGGTCGATGGCAGG | + |
Preference number: 5 (lower is better) Translates to: ASSVPAVATPASGSD*ALVFWRHGWLVDGR Trigger: CCTGCCATCGACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGGGTCGCTACAGCCGGGACCGAGCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGCTGCTGCGTTGGCGTaGAGGTCGGGCAAGAAGCTT | + |
Preference number: 5 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRAAALA*RSGKKL Trigger: AAGCTTCTTGCCCGACCTCAACGCCAACGCAGCAGC...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207497.2 |
||
CDS TCA 90 bp | GGAAGCAAGCTCGGTCCCGGCTGTAGCGACCCCGGCTTCCGGGAGTaGTTGGGCTCTTGTCTTCTGGAGACATGGCTGGCTGGTCGATGG | + |
Preference number: 5 (lower is better) Translates to: GSKLGPGCSDPGFRE*LGSCLLETWLAGRW Trigger: CCATCGACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGGGTCGCTACAGCCGGGACCGAGCTTGCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 90 bp | GCTGTAGCGACCCCGGCTTCCGGGAGTGATTGGGCTCTTGTCTTCTaGAGACATGGCTGGCTGGTCGATGGCAGGGCAGTCCTCATGGGC | + |
Preference number: 5 (lower is better) Translates to: AVATPASGSDWALVF*RHGWLVDGRAVLMG Trigger: GCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGGGTCGCTACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 90 bp | CTTCCGGGAGTGATTGGGCTCTTGTCTTCTGGAGACATGGCTGGCTaGTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTGCTGCA | + |
Preference number: 5 (lower is better) Translates to: LPGVIGLLSSGDMAG*SMAGQSSWASAAAA Trigger: TGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GTGATGGGAGCGGTGAAATGGGGGCAGCCAGAGACATCAAATATGGCAGGAGCTCCTCCGGCGTTGGCGTaGGCGTTGGCCGAGGAGTCC | + |
Preference number: 5 (lower is better) Translates to: VMGAVKWGQPETSNMAGAPPALA*ALAEES Trigger: GGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGG...AGCTCCTGCCATATTTGATGTCTCTGGCTGCCCCCATTTCACCGCTCCCATCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | CGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: RRDTPLRPTMLLRLRDFSFNHLF*SQWAGL Trigger: GAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAA...CGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGGAGTGATTGGGCTCTaGTCTTCTGGAGACATGGCT | + |
Preference number: 5 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLGVIGL*SSGDMA Trigger: AGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCC...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS CCA 90 bp | CTCCACCTCCACGTTGGTGATATTCTCCGGGGGAGCCCCAGGGATTaGGGAGGCCTGCGTCACCGTCTTGTTGCTGATGTGGATGAAGCC | + |
Preference number: 5 (lower is better) Translates to: LHLHVGDILRGSPRD*GGLRHRLVADVDEA Trigger: GGCTTCATCCACATCAGCAACAAGACGGTGACGCAGGCCTCCCCAATCCCTGGGGCTCCCCCGGAGAATATCACCAACGTGGAGGTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACTGCGTCACCGTCTTGTaGCTGATGTGGATGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNCVTVL*LMWMKP Trigger: GGGCTTCATCCACATCAGCAACAAGACGGTGACGCA...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | ACCCAACTGCTGCGCTGCCAGGACGCACCAGCCGGGTGTGAGCCTGCAAAGAGCTTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: TQLLRCQDAPAGCEPAKSFNHLF*SQWAGL Trigger: GAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAA...GCTCTTTGCAGGCTCACACCCGGCTGGTGCGTCCTGGCAGCGCAGCAGTTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | GCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTGGAGTGATTGGGCTCTaGTCTTCTGGAGACATGGCT | + |
Preference number: 5 (lower is better) Translates to: AGTPRSGPQCCSGCGTSRGVIGL*SSGDMA Trigger: AGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCC...ACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS CCA 90 bp | CGGCTGCTGCAGGGTCTCCATTGGGACGGGGGTCTACTGCCCTGTTaGTTTCAATCACCTCTTCTTGAGCCAATGGGCAGGGCTCACCAG | + |
Preference number: 5 (lower is better) Translates to: RLLQGLHWDGGLLPC*FQSPLLEPMGRAHQ Trigger: CTGGTGAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS CCA 90 bp | CAGGGCAGTCCTCATGGGCCAGTGCGGCTGCTGCAGGGTCTCCATTaGGACGGGGGTCTACTGCCCTGTTGGTTTCAATCACCTCTTCTT | + |
Preference number: 5 (lower is better) Translates to: QGSPHGPVRLLQGLH*DGGLLPCWFQSPLL Trigger: AAGAAGAGGTGATTGAAACCAACAGGGCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS-3UTR CAA 90 bp | CCTAAAAATGCTAGCTCCGACCTTAGAGGCTCCCAGCAGCCTCCCCTCCAACTCCGCACGCCGCCCACGTaGATCACGATCTTACCGCTG | + |
Preference number: 5 (lower is better) Translates to: PKNASSDLRGSQQPPLQLRTPPT*ITILPL Trigger: CAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGCG...GAGTTGGAGGGGAGGCTGCTGGGAGCCTCTAAGGTCGGAGCTAGCATTTTTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGTGCGTCACCGTCTTGTaGCTGATGTGGATGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLCVTVL*LMWMKP Trigger: GGGCTTCATCCACATCAGCAACAAGACGGTGACGCA...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | CCATCCCTGAGAGCGCCCATTGGCCAGCCCCTCCCGCGCCAGGTCAGGCTAGGCATGTTCAGGCTGCTTTaGAGAAACTCCACCTTATCT | + |
Preference number: 5 (lower is better) Translates to: PSLRAPIGQPLPRQVRLGMFRLL*RNSTLS Trigger: AGATAAGGTGGAGTTTCTCAAAAGCAGCCTGAACAT...GCCTAGCCTGACCTGGCGCGGGAGGGGCTGGCCAATGGGCGCTCTCAGGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | GCCTGGAGGGCCAAGTCCATGCAGCGAATAGAGGGAGCAGATCCCTGGAGGCGGTTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: AWRAKSMQRIEGADPWRRFNHLF*SQWAGL Trigger: GAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAA...CCGCCTCCAGGGATCTGCTCCCTCTATTCGCTGCATGGACTTGGCCCTCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACTTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNFNHLF*SQWAGL Trigger: GAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAA...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | GTGATGGGAGCGGTGAAATGGGGGCAGCCAGAGACATCAAATATGGCAGGAGCTCGCACGCCGCCCACGTaGATCACGATCTTACCGCTG | + |
Preference number: 5 (lower is better) Translates to: VMGAVKWGQPETSNMAGARTPPT*ITILPL Trigger: CAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGCG...AGCTCCTGCCATATTTGATGTCTCTGGCTGCCCCCATTTCACCGCTCCCATCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | ACAGCTCCTGGCGGCTTATTGCTGAAGAGGGGGTCGGGGAGGCATGCAAACTGGTGCGTCACCGTCTTGTaGCTGATGTGGATGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: TAPGGLLLKRGSGRHANWCVTVL*LMWMKP Trigger: GGGCTTCATCCACATCAGCAACAAGACGGTGACGCA...CCAGTTTGCATGCCTCCCCGACCCCCTCTTCAGCAATAAGCCGCCAGGAGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGTTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLFNHLF*SQWAGL Trigger: GAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAA...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGGAGTGATTGGGCTCTaGTCTTCTGGAGACATGGCT | + |
Preference number: 5 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLGVIGL*SSGDMA Trigger: AGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCC...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS GCA 90 bp | CTCCATTGGGACGGGGGTCTCCTTCCTCCAGGACACCCAAGTCACTaGCTGCCCTGTTGGTTTCAATCACCTCTTCTTGAGCCAATGGGC | + |
Preference number: 5 (lower is better) Translates to: LHWDGGLLPPGHPSH*LPCWFQSPLLEPMG Trigger: GCCCATTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGGCAGTGACTTGGGTGTCCTGGAGGAAGGAGACCCCCGTCCCAATGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGTAGTGCCTCCGGCGTTGGCGTaGGCGTTGGCCGAGGAGTCC | + |
Preference number: 5 (lower is better) Translates to: GAKTRFEKVFHPRMWHVVPPALA*ALAEES Trigger: GGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGG...CACTACGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | AGCCCAGTGTCTCTAGGACACTCCCTCCCACCATTCCCAGTTGCTAACCTGGGGTGCGTCACCGTCTTGTaGCTGATGTGGATGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: SPVSLGHSLPPFPVANLGCVTVL*LMWMKP Trigger: GGGCTTCATCCACATCAGCAACAAGACGGTGACGCA...CCCCAGGTTAGCAACTGGGAATGGTGGGAGGGAGTGTCCTAGAGACACTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GCGCAGGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCATGTTCAGGCTGCTTTaGAGAAACTCCACCTTATCT | + |
Preference number: 5 (lower is better) Translates to: AQGHPAQAHNAAQAAGLLMFRLL*RNSTLS Trigger: AGATAAGGTGGAGTTTCTCAAAAGCAGCCTGAACAT...GAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCCTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | GTGATGGGAGCGGTGAAATGGGGGCAGCCAGAGACATCAAATATGGCAGGAGCTGCTGCTGCGTTGGCGTaGAGGTCGGGCAAGAAGCTT | + |
Preference number: 5 (lower is better) Translates to: VMGAVKWGQPETSNMAGAAAALA*RSGKKL Trigger: AAGCTTCTTGCCCGACCTCAACGCCAACGCAGCAGC...AGCTCCTGCCATATTTGATGTCTCTGGCTGCCCCCATTTCACCGCTCCCATCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | AATGTCCCTTGCATAGGAATTGTTGCATCAAGAATTGGGCCCAAGGACACCCCCGCTGCAGGGTCTCCATaGGGACGGGGGTCTACTGCC | + |
Preference number: 5 (lower is better) Translates to: NVPCIGIVASRIGPKDTPAAGSP*GRGSTA Trigger: GGCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGC...GGGGGTGTCCTTGGGCCCAATTCTTGATGCAACAATTCCTATGCAAGGGACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107906.6 |
||
CDS-3UTR CAA 90 bp | GGTGGTACTCAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTATCCAGGCTGCTGCGTaGGCGTTGAGGTCGGGCAAG | + |
Preference number: 5 (lower is better) Translates to: GGTQTAGENLEGNGSPVSIQAAA*ALRSGK Trigger: CTTGCCCGACCTCAACGCCAACGCAGCAGCCTGGAT...AGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTGAGTACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GGGAGGGTTGACATGCGGCAGCTTCTGCGTGGGTGGTTCATGCACCCTGGGTGGATGTTCAGGCTGCTTTaGAGAAACTCCACCTTATCT | + |
Preference number: 5 (lower is better) Translates to: GRVDMRQLLRGWFMHPGWMFRLL*RNSTLS Trigger: AGATAAGGTGGAGTTTCTCAAAAGCAGCCTGAACAT...CCACCCAGGGTGCATGAACCACCCACGCAGAAGCTGCCGCATGTCAACCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | GGAGCCAAGACGAGATTTGAGAAAGTTTTCCATCCGAGAATGTGGCACGTAGTGCGCACGCCGCCCACGTaGATCACGATCTTACCGCTG | + |
Preference number: 5 (lower is better) Translates to: GAKTRFEKVFHPRMWHVVRTPPT*ITILPL Trigger: CAGCGGTAAGATCGTGATCAACGTGGGCGGCGTGCG...CACTACGTGCCACATTCTCGGATGGAAAACTTTCTCAAATCTCGTCTTGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | ACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGATGTTCAGGCTGCTTTaGAGAAACTCCACCTTATCT | + |
Preference number: 5 (lower is better) Translates to: TPRSGPQCCSGCGTSRNLMFRLL*RNSTLS Trigger: AGATAAGGTGGAGTTTCTCAAAAGCAGCCTGAACAT...CAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | CACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACCTGGGGCCTGGGAATATGTTaGTTTTTCTTCTTTGGCAAT | + |
Preference number: 5 (lower is better) Translates to: HPAQAHNAAQAAGLLVTWGLGIC*FFFFGN Trigger: ATTGCCAAAGAAGAAAAACAAACATATTCCCAGGCC...CCAGGTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | GGGACACCCCGCTCAGGCCCACAATGCTGCTCAGGCTGCGGGACTTCTCGTAACGGCCTGGGAATATGTTaGTTTTTCTTCTTTGGCAAT | + |
Preference number: 5 (lower is better) Translates to: GTPRSGPQCCSGCGTSRNGLGIC*FFFFGN Trigger: ATTGCCAAAGAAGAAAAACAAACATATTCCCAGGCC...GTTACGAGAAGTCCCGCAGCCTGAGCAGCATTGTGGGCCTGAGCGGGGTGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207493.2 ENSMUST00000208651.2 |
||
CDS-3UTR CAA 90 bp | GTGATGGGAGCGGTGAAATGGGGGCAGCCAGAGACATCAAATATGGCAGGAGCTGGAGTGATTGGGCTCTaGTCTTCTGGAGACATGGCT | + |
Preference number: 5 (lower is better) Translates to: VMGAVKWGQPETSNMAGAGVIGL*SSGDMA Trigger: AGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCC...AGCTCCTGCCATATTTGATGTCTCTGGCTGCCCCCATTTCACCGCTCCCATCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | CAGGCTAGGCCCGTCCGCCCACTAGAAGTAGAGAAACTTATTGCTGTGAGTGTGGGAGTGATTGGGCTCTaGTCTTCTGGAGACATGGCT | + |
Preference number: 5 (lower is better) Translates to: QARPVRPLEVEKLIAVSVGVIGL*SSGDMA Trigger: AGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCC...CACACTCACAGCAATAAGTTTCTCTACTTCTAGTGGGCGGACGGGCCTAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | ACTCAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTAGGATTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: TQTAGENLEGNGSPVSLGFNHLF*SQWAGL Trigger: GAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAA...TCCTAGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | CCTAAAAATGCTAGCTCCGACCTTAGAGGCTCCCAGCAGCCTCCCCTCCAACTCGGCCTGGGAATATGTTaGTTTTTCTTCTTTGGCAAT | + |
Preference number: 5 (lower is better) Translates to: PKNASSDLRGSQQPPLQLGLGIC*FFFFGN Trigger: ATTGCCAAAGAAGAAAAACAAACATATTCCCAGGCC...GAGTTGGAGGGGAGGCTGCTGGGAGCCTCTAAGGTCGGAGCTAGCATTTTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | CGCGAGGTCTCAGGCGGTGACAAGAGCTGGGGACAGAAATACAGAGAGTCAAGGGGCCTGGGAATATGTTaGTTTTTCTTCTTTGGCAAT | + |
Preference number: 5 (lower is better) Translates to: REVSGGDKSWGQKYRESRGLGIC*FFFFGN Trigger: ATTGCCAAAGAAGAAAAACAAACATATTCCCAGGCC...CCTTGACTCTCTGTATTTCTGTCCCCAGCTCTTGTCACCGCCTGAGACCTCGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTGCAAACTTCAGCACACGGAGTGATTGGGCTCTaGTCTTCTGGAGACATGGCT | + |
Preference number: 5 (lower is better) Translates to: AHKFKTLGRLCTLQTSAHGVIGL*SSGDMA Trigger: AGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCC...GTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS-3UTR CAA 90 bp | TGGTACTCAAACTGCAGGAGAGAATCTAGAGGGGAATGGAAGCCCAGTGTCTCTATGTTCAGGCTGCTTTaGAGAAACTCCACCTTATCT | + |
Preference number: 5 (lower is better) Translates to: WYSNCRRESRGEWKPSVSMFRLL*RNSTLS Trigger: AGATAAGGTGGAGTTTCTCAAAAGCAGCCTGAACAT...AGAGACACTGGGCTTCCATTCCCCTCTAGATTCTCTCCTGCAGTTTGAGTACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS-3UTR CAA 90 bp | GCACACAAGTTTAAAACACTTGGTCGTCTGTGCACTTTGCAAACTTCAGCACACGGCCTGGGAATATGTTaGTTTTTCTTCTTTGGCAAT | + |
Preference number: 5 (lower is better) Translates to: AHKFKTLGRLCTLQTSAHGLGIC*FFFFGN Trigger: ATTGCCAAAGAAGAAAAACAAACATATTCCCAGGCC...GTGTGCTGAAGTTTGCAAAGTGCACAGACGACCAAGTGTTTTAAACTTGTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 |
||
CDS TCA 72 bp | GGTGAGGACTCAGGCGGCTGCGGCGTTGGCACCGGCTaGGGCTGCTGCTTGCCGGTCCCCTGGCGCCCGCGG | + |
Preference number: 6 (lower is better) Translates to: GEDSGGCGVGTG*GCCLPVPWRPR Trigger: CCGCGGGCGCCAGGGGACCGGCAAGCAGCAGCCTCAGCCGGTGCCAACGCCGCAGCCGCCTGAGTCCTCACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | GCGCGGCCGCCTCGGGCTCGGTCAGCCCGGCCAGTCTaGTCCCTGGCAGGGTGCGCAACGTGGAGCGGTACG | + |
Preference number: 6 (lower is better) Translates to: ARPPRARSARPV*SLAGCATWSGT Trigger: CGTACCGCTCCACGTTGCGCACCCTGCCAGGGACCAGACTGGCCGGGCTGACCGAGCCCGAGGCGGCCGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS GCA 72 bp | CCTCCTGCGCCCGCCTCGTCGTCCAGTCCCGCATCGTaGGCGCCTCCGGCGTTGGCGTTGGCGTTGGCCGAG | + |
Preference number: 6 (lower is better) Translates to: PPAPASSSSPAS*APPALALALAE Trigger: CTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACGACGAGGCGGGCGCAGGAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS TCA 72 bp | CCCCCGGCAGGTCCTCCGGCACCTCCGCCCGCGTCCTaGAAACACAGACGCTTGAGCTCGCCGCCTGCCCCG | + |
Preference number: 6 (lower is better) Translates to: PPAGPPAPPPAS*KHRRLSSPPAP Trigger: CGGGGCAGGCGGCGAGCTCAAGCGTCTGTGTTTTCAGGACGCGGGCGGAGGTGCCGGAGGACCTGCCGGGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CAA 72 bp | GCAGAGGCGGCGGTGAGGACTCAGGCGGCTGCGGCGTaGGCACCGGCTGAGGCTGCTGCTTGCCGGTCCCCT | + |
Preference number: 6 (lower is better) Translates to: AEAAVRTQAAAA*APAEAAACRSP Trigger: AGGGGACCGGCAAGCAGCAGCCTCAGCCGGTGCCAACGCCGCAGCCGCCTGAGTCCTCACCGCCGCCTCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CAA 72 bp | TCGTCGTCCAGTCCCGCATCGTGCGCGCCTCCGGCGTaGGCGTTGGCGTTGGCCGAGGAGTCCGGGGCCTCG | + |
Preference number: 6 (lower is better) Translates to: SSSSPASCAPPA*ALALAEESGAS Trigger: CGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACGACGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CAA 90 bp | GCGCCCGCCTCGTCGTCCAGTCCCGCATCGTGCGCGCCTCCGGCGTaGGCGTTGGCGTTGGCCGAGGAGTCCGGGGCCTCGAAAGAGTCC | + |
Preference number: 6 (lower is better) Translates to: APASSSSPASCAPPA*ALALAEESGASKES Trigger: GGACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACGACGAGGCGGGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CAA 90 bp | GCCTCGTCGTCCAGTCCCGCATCGTGCGCGCCTCCGGCGTTGGCGTaGGCGTTGGCCGAGGAGTCCGGGGCCTCGAAAGAGTCCAGTGCC | + |
Preference number: 6 (lower is better) Translates to: ASSSSPASCAPPALA*ALAEESGASKESSA Trigger: GGCACTGGACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACGACGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | CCGCATCGTGCGCGCCTCCGGCGTTGGCGTTGGCGTTaGCCGAGGAGTCCGGGGCCTCGAAAGAGTCCAGTG | + |
Preference number: 6 (lower is better) Translates to: PHRARLRRWRWR*PRSPGPRKSPV Trigger: CACTGGACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | CCAGTCCCGCATCGTGCGCGCCTCCGGCGTTGGCGTTaGCGTTGGCCGAGGAGTCCGGGGCCTCGAAAGAGT | + |
Preference number: 6 (lower is better) Translates to: PVPHRARLRRWR*RWPRSPGPRKS Trigger: ACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CAA 72 bp | CCCGCATCGTGCGCGCCTCCGGCGTTGGCGTTGGCGTaGGCCGAGGAGTCCGGGGCCTCGAAAGAGTCCAGT | + |
Preference number: 6 (lower is better) Translates to: PASCAPPALALA*AEESGASKESS Trigger: ACTGGACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CAA 72 bp | TCCAGTCCCGCATCGTGCGCGCCTCCGGCGTTGGCGTaGGCGTTGGCCGAGGAGTCCGGGGCCTCGAAAGAG | + |
Preference number: 6 (lower is better) Translates to: SSPASCAPPALA*ALAEESGASKE Trigger: CTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CAA 90 bp | TCGTCCAGTCCCGCATCGTGCGCGCCTCCGGCGTTGGCGTTGGCGTaGGCCGAGGAGTCCGGGGCCTCGAAAGAGTCCAGTGCCTCCTCA | + |
Preference number: 6 (lower is better) Translates to: SSSPASCAPPALALA*AEESGASKESSASS Trigger: TGAGGAGGCACTGGACTCTTTCGAGGCCCCGGACTCCTCGGCCAACGCCAACGCCAACGCCGGAGGCGCGCACGATGCGGGACTGGACGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS GCA 72 bp | GTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTaGTGCAGGGTCTCCATTGGGACGGGGGTCTGCCCT | + |
Preference number: 6 (lower is better) Translates to: VDGRAVLMGQCG*CRVSIGTGVCP Trigger: AGGGCAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107907.10 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS GCA 72 bp | GTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTaGTGCAGGGTCTCCATTGGGACGGGGGTCTACTGC | + |
Preference number: 6 (lower is better) Translates to: VDGRAVLMGQCG*CRVSIGTGVYC Trigger: GCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS GCA 72 bp | GTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCGGCTaGTGCAGGGTCTCCATTGGGACGGGGGTCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: VDGRAVLMGQCG*CRVSIGTGVSF Trigger: GAAGGAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS CCA 72 bp | GACATGGCTGGCTGGTCGATGGCAGGGCAGTCCTCATaGGCCAGTGCGGCTGCTGCAGGGTCTCCATTGGGA | + |
Preference number: 6 (lower is better) Translates to: DMAGWSMAGQSS*ASAAAAGSPLG Trigger: TCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCATGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | CCTCATGGGCCAGTGCGGCTGCTGCAGGGTCTCCATTaGGACGGGGGTCTCCTTCCTCCAGGACACCCAAGT | + |
Preference number: 6 (lower is better) Translates to: PHGPVRLLQGLH*DGGLLPPGHPS Trigger: ACTTGGGTGTCCTGGAGGAAGGAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS CCA 72 bp | GTCCCGGCTGTAGCGACCCCGGCTTCCGGGAGTGATTaGGCTCTTGTCTTCTGGAGACATGGCTGGCTGGTC | + |
Preference number: 6 (lower is better) Translates to: VPAVATPASGSD*ALVFWRHGWLV Trigger: GACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGGGTCGCTACAGCCGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | CCTCATGGGCCAGTGCGGCTGCTGCAGGGTCTCCATTaGGACGGGGGTCTGCCCTGTTGGTTTCAATCACCT | + |
Preference number: 6 (lower is better) Translates to: PHGPVRLLQGLH*DGGLPCWFQSP Trigger: AGGTGATTGAAACCAACAGGGCAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107907.10 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS CCA 72 bp | ACCCCGGCTTCCGGGAGTGATTGGGCTCTTGTCTTCTaGAGACATGGCTGGCTGGTCGATGGCAGGGCAGTC | + |
Preference number: 6 (lower is better) Translates to: TPASGSDWALVF*RHGWLVDGRAV Trigger: GACTGCCCTGCCATCGACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCCCGGAAGCCGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | CACGTTGGTGATATTCTCCGGGGGAGCCCCAGGGATTaGGGAGGCCTGCGTCACCGTCTTGTTGCTGATGTG | + |
Preference number: 6 (lower is better) Translates to: HVGDILRGSPRD*GGLRHRLVADV Trigger: CACATCAGCAACAAGACGGTGACGCAGGCCTCCCCAATCCCTGGGGCTCCCCCGGAGAATATCACCAACGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | GTGATTGGGCTCTTGTCTTCTGGAGACATGGCTGGCTaGTCGATGGCAGGGCAGTCCTCATGGGCCAGTGCG | + |
Preference number: 6 (lower is better) Translates to: VIGLLSSGDMAG*SMAGQSSWASA Trigger: CGCACTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | GGGAGTGATTGGGCTCTTGTCTTCTGGAGACATGGCTaGCTGGTCGATGGCAGGGCAGTCCTCATGGGCCAG | + |
Preference number: 6 (lower is better) Translates to: GSDWALVFWRHG*LVDGRAVLMGQ Trigger: CTGGCCCATGAGGACTGCCCTGCCATCGACCAGCCAGCCATGTCTCCAGAAGACAAGAGCCCAATCACTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000107906.6 ENSMUST00000107907.10 ENSMUST00000207493.2 ENSMUST00000207497.2 ENSMUST00000208651.2 ENSMUST00000209177.2 |
||
CDS CCA 72 bp | CCTCATGGGCCAGTGCGGCTGCTGCAGGGTCTCCATTaGGACGGGGGTCTACTGCCCTGTTGGTTTCAATCA | + |
Preference number: 6 (lower is better) Translates to: PHGPVRLLQGLH*DGGLLPCWFQS Trigger: TGATTGAAACCAACAGGGCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCACTGGCCCATGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS CAA 90 bp | TCCATTGGGACGGGGGTCTGCCCTGTTGGTTTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTCACCAGGGGCTGGCAGAGGAGGCAA | + |
Preference number: 6 (lower is better) Translates to: SIGTGVCPVGFNHLF*SQWAGLTRGWQRRQ Trigger: TTGCCTCCTCTGCCAGCCCCTGGTGAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGACCCCCGTCCCAATGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107907.10 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS CAA 90 bp | ATTGGGACGGGGGTCTACTGCCCTGTTGGTTTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTCACCAGGGGCTGGCAGAGGAGGCAA | + |
Preference number: 6 (lower is better) Translates to: IGTGVYCPVGFNHLF*SQWAGLTRGWQRRQ Trigger: TTGCCTCCTCTGCCAGCCCCTGGTGAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGTAGACCCCCGTCCCAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS CAA 90 bp | GACACCCAAGTCACTGCCTGCCCTGTTGGTTTCAATCACCTCTTCTaGAGCCAATGGGCAGGGCTCACCAGGGGCTGGCAGAGGAGGCAA | + |
Preference number: 6 (lower is better) Translates to: DTQVTACPVGFNHLF*SQWAGLTRGWQRRQ Trigger: TTGCCTCCTCTGCCAGCCCCTGGTGAGCCCTGCCCATTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGGCAGTGACTTGGGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |
||
CDS GCA 72 bp | TGCGGCTGCTGCAGGGTCTCCATTGGGACGGGGGTCTaGCCTGTTGGTTTCAATCACCTCTTCTTGAGCCAA | + |
Preference number: 6 (lower is better) Translates to: CGCCRVSIGTGV*PVGFNHLFLSQ Trigger: TTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107907.10 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS CCA 72 bp | CTGCAGGGTCTCCATTGGGACGGGGGTCTGCCCTGTTaGTTTCAATCACCTCTTCTTGAGCCAATGGGCAGG | + |
Preference number: 6 (lower is better) Translates to: LQGLHWDGGLPC*FQSPLLEPMGR Trigger: CCTGCCCATTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGACCCCCGTCCCAATGGAGACCCTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107907.10 ENSMUST00000207497.2 ENSMUST00000208651.2 |
||
CDS GCA 72 bp | GGCTGCTGCAGGGTCTCCATTGGGACGGGGGTCTACTaGCCTGTTGGTTTCAATCACCTCTTCTTGAGCCAA | + |
Preference number: 6 (lower is better) Translates to: GCCRVSIGTGVY*PVGFNHLFLSQ Trigger: TTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGTAGACCCCCGTCCCAATGGAGACCCTGCAGCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS CCA 72 bp | CAGGGTCTCCATTGGGACGGGGGTCTACTGCCCTGTTaGTTTCAATCACCTCTTCTTGAGCCAATGGGCAGG | + |
Preference number: 6 (lower is better) Translates to: QGLHWDGGLLPC*FQSPLLEPMGR Trigger: CCTGCCCATTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGTAGACCCCCGTCCCAATGGAGACCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107906.6 ENSMUST00000207493.2 |
||
CDS CCA 72 bp | CTTCCTCCAGGACACCCAAGTCACTGCCTGCCCTGTTaGTTTCAATCACCTCTTCTTGAGCCAATGGGCAGG | + |
Preference number: 6 (lower is better) Translates to: LPPGHPSHCLPC*FQSPLLEPMGR Trigger: CCTGCCCATTGGCTCAAGAAGAGGTGATTGAAACCAACAGGGCAGGCAGTGACTTGGGTGTCCTGGAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209177.2 |