Pregenerated sensors for KCNC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035681Ensembl transcript IDs: ENSMUST00000092175.4, ENSMUST00000218445.2, ENSMUST00000218827.2, ENSMUST00000219301.2, ENSMUST00000219607.2
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACCGTGAGCCTGAGAGGAGCCATTCAGAGCCTTGCGGGCATTCCTTaGAGCCCCACAGACGCTGACCATGAATGTGGCGTCTCACCGTCT | + |
Preference number: 1 (lower is better) Translates to: TVSLRGAIQSLAGIP*SPTDADHECGVSPS Trigger: AGACGGTGAGACGCCACATTCATGGTCAGCGTCTGTGGGGCTTCAAGGAATGCCCGCAAGGCTCTGAATGGCTCCTCTCAGGCTCACGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CCA 90 bp | CCGAGAGCGCCTCAGAGGACACGGAGAGTTGTAGGGGGACGTTACTaGAGAGAGTCTCAGAGCATTGCCTGCCAAGCCCGCTATGTTGTT | + |
Preference number: 1 (lower is better) Translates to: PRAPQRTRRVVGGRY*RESQSIACQARYVV Trigger: AACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCTCTCCAGTAACGTCCCCCTACAACTCTCCGTGTCCTCTGAGGCGCTCTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR CCA 90 bp | GAGTGGGCAGGTCCATGCACACGGTTGGTATTTACAGCTGTTCCGTaGACTCAGGTCTGTCGACAAGCAGAATATTCCCATGGCGAGCAC | + |
Preference number: 1 (lower is better) Translates to: EWAGPCTRLVFTAVP*TQVCRQAEYSHGEH Trigger: GTGCTCGCCATGGGAATATTCTGCTTGTCGACAGACCTGAGTCCACGGAACAGCTGTAAATACCAACCGTGTGCATGGACCTGCCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 90 bp | GTCTCACCGTCTGATGTCTGTGGCGTCTCACTGTCTATGAGACGGTaGGAGTGGGCAGGTCCATGCACACGGTTGGTATTTACAGCTGTT | + |
Preference number: 1 (lower is better) Translates to: VSPSDVCGVSLSMRR*EWAGPCTRLVFTAV Trigger: AACAGCTGTAAATACCAACCGTGTGCATGGACCTGCCCACTCTCACCGTCTCATAGACAGTGAGACGCCACAGACATCAGACGGTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR GCA 90 bp | ACGGAGAGTTGTAGGGGGACGTTACTGGAGAGAGTCTCAGAGCATTaGCTGCCAAGCCCGCTATGTTGTTTAAGCTTCGGGATTTTTCAT | + |
Preference number: 1 (lower is better) Translates to: TESCRGTLLERVSEH*LPSPLCCLSFGIFH Trigger: ATGAAAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCTCTCCAGTAACGTCCCCCTACAACTCTCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR GCA 90 bp | ACCACTTCAGTCAGGACCCCATCCTCTGACCTCTGGAGGCAGTCATaGATTGTAGCATTTTTCAGCAGAATGTTAGAGGCAGTAGAAAGA | + |
Preference number: 1 (lower is better) Translates to: TTSVRTPSSDLWRQS*IVAFFSRMLEAVER Trigger: TCTTTCTACTGCCTCTAACATTCTGCTGAAAAATGCTACAATGCATGACTGCCTCCAGAGGTCAGAGGATGGGGTCCTGACTGAAGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219301.2 |
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3UTR CCA 90 bp | GAGGTAGGGAGTTCAAAGAGACAATCAGGGCACGTCTACCCTCTATaGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGA | + |
Preference number: 1 (lower is better) Translates to: EVGSSKRQSGHVYPL*RQHIELRQGAKTDR Trigger: TCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCATAGAGGGTAGACGTGCCCTGATTGTCTCTTTGAACTCCCTACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR GCA 90 bp | AGCACCATCTCAGTTCCAGCCACAGTCCCTTTTATAAGCTTTAAATaGCTCATAAGATGCGGGACCTCTTCTGGAAACAAACGGGTCACA | + |
Preference number: 1 (lower is better) Translates to: STISVPATVPFISFK*LIRCGTSSGNKRVT Trigger: TGTGACCCGTTTGTTTCCAGAAGAGGTCCCGCATCTTATGAGGCATTTAAAGCTTATAAAAGGGACTGTGGCTGGAACTGAGATGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CCA 90 bp | TTGATAGAATTTAGCCGATTGATGCAGTTTGGTTTACAAGATAGATaGGATGGGAGACCGAGAGCGCCTCAGAGGACACGGAGAGTTGTA | + |
Preference number: 1 (lower is better) Translates to: LIEFSRLMQFGLQDR*DGRPRAPQRTRRVV Trigger: TACAACTCTCCGTGTCCTCTGAGGCGCTCTCGGTCTCCCATCCCATCTATCTTGTAAACCAAACTGCATCAATCGGCTAAATTCTATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR GCA 90 bp | TATTTACGTCTGGGTAAATGCATTGCTGTACAAGATCTCTTGACATaGAGCTCATGCTCTAGGGCTTGGGAATGGAGACTAACACACGTC | + |
Preference number: 1 (lower is better) Translates to: YLRLGKCIAVQDLLT*SSCSRAWEWRLTHV Trigger: GACGTGTGTTAGTCTCCATTCCCAAGCCCTAGAGCATGAGCTGCATGTCAAGAGATCTTGTACAGCAATGCATTTACCCAGACGTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR GCA 90 bp | GTTCCAGCCACAGTCCCTTTTATAAGCTTTAAATGCCTCATAAGATaGGGGACCTCTTCTGGAAACAAACGGGTCACATCGGGTTACATT | + |
Preference number: 1 (lower is better) Translates to: VPATVPFISFKCLIR*GTSSGNKRVTSGYI Trigger: AATGTAACCCGATGTGACCCGTTTGTTTCCAGAAGAGGTCCCGCATCTTATGAGGCATTTAAAGCTTATAAAAGGGACTGTGGCTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 90 bp | GCGATTTCACATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTaGGCCATCCAGTCCCAGGACTCTACAACATTGTATTCAGGTGAT | + |
Preference number: 1 (lower is better) Translates to: AISHLQDGLKQVHVS*AIQSQDSTTLYSGD Trigger: ATCACCTGAATACAATGTTGTAGAGTCCTGGGACTGGATGGCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 90 bp | TTCCCAACTTCTTGGGAATGTGTAAGTGTGTGTGCTGTAGAACCATaGAGCAGAACAACAGCCAAGCCACTGAAATCGAAACACACAAAG | + |
Preference number: 1 (lower is better) Translates to: FPTSWECVSVCAVEP*SRTTAKPLKSKHTK Trigger: CTTTGTGTGTTTCGATTTCAGTGGCTTGGCTGTTGTTCTGCTTCATGGTTCTACAGCACACACACTTACACATTCCCAAGAAGTTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR CCA 90 bp | CTAGGTAGTCTACACAGCATCATTAGTTTTGCATACAAGAAGACATaGGTAGGAGGTAGGGAGTTCAAAGAGACAATCAGGGCACGTCTA | + |
Preference number: 1 (lower is better) Translates to: LGSLHSIISFAYKKT*VGGREFKETIRARL Trigger: TAGACGTGCCCTGATTGTCTCTTTGAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTGTAGACTACCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR GCA 90 bp | ATTGTGTATGGTAAGTTTATTCATATCCCTGCAATATGGCTGGGATaGCAGCTATGTTCGTCATGTGTAGGAAACAGAGATCCAAAGACA | + |
Preference number: 1 (lower is better) Translates to: IVYGKFIHIPAIWLG*QLCSSCVGNRDPKT Trigger: TGTCTTTGGATCTCTGTTTCCTACACATGACGAACATAGCTGGCATCCCAGCCATATTGCAGGGATATGAATAAACTTACCATACACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR CCA 90 bp | GATAGTAACAGCCTTCCAGAACTAAATGAACACGTGACCAAGAAATaGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGA | + |
Preference number: 1 (lower is better) Translates to: DSNSLPELNEHVTKK*LDFYVDTRSLQHSR Trigger: TCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTGTTCATTTAGTTCTGGAAGGCTGTTACTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CCA 90 bp | TATTATAGAATTGTGTATGGTAAGTTTATTCATATCCCTGCAATATaGCTGGGATGCCAGCTATGTTCGTCATGTGTAGGAAACAGAGAT | + |
Preference number: 1 (lower is better) Translates to: YYRIVYGKFIHIPAI*LGCQLCSSCVGNRD Trigger: ATCTCTGTTTCCTACACATGACGAACATAGCTGGCATCCCAGCCATATTGCAGGGATATGAATAAACTTACCATACACAATTCTATAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | GAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACACACGGGACGAAGCGTAGGGGGACGTTACTaGAGAGAGTCTCAGAGCATT | + |
Preference number: 2 (lower is better) Translates to: ELRQGAKTDRWRQHTGRSVGGRY*RESQSI Trigger: AATGCTCTGAGACTCTCTCCAGTAACGTCCCCCTAC...GCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTGGTTTACAAGATAGATaGGATGGGAGACCGAGAGCG | + |
Preference number: 2 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLGLQDR*DGRPRA Trigger: CGCTCTCGGTCTCCCATCCCATCTATCTTGTAAACC...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | GACAGACAGATGGAGACAACACACGGGACGAAGCACCTGATTAAACACAGCCTGGATGGTCCATGCCAATaGACTGACCAAAGTCATGTC | + |
Preference number: 2 (lower is better) Translates to: DRQMETTHGTKHLIKHSLDGPCQ*TDQSHV Trigger: GACATGACTTTGGTCAGTTCATTGGCATGGACCATC...CAGGCTGTGTTTAATCAGGTGCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTGAAGGTCCAGAAAGGTaGCTGGCATTTAGAAGCACA | + |
Preference number: 2 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLEGPER*LAFRST Trigger: TGTGCTTCTAAATGCCAGCCACCTTTCTGGACCTTC...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | GAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACACACGGGACGAAGCCCAAGCAGCGATTCTTaGCTAAACAATGCAAGCCTG | + |
Preference number: 2 (lower is better) Translates to: ELRQGAKTDRWRQHTGRSPSSDS*LNNASL Trigger: CAGGCTTGCATTGTTTAGCCAAGAATCGCTGCTTGG...GCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTGCATACAAGAAGACATaGGTAGGAGGTAGGGAGTTC | + |
Preference number: 2 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLAYKKT*VGGREF Trigger: GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGC...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | TGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCCAAAGTCATGTCCTATaGGATCTAGATAGGATCCCA | + |
Preference number: 2 (lower is better) Translates to: CAFPKSLSKRSGLGLRVTQSHVL*DLDRIP Trigger: TGGGATCCTATCTAGATCGCATAGGACATGACTTTG...GGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | GAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACACACGGGACGAAGCCACGTCTACCCTCTATaGAGACAGCATATAGAGTTA | + |
Preference number: 2 (lower is better) Translates to: ELRQGAKTDRWRQHTGRSHVYPL*RQHIEL Trigger: TAACTCTATATGCTGTCTCCATAGAGGGTAGACGTG...GCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CAA 90 bp | GTTACTGGAGAGAGTCTCAGAGCATTGCCTGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTTTCATATCCTTTCCTGATTCCTCCA | + |
Preference number: 2 (lower is better) Translates to: VTGESLRALPAKPAM*FKLRDFSYPFLIPP Trigger: TGGAGGAATCAGGAAAGGATATGAAAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCTCTCCAGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | CCCAGCGATTTCACATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCGATGGTCCATGCCAATaGACTGACCAAAGTCATGTC | + |
Preference number: 2 (lower is better) Translates to: PSDFTFAGWFEASTCILSDGPCQ*TDQSHV Trigger: GACATGACTTTGGTCAGTTCATTGGCATGGACCATC...GCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | TGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCAACATTGTATTCAGGTaGTACAGACAAGATGGTCCA | + |
Preference number: 2 (lower is better) Translates to: CAFPKSLSKRSGLGLRVTNIVFR*YRQDGP Trigger: TGGACCATCTTGTCTGTATCACCTGAATACAATGTT...GGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTAACATTGTATTCAGGTaGTACAGACAAGATGGTCCA | + |
Preference number: 2 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLNIVFR*YRQDGP Trigger: TGGACCATCTTGTCTGTATCACCTGAATACAATGTT...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | ATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTTTTCATATCCTTTCCTaGTTCCTCCATCAGAAGCGC | + |
Preference number: 2 (lower is better) Translates to: MFCAFPKSLSKRSGLGLRFHILS*FLHQKR Trigger: GCGCTTCTGATGGAGGAATCAGGAAAGGATATGAAA...ACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | GAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACACACGGGACGAAGCTATTGGTCACTGTATTaGAAAAGGAAACTGGGGCAA | + |
Preference number: 2 (lower is better) Translates to: ELRQGAKTDRWRQHTGRSYWSLY*KRKLGQ Trigger: TTGCCCCAGTTTCCTTTTGCAATACAGTGACCAATA...GCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTTTACGTCTGGGTAAATaGATTGCTGTACAAGATCTC | + |
Preference number: 2 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLLRLGK*IAVQDL Trigger: GAGATCTTGTACAGCAATGCATTTACCCAGACGTAA...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCGCTAAGACAGACAGATaGAGACAACACACGGGACGA | + |
Preference number: 2 (lower is better) Translates to: HSIISFAYKKTWVGGREFAKTDR*RQHTGR Trigger: TCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGC...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | CATTGGCTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACATGGAGTCACAAGAAATaGAGGTCCAGAAAGGTGGCT | + |
Preference number: 2 (lower is better) Translates to: HWLIRRLGMHLEMVTKGTWSHKK*RSRKVA Trigger: AGCCACCTTTCTGGACCTTCATTTCTTGTGACTCCA...TGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAGCCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | TCTTTCATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTCCATGCCAATGAACTaGCCAAAGTCATGTCCTATG | + |
Preference number: 2 (lower is better) Translates to: SFMFCAFPKSLSKRSGLGSMPMN*PKSCPM Trigger: CATAGGACATGACTTTGGTCAGTTCATTGGCATGGA...GCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | GCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCCATCCAGTCCCAGGACTCGATGTTTTAGCTACTTaGGTAGCATTTCTGACTTCA | + |
Preference number: 2 (lower is better) Translates to: AGWFEASTCILSHPVPGLDVLAT*VAFLTS Trigger: TGAAGTCAGAAATGCTACGCAAGTAGCTAAAACATC...GAGTCCTGGGACTGGATGGCTCAGGATACATGTACTTGCTTCAAACCATCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | TTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACACACGGGACGAAGCACCTTCTTTCATGTTTTGTaGCTTCCCCAAGTCATTAAG | + |
Preference number: 2 (lower is better) Translates to: LRQGAKTDRWRQHTGRSTFFHVL*LPQVIK Trigger: CTTAATGACTTGGGGAAGGCACAAAACATGAAAGAA...GGTGCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCCCAAGCAGCGATTCTTaGCTAAACAATGCAAGCCTG | + |
Preference number: 2 (lower is better) Translates to: HSIISFAYKKTWVGGREFPSSDS*LNNASL Trigger: CAGGCTTGCATTGTTTAGCCAAGAATCGCTGCTTGG...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CAA 90 bp | TTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGACAACCTCTTTGCAGTTATCTGTGTA | + |
Preference number: 2 (lower is better) Translates to: FCAFPKSLSKRSGLG*RVTSNDNLFAVICV Trigger: TACACAGATAACTGCAAAGAGGTTGTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CAA 90 bp | TTCGAGTATTTACGTCTGGGTAAATGCATTGCTGTACAAGATCTCTaGACATGCAGCTCATGCTCTAGGGCTTGGGAATGGAGACTAACA | + |
Preference number: 2 (lower is better) Translates to: FEYLRLGKCIAVQDL*TCSSCSRAWEWRLT Trigger: TGTTAGTCTCCATTCCCAAGCCCTAGAGCATGAGCTGCATGTCAAGAGATCTTGTACAGCAATGCATTTACCCAGACGTAAATACTCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | ATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTAACATTGTATTCAGGTaGTACAGACAAGATGGTCCA | + |
Preference number: 2 (lower is better) Translates to: MFCAFPKSLSKRSGLGLRNIVFR*YRQDGP Trigger: TGGACCATCTTGTCTGTATCACCTGAATACAATGTT...ACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | TGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCCAAATAGTAATATCATaGAGGAGCTACACTGTTACT | + |
Preference number: 2 (lower is better) Translates to: CAFPKSLSKRSGLGLRVTQIVIS*RSYTVT Trigger: AGTAACAGTGTAGCTCCTGCATGATATTACTATTTG...GGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | GCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCCATCCAGTCCCAGGACTCCAAATAGTAATATCATaGAGGAGCTACACTGTTACT | + |
Preference number: 2 (lower is better) Translates to: AGWFEASTCILSHPVPGLQIVIS*RSYTVT Trigger: AGTAACAGTGTAGCTCCTGCATGATATTACTATTTG...GAGTCCTGGGACTGGATGGCTCAGGATACATGTACTTGCTTCAAACCATCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | ATGGCATTTTCCTTCCTTCGCATACCCAAAATATCAGATACACTATTGCTACAGAAAGGCACCCCTCCCTaGCCCACAATTCAACATGCA | + |
Preference number: 2 (lower is better) Translates to: MAFSFLRIPKISDTLLLQKGTPP*PTIQHA Trigger: TGCATGTTGAATTGTGGGGCAGGGAGGGGTGCCTTT...CTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGAAAATGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | CTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACACGATACGTCCAGAAAGGTGGCTaGCATTTAGAAGCACACTAT | + |
Preference number: 2 (lower is better) Translates to: LIRRLGMHLEMVTKGTRYVQKGG*HLEAHY Trigger: ATAGTGTGCTTCTAAATGCCAGCCACCTTTCTGGAC...GTATCGTGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | GACAGACAGATGGAGACAACACACGGGACGAAGCACCTGATTAAACACAGCCTGGCTTTGGGTAATATTTaGCACTCTACCTCTAAAAAT | + |
Preference number: 2 (lower is better) Translates to: DRQMETTHGTKHLIKHSLALGNI*HSTSKN Trigger: ATTTTTAGAGGTAGAGTGCCAAATATTACCCAAAGC...CAGGCTGTGTTTAATCAGGTGCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTGCTTTGGGTAATATTTaGCACTCTACCTCTAAAAAT | + |
Preference number: 2 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLALGNI*HSTSKN Trigger: ATTTTTAGAGGTAGAGTGCCAAATATTACCCAAAGC...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR TCA 90 bp | CATTGGCTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACACGGTTTGCAAGAAAATaGGGCAATCAGTGTTTGGAT | + |
Preference number: 2 (lower is better) Translates to: HWLIRRLGMHLEMVTKGTRFARK*GNQCLD Trigger: ATCCAAACACTGATTGCCTCATTTTCTTGCAAACCG...TGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAGCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218827.2 |
||
3UTR-3UTR GCA 90 bp | TGGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACAAAGTCATGTCCTATaGGATCTAGATAGGATCCCA | + |
Preference number: 2 (lower is better) Translates to: WRQHIELRQGAKTDRWRQQSHVL*DLDRIP Trigger: TGGGATCCTATCTAGATCGCATAGGACATGACTTTG...TTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR GCA 90 bp | ATAAGAGAAATGAAAACAGACCTATACTACATCGGATTCACTGCCCTCTGTAATAGAGTCTCAGAGCATTaGCTGCCAAGCCCGCTATGT | + |
Preference number: 2 (lower is better) Translates to: IREMKTDLYYIGFTALCNRVSEH*LPSPLC Trigger: ACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCT...ATTACAGAGGGCAGTGAATCCGATGTAGTATAGGTCTGTTTTCATTTCTCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | TCTTTCATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCGTTACTAATGGAGCCTaGAGAAACTCTACAGTTGAT | + |
Preference number: 2 (lower is better) Translates to: SFMFCAFPKSLSKRSGLGVTNGA*RNSTVD Trigger: ATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAAC...GCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTGAAGGTCCAGAAAGGTaGCTGGCATTTAGAAGCACA | + |
Preference number: 2 (lower is better) Translates to: GMETNTRLYPITQVTIAFEGPER*LAFRST Trigger: TGTGCTTCTAAATGCCAGCCACCTTTCTGGACCTTC...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | CTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACACGATACGTAGCAGAAGTTTTCTaGTACAATCCTTGGAATGGC | + |
Preference number: 2 (lower is better) Translates to: LIRRLGMHLEMVTKGTRYVAEVF*YNPWNG Trigger: GCCATTCCAAGGATTGTACCAGAAAACTTCTGCTAC...GTATCGTGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | CATTGGCTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACAGAGAAACTCTACAGTTaGTTGTTTCCATTACAGGGT | + |
Preference number: 2 (lower is better) Translates to: HWLIRRLGMHLEMVTKGTEKLYS*LFPLQG Trigger: ACCCTGTAATGGAAACAATCAACTGTAGAGTTTCTC...TGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAGCCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218827.2 |
||
3UTR-3UTR TCA 90 bp | TGGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAAGAGAAACTCTACAGTTaGTTGTTTCCATTACAGGGT | + |
Preference number: 2 (lower is better) Translates to: WRQHIELRQGAKTDRWRQEKLYS*LFPLQG Trigger: ACCCTGTAATGGAAACAATCAACTGTAGAGTTTCTC...TTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR TCA 90 bp | ATGGCATTTTCCTTCCTTCGCATACCCAAAATATCAGATACACTATTGCTACAGTGGAGTCACAAGAAATaGAGGTCCAGAAAGGTGGCT | + |
Preference number: 2 (lower is better) Translates to: MAFSFLRIPKISDTLLLQWSHKK*RSRKVA Trigger: AGCCACCTTTCTGGACCTTCATTTCTTGTGACTCCA...CTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGAAAATGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | ATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTCAAATAGTAATATCATaGAGGAGCTACACTGTTACT | + |
Preference number: 2 (lower is better) Translates to: MFCAFPKSLSKRSGLGLRQIVIS*RSYTVT Trigger: AGTAACAGTGTAGCTCCTGCATGATATTACTATTTG...ACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCTATTGGTCACTGTATTaGAAAAGGAAACTGGGGCAA | + |
Preference number: 2 (lower is better) Translates to: HSIISFAYKKTWVGGREFYWSLY*KRKLGQ Trigger: TTGCCCCAGTTTCCTTTTGCAATACAGTGACCAATA...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR GCA 90 bp | ATTAAACACAGCCTGAAAATTCTGGTTAGTCCTTTGATGCAAATCTTAAGGCTAAAAGGCACCCCTCCCTaGCCCACAATTCAACATGCA | + |
Preference number: 2 (lower is better) Translates to: IKHSLKILVSPLMQILRLKGTPP*PTIQHA Trigger: TGCATGTTGAATTGTGGGGCAGGGAGGGGTGCCTTT...TAGCCTTAAGATTTGCATCAAAGGACTAACCAGAATTTTCAGGCTGTGTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACGCTAAGACAGACAGATaGAGACAACACACGGGACGA | + |
Preference number: 2 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHAKTDR*RQHTGR Trigger: TCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGC...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACATGCGGGACCTCTTCTaGAAACAAACGGGTCACATC | + |
Preference number: 2 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHMRDLF*KQTGHI Trigger: GATGTGACCCGTTTGTTTCCAGAAGAGGTCCCGCAT...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | TGGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACTATTAAAGTCTCCCTaGAGATATGGCTTATGCATT | + |
Preference number: 2 (lower is better) Translates to: WRQHIELRQGAKTDRWRQLLKSP*RYGLCI Trigger: AATGCATAAGCCATATCTTCAGGGAGACTTTAATAG...TTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTATGGAGTCACAAGAAATaGAGGTCCAGAAAGGTGGCT | + |
Preference number: 2 (lower is better) Translates to: LDFYVDTRSLQHSRHADLWSHKK*RSRKVA Trigger: AGCCACCTTTCTGGACCTTCATTTCTTGTGACTCCA...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | ATGGCATTTTCCTTCCTTCGCATACCCAAAATATCAGATACACTATTGCTACAGTCCATGCCAATGAACTaGCCAAAGTCATGTCCTATG | + |
Preference number: 2 (lower is better) Translates to: MAFSFLRIPKISDTLLLQSMPMN*PKSCPM Trigger: CATAGGACATGACTTTGGTCAGTTCATTGGCATGGA...CTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGAAAATGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | ATAAGAGAAATGAAAACAGACCTATACTACATCGGATTCACTGCCCTCTGTAATGATGGTCCATGCCAATaGACTGACCAAAGTCATGTC | + |
Preference number: 2 (lower is better) Translates to: IREMKTDLYYIGFTALCNDGPCQ*TDQSHV Trigger: GACATGACTTTGGTCAGTTCATTGGCATGGACCATC...ATTACAGAGGGCAGTGAATCCGATGTAGTATAGGTCTGTTTTCATTTCTCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCGATGTTTTAGCTACTTaGGTAGCATTTCTGACTTCA | + |
Preference number: 2 (lower is better) Translates to: HSIISFAYKKTWVGGREFDVLAT*VAFLTS Trigger: TGAAGTCAGAAATGCTACGCAAGTAGCTAAAACATC...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | TCGCATACCCAAAATATCAGATACACTATTGCTACAGCATTTGGTAGGGATGTGCAAAGTCATGTCCTATaGGATCTAGATAGGATCCCA | + |
Preference number: 2 (lower is better) Translates to: SHTQNIRYTIATAFGRDVQSHVL*DLDRIP Trigger: TGGGATCCTATCTAGATCGCATAGGACATGACTTTG...CACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | CATTGGCTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACATTCTTTCATGTTTTGTaGCTTCCCCAAGTCATTAAG | + |
Preference number: 2 (lower is better) Translates to: HWLIRRLGMHLEMVTKGTFFHVL*LPQVIK Trigger: CTTAATGACTTGGGGAAGGCACAAAACATGAAAGAA...TGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAGCCAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | TTTAAAGCCAGGATAAGATGTTTTAGCTACTTGCGTAGCATTTCTGACTTCAAATCTCAGAGCATTGCCTaGCAAGCCCGCTATGTTGTT | + |
Preference number: 2 (lower is better) Translates to: FKARIRCFSYLRSISDFKSQSIA*QARYVV Trigger: AACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGA...TTTGAAGTCAGAAATGCTACGCAAGTAGCTAAAACATCTTATCCTGGCTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | GATCCCAGACATCTTCAGAATGGTTTGGAGTCACAAGAAATGAAGGTCCAGAAAGTTACTAATGGAGCCTaGAGAAACTCTACAGTTGAT | + |
Preference number: 2 (lower is better) Translates to: DPRHLQNGLESQEMKVQKVTNGA*RNSTVD Trigger: ATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAAC...TTTCTGGACCTTCATTTCTTGTGACTCCAAACCATTCTGAAGATGTCTGGGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | TGGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAATATGCATTAGTGCACTaGCCAATATCTGACACTATT | + |
Preference number: 2 (lower is better) Translates to: WRQHIELRQGAKTDRWRQYALVH*PISDTI Trigger: AATAGTGTCAGATATTGGCCAGTGCACTAATGCATA...TTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | ATGGCATTTTCCTTCCTTCGCATACCCAAAATATCAGATACACTATTGCTACAGGTCCAGAAAGGTGGCTaGCATTTAGAAGCACACTAT | + |
Preference number: 2 (lower is better) Translates to: MAFSFLRIPKISDTLLLQVQKGG*HLEAHY Trigger: ATAGTGTGCTTCTAAATGCCAGCCACCTTTCTGGAC...CTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGAAAATGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTAGAAGGTCCAGAAAGGTaGCTGGCATTTAGAAGCACA | + |
Preference number: 2 (lower is better) Translates to: LDFYVDTRSLQHSRHADLEGPER*LAFRST Trigger: TGTGCTTCTAAATGCCAGCCACCTTTCTGGACCTTC...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTCACGTCTACCCTCTATaGAGACAGCATATAGAGTTA | + |
Preference number: 2 (lower is better) Translates to: GMETNTRLYPITQVTIAFHVYPL*RQHIEL Trigger: TAACTCTATATGCTGTCTCCATAGAGGGTAGACGTG...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | ATAAGAGAAATGAAAACAGACCTATACTACATCGGATTCACTGCCCTCTGTAATTCTAGGGCTTGGGAATaGAGACTAACACACGTCTCT | + |
Preference number: 2 (lower is better) Translates to: IREMKTDLYYIGFTALCNSRAWE*RLTHVS Trigger: AGAGACGTGTGTTAGTCTCCATTCCCAAGCCCTAGA...ATTACAGAGGGCAGTGAATCCGATGTAGTATAGGTCTGTTTTCATTTCTCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTATCTAGGGCTTGGGAATaGAGACTAACACACGTCTCT | + |
Preference number: 2 (lower is better) Translates to: LDFYVDTRSLQHSRHADLSRAWE*RLTHVS Trigger: AGAGACGTGTGTTAGTCTCCATTCCCAAGCCCTAGA...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | ATAAGAGAAATGAAAACAGACCTATACTACATCGGATTCACTGCCCTCTGTAATGTCCATGCACACGGTTaGTATTTACAGCTGTTCCGT | + |
Preference number: 2 (lower is better) Translates to: IREMKTDLYYIGFTALCNVHAHG*YLQLFR Trigger: ACGGAACAGCTGTAAATACCAACCGTGTGCATGGAC...ATTACAGAGGGCAGTGAATCCGATGTAGTATAGGTCTGTTTTCATTTCTCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CAA 90 bp | ATGGCATTTTCCTTCCTTCGCATACCCAAAATATCAGATACACTATaGCTACAGCATTTGGTAGGGATGTGTAAACAGACTATCTTCCCT | + |
Preference number: 2 (lower is better) Translates to: MAFSFLRIPKISDTL*LQHLVGMCKQTIFP Trigger: AGGGAAGATAGTCTGTTTACACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGAAAATGCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR TCA 90 bp | TCGCATACCCAAAATATCAGATACACTATTGCTACAGCATTTGGTAGGGATGTGATTTGCAGGATGGTTTaGAGCAAGTACATGTATCCT | + |
Preference number: 2 (lower is better) Translates to: SHTQNIRYTIATAFGRDVICRMV*SKYMYP Trigger: AGGATACATGTACTTGCTTCAAACCATCCTGCAAAT...CACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | ATAAGAGAAATGAAAACAGACCTATACTACATCGGATTCACTGCCCTCTGTAATAAATGCCTCATAAGATaGGGGACCTCTTCTGGAAAC | + |
Preference number: 2 (lower is better) Translates to: IREMKTDLYYIGFTALCNKCLIR*GTSSGN Trigger: GTTTCCAGAAGAGGTCCCGCATCTTATGAGGCATTT...ATTACAGAGGGCAGTGAATCCGATGTAGTATAGGTCTGTTTTCATTTCTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTGTTACTAATGGAGCCTaGAGAAACTCTACAGTTGAT | + |
Preference number: 2 (lower is better) Translates to: GMETNTRLYPITQVTIAFVTNGA*RNSTVD Trigger: ATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAAC...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CCA 90 bp | ATGGCATTTTCCTTCCTTCGCATACCCAAAATATCAGATACACTATTGCTACAGCACGTCTACCCTCTATaGAGACAGCATATAGAGTTA | + |
Preference number: 2 (lower is better) Translates to: MAFSFLRIPKISDTLLLQHVYPL*RQHIEL Trigger: TAACTCTATATGCTGTCTCCATAGAGGGTAGACGTG...CTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGAAAATGCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR TCA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACCGGTTTGCAAGAAAATaGGGCAATCAGTGTTTGGAT | + |
Preference number: 2 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHRFARK*GNQCLD Trigger: ATCCAAACACTGATTGCCTCATTTTCTTGCAAACCG...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR GCA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTTTCTTTCATGTTTTGTaGCTTCCCCAAGTCATTAAG | + |
Preference number: 2 (lower is better) Translates to: GMETNTRLYPITQVTIAFFFHVL*LPQVIK Trigger: CTTAATGACTTGGGGAAGGCACAAAACATGAAAGAA...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTTATGCATTAGTGCACTaGCCAATATCTGACACTATT | + |
Preference number: 2 (lower is better) Translates to: GMETNTRLYPITQVTIAFYALVH*PISDTI Trigger: AATAGTGTCAGATATTGGCCAGTGCACTAATGCATA...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR TCA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACGAGAAACTCTACAGTTaGTTGTTTCCATTACAGGGT | + |
Preference number: 2 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHEKLYS*LFPLQG Trigger: ACCCTGTAATGGAAACAATCAACTGTAGAGTTTCTC...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR TCA 90 bp | ATAAGAGAAATGAAAACAGACCTATACTACATCGGATTCACTGCCCTCTGTAATATTTGCAGGATGGTTTaGAGCAAGTACATGTATCCT | + |
Preference number: 2 (lower is better) Translates to: IREMKTDLYYIGFTALCNICRMV*SKYMYP Trigger: AGGATACATGTACTTGCTTCAAACCATCCTGCAAAT...ATTACAGAGGGCAGTGAATCCGATGTAGTATAGGTCTGTTTTCATTTCTCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR TCA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACCTATTAAAGTCTCCCTaGAGATATGGCTTATGCATT | + |
Preference number: 2 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHLLKSP*RYGLCI Trigger: AATGCATAAGCCATATCTTCAGGGAGACTTTAATAG...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTACACGTGACCAAGAAATaGTTAGATTTCTATGTAGAC | + |
Preference number: 2 (lower is better) Translates to: LDFYVDTRSLQHSRHADLHVTKK*LDFYVD Trigger: GTCTACATAGAAATCTAACCATTTCTTGGTCACGTG...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CCA 90 bp | ATTAAACACAGCCTGAAAATTCTGGTTAGTCCTTTGATGCAAATCTTAAGGCTACAGACATCTTCAGAATaGTTTGGAGTCACAAGAAAT | + |
Preference number: 2 (lower is better) Translates to: IKHSLKILVSPLMQILRLQTSSE*FGVTRN Trigger: ATTTCTTGTGACTCCAAACCATTCTGAAGATGTCTG...TAGCCTTAAGATTTGCATCAAAGGACTAACCAGAATTTTCAGGCTGTGTTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR CCA 72 bp | CCTCAGAGGACACGGAGAGTTGTAGGGGGACGTTACTaGAGAGAGTCTCAGAGCATTGCCTGCCAAGCCCGC | + |
Preference number: 3 (lower is better) Translates to: PQRTRRVVGGRY*RESQSIACQAR Trigger: GCGGGCTTGGCAGGCAATGCTCTGAGACTCTCTCCAGTAACGTCCCCCTACAACTCTCCGTGTCCTCTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
||
3UTR TCA 72 bp | CTGAGAGGAGCCATTCAGAGCCTTGCGGGCATTCCTTaGAGCCCCACAGACGCTGACCATGAATGTGGCGTC | + |
Preference number: 3 (lower is better) Translates to: LRGAIQSLAGIP*SPTDADHECGV Trigger: GACGCCACATTCATGGTCAGCGTCTGTGGGGCTTCAAGGAATGCCCGCAAGGCTCTGAATGGCTCCTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR GCA 72 bp | TGTAGGGGGACGTTACTGGAGAGAGTCTCAGAGCATTaGCTGCCAAGCCCGCTATGTTGTTTAAGCTTCGGG | + |
Preference number: 3 (lower is better) Translates to: CRGTLLERVSEH*LPSPLCCLSFG Trigger: CCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCTCTCCAGTAACGTCCCCCTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
||
3UTR TCA 72 bp | TCTGATGTCTGTGGCGTCTCACTGTCTATGAGACGGTaGGAGTGGGCAGGTCCATGCACACGGTTGGTATTT | + |
Preference number: 3 (lower is better) Translates to: SDVCGVSLSMRR*EWAGPCTRLVF Trigger: AAATACCAACCGTGTGCATGGACCTGCCCACTCTCACCGTCTCATAGACAGTGAGACGCCACAGACATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR CCA 72 bp | TTTAGCCGATTGATGCAGTTTGGTTTACAAGATAGATaGGATGGGAGACCGAGAGCGCCTCAGAGGACACGG | + |
Preference number: 3 (lower is better) Translates to: FSRLMQFGLQDR*DGRPRAPQRTR Trigger: CCGTGTCCTCTGAGGCGCTCTCGGTCTCCCATCCCATCTATCTTGTAAACCAAACTGCATCAATCGGCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
||
3UTR-3UTR CAA 90 bp | GACAGACAGATGGAGACAACACACGGGACGAAGCACCTGATTAAACACAGCCTGACCAAGCAGCGATTCTaGGCTAAACAATGCAAGCCT | + |
Preference number: 3 (lower is better) Translates to: DRQMETTHGTKHLIKHSLTKQRF*AKQCKP Trigger: AGGCTTGCATTGTTTAGCCAAGAATCGCTGCTTGGT...CAGGCTGTGTTTAATCAGGTGCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR TCA 72 bp | ACAGGCTCCCAGCGATTTCACATTTGCAGGATGGTTTaGAGCAAGTACATGTATCCTGAGCCATCCAGTCCC | + |
Preference number: 3 (lower is better) Translates to: TGSQRFHICRMV*SKYMYPEPSSP Trigger: GGGACTGGATGGCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGGGAGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CCA 72 bp | GGTCCATGCACACGGTTGGTATTTACAGCTGTTCCGTaGACTCAGGTCTGTCGACAAGCAGAATATTCCCAT | + |
Preference number: 3 (lower is better) Translates to: GPCTRLVFTAVP*TQVCRQAEYSH Trigger: ATGGGAATATTCTGCTTGTCGACAGACCTGAGTCCACGGAACAGCTGTAAATACCAACCGTGTGCATGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CCA 72 bp | CTAACCACTTCAGTCAGGACCCCATCCTCTGACCTCTaGAGGCAGTCATGCATTGTAGCATTTTTCAGCAGA | + |
Preference number: 3 (lower is better) Translates to: LTTSVRTPSSDL*RQSCIVAFFSR Trigger: TCTGCTGAAAAATGCTACAATGCATGACTGCCTCCAGAGGTCAGAGGATGGGGTCCTGACTGAAGTGGTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219301.2 |
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3UTR-3UTR CAA 90 bp | GACAGACAGATGGAGACAACACACGGGACGAAGCACCTGATTAAACACAGCCTGCTGGGGCAACTTGTCTaGAGTAGTAGCACTACTTTA | + |
Preference number: 3 (lower is better) Translates to: DRQMETTHGTKHLIKHSLLGQLV*SSSTTL Trigger: TAAAGTAGTGCTACTACTCAAGACAAGTTGCCCCAG...CAGGCTGTGTTTAATCAGGTGCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | GACAGACAGATGGAGACAACACACGGGACGAAGCACCTGATTAAACACAGCCTGCCAGCGATTTCACATTaGCAGGATGGTTTGAAGCAA | + |
Preference number: 3 (lower is better) Translates to: DRQMETTHGTKHLIKHSLPAISH*QDGLKQ Trigger: TTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGG...CAGGCTGTGTTTAATCAGGTGCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | GATATGGCTTATGCATTAGTGCACTGGCCAATATCTGACACTATTGGTCACTGTGAGAGTCTCAGAGCATaGCCTGCCAAGCCCGCTATG | + |
Preference number: 3 (lower is better) Translates to: DMAYALVHWPISDTIGHCESLRA*PAKPAM Trigger: CATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCTC...ACAGTGACCAATAGTGTCAGATATTGGCCAGTGCACTAATGCATAAGCCATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR TCA 72 bp | GTTTTCCCTAACCACTTCAGTCAGGACCCCATCCTCTaGCCTCTGGAGGCAGTCATGCATTGTAGCATTTTT | + |
Preference number: 3 (lower is better) Translates to: VFPNHFSQDPIL*PLEAVMHCSIF Trigger: AAAAATGCTACAATGCATGACTGCCTCCAGAGGTCAGAGGATGGGGTCCTGACTGAAGTGGTTAGGGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219301.2 |
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3UTR CCA 72 bp | CTCAGAGACCTTAAACAGCTTCTCAGGAACATTAGCTaGCTTGTTTTCCCTAACCACTTCAGTCAGGACCCC | + |
Preference number: 3 (lower is better) Translates to: LRDLKQLLRNIS*LVFPNHFSQDP Trigger: GGGGTCCTGACTGAAGTGGTTAGGGAAAACAAGCCAGCTAATGTTCCTGAGAAGCTGTTTAAGGTCTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219301.2 |
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3UTR-3UTR CAA 90 bp | TGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCGGAGAAACTCTACAGTaGATTGTTTCCATTACAGGG | + |
Preference number: 3 (lower is better) Translates to: CAFPKSLSKRSGLGLRVTGETLQ*IVSITG Trigger: CCCTGTAATGGAAACAATCAACTGTAGAGTTTCTCC...GGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | ATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTCTATTGGTCACTGTATaGCAAAAGGAAACTGGGGCA | + |
Preference number: 3 (lower is better) Translates to: MFCAFPKSLSKRSGLGLRLLVTV*QKETGA Trigger: TGCCCCAGTTTCCTTTTGCAATACAGTGACCAATAG...ACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 72 bp | TACGTCTGGGTAAATGCATTGCTGTACAAGATCTCTTaGCATGCAGCTCATGCTCTAGGGCTTGGGAATGGA | + |
Preference number: 3 (lower is better) Translates to: YVWVNALLYKIS*HAAHALGLGNG Trigger: TCCATTCCCAAGCCCTAGAGCATGAGCTGCATGTCAAGAGATCTTGTACAGCAATGCATTTACCCAGACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR GCA 72 bp | CTGGGTAAATGCATTGCTGTACAAGATCTCTTGACATaGAGCTCATGCTCTAGGGCTTGGGAATGGAGACTA | + |
Preference number: 3 (lower is better) Translates to: LGKCIAVQDLLT*SSCSRAWEWRL Trigger: TAGTCTCCATTCCCAAGCCCTAGAGCATGAGCTGCATGTCAAGAGATCTTGTACAGCAATGCATTTACCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC | + |
Preference number: 3 (lower is better) Translates to: GMETNTRLYPITQVTIAFRSGLG*RVTSND Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | AAGGACACTTGTGACAAAAATGTAAATGAACAGTTGTGCCACTCAGGTCCTGAAAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGAC | + |
Preference number: 3 (lower is better) Translates to: KDTCDKNVNEQLCHSGPERSGLG*RVTSND Trigger: GTCATTACTGGTTACACGCAAGCCGAGGCCAGATCT...TTCAGGACCTGAGTGGCACAACTGTTCATTTACATTTTTGTCACAAGTGTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | CATTGGCTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACAGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTT | + |
Preference number: 3 (lower is better) Translates to: HWLIRRLGMHLEMVTKGTAKPAM*FKLRDF Trigger: AAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGC...TGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAGCCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR CCA 72 bp | AGTTCAAAGAGACAATCAGGGCACGTCTACCCTCTATaGAGACAGCATATAGAGTTAAGACAGGGAGCTAAG | + |
Preference number: 3 (lower is better) Translates to: SSKRQSGHVYPL*RQHIELRQGAK Trigger: CTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCATAGAGGGTAGACGTGCCCTGATTGTCTCTTTGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | TCTTTCATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCGGAGAAACTCTACAGTaGATTGTTTCCATTACAGGG | + |
Preference number: 3 (lower is better) Translates to: SFMFCAFPKSLSKRSGLGGETLQ*IVSITG Trigger: CCCTGTAATGGAAACAATCAACTGTAGAGTTTCTCC...GCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | TCTTTCATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCCATTTGCAGGATGGTTaGAAGCAAGTACATGTATCC | + |
Preference number: 3 (lower is better) Translates to: SFMFCAFPKSLSKRSGLGHLQDG*KQVHVS Trigger: GGATACATGTACTTGCTTCAAACCATCCTGCAAATG...GCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 72 bp | CATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTaGGCCATCCAGTCCCAGGACTCTACAACATTGTAT | + |
Preference number: 3 (lower is better) Translates to: HLQDGLKQVHVS*AIQSQDSTTLY Trigger: ATACAATGTTGTAGAGTCCTGGGACTGGATGGCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 72 bp | TCTTGGGAATGTGTAAGTGTGTGTGCTGTAGAACCATaGAGCAGAACAACAGCCAAGCCACTGAAATCGAAA | + |
Preference number: 3 (lower is better) Translates to: SWECVSVCAVEP*SRTTAKPLKSK Trigger: TTTCGATTTCAGTGGCTTGGCTGTTGTTCTGCTTCATGGTTCTACAGCACACACACTTACACATTCCCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR CCA 72 bp | TGGTTTGGAGTCACAAGAAATGAAGGTCCAGAAAGGTaGCTGGCATTTAGAAGCACACTATTAAAGTCTCCC | + |
Preference number: 3 (lower is better) Translates to: WFGVTRNEGPER*LAFRSTLLKSP Trigger: GGGAGACTTTAATAGTGTGCTTCTAAATGCCAGCCACCTTTCTGGACCTTCATTTCTTGTGACTCCAAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | TGGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACATTTGCAGGATGGTTaGAAGCAAGTACATGTATCC | + |
Preference number: 3 (lower is better) Translates to: WRQHIELRQGAKTDRWRQHLQDG*KQVHVS Trigger: GGATACATGTACTTGCTTCAAACCATCCTGCAAATG...TTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 72 bp | TGGCTGGCATTTAGAAGCACACTATTAAAGTCTCCCTaGAGATATGGCTTATGCATTAGTGCACTGGCCAAT | + |
Preference number: 3 (lower is better) Translates to: WLAFRSTLLKSP*RYGLCISALAN Trigger: ATTGGCCAGTGCACTAATGCATAAGCCATATCTTCAGGGAGACTTTAATAGTGTGCTTCTAAATGCCAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 72 bp | GTCGACACGCTGATCTATAAGCGGTTTGCAAGAAAATaGGGCAATCAGTGTTTGGATATCCAACACGTAATG | + |
Preference number: 3 (lower is better) Translates to: VDTLIYKRFARK*GNQCLDIQHVM Trigger: CATTACGTGTTGGATATCCAAACACTGATTGCCTCATTTTCTTGCAAACCGCTTATAGATCAGCGTGTCGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CCA 72 bp | CTACACAGCATCATTAGTTTTGCATACAAGAAGACATaGGTAGGAGGTAGGGAGTTCAAAGAGACAATCAGG | + |
Preference number: 3 (lower is better) Translates to: LHSIISFAYKKT*VGGREFKETIR Trigger: CCTGATTGTCTCTTTGAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | TCTTTCATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCCAATATCTGACACTATaGGTCACTGTATTGCAAAAG | + |
Preference number: 3 (lower is better) Translates to: SFMFCAFPKSLSKRSGLGQYLTL*VTVLQK Trigger: CTTTTGCAATACAGTGACCAATAGTGTCAGATATTG...GCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTCCAGCGATTTCACATTaGCAGGATGGTTTGAAGCAA | + |
Preference number: 3 (lower is better) Translates to: GMETNTRLYPITQVTIAFPAISH*QDGLKQ Trigger: TTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGG...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR TCA 72 bp | CTCTTGTTGTCATTAGCACTGAACAGCTTGAGAGACTaGAACTCGCATGCAGATACATTATTAAAAGAGGGG | + |
Preference number: 3 (lower is better) Translates to: LLLSLALNSLRD*NSHADTLLKEG Trigger: CCCCTCTTTTAATAATGTATCTGCATGCGAGTTTCAGTCTCTCAAGCTGTTCAGTGCTAATGACAACAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR CCA 72 bp | ATATCATGCAGGAGCTACACTGTTACTAATGGAGCCTaGAGAAACTCTACAGTTGATTGTTTCCATTACAGG | + |
Preference number: 3 (lower is better) Translates to: ISCRSYTVTNGA*RNSTVDCFHYR Trigger: CCTGTAATGGAAACAATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAACAGTGTAGCTCCTGCATGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR CCA 72 bp | ATTGTGTATGGTAAGTTTATTCATATCCCTGCAATATaGCTGGGATGCCAGCTATGTTCGTCATGTGTAGGA | + |
Preference number: 3 (lower is better) Translates to: IVYGKFIHIPAI*LGCQLCSSCVG Trigger: TCCTACACATGACGAACATAGCTGGCATCCCAGCCATATTGCAGGGATATGAATAAACTTACCATACACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCCAATATCTGACACTATaGGTCACTGTATTGCAAAAG | + |
Preference number: 3 (lower is better) Translates to: HSIISFAYKKTWVGGREFQYLTL*VTVLQK Trigger: CTTTTGCAATACAGTGACCAATAGTGTCAGATATTG...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | ATGGCATTTTCCTTCCTTCGCATACCCAAAATATCAGATACACTATTGCTACAGCCAGCGATTTCACATTaGCAGGATGGTTTGAAGCAA | + |
Preference number: 3 (lower is better) Translates to: MAFSFLRIPKISDTLLLQPAISH*QDGLKQ Trigger: TTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGG...CTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGAAAATGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | TGGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAAGTAATGACAACCTCTTaGCAGTTATCTGTGTATACA | + |
Preference number: 3 (lower is better) Translates to: WRQHIELRQGAKTDRWRQVMTTS*QLSVYT Trigger: TGTATACACAGATAACTGCAAAGAGGTTGTCATTAC...TTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CAA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCATTCTGGTTAGTCCTTaGATGCAAATCTTAAGGCTA | + |
Preference number: 3 (lower is better) Translates to: HSIISFAYKKTWVGGREFILVSP*MQILRL Trigger: TAGCCTTAAGATTTGCATCAAAGGACTAACCAGAAT...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CAA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACGCTGTACAAGATCTCTaGACATGCAGCTCATGCTCT | + |
Preference number: 3 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHAVQDL*TCSSCS Trigger: AGAGCATGAGCTGCATGTCAAGAGATCTTGTACAGC...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR TCA 72 bp | AGATATGGCTTATGCATTAGTGCACTGGCCAATATCTaGCACTATTGGTCACTGTATTGCAAAAGGAAACTG | + |
Preference number: 3 (lower is better) Translates to: RYGLCISALANI*HYWSLYCKRKL Trigger: CAGTTTCCTTTTGCAATACAGTGACCAATAGTGTCAGATATTGGCCAGTGCACTAATGCATAAGCCATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CAA 90 bp | ATTAAACACAGCCTGAAAATTCTGGTTAGTCCTTTGATGCAAATCTTAAGGCTACTATTGGTCACTGTATaGCAAAAGGAAACTGGGGCA | + |
Preference number: 3 (lower is better) Translates to: IKHSLKILVSPLMQILRLLLVTV*QKETGA Trigger: TGCCCCAGTTTCCTTTTGCAATACAGTGACCAATAG...TAGCCTTAAGATTTGCATCAAAGGACTAACCAGAATTTTCAGGCTGTGTTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | TCGCATACCCAAAATATCAGATACACTATTGCTACAGCATTTGGTAGGGATGTGGTAATGACAACCTCTTaGCAGTTATCTGTGTATACA | + |
Preference number: 3 (lower is better) Translates to: SHTQNIRYTIATAFGRDVVMTTS*QLSVYT Trigger: TGTATACACAGATAACTGCAAAGAGGTTGTCATTAC...CACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CAA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGATGTTTTAGCTACTaGCGTAGCATTTCTGACTTC | + |
Preference number: 3 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHRCFSY*RSISDF Trigger: GAAGTCAGAAATGCTACGCAAGTAGCTAAAACATCT...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTAAGATGTTTTAGCTACTaGCGTAGCATTTCTGACTTC | + |
Preference number: 3 (lower is better) Translates to: LDFYVDTRSLQHSRHADLRCFSY*RSISDF Trigger: GAAGTCAGAAATGCTACGCAAGTAGCTAAAACATCT...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CAA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTACAATATCTGACACTATaGGTCACTGTATTGCAAAAG | + |
Preference number: 3 (lower is better) Translates to: LDFYVDTRSLQHSRHADLQYLTL*VTVLQK Trigger: CTTTTGCAATACAGTGACCAATAGTGTCAGATATTG...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR-3UTR CAA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTAATTCTGGTTAGTCCTTaGATGCAAATCTTAAGGCTA | + |
Preference number: 3 (lower is better) Translates to: LDFYVDTRSLQHSRHADLILVSP*MQILRL Trigger: TAGCCTTAAGATTTGCATCAAAGGACTAACCAGAAT...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
||
3UTR-3UTR CAA 90 bp | ATTAAACACAGCCTGAAAATTCTGGTTAGTCCTTTGATGCAAATCTTAAGGCTAGTAATGACAACCTCTTaGCAGTTATCTGTGTATACA | + |
Preference number: 3 (lower is better) Translates to: IKHSLKILVSPLMQILRLVMTTS*QLSVYT Trigger: TGTATACACAGATAACTGCAAAGAGGTTGTCATTAC...TAGCCTTAAGATTTGCATCAAAGGACTAACCAGAATTTTCAGGCTGTGTTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CCA 72 bp | AGCCTTCCAGAACTAAATGAACACGTGACCAAGAAATaGTTAGATTTCTATGTAGACACTAGAAGTTTACAA | + |
Preference number: 3 (lower is better) Translates to: SLPELNEHVTKK*LDFYVDTRSLQ Trigger: TTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTGTTCATTTAGTTCTGGAAGGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR GCA 90 bp | TGGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAAGGAGGGGGCAGCGGTTaGAGCTTGTCCCCGGCCGCA | + |
Preference number: 4 (lower is better) Translates to: WRQHIELRQGAKTDRWRQGGGSG*SLSPAA Trigger: TGCGGCCGGGGACAAGCTGCAACCGCTGCCCCCTCC...TTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR GCA 90 bp | CCCAGCGATTTCACATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCGCCCACATGCGAGGCTaGAGCTTCCTCCAGCGGCCT | + |
Preference number: 4 (lower is better) Translates to: PSDFTFAGWFEASTCILSAHMRG*SFLQRP Trigger: AGGCCGCTGGAGGAAGCTGCAGCCTCGCATGTGGGC...GCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR CCA 90 bp | GATATGGCTTATGCATTAGTGCACTGGCCAATATCTGACACTATTGGTCACTGTCAAGGGAGGCGGTCGTaGCGGCGGAGACAGCGGAGG | + |
Preference number: 4 (lower is better) Translates to: DMAYALVHWPISDTIGHCQGRRS*RRRQRR Trigger: CCTCCGCTGTCTCCGCCGCCACGACCGCCTCCCTTG...ACAGTGACCAATAGTGTCAGATATTGGCCAGTGCACTAATGCATAAGCCATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR TCA 90 bp | GCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCCATCCAGTCCCAGGACTCCCCCACCAACATCCCTaGCCATGTTTGGGGGTACAT | + |
Preference number: 4 (lower is better) Translates to: AGWFEASTCILSHPVPGLPHQHP*PCLGVH Trigger: ATGTACCCCCAAACATGGTCAGGGATGTTGGTGGGG...GAGTCCTGGGACTGGATGGCTCAGGATACATGTACTTGCTTCAAACCATCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTCCGCAGCATCCTCAATaGCCAATCTCTTGGCCGCTA | + |
Preference number: 4 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLPQHPQ*PISWPL Trigger: TAGCGGCCAAGAGATTGGGCATTGAGGATGCTGCGG...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR GCA 90 bp | GATCCCAGACATCTTCAGAATGGTTTGGAGTCACAAGAAATGAAGGTCCAGAAACGAACTGCAGTTGCCTaGGCCGCCCTCGAAGCAGCC | + |
Preference number: 4 (lower is better) Translates to: DPRHLQNGLESQEMKVQKRTAVA*AALEAA Trigger: GGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCG...TTTCTGGACCTTCATTTCTTGTGACTCCAAACCATTCTGAAGATGTCTGGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR CCA 90 bp | GATCCCAGACATCTTCAGAATGGTTTGGAGTCACAAGAAATGAAGGTCCAGAAACCTCGAAGCAGCCGCTaGGGACAGGGGACAAGGGAG | + |
Preference number: 4 (lower is better) Translates to: DPRHLQNGLESQEMKVQKPRSSR*GQGTRE Trigger: CTCCCTTGTCCCCTGTCCCCAGCGGCTGCTTCGAGG...TTTCTGGACCTTCATTTCTTGTGACTCCAAACCATTCTGAAGATGTCTGGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR GCA 90 bp | AGCTACACTGTTACTAATGGAGCCTGGAGAAACTCTACAGTTGATTGTTTCCATCGTGCGAACTGCAGTTaGCTGCGCCGCCCTCGAAGC | + |
Preference number: 4 (lower is better) Translates to: SYTVTNGAWRNSTVDCFHRANCS*LRRPRS Trigger: GCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACG...ATGGAAACAATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAACAGTGTAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR GCA 90 bp | AGCTACACTGTTACTAATGGAGCCTGGAGAAACTCTACAGTTGATTGTTTCCATCCGCCGTTGCCACCGTaGGAACTGCAGTTGCCTGCG | + |
Preference number: 4 (lower is better) Translates to: SYTVTNGAWRNSTVDCFHPPLPP*ELQLPA Trigger: CGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGG...ATGGAAACAATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAACAGTGTAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR GCA 90 bp | TGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTTGCGTGTAACCTCTCAGAGCATTGCCTaGCAAGCCCGCTATGTTGTT | + |
Preference number: 4 (lower is better) Translates to: CAFPKSLSKRSGLGLRVTSQSIA*QARYVV Trigger: AACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGA...GGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | CCCAGCGATTTCACATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCCAAAAAGAGCCCACATaGGAGGCTGCAGCTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: PSDFTFAGWFEASTCILSQKEPT*EAAASS Trigger: GGAGGAAGCTGCAGCCTCGCATGTGGGCTCTTTTTG...GCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR GCA 90 bp | GAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACACACGGGACGAAGCGAAGCCGGTTTTCTTTaGCCAGACATGTGTCACTCT | + |
Preference number: 4 (lower is better) Translates to: ELRQGAKTDRWRQHTGRSEAGFL*PDMCHS Trigger: AGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTC...GCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR TCA 90 bp | GATATGGCTTATGCATTAGTGCACTGGCCAATATCTGACACTATTGGTCACTGTTTCCAGGCAGGGTCTTaGGGGTGCTGCGGTAGGTTT | + |
Preference number: 4 (lower is better) Translates to: DMAYALVHWPISDTIGHCFQAGS*GCCGRF Trigger: AAACCTACCGCAGCACCCTCAAGACCCTGCCTGGAA...ACAGTGACCAATAGTGTCAGATATTGGCCAGTGCACTAATGCATAAGCCATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR TCA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTGTCAGGCAGTCGCCCTaGGGTTCAGAGGAGGCAAGA | + |
Preference number: 4 (lower is better) Translates to: GMETNTRLYPITQVTIAFVRQSP*GSEEAR Trigger: TCTTGCCTCCTCTGAACCTCAGGGCGACTGCCTGAC...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR TCA 90 bp | TCGCATACCCAAAATATCAGATACACTATTGCTACAGCATTTGGTAGGGATGTGTGGAGGACAGCCCGCTaGGTCCCACCTCTAGGTAGA | + |
Preference number: 4 (lower is better) Translates to: SHTQNIRYTIATAFGRDVWRTAR*VPPLGR Trigger: TCTACCTAGAGGTGGGACTCAGCGGGCTGTCCTCCA...CACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR TCA 90 bp | TCGCATACCCAAAATATCAGATACACTATTGCTACAGCATTTGGTAGGGATGTGGAAGGGTCATTGGGCTaGGCCCCTACTCTCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: SHTQNIRYTIATAFGRDVEGSLG*APTLSA Trigger: CGCTGAGAGAGTAGGGGCTCAGCCCAATGACCCTTC...CACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR TCA 90 bp | CATTGGCTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACACCCCACCAACATCCCTaGCCATGTTTGGGGGTACAT | + |
Preference number: 4 (lower is better) Translates to: HWLIRRLGMHLEMVTKGTPHQHP*PCLGVH Trigger: ATGTACCCCCAAACATGGTCAGGGATGTTGGTGGGG...TGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAGCCAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR TCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTTTTCATATCCTTTCCTaGTTCCTCCATCAGAAGCGC | + |
Preference number: 4 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLFHILS*FLHQKR Trigger: GCGCTTCTGATGGAGGAATCAGGAAAGGATATGAAA...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | GCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCCATCCAGTCCCAGGACTCGGGATGTTTTTGAACTaGGTGTGCTCACTAGCTGAA | + |
Preference number: 4 (lower is better) Translates to: AGWFEASTCILSHPVPGLGMFLN*VCSLAE Trigger: TTCAGCTAGTGAGCACACGCAGTTCAAAAACATCCC...GAGTCCTGGGACTGGATGGCTCAGGATACATGTACTTGCTTCAAACCATCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | ACAAGCAGAATATTCCCATGGCGAGCACCATCTCAGTTCCAGCCACAGTCCCTTTTTCTTGGAAGTTTCTaGTTCGCCATTGCCAAGGAG | + |
Preference number: 4 (lower is better) Translates to: TSRIFPWRAPSQFQPQSLFLGSF*FAIAKE Trigger: CTCCTTGGCAATGGCGAAGCAGAAACTTCCAAGAAA...AAGGGACTGTGGCTGGAACTGAGATGGTGCTCGCCATGGGAATATTCTGCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR GCA 90 bp | CCCAGCGATTTCACATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCAGAGTCTCAGAGCATTaGCTGCCAAGCCCGCTATGT | + |
Preference number: 4 (lower is better) Translates to: PSDFTFAGWFEASTCILSRVSEH*LPSPLC Trigger: ACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCT...GCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR TCA 90 bp | TCGCATACCCAAAATATCAGATACACTATTGCTACAGCATTTGGTAGGGATGTGTGGTACCCCCGACATTaGGGATCACCCTCTCGTTGC | + |
Preference number: 4 (lower is better) Translates to: SHTQNIRYTIATAFGRDVWYPRH*GSPSRC Trigger: GCAACGAGAGGGTGATCCTCAATGTCGGGGGTACCA...CACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR TCA 90 bp | TTTAAAGCCAGGATAAGATGTTTTAGCTACTTGCGTAGCATTTCTGACTTCAAACTTCCTCCAGCGGCCTaGCTTGCCATCGGGTCCTCC | + |
Preference number: 4 (lower is better) Translates to: FKARIRCFSYLRSISDFKLPPAA*LAIGSS Trigger: GGAGGACCCGATGGCAAGTCAGGCCGCTGGAGGAAG...TTTGAAGTCAGAAATGCTACGCAAGTAGCTAAAACATCTTATCCTGGCTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR GCA 90 bp | CATTGGCTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACAAAATGTAGGCGAGCTTaGCAGAGGGGCAGGAGGAAT | + |
Preference number: 4 (lower is better) Translates to: HWLIRRLGMHLEMVTKGTKCRRA*QRGRRN Trigger: ATTCCTCCTGCCCCTCTGGCAAGCTCGCCTACATTT...TGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAGCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218827.2 |
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CDS-3UTR GCA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCAAATGTAGGCGAGCTTaGCAGAGGGGCAGGAGGAAT | + |
Preference number: 4 (lower is better) Translates to: HSIISFAYKKTWVGGREFKCRRA*QRGRRN Trigger: ATTCCTCCTGCCCCTCTGGCAAGCTCGCCTACATTT...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR TCA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTAGAAGGGTCATTGGGCTaGGCCCCTACTCTCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: LDFYVDTRSLQHSRHADLEGSLG*APTLSA Trigger: CGCTGAGAGAGTAGGGGCTCAGCCCAATGACCCTTC...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR CCA 90 bp | CATTGGCTTATCAGAAGGTTAGGCATGCACCTTGAGATGGTCACAAAAGGTACAGCGAATACTCCTGGGTaGCGATCGAAGAAGAATTCG | + |
Preference number: 4 (lower is better) Translates to: HWLIRRLGMHLEMVTKGTANTPG*RSKKNS Trigger: CGAATTCTTCTTCGATCGCCACCCAGGAGTATTCGC...TGTACCTTTTGTGACCATCTCAAGGTGCATGCCTAACCTTCTGATAAGCCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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3UTR CAA 72 bp | TTACGTCTGGGTAAATGCATTGCTGTACAAGATCTCTaGACATGCAGCTCATGCTCTAGGGCTTGGGAATGG | + |
Preference number: 4 (lower is better) Translates to: LRLGKCIAVQDL*TCSSCSRAWEW Trigger: CCATTCCCAAGCCCTAGAGCATGAGCTGCATGTCAAGAGATCTTGTACAGCAATGCATTTACCCAGACGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CAA 72 bp | GAGAGTCTCAGAGCATTGCCTGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTTTCATATCCTTTCCTG | + |
Preference number: 4 (lower is better) Translates to: ESLRALPAKPAM*FKLRDFSYPFL Trigger: CAGGAAAGGATATGAAAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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CDS-3UTR TCA 90 bp | CCCAGCGATTTCACATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCTTTCATATCCTTTCCTaGTTCCTCCATCAGAAGCGC | + |
Preference number: 4 (lower is better) Translates to: PSDFTFAGWFEASTCILSFHILS*FLHQKR Trigger: GCGCTTCTGATGGAGGAATCAGGAAAGGATATGAAA...GCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCGAAGCCGGTTTTCTTTaGCCAGACATGTGTCACTCT | + |
Preference number: 4 (lower is better) Translates to: HSIISFAYKKTWVGGREFEAGFL*PDMCHS Trigger: AGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTC...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CAA 72 bp | TTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCTaGCGTGTAACCAGTAATGACAACCTCTTTGCAGTT | + |
Preference number: 4 (lower is better) Translates to: FPKSLSKRSGLG*RVTSNDNLFAV Trigger: AACTGCAAAGAGGTTGTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR GCA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACCGTCGGTCTCATCGATaGCCCAGAAAGCCAGCTCTT | + |
Preference number: 4 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHRRSHR*PRKPAL Trigger: AAGAGCTGGCTTTCTGGGGCATCGATGAGACCGACG...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR GCA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCTTTTTGAACTGCGTGTaGTCACTAGCTGAAGGGTCA | + |
Preference number: 4 (lower is better) Translates to: HSIISFAYKKTWVGGREFFLNCV*SLAEGS Trigger: TGACCCTTCAGCTAGTGAGCACACGCAGTTCAAAAA...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | TGGAGACAGCATATAGAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAATTTCTTGGAAGTTTCTaGTTCGCCATTGCCAAGGAG | + |
Preference number: 4 (lower is better) Translates to: WRQHIELRQGAKTDRWRQFLGSF*FAIAKE Trigger: CTCCTTGGCAATGGCGAAGCAGAAACTTCCAAGAAA...TTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTCTATATGCTGTCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR GCA 90 bp | AGCTACACTGTTACTAATGGAGCCTGGAGAAACTCTACAGTTGATTGTTTCCATTCTCAGAGCATTGCCTaGCAAGCCCGCTATGTTGTT | + |
Preference number: 4 (lower is better) Translates to: SYTVTNGAWRNSTVDCFHSQSIA*QARYVV Trigger: AACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGA...ATGGAAACAATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAACAGTGTAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | ATGGCATTTTCCTTCCTTCGCATACCCAAAATATCAGATACACTATTGCTACAGAGAGTCTCAGAGCATTaGCTGCCAAGCCCGCTATGT | + |
Preference number: 4 (lower is better) Translates to: MAFSFLRIPKISDTLLLQRVSEH*LPSPLC Trigger: ACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCT...CTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGAAAATGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | GATATGGCTTATGCATTAGTGCACTGGCCAATATCTGACACTATTGGTCACTGTTTTTTGAACTGCGTGTaGTCACTAGCTGAAGGGTCA | + |
Preference number: 4 (lower is better) Translates to: DMAYALVHWPISDTIGHCFLNCV*SLAEGS Trigger: TGACCCTTCAGCTAGTGAGCACACGCAGTTCAAAAA...ACAGTGACCAATAGTGTCAGATATTGGCCAGTGCACTAATGCATAAGCCATATC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | GATCCCAGACATCTTCAGAATGGTTTGGAGTCACAAGAAATGAAGGTCCAGAAAGGGATGTTTTTGAACTaGGTGTGCTCACTAGCTGAA | + |
Preference number: 4 (lower is better) Translates to: DPRHLQNGLESQEMKVQKGMFLN*VCSLAE Trigger: TTCAGCTAGTGAGCACACGCAGTTCAAAAACATCCC...TTTCTGGACCTTCATTTCTTGTGACTCCAAACCATTCTGAAGATGTCTGGGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR GCA 90 bp | AGCTACACTGTTACTAATGGAGCCTGGAGAAACTCTACAGTTGATTGTTTCCATGAAGCCGGTTTTCTTTaGCCAGACATGTGTCACTCT | + |
Preference number: 4 (lower is better) Translates to: SYTVTNGAWRNSTVDCFHEAGFL*PDMCHS Trigger: AGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTC...ATGGAAACAATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAACAGTGTAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR CCA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACGTAGGGGGACGTTACTaGAGAGAGTCTCAGAGCATT | + |
Preference number: 4 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHVGGRY*RESQSI Trigger: AATGCTCTGAGACTCTCTCCAGTAACGTCCCCCTAC...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR CCA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTAGTAGGGGGACGTTACTaGAGAGAGTCTCAGAGCATT | + |
Preference number: 4 (lower is better) Translates to: LDFYVDTRSLQHSRHADLVGGRY*RESQSI Trigger: AATGCTCTGAGACTCTCTCCAGTAACGTCCCCCTAC...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR CCA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTAAGACATGTGTCACTCTaGGTACTGTTGCAAGCCATG | + |
Preference number: 4 (lower is better) Translates to: LDFYVDTRSLQHSRHADLRHVSL*VLLQAM Trigger: CATGGCTTGCAACAGTACCCAGAGTGACACATGTCT...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR GCA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACTTTCTTGGAAGTTTCTaGTTCGCCATTGCCAAGGAG | + |
Preference number: 4 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHFLGSF*FAIAKE Trigger: CTCCTTGGCAATGGCGAAGCAGAAACTTCCAAGAAA...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR CCA 90 bp | TTTAAAGCCAGGATAAGATGTTTTAGCTACTTGCGTAGCATTTCTGACTTCAAAAGACATGTGTCACTCTaGGTACTGTTGCAAGCCATG | + |
Preference number: 4 (lower is better) Translates to: FKARIRCFSYLRSISDFKRHVSL*VLLQAM Trigger: CATGGCTTGCAACAGTACCCAGAGTGACACATGTCT...TTTGAAGTCAGAAATGCTACGCAAGTAGCTAAAACATCTTATCCTGGCTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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3UTR CAA 72 bp | TCCTTCCTTCGCATACCCAAAATATCAGATACACTATaGCTACAGCATTTGGTAGGGATGTGTAAACAGACT | + |
Preference number: 4 (lower is better) Translates to: SFLRIPKISDTL*LQHLVGMCKQT Trigger: AGTCTGTTTACACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTATGCGAAGGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR GCA 90 bp | ATTAAACACAGCCTGAAAATTCTGGTTAGTCCTTTGATGCAAATCTTAAGGCTAACAAAAATTCGTTGGTaGTCGCCCGAAGAGTATGTC | + |
Preference number: 4 (lower is better) Translates to: IKHSLKILVSPLMQILRLTKIRW*SPEEYV Trigger: GACATACTCTTCGGGCGAGCACCAACGAATTTTTGT...TAGCCTTAAGATTTGCATCAAAGGACTAACCAGAATTTTCAGGCTGTGTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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3UTR CAA 72 bp | ATACCCAAAATATCAGATACACTATTGCTACAGCATTaGGTAGGGATGTGTAAACAGACTATCTTCCCTCCA | + |
Preference number: 4 (lower is better) Translates to: IPKISDTLLLQH*VGMCKQTIFPP Trigger: TGGAGGGAAGATAGTCTGTTTACACATCCCTACCAAATGCTGTAGCAATAGTGTATCTGATATTTTGGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS GCA 90 bp | CAGGGTGGTCGCTGCCGCCGTTGCCGCCGTTGCCACCGTGCGAACTaGAGTTGCCTGCGCCGCCCTCGAAGCAGCCGCTGGGGACAGGGG | + |
Preference number: 5 (lower is better) Translates to: QGGRCRRCRRCHRAN*SCLRRPRSSRWGQG Trigger: CCCCTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCGACCACCCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 90 bp | GCTGCCGCCGTTGCCGCCGTTGCCACCGTGCGAACTGCAGTTGCCTaGGCCGCCCTCGAAGCAGCCGCTGGGGACAGGGGACAAGGGAGG | + |
Preference number: 5 (lower is better) Translates to: AAAVAAVATVRTAVA*AALEAAAGDRGQGR Trigger: CCTCCCTTGTCCCCTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 90 bp | GGTCGCTGCCGCCGTTGCCGCCGTTGCCACCGTGCGAACTGCAGTTaGCTGCGCCGCCCTCGAAGCAGCCGCTGGGGACAGGGGACAAGG | + |
Preference number: 5 (lower is better) Translates to: GRCRRCRRCHRANCS*LRRPRSSRWGQGTR Trigger: CCTTGTCCCCTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CCA 90 bp | CACCGTGCGAACTGCAGTTGCCTGCGCCGCCCTCGAAGCAGCCGCTaGGGACAGGGGACAAGGGAGGCGGTCGTGGCGGCGGAGACAGCG | + |
Preference number: 5 (lower is better) Translates to: HRANCSCLRRPRSSR*GQGTREAVVAAETA Trigger: CGCTGTCTCCGCCGCCACGACCGCCTCCCTTGTCCCCTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 90 bp | CGAAGAAGAATTCGCGGCCTCCCCCAGGGTGGTCGCTGCCGCCGTTaGCGCCGTTGCCACCGTGCGAACTGCAGTTGCCTGCGCCGCCCT | + |
Preference number: 5 (lower is better) Translates to: RRRIRGLPQGGRCRR*RRCHRANCSCLRRP Trigger: AGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCGACCACCCTGGGGGAGGCCGCGAATTCTTCTTCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 90 bp | GGTGGCGATCGAAGAAGAATTCGCGGCCTCCCCCAGGGTGGTCGCTaGCGCCGTTGCCGCCGTTGCCACCGTGCGAACTGCAGTTGCCTG | + |
Preference number: 5 (lower is better) Translates to: GGDRRRIRGLPQGGR*RRCRRCHRANCSCL Trigger: CAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCGACCACCCTGGGGGAGGCCGCGAATTCTTCTTCGATCGCCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CCA 90 bp | ACTCCTGGGTGGCGATCGAAGAAGAATTCGCGGCCTCCCCCAGGGTaGTCGCTGCCGCCGTTGCCGCCGTTGCCACCGTGCGAACTGCAG | + |
Preference number: 5 (lower is better) Translates to: TPGWRSKKNSRPPPG*SLPPLPPLPPCELQ Trigger: CTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCGACCACCCTGGGGGAGGCCGCGAATTCTTCTTCGATCGCCACCCAGGAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS TCA 90 bp | ATCTCTTGGCCGCTAGGTCCTCATCATCACCAGGGTCGCCCCCGATaGGGTCGGGTGTCTCAAAGATGTCCAGGGCCTCCTCCGCGTCCC | + |
Preference number: 5 (lower is better) Translates to: ISWPLGPHHHQGRPR*GRVSQRCPGPPPRP Trigger: GGGACGCGGAGGAGGCCCTGGACATCTTTGAGACACCCGACCTCATCGGGGGCGACCCTGGTGATGATGAGGACCTAGCGGCCAAGAGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS TCA 90 bp | CTCAAAAAGAGCCCACATGCGAGGCTGCAGCTTCCTCCAGCGGCCTaGCTTGCCATCGGGTCCTCCCAGCCCCGCAGCATCCTCAATGCC | + |
Preference number: 5 (lower is better) Translates to: LKKSPHARLQLPPAA*LAIGSSQPRSILNA Trigger: GGCATTGAGGATGCTGCGGGGCTGGGAGGACCCGATGGCAAGTCAGGCCGCTGGAGGAAGCTGCAGCCTCGCATGTGGGCTCTTTTTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 90 bp | GGCCTGACTTGCCATCGGGTCCTCCCAGCCCCGCAGCATCCTCAATaGCCAATCTCTTGGCCGCTAGGTCCTCATCATCACCAGGGTCGC | + |
Preference number: 5 (lower is better) Translates to: GLTCHRVLPAPQHPQ*PISWPLGPHHHQGR Trigger: GCGACCCTGGTGATGATGAGGACCTAGCGGCCAAGAGATTGGGCATTGAGGATGCTGCGGGGCTGGGAGGACCCGATGGCAAGTCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CCA 90 bp | ACTCCTTCCACGTACGTCAGGGCGGGATCCGTTTCGATTTCGTACTaGAGGACCGGGCTGGTGCCATTGATGACGGGCTCCGTCTTGTTT | + |
Preference number: 5 (lower is better) Translates to: TPSTYVRAGSVSISY*RTGLVPLMTGSVLF Trigger: AAACAAGACGGAGCCCGTCATCAATGGCACCAGCCCGGTCCTCCAGTACGAAATCGAAACGGATCCCGCCCTGACGTACGTGGAAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS-3UTR CAA 90 bp | GATATGGCTTATGCATTAGTGCACTGGCCAATATCTGACACTATTGGTCACTGTCGGAGGGGGCAGCGGTaGCAGCTTGTCCCCGGCCGC | + |
Preference number: 5 (lower is better) Translates to: DMAYALVHWPISDTIGHCRRGQR*QLVPGR Trigger: GCGGCCGGGGACAAGCTGCAACCGCTGCCCCCTCCG...ACAGTGACCAATAGTGTCAGATATTGGCCAGTGCACTAATGCATAAGCCATATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR CAA 90 bp | TTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACACACGGGACGAAGCACCAAGCCGAGCACATCTTaGGCCGCTTTGGAGGACAGC | + |
Preference number: 5 (lower is better) Translates to: LRQGAKTDRWRQHTGRSTKPSTS*AALEDS Trigger: GCTGTCCTCCAAAGCGGCCAAAGATGTGCTCGGCTT...GGTGCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS TCA 90 bp | CCTTTGAGGTGCAAGCATCCGTTTTCCCTCAGTAGCTGCTTCTCGTaGACAAGGTCGAGATGCAGAGTGCTGTGTGGCAGAGGTGAAACT | + |
Preference number: 5 (lower is better) Translates to: PLRCKHPFSLSSCFS*TRSRCRVLCGRGET Trigger: AGTTTCACCTCTGCCACACAGCACTCTGCATCTCGACCTTGTTCACGAGAAGCAGCTACTGAGGGAAAACGGATGCTTGCACCTCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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CDS-3UTR CAA 90 bp | AGCTACACTGTTACTAATGGAGCCTGGAGAAACTCTACAGTTGATTGTTTCCATCCGTGCGAACTGCAGTaGCCTGCGCCGCCCTCGAAG | + |
Preference number: 5 (lower is better) Translates to: SYTVTNGAWRNSTVDCFHPCELQ*PAPPSK Trigger: CTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGG...ATGGAAACAATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAACAGTGTAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR CAA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTATGGTCGCTGCCGCCGTaGCCGCCGTTGCCACCGTGC | + |
Preference number: 5 (lower is better) Translates to: LDFYVDTRSLQHSRHADLWSLPP*PPLPPC Trigger: GCACGGTGGCAACGGCGGCAACGGCGGCAGCGACCA...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR CAA 90 bp | CCCAGCGATTTCACATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCCTGGTACCCCCGACATaGAGGATCACCCTCTCGTTG | + |
Preference number: 5 (lower is better) Translates to: PSDFTFAGWFEASTCILSLVPPT*RITLSL Trigger: CAACGAGAGGGTGATCCTCAATGTCGGGGGTACCAG...GCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR CAA 90 bp | GAGTTAAGACAGGGAGCTAAGACAGACAGATGGAGACAACACACGGGACGAAGCAAATGGCGGGTGAGCTaGAAGATTCTCAGGATCCTC | + |
Preference number: 5 (lower is better) Translates to: ELRQGAKTDRWRQHTGRSKWRVS*KILRIL Trigger: GAGGATCCTGAGAATCTTCAAGCTCACCCGCCATTT...GCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTCTTAGCTCCCTGTCTTAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR CAA 90 bp | GACAGACAGATGGAGACAACACACGGGACGAAGCACCTGATTAAACACAGCCTGAGAAGCCGGTTTTCTTaGCCCAGACATGTGTCACTC | + |
Preference number: 5 (lower is better) Translates to: DRQMETTHGTKHLIKHSLRSRFS*PRHVSL Trigger: GAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCT...CAGGCTGTGTTTAATCAGGTGCTTCGTCCCGTGTGTTGTCTCCATCTGTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR CAA 90 bp | CCCAGCGATTTCACATTTGCAGGATGGTTTGAAGCAAGTACATGTATCCTGAGCGAGAGTCTCAGAGCATaGCCTGCCAAGCCCGCTATG | + |
Preference number: 5 (lower is better) Translates to: PSDFTFAGWFEASTCILSESLRA*PAKPAM Trigger: CATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCTC...GCTCAGGATACATGTACTTGCTTCAAACCATCCTGCAAATGTGAAATCGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS GCA 90 bp | TTTCCCTCAGTAGCTGCTTCTCGTGAACAAGGTCGAGATGCAGAGTaGTGTGTGGCAGAGGTGAAACTGATCTGTTATGTTCCAGAAGCC | + |
Preference number: 5 (lower is better) Translates to: FPSVAASREQGRDAE*CVAEVKLICYVPEA Trigger: GGCTTCTGGAACATAACAGATCAGTTTCACCTCTGCCACACAGCACTCTGCATCTCGACCTTGTTCACGAGAAGCAGCTACTGAGGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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CDS-3UTR CAA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCGAGAGTCTCAGAGCATaGCCTGCCAAGCCCGCTATG | + |
Preference number: 5 (lower is better) Translates to: HSIISFAYKKTWVGGREFESLRA*PAKPAM Trigger: CATAGCGGGCTTGGCAGGCAATGCTCTGAGACTCTC...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS GCA 90 bp | GCAGAGGTGAAACTGATCTGTTATGTTCCAGAAGCCGGTTTTCTTTaGCCAGACATGTGTCACTCTGGGTACTGTTGCAAGCCATGTTCA | + |
Preference number: 5 (lower is better) Translates to: AEVKLICYVPEAGFL*PDMCHSGYCCKPCS Trigger: TGAACATGGCTTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCTGGAACATAACAGATCAGTTTCACCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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CDS TCA 90 bp | CTTCCTGTAGGACACCCAAAATTGAGTAAGTGCGCACAATTCCAATaGGCTTCTGGTCTTGTGTCTCCTTTAGTCTGTGCAGTACTCTCC | + |
Preference number: 5 (lower is better) Translates to: LPVGHPKLSKCAQFQ*ASGLVSPLVCAVLS Trigger: GGAGAGTACTGCACAGACTAAAGGAGACACAAGACCAGAAGCTCATTGGAATTGTGCGCACTTACTCAATTTTGGGTGTCCTACAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219301.2 |
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CDS GCA 90 bp | GTTGCAAGCCATGTTCAATTCTGTCTTGCAAAATGTAGGCGAGCTTaGCAGAGGGGCAGGAGGAATATGCTTCTTTCTCTTTCTTGGAAG | + |
Preference number: 5 (lower is better) Translates to: VASHVQFCLAKCRRA*QRGRRNMLLSLSWK Trigger: CTTCCAAGAAAGAGAAAGAAGCATATTCCTCCTGCCCCTCTGGCAAGCTCGCCTACATTTTGCAAGACAGAATTGAACATGGCTTGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 ENSMUST00000219301.2 ENSMUST00000219607.2 |
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CDS GCA 90 bp | CACCTGATAACACTGATCTGTTATGTTCCAGAAGCCGGTTTTCTTTaGCCAGACATGTGTCACTCTGGGTACTGTTGCAAGCCATGTTCA | + |
Preference number: 5 (lower is better) Translates to: HLITLICYVPEAGFL*PDMCHSGYCCKPCS Trigger: TGAACATGGCTTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCTGGAACATAACAGATCAGTGTTATCAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000219301.2 ENSMUST00000219607.2 |
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CDS-3UTR CAA 90 bp | CACAGCATCATTAGTTTTGCATACAAGAAGACATGGGTAGGAGGTAGGGAGTTCAGAAGCCGGTTTTCTTaGCCCAGACATGTGTCACTC | + |
Preference number: 5 (lower is better) Translates to: HSIISFAYKKTWVGGREFRSRFS*PRHVSL Trigger: GAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCT...GAACTCCCTACCTCCTACCCATGTCTTCTTGTATGCAAAACTAATGATGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS GCA 90 bp | AGCACCATCTCAGTTCCAGCCACAGTCCCTTTTATAAGCTTTAAATaGCTCATAAGATGCGGGACCTCTTCTTTCCTGATTCCTCCATCA | + |
Preference number: 5 (lower is better) Translates to: STISVPATVPFISFK*LIRCGTSSFLIPPS Trigger: TGATGGAGGAATCAGGAAAGAAGAGGTCCCGCATCTTATGAGGCATTTAAAGCTTATAAAAGGGACTGTGGCTGGAACTGAGATGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219607.2 |
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CDS-3UTR CAA 90 bp | AGCTACACTGTTACTAATGGAGCCTGGAGAAACTCTACAGTTGATTGTTTCCATTCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGT | + |
Preference number: 5 (lower is better) Translates to: SYTVTNGAWRNSTVDCFHSPLLF*SLVLER Trigger: ACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGA...ATGGAAACAATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAACAGTGTAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR CAA 90 bp | GGAATGGAGACTAACACACGTCTCTATCCAATAACACAAGTGACAATTGCCTTTGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTT | + |
Preference number: 5 (lower is better) Translates to: GMETNTRLYPITQVTIAFAKPAM*FKLRDF Trigger: AAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGC...AAAGGCAATTGTCACTTGTGTTATTGGATAGAGACGTGTGTTAGTCTCCATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR CAA 90 bp | AGCTACACTGTTACTAATGGAGCCTGGAGAAACTCTACAGTTGATTGTTTCCATGCCAAGCCCGCTATGTaGTTTAAGCTTCGGGATTTT | + |
Preference number: 5 (lower is better) Translates to: SYTVTNGAWRNSTVDCFHAKPAM*FKLRDF Trigger: AAAATCCCGAAGCTTAAACAACATAGCGGGCTTGGC...ATGGAAACAATCAACTGTAGAGTTTCTCCAGGCTCCATTAGTAACAGTGTAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 |
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CDS-3UTR CAA 90 bp | TCTTTCATGTTTTGTGCCTTCCCCAAGTCATTAAGTAAGAGATCTGGCCTCGGCATGACGGGCTCCGTCTaGTTTTTAACAATATTGAAA | + |
Preference number: 5 (lower is better) Translates to: SFMFCAFPKSLSKRSGLGMTGSV*FLTILK Trigger: TTTCAATATTGTTAAAAACAAGACGGAGCCCGTCAT...GCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092175.4 |
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CDS-3UTR CAA 90 bp | ATAAGAGAAATGAAAACAGACCTATACTACATCGGATTCACTGCCCTCTGTAATAGAAGCCGGTTTTCTTaGCCCAGACATGTGTCACTC | + |
Preference number: 5 (lower is better) Translates to: IREMKTDLYYIGFTALCNRSRFS*PRHVSL Trigger: GAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCT...ATTACAGAGGGCAGTGAATCCGATGTAGTATAGGTCTGTTTTCATTTCTCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR CAA 90 bp | TTAGATTTCTATGTAGACACTAGAAGTTTACAACACAGTCGACACGCTGATCTATCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGT | + |
Preference number: 5 (lower is better) Translates to: LDFYVDTRSLQHSRHADLSPLLF*SLVLER Trigger: ACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGA...TAGATCAGCGTGTCGACTGTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS-3UTR CAA 90 bp | CACGTGACCAAGAAATGGTTAGATTTCTATGTAGACACTAGAAGTTTACAACACTCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGT | + |
Preference number: 5 (lower is better) Translates to: HVTKKWLDFYVDTRSLQHSPLLF*SLVLER Trigger: ACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGA...GTGTTGTAAACTTCTAGTGTCTACATAGAAATCTAACCATTTCTTGGTCACGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 |
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CDS GCA 72 bp | GGTCGTGGCGGCGGAGACAGCGGAGGGGGCAGCGGTTaGAGCTTGTCCCCGGCCGCAGTCAGGCAGTCGCCC | + |
Preference number: 6 (lower is better) Translates to: GRGGGDSGGGSG*SLSPAAVRQSP Trigger: GGGCGACTGCCTGACTGCGGCCGGGGACAAGCTGCAACCGCTGCCCCCTCCGCTGTCTCCGCCGCCACGACC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 72 bp | CGGTCGTGGCGGCGGAGACAGCGGAGGGGGCAGCGGTaGCAGCTTGTCCCCGGCCGCAGTCAGGCAGTCGCC | + |
Preference number: 6 (lower is better) Translates to: RSWRRRQRRGQR*QLVPGRSQAVA Trigger: GGCGACTGCCTGACTGCGGCCGGGGACAAGCTGCAACCGCTGCCCCCTCCGCTGTCTCCGCCGCCACGACCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 72 bp | CGCTGCCGCCGTTGCCGCCGTTGCCACCGTGCGAACTaGAGTTGCCTGCGCCGCCCTCGAAGCAGCCGCTGG | + |
Preference number: 6 (lower is better) Translates to: RCRRCRRCHRAN*SCLRRPRSSRW Trigger: CCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 90 bp | CAAGGGAGGCGGTCGTGGCGGCGGAGACAGCGGAGGGGGCAGCGGTaGCAGCTTGTCCCCGGCCGCAGTCAGGCAGTCGCCCTGAGGTTC | + |
Preference number: 6 (lower is better) Translates to: QGRRSWRRRQRRGQR*QLVPGRSQAVALRF Trigger: GAACCTCAGGGCGACTGCCTGACTGCGGCCGGGGACAAGCTGCAACCGCTGCCCCCTCCGCTGTCTCCGCCGCCACGACCGCCTCCCTTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 72 bp | CGCCGTTGCCGCCGTTGCCACCGTGCGAACTGCAGTTaGCTGCGCCGCCCTCGAAGCAGCCGCTGGGGACAG | + |
Preference number: 6 (lower is better) Translates to: RRCRRCHRANCS*LRRPRSSRWGQ Trigger: CTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CCA 72 bp | AACTGCAGTTGCCTGCGCCGCCCTCGAAGCAGCCGCTaGGGACAGGGGACAAGGGAGGCGGTCGTGGCGGCG | + |
Preference number: 6 (lower is better) Translates to: NCSCLRRPRSSR*GQGTREAVVAA Trigger: CGCCGCCACGACCGCCTCCCTTGTCCCCTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 72 bp | CCGCCGTTGCCGCCGTTGCCACCGTGCGAACTGCAGTaGCCTGCGCCGCCCTCGAAGCAGCCGCTGGGGACA | + |
Preference number: 6 (lower is better) Translates to: PPLPPLPPCELQ*PAPPSKQPLGT Trigger: TGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 90 bp | TGGTCGCTGCCGCCGTTGCCGCCGTTGCCACCGTGCGAACTGCAGTaGCCTGCGCCGCCCTCGAAGCAGCCGCTGGGGACAGGGGACAAG | + |
Preference number: 6 (lower is better) Translates to: WSLPPLPPLPPCELQ*PAPPSKQPLGTGDK Trigger: CTTGTCCCCTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCGACCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 72 bp | GTTGCCGCCGTTGCCACCGTGCGAACTGCAGTTGCCTaGGCCGCCCTCGAAGCAGCCGCTGGGGACAGGGGA | + |
Preference number: 6 (lower is better) Translates to: VAAVATVRTAVA*AALEAAAGDRG Trigger: TCCCCTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 90 bp | TCGAAGAAGAATTCGCGGCCTCCCCCAGGGTGGTCGCTGCCGCCGTaGCCGCCGTTGCCACCGTGCGAACTGCAGTTGCCTGCGCCGCCC | + |
Preference number: 6 (lower is better) Translates to: SKKNSRPPPGWSLPP*PPLPPCELQLPAPP Trigger: GGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCGACCACCCTGGGGGAGGCCGCGAATTCTTCTTCGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 72 bp | AATTCGCGGCCTCCCCCAGGGTGGTCGCTGCCGCCGTaGCCGCCGTTGCCACCGTGCGAACTGCAGTTGCCT | + |
Preference number: 6 (lower is better) Translates to: NSRPPPGWSLPP*PPLPPCELQLP Trigger: AGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCAACGGCGGCAGCGACCACCCTGGGGGAGGCCGCGAATT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS TCA 72 bp | AGCCCACATGCGAGGCTGCAGCTTCCTCCAGCGGCCTaGCTTGCCATCGGGTCCTCCCAGCCCCGCAGCATC | + |
Preference number: 6 (lower is better) Translates to: SPHARLQLPPAA*LAIGSSQPRSI Trigger: GATGCTGCGGGGCTGGGAGGACCCGATGGCAAGTCAGGCCGCTGGAGGAAGCTGCAGCCTCGCATGTGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS TCA 72 bp | TGCAGCTTGTCCCCGGCCGCAGTCAGGCAGTCGCCCTaGGGTTCAGAGGAGGCAAGAAGGGCCAGGCGAGTT | + |
Preference number: 6 (lower is better) Translates to: CSLSPAAVRQSP*GSEEARRARRV Trigger: AACTCGCCTGGCCCTTCTTGCCTCCTCTGAACCTCAGGGCGACTGCCTGACTGCGGCCGGGGACAAGCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 90 bp | CCATCGGGTCCTCCCAGCCCCGCAGCATCCTCAATGCCCAATCTCTaGGCCGCTAGGTCCTCATCATCACCAGGGTCGCCCCCGATGAGG | + |
Preference number: 6 (lower is better) Translates to: PSGPPSPAASSMPNL*AARSSSSPGSPPMR Trigger: CCTCATCGGGGGCGACCCTGGTGATGATGAGGACCTAGCGGCCAAGAGATTGGGCATTGAGGATGCTGCGGGGCTGGGAGGACCCGATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CCA 72 bp | CTCCCAGCCCCGCAGCATCCTCAATGCCCAATCTCTTaGCCGCTAGGTCCTCATCATCACCAGGGTCGCCCC | + |
Preference number: 6 (lower is better) Translates to: LPAPQHPQCPIS*PLGPHHHQGRP Trigger: GGGGCGACCCTGGTGATGATGAGGACCTAGCGGCCAAGAGATTGGGCATTGAGGATGCTGCGGGGCTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 72 bp | CCTCCCAGCCCCGCAGCATCCTCAATGCCCAATCTCTaGGCCGCTAGGTCCTCATCATCACCAGGGTCGCCC | + |
Preference number: 6 (lower is better) Translates to: PPSPAASSMPNL*AARSSSSPGSP Trigger: GGGCGACCCTGGTGATGATGAGGACCTAGCGGCCAAGAGATTGGGCATTGAGGATGCTGCGGGGCTGGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS TCA 72 bp | CCGCTAGGTCCTCATCATCACCAGGGTCGCCCCCGATaGGGTCGGGTGTCTCAAAGATGTCCAGGGCCTCCT | + |
Preference number: 6 (lower is better) Translates to: PLGPHHHQGRPR*GRVSQRCPGPP Trigger: AGGAGGCCCTGGACATCTTTGAGACACCCGACCTCATCGGGGGCGACCCTGGTGATGATGAGGACCTAGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS GCA 72 bp | TGCCATCGGGTCCTCCCAGCCCCGCAGCATCCTCAATaGCCAATCTCTTGGCCGCTAGGTCCTCATCATCAC | + |
Preference number: 6 (lower is better) Translates to: CHRVLPAPQHPQ*PISWPLGPHHH Trigger: GTGATGATGAGGACCTAGCGGCCAAGAGATTGGGCATTGAGGATGCTGCGGGGCTGGGAGGACCCGATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CCA 72 bp | ACGTACGTCAGGGCGGGATCCGTTTCGATTTCGTACTaGAGGACCGGGCTGGTGCCATTGATGACGGGCTCC | + |
Preference number: 6 (lower is better) Translates to: TYVRAGSVSISY*RTGLVPLMTGS Trigger: GGAGCCCGTCATCAATGGCACCAGCCCGGTCCTCCAGTACGAAATCGAAACGGATCCCGCCCTGACGTACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS TCA 72 bp | TGCTGCGGTAGGTTTCGTGCCTGGTACCCCCGACATTaGGGATCACCCTCTCGTTGCTCTCGATCTTGCCCA | + |
Preference number: 6 (lower is better) Translates to: CCGRFRAWYPRH*GSPSRCSRSCP Trigger: TGGGCAAGATCGAGAGCAACGAGAGGGTGATCCTCAATGTCGGGGGTACCAGGCACGAAACCTACCGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS TCA 72 bp | TGCAAGCATCCGTTTTCCCTCAGTAGCTGCTTCTCGTaGACAAGGTCGAGATGCAGAGTGCTGTGTGGCAGA | + |
Preference number: 6 (lower is better) Translates to: CKHPFSLSSCFS*TRSRCRVLCGR Trigger: TCTGCCACACAGCACTCTGCATCTCGACCTTGTTCACGAGAAGCAGCTACTGAGGGAAAACGGATGCTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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CDS CAA 90 bp | AGAGTATGTCCGAGCACCCTCAGACCTACGAAATGGCGGGTGAGCTaGAAGATTCTCAGGATCCTCACAAACCTAACCACCCTGAGAAAG | + |
Preference number: 6 (lower is better) Translates to: RVCPSTLRPTKWRVS*KILRILTNLTTLRK Trigger: CTTTCTCAGGGTGGTTAGGTTTGTGAGGATCCTGAGAATCTTCAAGCTCACCCGCCATTTCGTAGGTCTGAGGGTGCTCGGACATACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092175.4 ENSMUST00000219301.2 |
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CDS CAA 90 bp | CATGTGTCACTCTGGGTACTGTTGCAAGCCATGTTCAATTCTGTCTaGCAAAATGTAGGCGAGCTTGCCAGAGGGGCAGGAGGAATATGC | + |
Preference number: 6 (lower is better) Translates to: HVSLWVLLQAMFNSV*QNVGELARGAGGIC Trigger: GCATATTCCTCCTGCCCCTCTGGCAAGCTCGCCTACATTTTGCAAGACAGAATTGAACATGGCTTGCAACAGTACCCAGAGTGACACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 ENSMUST00000219301.2 ENSMUST00000219607.2 |
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CDS CAA 90 bp | GGCAGAGGTGAAACTGATCTGTTATGTTCCAGAAGCCGGTTTTCTTaGCCCAGACATGTGTCACTCTGGGTACTGTTGCAAGCCATGTTC | + |
Preference number: 6 (lower is better) Translates to: GRGETDLLCSRSRFS*PRHVSLWVLLQAMF Trigger: GAACATGGCTTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCTGGAACATAACAGATCAGTTTCACCTCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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CDS CAA 72 bp | GTCGTCAACAGGAAACACGTTTCCCCTCTTCTGTTTTaGTCTCTGGTACTAGAGCGTCTGATAGGGAGCCTT | + |
Preference number: 6 (lower is better) Translates to: VVNRKHVSPLLF*SLVLERLIGSL Trigger: AAGGCTCCCTATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAAACGTGTTTCCTGTTGACGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000219301.2 ENSMUST00000219607.2 |
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CDS CAA 90 bp | TCACCTGATAACACTGATCTGTTATGTTCCAGAAGCCGGTTTTCTTaGCCCAGACATGTGTCACTCTGGGTACTGTTGCAAGCCATGTTC | + |
Preference number: 6 (lower is better) Translates to: SPDNTDLLCSRSRFS*PRHVSLWVLLQAMF Trigger: GAACATGGCTTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCTGGAACATAACAGATCAGTGTTATCAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000219301.2 ENSMUST00000219607.2 |
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CDS GCA 72 bp | ACACTGATCTGTTATGTTCCAGAAGCCGGTTTTCTTTaGCCAGACATGTGTCACTCTGGGTACTGTTGCAAG | + |
Preference number: 6 (lower is better) Translates to: TLICYVPEAGFL*PDMCHSGYCCK Trigger: CTTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCTGGAACATAACAGATCAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000219301.2 ENSMUST00000219607.2 |
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CDS TCA 72 bp | GGACACCCAAAATTGAGTAAGTGCGCACAATTCCAATaGGCTTCTGGTCTTGTGTCTCCTTTAGTCTGTGCA | + |
Preference number: 6 (lower is better) Translates to: GHPKLSKCAQFQ*ASGLVSPLVCA Trigger: TGCACAGACTAAAGGAGACACAAGACCAGAAGCTCATTGGAATTGTGCGCACTTACTCAATTTTGGGTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219301.2 |
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CDS GCA 72 bp | CATGTTCAATTCTGTCTTGCAAAATGTAGGCGAGCTTaGCAGAGGGGCAGGAGGAATATGCTTCTTTCTCTT | + |
Preference number: 6 (lower is better) Translates to: HVQFCLAKCRRA*QRGRRNMLLSL Trigger: AAGAGAAAGAAGCATATTCCTCCTGCCCCTCTGGCAAGCTCGCCTACATTTTGCAAGACAGAATTGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000218827.2 ENSMUST00000219301.2 ENSMUST00000219607.2 |
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CDS GCA 72 bp | AAACTGATCTGTTATGTTCCAGAAGCCGGTTTTCTTTaGCCAGACATGTGTCACTCTGGGTACTGTTGCAAG | + |
Preference number: 6 (lower is better) Translates to: KLICYVPEAGFL*PDMCHSGYCCK Trigger: CTTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCTGGAACATAACAGATCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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CDS CAA 72 bp | AACACTGATCTGTTATGTTCCAGAAGCCGGTTTTCTTaGCCCAGACATGTGTCACTCTGGGTACTGTTGCAA | + |
Preference number: 6 (lower is better) Translates to: NTDLLCSRSRFS*PRHVSLWVLLQ Trigger: TTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCTGGAACATAACAGATCAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092175.4 ENSMUST00000218445.2 ENSMUST00000219301.2 ENSMUST00000219607.2 |
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CDS CAA 72 bp | GAAACTGATCTGTTATGTTCCAGAAGCCGGTTTTCTTaGCCCAGACATGTGTCACTCTGGGTACTGTTGCAA | + |
Preference number: 6 (lower is better) Translates to: ETDLLCSRSRFS*PRHVSLWVLLQ Trigger: TTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCTGGAACATAACAGATCAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218827.2 |
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CDS GCA 72 bp | ACAGTCCCTTTTATAAGCTTTAAATGCCTCATAAGATaGGGGACCTCTTCTTTCCTGATTCCTCCATCAGAA | + |
Preference number: 6 (lower is better) Translates to: TVPFISFKCLIR*GTSSFLIPPSE Trigger: TTCTGATGGAGGAATCAGGAAAGAAGAGGTCCCGCATCTTATGAGGCATTTAAAGCTTATAAAAGGGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219607.2 |