Pregenerated sensors for KCNB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092083Ensembl transcript IDs: ENSMUST00000170146.3, ENSMUST00000175681.3
Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GTCAGTGGGTCCCTCCATCTCTTTGTCAGTAGGTCCCACTGCAGATaGACAGAATCTGCACTGCTCAGACCAGCATTTGGCTTTTGCCAA | + |
Preference number: 1 (lower is better) Translates to: VSGSLHLFVSRSHCR*TESALLRPAFGFCQ Trigger: TTGGCAAAAGCCAAATGCTGGTCTGAGCAGTGCAGATTCTGTCCATCTGCAGTGGGACCTACTGACAAAGAGATGGAGGGACCCACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | AGATGTAGCCAAACGAGATTTGTGTGTGTGTTTTGGGGCAGCACATaGGGTGCCCTGAAAGCATGGTGGACAGCGTTGCAAACACAGAGG | + |
Preference number: 1 (lower is better) Translates to: RCSQTRFVCVFWGST*GALKAWWTALQTQR Trigger: CCTCTGTGTTTGCAACGCTGTCCACCATGCTTTCAGGGCACCCCATGTGCTGCCCCAAAACACACACACAAATCTCGTTTGGCTACATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 90 bp | AAGAGCTGTGGCCACAGGGATGTCAGGAGCCTAGTTGTTTCTGACTaGATGCAGAGAACATGCACAGCATGTGAAGGGCAGAGCAATTGT | + |
Preference number: 1 (lower is better) Translates to: KSCGHRDVRSLVVSD*MQRTCTACEGQSNC Trigger: ACAATTGCTCTGCCCTTCACATGCTGTGCATGTTCTCTGCATGCAGTCAGAAACAACTAGGCTCCTGACATCCCTGTGGCCACAGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 90 bp | ATCTCTTTGTCAGTAGGTCCCACTGCAGATGGACAGAATCTGCACTaGTCAGACCAGCATTTGGCTTTTGCCAAAGCAGTAGGTGGTGTT | + |
Preference number: 1 (lower is better) Translates to: ISLSVGPTADGQNLH*SDQHLAFAKAVGGV Trigger: AACACCACCTACTGCTTTGGCAAAAGCCAAATGCTGGTCTGAGCAGTGCAGATTCTGTCCATCTGCAGTGGGACCTACTGACAAAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 90 bp | ACGTGGAGGCAGGTGAGTGAGACAAGGTGTAGCCATTTATGCGTGTaGTTTAGCTCCTGGCAAGAATCTGTATCGAAAGCCAACAGAGTA | + |
Preference number: 1 (lower is better) Translates to: TWRQVSETRCSHLCV*FSSWQESVSKANRV Trigger: TACTCTGTTGGCTTTCGATACAGATTCTTGCCAGGAGCTAAAGCACACGCATAAATGGCTACACCTTGTCTCACTCACCTGCCTCCACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | CTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATaGCGTGTCCACATGTTTGAGGCACATTTACATCCAGGCCTATTT | + |
Preference number: 1 (lower is better) Translates to: LLQAVAVKEVPVSQK*RVHMFEAHLHPGLF Trigger: AAATAGGCCTGGATGTAAATGTGCCTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR GCA 90 bp | AGGTCCCTCATTTCTTCCTGTCTCCCCCGTTTTTGTCTTCTACAGTaGTGGAGATTAATCAGGGTGTCATACATGCTAGGAAGGTCCTCT | + |
Preference number: 1 (lower is better) Translates to: RSLISSCLPRFCLLQ*WRLIRVSYMLGRSS Trigger: AGAGGACCTTCCTAGCATGTATGACACCCTGATTAATCTCCAGCACTGTAGAAGACAAAAACGGGGGAGACAGGAAGAAATGAGGGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 90 bp | AGGGATGTCAGGAGCCTAGTTGTTTCTGACTGCATGCAGAGAACATaGACAGCATGTGAAGGGCAGAGCAATTGTCCTTACTTCTGGTTA | + |
Preference number: 1 (lower is better) Translates to: RDVRSLVVSDCMQRT*TACEGQSNCPYFWL Trigger: TAACCAGAAGTAAGGACAATTGCTCTGCCCTTCACATGCTGTGCATGTTCTCTGCATGCAGTCAGAAACAACTAGGCTCCTGACATCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | TCCCTCATTTCTTCCTGTCTCCCCCGTTTTTGTCTTCTACAGTGCTaGAGATTAATCAGGGTGTCATACATGCTAGGAAGGTCCTCTACC | + |
Preference number: 1 (lower is better) Translates to: SLISSCLPRFCLLQC*RLIRVSYMLGRSST Trigger: GGTAGAGGACCTTCCTAGCATGTATGACACCCTGATTAATCTCCAGCACTGTAGAAGACAAAAACGGGGGAGACAGGAAGAAATGAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 90 bp | TTCATGGGATTGTACTTTACAAAGGCAAGTGGAGGACATGGCTGTTaGAACCATGGGAAGTATGCAGCCCAGCCCAGTGTTAACTACAGT | + |
Preference number: 1 (lower is better) Translates to: FMGLYFTKASGGHGC*NHGKYAAQPSVNYS Trigger: ACTGTAGTTAACACTGGGCTGGGCTGCATACTTCCCATGGTTTCAACAGCCATGTCCTCCACTTGCCTTTGTAAAGTACAATCCCATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 90 bp | AAGATGAGACGGCCACAGTGGCAGCTTCAGAATGCAGCAGACACATaGCAGTCAACATGGAAGTTGCGTATAAGCTACATAGAGATAGGT | + |
Preference number: 1 (lower is better) Translates to: KMRRPQWQLQNAADT*QSTWKLRISYIEIG Trigger: ACCTATCTCTATGTAGCTTATACGCAACTTCCATGTTGACTGTCATGTGTCTGCTGCATTCTGAAGCTGCCACTGTGGCCGTCTCATCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | GTCAAAGTGACACATTCTGTACAGTCCAGCAGAGATCTGGAGCATTaGTCAAGATGTAGCCAAACGAGATTTGTGTGTGTGTTTTGGGGC | + |
Preference number: 1 (lower is better) Translates to: VKVTHSVQSSRDLEH*SRCSQTRFVCVFWG Trigger: GCCCCAAAACACACACACAAATCTCGTTTGGCTACATCTTGACCAATGCTCCAGATCTCTGCTGGACTGTACAGAATGTGTCACTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 90 bp | TGTGCTTCTTCTTCCCTGCAGCGTTCAGAGCTTTATAGACTAGTATaGAAACCCTCTAAGACACTGAAGGGAATGATGGACCATGCACTG | + |
Preference number: 1 (lower is better) Translates to: CASSSLQRSELYRLV*KPSKTLKGMMDHAL Trigger: CAGTGCATGGTCCATCATTCCCTTCAGTGTCTTAGAGGGTTTTCATACTAGTCTATAAAGCTCTGAACGCTGCAGGGAAGAAGAAGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | AGAACATGCACAGCATGTGAAGGGCAGAGCAATTGTCCTTACTTCTaGTTACCAACCACCTTTTCTGGGCAAATAGAATCCCATCCTTTG | + |
Preference number: 1 (lower is better) Translates to: RTCTACEGQSNCPYF*LPTTFSGQIESHPL Trigger: CAAAGGATGGGATTCTATTTGCCCAGAAAAGGTGGTTGGTAACCAGAAGTAAGGACAATTGCTCTGCCCTTCACATGCTGTGCATGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 90 bp | TGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTaGGGCACATTTACATCCAGGCCTATTTACAAAGTTATGCAAAGT | + |
Preference number: 1 (lower is better) Translates to: CEGGTCVSEMACPHV*GTFTSRPIYKVMQS Trigger: ACTTTGCATAACTTTGTAAATAGGCCTGGATGTAAATGTGCCTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR GCA 90 bp | TGTCTGATTTTGTTCAGGAAGATCAAGTGGCTTTCTATAGACTTCTaGCTCATGTGTGTGCCACCTCACATCACAAATAGTGGAGTCTTC | + |
Preference number: 1 (lower is better) Translates to: CLILFRKIKWLSIDF*LMCVPPHITNSGVF Trigger: GAAGACTCCACTATTTGTGATGTGAGGTGGCACACACATGAGGCAGAAGTCTATAGAAAGCCACTTGATCTTCCTGAACAAAATCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 90 bp | AGGCCATGTATGCTATTGACAGAATTCTCAACTGGCAAACATAAGTaGCTAACTTGGTTCTTAGCTCTTACTACCCCACAGATTTGCTAC | + |
Preference number: 1 (lower is better) Translates to: RPCMLLTEFSTGKHK*LTWFLALTTPQICY Trigger: GTAGCAAATCTGTGGGGTAGTAAGAGCTAAGAACCAAGTTAGGCACTTATGTTTGCCAGTTGAGAATTCTGTCAATAGCATACATGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 90 bp | GTCATCAACTCTCTTTTCCTATTAGATCTGGTCTCATCATGGTATTaGTTCAAAGCAGTTGACTGTGTCAGAGTGAGAGCATTTCTAGTG | + |
Preference number: 1 (lower is better) Translates to: VINSLFLLDLVSSWY*FKAVDCVRVRAFLV Trigger: CACTAGAAATGCTCTCACTCTGACACAGTCAACTGCTTTGAAGCAATACCATGATGAGACCAGATCTAATAGGAAAAGAGAGTTGATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | AGTGAAATGTTTAGAGAACAATTAGGTCAATTTCAGGGATCCACTTaGTGTATGTGTGGACCTACAGATAGGTCCCTCATTTCTTCCTGT | + |
Preference number: 1 (lower is better) Translates to: SEMFREQLGQFQGST*CMCGPTDRSLISSC Trigger: ACAGGAAGAAATGAGGGACCTATCTGTAGGTCCACACATACACCAAGTGGATCCCTGAAATTGACCTAATTGTTCTCTAAACATTTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | ACACTGGTCATCAACTCTCTTTTCCTATTAGATCTGGTCTCATCATaGTATTGCTTCAAAGCAGTTGACTGTGTCAGAGTGAGAGCATTT | + |
Preference number: 1 (lower is better) Translates to: TLVINSLFLLDLVSS*YCFKAVDCVRVRAF Trigger: AAATGCTCTCACTCTGACACAGTCAACTGCTTTGAAGCAATACCATGATGAGACCAGATCTAATAGGAAAAGAGAGTTGATGACCAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | CGTGGCCAGCATGGGAATAAGAATGTTAATAAGAGAATATGGGAATaGACACTGGTCATCAACTCTCTTTTCCTATTAGATCTGGTCTCA | + |
Preference number: 1 (lower is better) Translates to: RGQHGNKNVNKRIWE*TLVINSLFLLDLVS Trigger: TGAGACCAGATCTAATAGGAAAAGAGAGTTGATGACCAGTGTCCATTCCCATATTCTCTTATTAACATTCTTATTCCCATGCTGGCCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 90 bp | ATGCTTTCTATTTACATGGTTTTAGCCATTGAACACCCTTTCCAGTaGTACATTAGGATGCCATATTTAGAGCCAGATGGTGTGTGTGAG | + |
Preference number: 1 (lower is better) Translates to: MLSIYMVLAIEHPFQ*YIRMPYLEPDGVCE Trigger: CTCACACACACCATCTGGCTCTAAATATGGCATCCTAATGTATCACTGGAAAGGGTGTTCAATGGCTAAAACCATGTAAATAGAAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | AATGCTCTTATCTTTGAAATTAAAAACGTCTTGGGCAATTTGCACTaGTTAAGAGGCCCAGCAGAAACAGCTTTGCCATTAGAAGGATCA | + |
Preference number: 1 (lower is better) Translates to: NALIFEIKNVLGNLH*LRGPAETALPLEGS Trigger: TGATCCTTCTAATGGCAAAGCTGTTTCTGCTGGGCCTCTTAACCAGTGCAAATTGCCCAAGACGTTTTTAATTTCAAAGATAAGAGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 90 bp | GCTGGACTAAGTGACTGTATGTGTTACCTTCAAGCAAACTATAGGTaGTCAGGAAAGCTTTGTTATATGTCAACAGAACAATCTAGAACT | + |
Preference number: 1 (lower is better) Translates to: AGLSDCMCYLQANYR*SGKLCYMSTEQSRT Trigger: AGTTCTAGATTGTTCTGTTGACATATAACAAAGCTTTCCTGAGCACCTATAGTTTGCTTGAAGGTAACACATACAGTCACTTAGTCCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 90 bp | AATTTCCGTGGCCAGCATGGGAATAAGAATGTTAATAAGAGAATATaGGAATGGACACTGGTCATCAACTCTCTTTTCCTATTAGATCTG | + |
Preference number: 1 (lower is better) Translates to: NFRGQHGNKNVNKRI*EWTLVINSLFLLDL Trigger: CAGATCTAATAGGAAAAGAGAGTTGATGACCAGTGTCCATTCCCATATTCTCTTATTAACATTCTTATTCCCATGCTGGCCACGGAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 90 bp | TTTCCTATTAGATCTGGTCTCATCATGGTATTGCTTCAAAGCAGTTaGCTGTGTCAGAGTGAGAGCATTTCTAGTGAAATGTTTAGAGAA | + |
Preference number: 1 (lower is better) Translates to: FPIRSGLIMVLLQSS*LCQSESISSEMFRE Trigger: TTCTCTAAACATTTCACTAGAAATGCTCTCACTCTGACACAGTCAACTGCTTTGAAGCAATACCATGATGAGACCAGATCTAATAGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGCAAAGTTTGCAAGCTaGAAGCACCTTTCTCCCCGT | + |
Preference number: 2 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEAKFAS*KHLSPR Trigger: ACGGGGAGAAAGGTGCTTTCAGCTTGCAAACTTTGC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR-3UTR GCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGCTTCCCATAAATGGTaGAGCCAGCCAAGAGTGTCA | + |
Preference number: 2 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVASHKW*SQPRVS Trigger: TGACACTCTTGGCTGGCTGCACCATTTATGGGAAGC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGTTGCTTCAAAGCAGTTaGCTGTGTCAGAGTGAGAGC | + |
Preference number: 2 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVLLQSS*LCQSES Trigger: GCTCTCACTCTGACACAGTCAACTGCTTTGAAGCAA...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGCCAGCATTTGGCTTTTaGCAAAGCAGTAGGTGGTGT | + |
Preference number: 2 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVPAFGF*QSSRWC Trigger: ACACCACCTACTGCTTTGGCAAAAGCCAAATGCTGG...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 90 bp | ATGTGTCCCATCATCATCATGTTGTCAGTGGGTCCCTCCATCTCTTaGTCAGTAGGTCCCACTGCAGATGGACAGAATCTGCACTGCTCA | + |
Preference number: 2 (lower is better) Translates to: MCPIIIMLSVGPSIS*SVGPTADGQNLHCS Trigger: TGAGCAGTGCAGATTCTGTCCATCTGCAGTGGGACCTACTGACAAAGAGATGGAGGGACCCACTGACAACATGATGATGATGGGACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCCTGGGAGGTAAGAGTTaGAACTCCAAAACCTGCCTG | + |
Preference number: 2 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFLGGKS*NSKTCL Trigger: CAGGCAGGTTTTGGAGTTTCAACTCTTACCTCCCAG...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCAAGGTCCTCTACCATTaGGCAGTATCCCAGGACTCA | + |
Preference number: 2 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFKVLYH*AVSQDS Trigger: TGAGTCCTGGGATACTGCTCAATGGTAGAGGACCTT...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGAGGTTTCAGAAAAATaGTTCCAGGGAAAACAGCAG | + |
Preference number: 2 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVEVSEK*FQGKQQ Trigger: CTGCTGTTTTCCCTGGAAGCATTTTTCTGAAACCTC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATCATGGTGGACAGCGTTaGAAACACAGAGGGACACAG | + |
Preference number: 2 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDHGGQR*KHRGTQ Trigger: CTGTGTCCCTCTGTGTTTGCAACGCTGTCCACCATG...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGCCACAGCTGGGGTGTTaGCATAGGAAGATGAGACGG | + |
Preference number: 2 (lower is better) Translates to: CAASDFVDLMLNKQITAVPQLGC*HRKMRR Trigger: CCGTCTCATCTTCCTATGCCAACACCCCAGCTGTGG...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 90 bp | CCTAACTTTGTTAGTTTTCTAGTGTTGGGGTTTGATCCCACAGCCTaGCATGCACAAGGCAAGTGCTTCAACACCAAGTGTACCCACACC | + |
Preference number: 2 (lower is better) Translates to: PNFVSFLVLGFDPTA*HAQGKCFNTKCTHT Trigger: GGTGTGGGTACACTTGGTGTTGAAGCACTTGCCTTGTGCATGCAAGGCTGTGGGATCAAACCCCAACACTAGAAAACTAACAAAGTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGAGAGGAGGCAGAATCTaGGAAATGATGACAGAATTT | + |
Preference number: 2 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVRGGRI*EMMTEF Trigger: AAATTCTGTCATCATTTCTCAGATTCTGCCTCCTCT...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGTCTCATCATGGTATTaGTTCAAAGCAGTTGACTGT | + |
Preference number: 2 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVVSSWY*FKAVDC Trigger: ACAGTCAACTGCTTTGAAGCAATACCATGATGAGAC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATGAAAACAGCAGAGCCTaGGTAAGGGTCCCCATCATA | + |
Preference number: 2 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDENSRA*VRVPII Trigger: TATGATGGGGACCCTTACCCAGGCTCTGCTGTTTTC...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGGCCCTGAAAGCATGGTaGACAGCGTTGCAAACACAG | + |
Preference number: 2 (lower is better) Translates to: CAASDFVDLMLNKQITAVALKAW*TALQTQ Trigger: CTGTGTTTGCAACGCTGTCCACCATGCTTTCAGGGC...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGTCCAGCAGTATGCTTaGCATTTTCTATATCCATCT | + |
Preference number: 2 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVVQQYA*HFLYPS Trigger: AGATGGATATAGAAAATGCCAAGCATACTGCTGGAC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGATGAGACGGCCACAGTaGCAGCTTCAGAATGCAGCA | + |
Preference number: 2 (lower is better) Translates to: CAASDFVDLMLNKQITAVMRRPQ*QLQNAA Trigger: TGCTGCATTCTGAAGCTGCCACTGTGGCCGTCTCAT...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCGGCCATGTATGCTATTaGCAGAATTCTCAACTGGCA | + |
Preference number: 2 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFGHVCY*QNSQLA Trigger: TGCCAGTTGAGAATTCTGTCAATAGCATACATGGCC...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGGATTTATCTCTGTCTaGTTTTGTTCAGGAAGATCA | + |
Preference number: 2 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVGFISV*FCSGRS Trigger: TGATCTTCCTGAACAAAATCAGACAGAGATAAATCC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAAAGTTATGCAAAGTTTaGAAGCTGAAAGCACCTTTC | + |
Preference number: 2 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEKLCKV*KLKAPF Trigger: GAAAGGTGCTTTCAGCTTGCAAACTTTGCATAACTT...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR-3UTR GCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATATGTCCAGCTGCTGCTaGTCTTCCTCTTCTTTTACC | + |
Preference number: 2 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDMSSCC*SSSSFT Trigger: GGTAAAAGAAGAGGAAGAGCAGCAGCAGCTGGACAT...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CAA 90 bp | AGAGCACAGCGTGATTACATGGGAAGACAGGAGAGGATCACTTGTTaGGAAACTCTTAAAATACAGGTTGTGCTTCTTCTTCCCTGCAGC | + |
Preference number: 2 (lower is better) Translates to: RAQRDYMGRQERITC*ETLKIQVVLLLPCS Trigger: GCTGCAGGGAAGAAGAAGCACAACCTGTATTTTAAGAGTTTCCAAACAAGTGATCCTCTCCTGTCTTCCCATGTAATCACGCTGTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR TCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCCTGGGAGGTAAGAGTTaGAACTCCAAAACCTGCCTG | + |
Preference number: 2 (lower is better) Translates to: QNGLRRGYNFATGSLDSSLGGKS*NSKTCL Trigger: CAGGCAGGTTTTGGAGTTTCAACTCTTACCTCCCAG...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR-3UTR TCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATTTTGTTTCTCCTACCTaGAGACGTTTGTCTCAGAGG | + |
Preference number: 2 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDFVSPT*RRLSQR Trigger: CCTCTGAGACAAACGTCTTCAGGTAGGAGAAACAAA...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR GCA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAGGACAGAATCTGCACTaGTCAGACCAGCATTTGGCT | + |
Preference number: 2 (lower is better) Translates to: VEQLYRLLHAEKSADWCRGQNLH*SDQHLA Trigger: AGCCAAATGCTGGTCTGAGCAGTGCAGATTCTGTCC...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR GCA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGATCCCACAGCCTTGCATaGACAAGGCAAGTGCTTCAA | + |
Preference number: 2 (lower is better) Translates to: VEQLYRLLHAEKSADWCRSHSLA*TRQVLQ Trigger: TTGAAGCACTTGCCTTGTGCATGCAAGGCTGTGGGA...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR GCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGAGAGAGCACTTTATTTaGTCGCTATTCAGGACTCGG | + |
Preference number: 2 (lower is better) Translates to: LRRGYNFATGSLDSSFRQREHFI*SLFRTR Trigger: CCGAGTCCTGAATAGCGAGCAAATAAAGTGCTCTCT...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
3UTR-3UTR TCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCAAACATGCACAGCATGTaGAGGGCAGAGCAATTGTCC | + |
Preference number: 2 (lower is better) Translates to: IQSGKMDYYIECFQGDDANMHSM*RAEQLS Trigger: GGACAATTGCTCTGCCCTTCACATGCTGTGCATGTT...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR GCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCAGTCAGTAGGTCCCACTaGAGATGGACAGAATCTGCA | + |
Preference number: 2 (lower is better) Translates to: IQSGKMDYYIECFQGDDAVSRSH*RWTESA Trigger: TGCAGATTCTGTCCATCTGCAGTGGGACCTACTGAC...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATGTTGCAGCATGGCCATaGACTTTTAATGTAGAACAT | + |
Preference number: 2 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDVAAWP*TFNVEH Trigger: ATGTTCTACATTAAAAGTCCATGGCCATGCTGCAAC...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGGTGTTAACTACAGTATaGACAACTGCTCACCAGAAC | + |
Preference number: 2 (lower is better) Translates to: CAASDFVDLMLNKQITAVVLTTV*TTAHQN Trigger: GTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTGGTGCCCTGAAAGCATaGTGGACAGCGTTGCAAACA | + |
Preference number: 2 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPGALKA*WTALQT Trigger: TGTTTGCAACGCTGTCCACCATGCTTTCAGGGCACC...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGATTAAAATACAGGTTGTaGTTCTTCTTCCCTGCAGCG | + |
Preference number: 2 (lower is better) Translates to: VEQLYRLLHAEKSADWCRLKYRL*FFFPAA Trigger: CGCTGCAGGGAAGAAGAAGCACAACCTGTATTTTAA...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCATGTTCTGGCCATGCTTaGGAAGGACTTACGTCTACA | + |
Preference number: 2 (lower is better) Translates to: IQSGKMDYYIECFQGDDACSGHA*EGLTST Trigger: TGTAGACGTAAGTCCTTCCCAAGCATGGCCAGAACA...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATGTAAGCATGAACACATaGAACAACATTTCATCCTTT | + |
Preference number: 2 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDVSMNT*NNISSF Trigger: AAAGGATGAAATGTTGTTGCATGTGTTCATGCTTAC...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCATTCCTTTTGGCATATTaGCTGAAAACAGACCCACCC | + |
Preference number: 2 (lower is better) Translates to: IQSGKMDYYIECFQGDDAFLLAY*LKTDPP Trigger: GGGTGGGTCTGTTTTCAGGCAATATGCCAAAAGGAA...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCACTTTGTAGTTTGTGCTaGCAGTTTCCCCATTTCCCT | + |
Preference number: 2 (lower is better) Translates to: IQSGKMDYYIECFQGDDALCSLC*QFPHFP Trigger: AGGGAAATGGGGAAACTGCCAGCACAAACTACAAAG...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 90 bp | TTGCCTCTGATTGTCAGAATTCTGTGTCTTCATTCTGAAAGGCTGTaGTTCTGCCTTGTTATGCGACCTCAAATCCATTTTAGCTTGAAA | + |
Preference number: 2 (lower is better) Translates to: LPLIVRILCLHSERL*FCLVMRPQIHFSLK Trigger: TTTCAAGCTAAAATGGATTTGAGGTCGCATAACAAGGCAGAACAACAGCCTTTCAGAATGAAGACACAGAATTCTGACAATCAGAGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | TTAAACAATACACTTTGTAGTTTGTGCTGGCAGTTTCCCCATTTCCCTGAACTAGGAAAATGCCTGGCATaGCTTTTAGCAAGGAAAGTT | + |
Preference number: 2 (lower is better) Translates to: LNNTLCSLCWQFPHFPELGKCLA*LLARKV Trigger: AACTTTCCTTGCTAAAAGTCATGCCAGGCATTTTCC...TAGTTCAGGGAAATGGGGAAACTGCCAGCACAAACTACAAAGTGTATTGTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGGTAAGCATGAACACATaGAACAACATTTCATCCTTT | + |
Preference number: 2 (lower is better) Translates to: LRRGYNFATGSLDSSFRQVSMNT*NNISSF Trigger: AAAGGATGAAATGTTGTTGCATGTGTTCATGCTTAC...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR-3UTR GCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTCTTTCTATAGACTTCTaGCTCATGTGTGTGCCACCT | + |
Preference number: 2 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPLSIDF*LMCVPP Trigger: AGGTGGCACACACATGAGGCAGAAGTCTATAGAAAG...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGACAAGCAAACTATAGGTaGTCAGGAAAGCTTTGTTAT | + |
Preference number: 2 (lower is better) Translates to: VEQLYRLLHAEKSADWCRQANYR*SGKLCY Trigger: ATAACAAAGCTTTCCTGAGCACCTATAGTTTGCTTG...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTTCATCATGTTGTCAGTaGGTCCCTCCATCTCTTTGT | + |
Preference number: 2 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPSSCCQ*VPPSLC Trigger: ACAAAGAGATGGAGGGACCCACTGACAACATGATGA...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 90 bp | TGGACTTTTAATGTAGAACATACAAGACTTCAAAAAGAACTCCGCTaGACAGATGTATCCAGGTCTTTCCAGACTTACATGTTCTCCTCT | + |
Preference number: 2 (lower is better) Translates to: WTFNVEHTRLQKELR*TDVSRSFQTYMFSS Trigger: AGAGGAGAACATGTAAGTCTGGAAAGACCTGGATACATCTGTCAAGCGGAGTTCTTTTTGAAGTCTTGTATGTTCTACATTAAAAGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR TCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCACATTTCATAGACAGCTaGGACATGAGGATTGTGATT | + |
Preference number: 2 (lower is better) Translates to: IQSGKMDYYIECFQGDDAHFIDS*DMRIVI Trigger: AATCACAATCCTCATGTCTCAGCTGTCTATGAAATG...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCAACTGGCAAACATAAGTaGCTAACTTGGTTCTTAGCT | + |
Preference number: 2 (lower is better) Translates to: IQSGKMDYYIECFQGDDATGKHK*LTWFLA Trigger: AGCTAAGAACCAAGTTAGGCACTTATGTTTGCCAGT...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCAAATTCTAAAGTTCACTaGGAGGTAAGAGTTGAAACT | + |
Preference number: 2 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPNSKVH*EVRVET Trigger: AGTTTCAACTCTTACCTCCCAGTGAACTTTAGAATT...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | TTAAACAATACACTTTGTAGTTTGTGCTGGCAGTTTCCCCATTTCCCTGAACTAGGCTTAGAAATAATTTaGACTGTTTCCCTTTGGATG | + |
Preference number: 2 (lower is better) Translates to: LNNTLCSLCWQFPHFPELGLEII*TVSLWM Trigger: CATCCAAAGGGAAACAGTCCAAATTATTTCTAAGCC...TAGTTCAGGGAAATGGGGAAACTGCCAGCACAAACTACAAAGTGTATTGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTCCTCCTCCTCCTTTTTaGAGAGGTTATTACTATGTA | + |
Preference number: 2 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPPPPPF*RGYYYV Trigger: TACATAGTAATAACCTCTCCAAAAAGGAGGAGGAGG...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 90 bp | TTTTATAGACACTTTGACATGAACAAGTATTCTGATGTTGAACAATaGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGA | + |
Preference number: 2 (lower is better) Translates to: FYRHFDMNKYSDVEQ*YRLLHAEKSADWCR Trigger: TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAACATCAGAATACTTGTTCATGTCAAAGTGTCTATAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR GCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTAAGTTATGCAAAGTTTaGAAGCTGAAAGCACCTTTC | + |
Preference number: 2 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPKLCKV*KLKAPF Trigger: GAAAGGTGCTTTCAGCTTGCAAACTTTGCATAACTT...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCACAGCTTTGTCTCTTATaGGGGTTCTACTTTTATTTT | + |
Preference number: 2 (lower is better) Translates to: IQSGKMDYYIECFQGDDAQLCLL*GFYFYF Trigger: AAAATAAAAGTAGAACCCCCATAAGAGACAAAGCTG...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CCA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGAATTCTAAAGTTCACTaGGAGGTAAGAGTTGAAACT | + |
Preference number: 2 (lower is better) Translates to: QDTQNGLRRGYNFATGSLNSKVH*EVRVET Trigger: AGTTTCAACTCTTACCTCCCAGTGAACTTTAGAATT...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR TCA 72 bp | TCTGATTTGGCTGAAGCGGCTGCAGTGTGTCAGGGCTaGGTGTACAGGGCGTTGTTCCTGTATGGTGTCCCC | + |
Preference number: 3 (lower is better) Translates to: SDLAEAAAVCQG*VYRALFLYGVP Trigger: GGGGACACCATACAGGAACAACGCCCTGTACACTCAGCCCTGACACACTGCAGCCGCTTCAGCCAAATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 72 bp | ACAGGACACCACAGCTGGGGTGTTGGCATAGGAAGATaGGACGGCCACAGTGGCAGCTTCAGAATGCAGCAG | + |
Preference number: 3 (lower is better) Translates to: TGHHSWGVGIGR*DGHSGSFRMQQ Trigger: CTGCTGCATTCTGAAGCTGCCACTGTGGCCGTCTCATCTTCCTATGCCAACACCCCAGCTGTGGTGTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 72 bp | AAGCAAGGTGAGTCTGGTGAGCAGGGTAACCCCCAGTaGCCAGTGCCTCTGGATTTGGTGTTCTCAGTAGGA | + |
Preference number: 3 (lower is better) Translates to: KQGESGEQGNPQ*PVPLDLVFSVG Trigger: TCCTACTGAGAACACCAAATCCAGAGGCACTGGGCACTGGGGGTTACCCTGCTCACCAGACTCACCTTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 72 bp | AGTGGGTCCCTCCATCTCTTTGTCAGTAGGTCCCACTaGAGATGGACAGAATCTGCACTGCTCAGACCAGCA | + |
Preference number: 3 (lower is better) Translates to: SGSLHLFVSRSH*RWTESALLRPA Trigger: TGCTGGTCTGAGCAGTGCAGATTCTGTCCATCTGCAGTGGGACCTACTGACAAAGAGATGGAGGGACCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 72 bp | GGCCACAGGGATGTCAGGAGCCTAGTTGTTTCTGACTaGATGCAGAGAACATGCACAGCATGTGAAGGGCAG | + |
Preference number: 3 (lower is better) Translates to: GHRDVRSLVVSD*MQRTCTACEGQ Trigger: CTGCCCTTCACATGCTGTGCATGTTCTCTGCATGCAGTCAGAAACAACTAGGCTCCTGACATCCCTGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CAA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGTGTTCTGGCCATGCTaGGGAAGGACTTACGTCTAC | + |
Preference number: 3 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVVFWPC*GRTYVY Trigger: GTAGACGTAAGTCCTTCCCAAGCATGGCCAGAACAC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 72 bp | AGGGCTGCTGCAGTTACCGAGTGTTCTGGCCATGCTTaGGAAGGACTTACGTCTACAAGGACATTTTCCTGC | + |
Preference number: 3 (lower is better) Translates to: RAAAVTECSGHA*EGLTSTRTFSC Trigger: GCAGGAAAATGTCCTTGTAGACGTAAGTCCTTCCCAAGCATGGCCAGAACACTCGGTAACTGCAGCAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 72 bp | GGAAGTATGCAGCCCAGCCCAGTGTTAACTACAGTATaGACAACTGCTCACCAGAACTGCAAAGCCAAGGCC | + |
Preference number: 3 (lower is better) Translates to: GSMQPSPVLTTV*TTAHQNCKAKA Trigger: GGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACACTGGGCTGGGCTGCATACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 72 bp | TCCCTCCATCTCTTTGTCAGTAGGTCCCACTGCAGATaGACAGAATCTGCACTGCTCAGACCAGCATTTGGC | + |
Preference number: 3 (lower is better) Translates to: SLHLFVSRSHCR*TESALLRPAFG Trigger: GCCAAATGCTGGTCTGAGCAGTGCAGATTCTGTCCATCTGCAGTGGGACCTACTGACAAAGAGATGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 72 bp | CAAACGAGATTTGTGTGTGTGTTTTGGGGCAGCACATaGGGTGCCCTGAAAGCATGGTGGACAGCGTTGCAA | + |
Preference number: 3 (lower is better) Translates to: QTRFVCVFWGST*GALKAWWTALQ Trigger: TTGCAACGCTGTCCACCATGCTTTCAGGGCACCCCATGTGCTGCCCCAAAACACACACACAAATCTCGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 72 bp | TTACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTaGCTGAAGCGGCTGCAGTGTGTCAGGGCTGAGTGT | + |
Preference number: 3 (lower is better) Translates to: LPQSGSTVVSLI*LKRLQCVRAEC Trigger: ACACTCAGCCCTGACACACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CAA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGAACGTCTTGGGCAATTaGCACTGGTTAAGAGGCCCA | + |
Preference number: 3 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVNVLGN*HWLRGP Trigger: TGGGCCTCTTAACCAGTGCAAATTGCCCAAGACGTT...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 72 bp | GGGTTTGATCCCACAGCCTTGCATGCACAAGGCAAGTaGTTCAACACCAAGTGTACCCACACCCAGTATGTT | + |
Preference number: 3 (lower is better) Translates to: GFDPTALHAQGK*FNTKCTHTQYV Trigger: AACATACTGGGTGTGGGTACACTTGGTGTTGAAGCACTTGCCTTGTGCATGCAAGGCTGTGGGATCAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 72 bp | GCCAAGAGTGTCAGAAGGCTTCATGAGGCTAAGAGCTaGATCTGTCCTTGTCAGGGAAGAGAACTGAACCCT | + |
Preference number: 3 (lower is better) Translates to: AKSVRRLHEAKS*ICPCQGRELNP Trigger: AGGGTTCAGTTCTCTTCCCTGACAAGGACAGATTCAGCTCTTAGCCTCATGAAGCCTTCTGACACTCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 72 bp | ACTAGGCTGGCCTTGACCTCAAGATTAGCCTACCTCTaGCTCCTTCGTGTAGAGATTCCAGTGTATACCACT | + |
Preference number: 3 (lower is better) Translates to: TRLALTSRLAYL*LLRVEIPVYTT Trigger: AGTGGTATACACTGGAATCTCTACACGAAGGAGGCAGAGGTAGGCTAATCTTGAGGTCAAGGCCAGCCTAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | TCAGTAGGTCCCACTGCAGATGGACAGAATCTGCACTaGTCAGACCAGCATTTGGCTTTTGCCAAAGCAGTA | + |
Preference number: 3 (lower is better) Translates to: SVGPTADGQNLH*SDQHLAFAKAV Trigger: TACTGCTTTGGCAAAAGCCAAATGCTGGTCTGAGCAGTGCAGATTCTGTCCATCTGCAGTGGGACCTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | CATGGGATTGTACTTTACAAAGGCAAGTGGAGGACATaGCTGTTGAAACCATGGGAAGTATGCAGCCCAGCC | + |
Preference number: 3 (lower is better) Translates to: HGIVLYKGKWRT*LLKPWEVCSPA Trigger: GGCTGGGCTGCATACTTCCCATGGTTTCAACAGCCATGTCCTCCACTTGCCTTTGTAAAGTACAATCCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR TCA 72 bp | CTAAGAGCTGAATCTGTCCTTGTCAGGGAAGAGAACTaGACCCTTGTGTGGTTGGCATGGAAGAGGGAGATA | + |
Preference number: 3 (lower is better) Translates to: LRAESVLVREEN*TLVWLAWKREI Trigger: TATCTCCCTCTTCCATGCCAACCACACAAGGGTTCAGTTCTCTTCCCTGACAAGGACAGATTCAGCTCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR TCA 72 bp | TTGTACTTTACAAAGGCAAGTGGAGGACATGGCTGTTaGAACCATGGGAAGTATGCAGCCCAGCCCAGTGTT | + |
Preference number: 3 (lower is better) Translates to: LYFTKASGGHGC*NHGKYAAQPSV Trigger: AACACTGGGCTGGGCTGCATACTTCCCATGGTTTCAACAGCCATGTCCTCCACTTGCCTTTGTAAAGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | AGGAGCCTAGTTGTTTCTGACTGCATGCAGAGAACATaGACAGCATGTGAAGGGCAGAGCAATTGTCCTTAC | + |
Preference number: 3 (lower is better) Translates to: RSLVVSDCMQRT*TACEGQSNCPY Trigger: GTAAGGACAATTGCTCTGCCCTTCACATGCTGTGCATGTTCTCTGCATGCAGTCAGAAACAACTAGGCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | GCATATGTGTTAAAGAAGGCAGGGATGCAGATGACGTaGACAGTGCGCCATTTGGACTACAGTGTTATTGCG | + |
Preference number: 3 (lower is better) Translates to: AYVLKKAGMQMT*TVRHLDYSVIA Trigger: CGCAATAACACTGTAGTCCAAATGGCGCACTGTGCACGTCATCTGCATCCCTGCCTTCTTTAACACATATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | CAGGTGAGTGAGACAAGGTGTAGCCATTTATGCGTGTaGTTTAGCTCCTGGCAAGAATCTGTATCGAAAGCC | + |
Preference number: 3 (lower is better) Translates to: QVSETRCSHLCV*FSSWQESVSKA Trigger: GGCTTTCGATACAGATTCTTGCCAGGAGCTAAAGCACACGCATAAATGGCTACACCTTGTCTCACTCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | CCAACAGAGTACAGGACAGAGCACAGCGTGATTACATaGGAAGACAGGAGAGGATCACTTGTTTGGAAACTC | + |
Preference number: 3 (lower is better) Translates to: PTEYRTEHSVIT*EDRRGSLVWKL Trigger: GAGTTTCCAAACAAGTGATCCTCTCCTGTCTTCCCATGTAATCACGCTGTGCTCTGTCCTGTACTCTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGCTGTCTCCCCCGTTTTaGTCTTCTACAGTGCTGGAG | + |
Preference number: 3 (lower is better) Translates to: CAASDFVDLMLNKQITAVLSPPF*SSTVLE Trigger: CTCCAGCACTGTAGAAGACAAAAACGGGGGAGACAG...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGATTTGTGTGTGTGTTTaGGGGCAGCACATGGGGTGC | + |
Preference number: 3 (lower is better) Translates to: CAASDFVDLMLNKQITAVICVCV*GQHMGC Trigger: GCACCCCATGTGCTGCCCCAAAACACACACACAAAT...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCAAGAGAGCACTTTATTaGCTCGCTATTCAGGACTCG | + |
Preference number: 3 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFKRALY*LAIQDS Trigger: CGAGTCCTGAATAGCGAGCAAATAAAGTGCTCTCTT...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGCAAACAGACAGTAAATaGAAATCATTGAGGAAGCTG | + |
Preference number: 3 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVQTDSK*KSLRKL Trigger: CAGCTTCCTCAATGATTTCAATTTACTGTCTGTTTG...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR TCA 72 bp | ATCGAAAGCCAACAGAGTACAGGACAGAGCACAGCGTaGTTACATGGGAAGACAGGAGAGGATCACTTGTTT | + |
Preference number: 3 (lower is better) Translates to: IESQQSTGQSTA*LHGKTGEDHLF Trigger: AAACAAGTGATCCTCTCCTGTCTTCCCATGTAATCACGCTGTGCTCTGTCCTGTACTCTGTTGGCTTTCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | CCCATTTCCCTGAACTATATACACACATGCACGAAATaGATTTTGCTGCCGCAAAACCTGAGCATTGCCAGG | + |
Preference number: 3 (lower is better) Translates to: PISLNYIHTCTK*ILLPQNLSIAR Trigger: CCTGGCAATGCTCAGGTTTTGCGGCAGCAAAATGCATTTCGTGCATGTGTGTATATAGTTCAGGGAAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | GACGTGCACAGTGCGCCATTTGGACTACAGTGTTATTaGGCTGCCTCAGACTTTGTGGATTTGATGTTGAAT | + |
Preference number: 3 (lower is better) Translates to: DVHSAPFGLQCY*AASDFVDLMLN Trigger: ATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCAATAACACTGTAGTCCAAATGGCGCACTGTGCACGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTaGAAAGCCAAGGCCTTCCTCTTCTTAGCAGAAACT | + |
Preference number: 3 (lower is better) Translates to: VLTTVWTTAHQN*KAKAFLFLAET Trigger: AGTTTCTGCTAAGAAGAGGAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | TTGGTCACTGAGCTAGCTAATGGTGAAATGAACTCTTaGAAGCACAACCTTCCAATAGCCCCTTCAGGTAGT | + |
Preference number: 3 (lower is better) Translates to: LVTELANGEMNS*KHNLPIAPSGS Trigger: ACTACCTGAAGGGGCTATTGGAAGGTTGTGCTTCCAAGAGTTCATTTCACCATTAGCTAGCTCAGTGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | ACAGCATGTGAAGGGCAGAGCAATTGTCCTTACTTCTaGTTACCAACCACCTTTTCTGGGCAAATAGAATCC | + |
Preference number: 3 (lower is better) Translates to: TACEGQSNCPYF*LPTTFSGQIES Trigger: GGATTCTATTTGCCCAGAAAAGGTGGTTGGTAACCAGAAGTAAGGACAATTGCTCTGCCCTTCACATGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | ACACATTCTGTACAGTCCAGCAGAGATCTGGAGCATTaGTCAAGATGTAGCCAAACGAGATTTGTGTGTGTG | + |
Preference number: 3 (lower is better) Translates to: THSVQSSRDLEH*SRCSQTRFVCV Trigger: CACACACACAAATCTCGTTTGGCTACATCTTGACCAATGCTCCAGATCTCTGCTGGACTGTACAGAATGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCTATCTCTGTCTGATTTaGTTCAGGAAGATCAAGTGG | + |
Preference number: 3 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFYLCLI*FRKIKW Trigger: CCACTTGATCTTCCTGAACAAAATCAGACAGAGATA...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAGTAGCCAAACGAGATTaGTGTGTGTGTTTTGGGGCA | + |
Preference number: 3 (lower is better) Translates to: VEQLYRLLHAEKSADWCRVAKRD*CVCFGA Trigger: TGCCCCAAAACACACACACAAATCTCGTTTGGCTAC...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAGTTAGTTTTCTAGTGTaGGGGTTTGATCCCACAGCC | + |
Preference number: 3 (lower is better) Translates to: VEQLYRLLHAEKSADWCRVSFLV*GFDPTA Trigger: GGCTGTGGGATCAAACCCCAACACTAGAAAACTAAC...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR TCA 72 bp | CTGGATTTGGTGTTCTCAGTAGGAAAATGCCTGGCATaGCTTTTAGCAAGGAAAGTTCCAGGCTTGGAAACA | + |
Preference number: 3 (lower is better) Translates to: LDLVFSVGKCLA*LLARKVPGLET Trigger: TGTTTCCAAGCCTGGAACTTTCCTTGCTAAAAGTCATGCCAGGCATTTTCCTACTGAGAACACCAAATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR TCA 72 bp | TCTTCCCTGCAGCGTTCAGAGCTTTATAGACTAGTATaGAAACCCTCTAAGACACTGAAGGGAATGATGGAC | + |
Preference number: 3 (lower is better) Translates to: SSLQRSELYRLV*KPSKTLKGMMD Trigger: GTCCATCATTCCCTTCAGTGTCTTAGAGGGTTTTCATACTAGTCTATAAAGCTCTGAACGCTGCAGGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | ATTTCTTCCTGTCTCCCCCGTTTTTGTCTTCTACAGTaGTGGAGATTAATCAGGGTGTCATACATGCTAGGA | + |
Preference number: 3 (lower is better) Translates to: ISSCLPRFCLLQ*WRLIRVSYMLG Trigger: TCCTAGCATGTATGACACCCTGATTAATCTCCAGCACTGTAGAAGACAAAAACGGGGGAGACAGGAAGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | GTGCTTCAACACCAAGTGTACCCACACCCAGTATGTTaGAGATCAATAACTCCTGAGGACAGTACAATCTTT | + |
Preference number: 3 (lower is better) Translates to: VLQHQVYPHPVC*RSITPEDSTIF Trigger: AAAGATTGTACTGTCCTCAGGAGTTATTGATCTCCAACATACTGGGTGTGGGTACACTTGGTGTTGAAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCAAGAGAGCACTTTATTaGCTCGCTATTCAGGACTCG | + |
Preference number: 3 (lower is better) Translates to: QNGLRRGYNFATGSLDSSKRALY*LAIQDS Trigger: CGAGTCCTGAATAGCGAGCAAATAAAGTGCTCTCTT...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
3UTR-3UTR CAA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATGAAGGATTCATGGGATaGTACTTTACAAAGGCAAGT | + |
Preference number: 3 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDEGFMG*YFTKAS Trigger: ACTTGCCTTTGTAAAGTACAATCCCATGAATCCTTC...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR TCA 72 bp | TTTGCCTCTGATTGTCAGAATTCTGTGTCTTCATTCTaGAAGGCTGTTGTTCTGCCTTGTTATGCGACCTCA | + |
Preference number: 3 (lower is better) Translates to: FASDCQNSVSSF*KAVVLPCYATS Trigger: TGAGGTCGCATAACAAGGCAGAACAACAGCCTTTCAGAATGAAGACACAGAATTCTGACAATCAGAGGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | TTGTTCAGGAAGATCAAGTGGCTTTCTATAGACTTCTaGCTCATGTGTGTGCCACCTCACATCACAAATAGT | + |
Preference number: 3 (lower is better) Translates to: LFRKIKWLSIDF*LMCVPPHITNS Trigger: ACTATTTGTGATGTGAGGTGGCACACACATGAGGCAGAAGTCTATAGAAAGCCACTTGATCTTCCTGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | CAATTGTCCTTACTTCTGGTTACCAACCACCTTTTCTaGGCAAATAGAATCCCATCCTTTGCGGAATACATG | + |
Preference number: 3 (lower is better) Translates to: QLSLLLVTNHLF*ANRIPSFAEYM Trigger: CATGTATTCCGCAAAGGATGGGATTCTATTTGCCCAGAAAAGGTGGTTGGTAACCAGAAGTAAGGACAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATAAAGTTATGCAAAGTTaGCAAGCTGAAAGCACCTTT | + |
Preference number: 3 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDKVMQS*QAESTF Trigger: AAAGGTGCTTTCAGCTTGCAAACTTTGCATAACTTT...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATGAAATTAAAAACGTCTaGGGCAATTTGCACTGGTTA | + |
Preference number: 3 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDEIKNV*GNLHWL Trigger: TAACCAGTGCAAATTGCCCAAGACGTTTTTAATTTC...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGATCCTCCTCCTCCTTTTaGGAGAGGTTATTACTATGT | + |
Preference number: 3 (lower is better) Translates to: VEQLYRLLHAEKSADWCRSSSSF*ERLLLC Trigger: ACATAGTAATAACCTCTCCAAAAAGGAGGAGGAGGA...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGTGTGGTGGAATTTCCTaGCATCTAAGGAAATGGAAA | + |
Preference number: 3 (lower is better) Translates to: CAASDFVDLMLNKQITAVCGGIS*HLRKWK Trigger: TTTCCATTTCCTTAGATGCAAGGAAATTCCACCACA...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAACACCTCTGAGTCTTTaGCCTCTGATTGTCAGAATT | + |
Preference number: 3 (lower is better) Translates to: VEQLYRLLHAEKSADWCRTPLSL*PLIVRI Trigger: AATTCTGACAATCAGAGGCAAAAGACTCAGAGGTGT...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGATTGGTCTCTTCCTTTaGGCATATTGCCTGAAAACA | + |
Preference number: 3 (lower is better) Translates to: CAASDFVDLMLNKQITAVIGLFL*AYCLKT Trigger: TGTTTTCAGGCAATATGCCAAAAGGAAGAGACCAAT...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR TCA 72 bp | AGATCTGGTCTCATCATGGTATTGCTTCAAAGCAGTTaGCTGTGTCAGAGTGAGAGCATTTCTAGTGAAATG | + |
Preference number: 3 (lower is better) Translates to: RSGLIMVLLQSS*LCQSESISSEM Trigger: CATTTCACTAGAAATGCTCTCACTCTGACACAGTCAACTGCTTTGAAGCAATACCATGATGAGACCAGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | TCTCTTTTCCTATTAGATCTGGTCTCATCATGGTATTaGTTCAAAGCAGTTGACTGTGTCAGAGTGAGAGCA | + |
Preference number: 3 (lower is better) Translates to: SLFLLDLVSSWY*FKAVDCVRVRA Trigger: TGCTCTCACTCTGACACAGTCAACTGCTTTGAAGCAATACCATGATGAGACCAGATCTAATAGGAAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | ATCCTGGTTACAGAACTGAACCCAAAACATCTTGTTTaGAAATATAGTGGAATAAAGCACGTGGAGGCAGGT | + |
Preference number: 3 (lower is better) Translates to: ILVTELNPKHLV*KYSGIKHVEAG Trigger: ACCTGCCTCCACGTGCTTTATTCCACTATATTTGCAAACAAGATGTTTTGGGTTCAGTTCTGTAACCAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | TTTAGAGAACAATTAGGTCAATTTCAGGGATCCACTTaGTGTATGTGTGGACCTACAGATAGGTCCCTCATT | + |
Preference number: 3 (lower is better) Translates to: FREQLGQFQGST*CMCGPTDRSLI Trigger: AATGAGGGACCTATCTGTAGGTCCACACATACACCAAGTGGATCCCTGAAATTGACCTAATTGTTCTCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCAAAACCTGCCTGCTATaGGAAATGAAAGGAGCAAAA | + |
Preference number: 3 (lower is better) Translates to: QNGLRRGYNFATGSLDSSKTCLL*EMKGAK Trigger: TTTTGCTCCTTTCATTTCCAATAGCAGGCAGGTTTT...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
3UTR-3UTR CAA 90 bp | TTAAACAATACACTTTGTAGTTTGTGCTGGCAGTTTCCCCATTTCCCTGAACTATCAGTAGCTGGAGCTTaGATTTCCACAAAGCAAGGT | + |
Preference number: 3 (lower is better) Translates to: LNNTLCSLCWQFPHFPELSVAGA*ISTKQG Trigger: ACCTTGCTTTGTGGAAATCAAAGCTCCAGCTACTGA...TAGTTCAGGGAAATGGGGAAACTGCCAGCACAAACTACAAAGTGTATTGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCATTAGCAGCTCTTTATTaGTATGTTGGACAGCAGATC | + |
Preference number: 3 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPLAALY*YVGQQI Trigger: GATCTGCTGTCCAACATACAAATAAAGAGCTGCTAA...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR-3UTR CAA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAAAATGGACTACTATATaGAATGTTTCCAAGGTGACG | + |
Preference number: 3 (lower is better) Translates to: VEQLYRLLHAEKSADWCRKWTTI*NVSKVT Trigger: CGTCACCTTGGAAACATTCAATATAGTAGTCCATTT...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR GCA 72 bp | AGAATTCTGTGTCTTCATTCTGAAAGGCTGTTGTTCTaGCTTGTTATGCGACCTCAAATCCATTTTAGCTTG | + |
Preference number: 3 (lower is better) Translates to: RILCLHSERLLF*LVMRPQIHFSL Trigger: CAAGCTAAAATGGATTTGAGGTCGCATAACAAGGCAGAACAACAGCCTTTCAGAATGAAGACACAGAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | ATCTTTGAAATTAAAAACGTCTTGGGCAATTTGCACTaGTTAAGAGGCCCAGCAGAAACAGCTTTGCCATTA | + |
Preference number: 3 (lower is better) Translates to: IFEIKNVLGNLH*LRGPAETALPL Trigger: TAATGGCAAAGCTGTTTCTGCTGGGCCTCTTAACCAGTGCAAATTGCCCAAGACGTTTTTAATTTCAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | ATCAACTCTCTTTTCCTATTAGATCTGGTCTCATCATaGTATTGCTTCAAAGCAGTTGACTGTGTCAGAGTG | + |
Preference number: 3 (lower is better) Translates to: INSLFLLDLVSS*YCFKAVDCVRV Trigger: CACTCTGACACAGTCAACTGCTTTGAAGCAATACCATGATGAGACCAGATCTAATAGGAAAAGAGAGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | GGCCAGCATGGGAATAAGAATGTTAATAAGAGAATATaGGAATGGACACTGGTCATCAACTCTCTTTTCCTA | + |
Preference number: 3 (lower is better) Translates to: GQHGNKNVNKRI*EWTLVINSLFL Trigger: TAGGAAAAGAGAGTTGATGACCAGTGTCCATTCCCATATTCTCTTATTAACATTCTTATTCCCATGCTGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR TCA 72 bp | TTGTACTCACAAAATAGTTGGCAAAGGGCCAGTTACTaGAACCGTGGTTTGAAAATATTCAAAGCGGGAAAA | + |
Preference number: 3 (lower is better) Translates to: LYSQNSWQRASY*NRGLKIFKAGK Trigger: TTTTCCCGCTTTGAATATTTTCAAACCACGGTTTCAGTAACTGGCCCTTTGCCAACTATTTTGTGAGTACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CCA 72 bp | AAGCTACATAGAGATAGGTATCAGTATACTCAGAGCTaGTTGGGCCACATAGTTTTCTGTCAGAATACTATT | + |
Preference number: 3 (lower is better) Translates to: KLHRDRYQYTQS*LGHIVFCQNTI Trigger: AATAGTATTCTGACAGAAAACTATGTGGCCCAACCAGCTCTGAGTATACTGATACCTATCTCTATGTAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR-3UTR CAA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGAAAACCTGCCTGCTATaGGAAATGAAAGGAGCAAAA | + |
Preference number: 3 (lower is better) Translates to: QDTQNGLRRGYNFATGSLKTCLL*EMKGAK Trigger: TTTTGCTCCTTTCATTTCCAATAGCAGGCAGGTTTT...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR-3UTR CAA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTACTTTGAGGAAGACATaGCAGTGGCAAAATAACCAA | + |
Preference number: 3 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPTLRKT*QWQNNQ Trigger: TTGGTTATTTTGCCACTGCAATGTCTTCCTCAAAGT...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 72 bp | ATATTGTATAGAGAAACCATCCAGGATTGCCCCCAATaGGGCTTTTTGTATGCATTAATTACTGACAGTACT | + |
Preference number: 3 (lower is better) Translates to: ILYRETIQDCPQ*GFLYALITDST Trigger: AGTACTGTCAGTAATTAATGCATACAAAAAGCCTCATTGGGGGCAATCCTGGATGGTTTCTCTATACAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR GCA 72 bp | AGTGACTGTATGTGTTACCTTCAAGCAAACTATAGGTaGTCAGGAAAGCTTTGTTATATGTCAACAGAACAA | + |
Preference number: 3 (lower is better) Translates to: SDCMCYLQANYR*SGKLCYMSTEQ Trigger: TTGTTCTGTTGACATATAACAAAGCTTTCCTGAGCACCTATAGTTTGCTTGAAGGTAACACATACAGTCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR TCA 72 bp | CATTCTGGGAAATACCTCCTTGTAAAACAGCACAGTTaGAGATTTCTTAGAGGAAAGTGTTCATTTGTTTCT | + |
Preference number: 3 (lower is better) Translates to: HSGKYLLVKQHS*RFLRGKCSFVS Trigger: AGAAACAAATGAACACTTTCCTCTAAGAAATCTTCAACTGTGCTGTTTTACAAGGAGGTATTTCCCAGAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CCA 72 bp | CATGGGAATAAGAATGTTAATAAGAGAATATGGGAATaGACACTGGTCATCAACTCTCTTTTCCTATTAGAT | + |
Preference number: 3 (lower is better) Translates to: HGNKNVNKRIWE*TLVINSLFLLD Trigger: ATCTAATAGGAAAAGAGAGTTGATGACCAGTGTCCATTCCCATATTCTCTTATTAACATTCTTATTCCCATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGTGTGCTGGGGAGTGGTaGGCGGAAAGTCAGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVCAGEW*AESQLW Trigger: CCACAGCTGACTTTCCGCTCACCACTCCCCAGCACA...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR GCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGATGACCTCGGTCTGTaGCACAGCCAGCTGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEDDLGL*HSQLLL Trigger: CAGGAGCAGCTGGCTGTGGCACAGACCGAGGTCATC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGGGTGGTGGCAGGGGTaGTCTCTCAGTCTCTGTGAA | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEGWWQG*SLSLCE Trigger: TTCACAGAGACTGAGAGATCACCCCTGCCACCACCC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCCTCACGCTCACGCATaGTCTCCGCCTCCCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEPHAHA*SPPPSS Trigger: TGAGGAGGGAGGCGGAGACCATGCGTGAGCGTGAGG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCTGACAGCGCCTTCCTaGCCCACTTCCACCGGCTTG | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFELTAPS*PTSTGL Trigger: CAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGTTACTGGCAGTGGCCTaGCTGTGCTGGGCGGGGTCT | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFELLAVA*LCWAGS Trigger: AGACCCCGCCCAGCACAGCCAGGCCACTGCCAGTAA...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGTCAGCTGTGGTTACTaGCAGTGGCCTGGCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVVSCGY*QWPGCA Trigger: AGCACAGCCAGGCCACTGCCAGTAACCACAGCTGAC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGCGGAAAGTCAGCTGTaGTTACTGGCAGTGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEAESQL*LLAVAW Trigger: CCAGGCCACTGCCAGTAACCACAGCTGACTTTCCGC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGGTTGGAGCTCGTTTCTaGCAGCGCCTTCCTGGCCCA | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEVGARF*QRLPGP Trigger: TGGGCCAGGAAGGCGCTGTCAGAAACGAGCTCCAAC...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCCGTGGCACAGCTGGTaGAGCTGTCAATGCTGGAGG | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEPWHSW*SCQCWR Trigger: CCTCCAGCATTGACAGCTTCACCAGCTGTGCCACGG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATCTCTCAGTCTCTGTaGAGTCCGTGGCACAGCTGG | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEISQSL*SPWHSW Trigger: CCAGCTGTGCCACGGACTTCACAGAGACTGAGAGAT...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAACTCCACAGGACTTCGTaGTTAAGGCCCCCTACGTTG | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSELHRTS*LRPPTL Trigger: CAACGTAGGGGGCCTTAACCACGAAGTCCTGTGGAG...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCCTGACAGCGCCTTCCTaGCCCACTTCCACCGGCTTG | + |
Preference number: 4 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFLTAPS*PTSTGL Trigger: CAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAG...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGGAATGGAGGTGCCCTaGCTCTTTGGTGCTCATCTG | + |
Preference number: 4 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVGMEVP*LFGAHL Trigger: CAGATGAGCACCAAAGAGCCAGGGCACCTCCATTCC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGGATTCGGGTGGGAATaGGGCTGTGTCTTGGTGATT | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEGFGWE*GCVLVI Trigger: AATCACCAAGACACAGCCTCATTCCCACCCGAATCC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAAACTTCATCTGCAAATaGGAGGCAGAGGGTGGTGGC | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSENFICK*EAEGGG Trigger: GCCACCACCCTCTGCCTCTCATTTGCAGATGAAGTT...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCTGGCACTGTCAGGTTaGAAGGGACCATGGGAAGCC | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFELALSG*KGPWEA Trigger: GGCTTCCCATGGTCCCTTGCAACCTGACAGTGCCAG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGAAGGGAGGCTGTCCCTaGGGGAGGGCTTCTTCTAGA | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEKGGCP*GRASSR Trigger: TCTAGAAGAAGCCCTCCCCCAGGGACAGCCTCCCTT...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGGAGAAACCTTTGGATaGTCCCTGACAGTGTGCCGA | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEGETFG*SLTVCR Trigger: TCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR CAA 72 bp | TGCACAGCCGGCAGCTTCTCATCAGTAGCTGGAGCTTaGATTTCCACAAAGCAAGGTGAGTCTGGTGAGCAG | + |
Preference number: 4 (lower is better) Translates to: CTAGSFSSVAGA*ISTKQGESGEQ Trigger: CTGCTCACCAGACTCACCTTGCTTTGTGGAAATCAAAGCTCCAGCTACTGATGAGAAGCTGCCGGCTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | AAGGCAGGGATGCAGATGACGTGCACAGTGCGCCATTaGGACTACAGTGTTATTGCGCTGCCTCAGACTTTG | + |
Preference number: 4 (lower is better) Translates to: KAGMQMTCTVRH*DYSVIALPQTL Trigger: CAAAGTCTGAGGCAGCGCAATAACACTGTAGTCCAAATGGCGCACTGTGCACGTCATCTGCATCCCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATGTTGGAGCTCGTTTCTaGCAGCGCCTTCCTGGCCCA | + |
Preference number: 4 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDVGARF*QRLPGP Trigger: TGGGCCAGGAAGGCGCTGTCAGAAACGAGCTCCAAC...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGTCTTCATGTCCACGATaGCCTCGGTCTGTGCCACAG | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFESSCPR*PRSVPQ Trigger: CTGTGGCACAGACCGAGGTCATCGTGGACATGAAGA...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAAATAACCAGGACTCCTaGAATGCAGCAGAGACCACC | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSENNQDS*NAAETT Trigger: GGTGGTCTCTGCTGCATTGCAGGAGTCCTGGTTATT...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCTCCACAGGACTTCGTaGTTAAGGCCCCCTACGTTG | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFELHRTS*LRPPTL Trigger: CAACGTAGGGGGCCTTAACCACGAAGTCCTGTGGAG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAATTCCTGGGAGGTCCGTaGGGAACTTCATCTGCAAAT | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEFLGGP*GTSSAN Trigger: ATTTGCAGATGAAGTTCCCCACGGACCTCCCAGGAA...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGGTGCTCATCTGTTCCTaGGAGGTCCGTGGGGAACTT | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEVLICS*EVRGEL Trigger: AAGTTCCCCACGGACCTCCCAGGAACAGATGAGCAC...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGCCACTGCAGCCTCCCTaGCAGCAGGCCCCTTATCTC | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLREPLQPP*QQAPYL Trigger: GAGATAAGGGGCCTGCTGCCAGGGAGGCTGCAGTGG...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGGGTCTGTGGTGCACTaGCTCTGTTTTCCTGAAAGT | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEGSVVH*LCFPES Trigger: ACTTTCAGGAAAACAGAGCCAGTGCACCACAGACCC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGTTACTGGCAGTGGCCTaGCTGTGCTGGGCGGGGTCT | + |
Preference number: 4 (lower is better) Translates to: CAASDFVDLMLNKQITAVLLAVA*LCWAGS Trigger: AGACCCCGCCCAGCACAGCCAGGCCACTGCCAGTAA...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAATCTTGCCTACAGTTGTaGTCTGTGTTCTGGGGAGAG | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSESCLQL*SVFWGE Trigger: CTCTCCCCAGAACACAGACCACAACTGTAGGCAAGA...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGGGATTCGGGTGGGAATaGGGCTGTGTCTTGGTGATT | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEGFGWE*GCVLVI Trigger: AATCACCAAGACACAGCCTCATTCCCACCCGAATCC...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCTCTTCATGTCCACGATaGCCTCGGTCTGTGCCACAG | + |
Preference number: 4 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFSSCPR*PRSVPQ Trigger: CTGTGGCACAGACCGAGGTCATCGTGGACATGAAGA...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAATTGCTTGTCTGGTCTTaGCCTTTGGAGGTCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSELLVWS*PLEVQE Trigger: TTCTTGGACCTCCAAAGGTCAAGACCAGACAAGCAA...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATTCACGAGTGGGACAGTaGCCTGTGTCTCCTGGGTTG | + |
Preference number: 4 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDSRVGQ*PVSPGL Trigger: CAACCCAGGAGACACAGGTCACTGTCCCACTCGTGA...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGGGTAGCCCACCAAAATaGTGCAGGGATACTGGTGAA | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEGSPPK*CRDTGE Trigger: TTCACCAGTATCCCTGCATCATTTTGGTGGGCTACC...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGGGTAGATCTCATCGATaGCCCAATAATCCAGCTCTT | + |
Preference number: 4 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVGRSHR*PNNPAL Trigger: AAGAGCTGGATTATTGGGGCATCGATGAGATCTACC...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR GCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAAACTCGTCGTTTTCTTaGAGCTCTGGAAGTGTGTTG | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSENSSFS*SSGSVL Trigger: CAACACACTTCCAGAGCTGCAAGAAAACGACGAGTT...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTGTGCCACAGCCAGCTaGTCCTGTGGGCAGATCACC | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSCATAS*SCGQIT Trigger: GGTGATCTGCCCACAGGAGCAGCTGGCTGTGGCACA...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGATGGTTACATAGTATaGCAAGATGGCCAGAAGGTC | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEDGYIV*QDGQKV Trigger: GACCTTCTGGCCATCTTGCCATACTATGTAACCATC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAATCGTGGGAGTCATTTTaGCTAACCTCCTGGTACTTA | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSESWESF*LTSWYL Trigger: TAAGTACCAGGAGGTTAGCCAAAATGACTCCCACGA...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCACCACTGCAGCCTCCCTaGCAGCAGGCCCCTTATCTC | + |
Preference number: 4 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPPLQPP*QQAPYL Trigger: GAGATAAGGGGCCTGCTGCCAGGGAGGCTGCAGTGG...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
CDS-3UTR CCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGGTCAGCTGTGGTTACTaGCAGTGGCCTGGCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLREVSCGY*QWPGCA Trigger: AGCACAGCCAGGCCACTGCCAGTAACCACAGCTGAC...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCGGAGAAACCTTTGGATaGTCCCTGACAGTGTGCCGA | + |
Preference number: 4 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFGETFG*SLTVCR Trigger: TCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCC...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CAA 72 bp | GCAGATGGACAGAATCTGCACTGCTCAGACCAGCATTaGGCTTTTGCCAAAGCAGTAGGTGGTGTTGGCTTA | + |
Preference number: 4 (lower is better) Translates to: ADGQNLHCSDQH*AFAKAVGGVGL Trigger: TAAGCCAACACCACCTACTGCTTTGGCAAAAGCCAAATGCTGGTCTGAGCAGTGCAGATTCTGTCCATCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
CDS-3UTR TCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCGGTAGCCCACCAAAATaGTGCAGGGATACTGGTGAA | + |
Preference number: 4 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFGSPPK*CRDTGE Trigger: TTCACCAGTATCCCTGCATCATTTTGGTGGGCTACC...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
CDS-3UTR TCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCGGGTGGTGGCAGGGGTaGTCTCTCAGTCTCTGTGAA | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSGWWQG*SLSLCE Trigger: TTCACAGAGACTGAGAGATCACCCCTGCCACCACCC...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR TCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCGACTACTGTCCTTTTTaGCTTCACCCACAGCCTGGT | + |
Preference number: 4 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFDYCPF*LHPQPG Trigger: ACCAGGCTGTGGGTGAAGTCAAAAAGGACAGTAGTC...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
CDS-3UTR GCA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAGCCCTGGCTCTTTGGTaGTCATCTGTTCCTGGGAGG | + |
Preference number: 4 (lower is better) Translates to: VEQLYRLLHAEKSADWCRALALW*SSVPGR Trigger: CCTCCCAGGAACAGATGAGCACCAAAGAGCCAGGGC...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
CDS-3UTR GCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCGCCCTGGCTCTTTGGTaGTCATCTGTTCCTGGGAGG | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSALALW*SSVPGR Trigger: CCTCCCAGGAACAGATGAGCACCAAAGAGCCAGGGC...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAGAGAAAGTGTTGACCTaGATGTCTTTCTGTTCAAGC | + |
Preference number: 4 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEEKVLT*MSFCSS Trigger: GCTTGAACAGAAAGACATCCAGGTCAACACTTTCTC...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCATCTACTGAGTCCTTaGTATTGGCTGACTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEHLLSP*YWLTLQ Trigger: CTGGAGAGTCAGCCAATACCAAGGACTCAGTAGATG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGAGCATCTCCAGCTTCTaGGCACTCAGATGCTGTGGG | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQSISSF*ALRCCG Trigger: CCCACAGCATCTGAGTGCCCAGAAGCTGGAGATGCT...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGGTGCTCATCTGTTCCTaGGAGGTCCGTGGGGAACTT | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQVLICS*EVRGEL Trigger: AAGTTCCCCACGGACCTCCCAGGAACAGATGAGCAC...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCGCGGAAAGTCAGCTGTaGTTACTGGCAGTGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSAESQL*LLAVAW Trigger: CCAGGCCACTGCCAGTAACCACAGCTGACTTTCCGC...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCAAGGGAGGCTGTCCCTaGGGGAGGGCTTCTTCTAGA | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSKGGCP*GRASSR Trigger: TCTAGAAGAAGCCCTCCCCCAGGGACAGCCTCCCTT...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGGTGACCTGTGTCTCCTaGGTTGGAATGAATTTCTGG | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEVTCVS*VGMNFW Trigger: CCAGAAATTCATTCCAACCCAGGAGACACAGGTCAC...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR CAA 72 bp | ATTGTACTTTACAAAGGCAAGTGGAGGACATGGCTGTaGAAACCATGGGAAGTATGCAGCCCAGCCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: IVLYKGKWRTWL*KPWEVCSPAQC Trigger: ACACTGGGCTGGGCTGCATACTTCCCATGGTTTCAACAGCCATGTCCTCCACTTGCCTTTGTAAAGTACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | ATCATCATCATGTTGTCAGTGGGTCCCTCCATCTCTTaGTCAGTAGGTCCCACTGCAGATGGACAGAATCTG | + |
Preference number: 4 (lower is better) Translates to: IIIMLSVGPSIS*SVGPTADGQNL Trigger: CAGATTCTGTCCATCTGCAGTGGGACCTACTGACAAAGAGATGGAGGGACCCACTGACAACATGATGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | CCAACCACCTTTTCTGGGCAAATAGAATCCCATCCTTaGCGGAATACATGGAATCGGGAGGCAATAGTGGCA | + |
Preference number: 4 (lower is better) Translates to: PTTFSGQIESHP*RNTWNREAIVA Trigger: TGCCACTATTGCCTCCCGATTCCATGTATTCCGCAAAGGATGGGATTCTATTTGCCCAGAAAAGGTGGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | GTTATTGCTAATGGTGCGTTTGTTTCTGCTTTTGACTaGGTACCTGTGCACTCTAAGCAGGTAGGCCCTGGG | + |
Preference number: 4 (lower is better) Translates to: VIANGAFVSAFD*VPVHSKQVGPG Trigger: CCCAGGGCCTACCTGCTTAGAGTGCACAGGTACCAAGTCAAAAGCAGAAACAAACGCACCATTAGCAATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCAAGACTGCAGGCCCGTTaGGTGTCTGGCGAGTTTCAG | + |
Preference number: 4 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPRLQAR*VSGEFQ Trigger: CTGAAACTCGCCAGACACTCAACGGGCCTGCAGTCT...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGAACTTCATCTGCAAATaGGAGGCAGAGGGTGGTGGC | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQNFICK*EAEGGG Trigger: GCCACCACCCTCTGCCTCTCATTTGCAGATGAAGTT...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCTCACGAGTGGGACAGTaGCCTGTGTCTCCTGGGTTG | + |
Preference number: 4 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLSRVGQ*PVSPGL Trigger: CAACCCAGGAGACACAGGTCACTGTCCCACTCGTGA...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGTGTAAGGAATGGAGGTaGCCTGGCTCTTTGGTGCTC | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQCKEWR*PGSLVL Trigger: GAGCACCAAAGAGCCAGGGCACCTCCATTCCTTACA...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGAGAATGGTACTCATGTaGTGGGGAGTGGTGAGCGGA | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRERMVLM*WGVVSG Trigger: TCCGCTCACCACTCCCCAGCACATGAGTACCATTCT...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGTCTCGTAAGATTTGTTaGAGCTCGTTTCTGACAGCG | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFESRKIC*SSFLTA Trigger: CGCTGTCAGAAACGAGCTCCAACAAATCTTACGAGA...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGCTGTTCTTGGCAGTCTaGATTCGGGTGGGAATGAGG | + |
Preference number: 4 (lower is better) Translates to: CAASDFVDLMLNKQITAVLFLAV*IRVGMR Trigger: CCTCATTCCCACCCGAATCCAGACTGCCAAGAACAG...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGCTGTTCTTGGCAGTCTaGATTCGGGTGGGAATGAGG | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRELFLAV*IRVGMR Trigger: CCTCATTCCCACCCGAATCCAGACTGCCAAGAACAG...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | TGGAGAGTCAGGAGGGGAATTAAAAGCCAGAGGAGGCAGAATCTGAGAAATGATCTCCTCATACACACATaGCCTCTCAGGCTGTTCTTG | + |
Preference number: 4 (lower is better) Translates to: WRVRRGIKSQRRQNLRNDLLIHT*PLRLFL Trigger: CAAGAACAGCCTGAGAGGCCATGTGTGTATGAGGAG...ATCATTTCTCAGATTCTGCCTCCTCTGGCTTTTAATTCCCCTCCTGACTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCGGAATGGAGGTGCCCTaGCTCTTTGGTGCTCATCTG | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSGMEVP*LFGAHL Trigger: CAGATGAGCACCAAAGAGCCAGGGCACCTCCATTCC...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCTTCTTCTAGAAGAATaGTACTCATGTGCTGGGGAG | + |
Preference number: 4 (lower is better) Translates to: VAVKEVPVSQKWRVHMFELLLEE*YSCAGE Trigger: CTCCCCAGCACATGAGTACCATTCTTCTAGAAGAAG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGTTGTGGTCTGTGTTCTaGGGAGAGGAGGAACCCACA | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRELWSVF*GEEEPT Trigger: TGTGGGTTCCTCCTCTCCCCAGAACACAGACCACAA...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGCGGCTTGGAGACAGGTaGTTATCATCTACTGAGTCC | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRERLGDR*LSSTES Trigger: GGACTCAGTAGATGATAATCACCTGTCTCCAAGCCG...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCATCTCTCAGTCTCTGTaGAGTCCGTGGCACAGCTGG | + |
Preference number: 4 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLISQSL*SPWHSW Trigger: CCAGCTGTGCCACGGACTTCACAGAGACTGAGAGAT...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGTGTGCTGGGGAGTGGTaGGCGGAAAGTCAGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: QDTQNGLRRGYNFATGSLCAGEW*AESQLW Trigger: CCACAGCTGACTTTCCGCTCACCACTCCCCAGCACA...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGGACTACTGTCCTTTTTaGCTTCACCCACAGCCTGGT | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLREDYCPF*LHPQPG Trigger: ACCAGGCTGTGGGTGAAGTCAAAAAGGACAGTAGTC...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTTGTGCCACAGCCAGCTaGTCCTGTGGGCAGATCACC | + |
Preference number: 4 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPCATAS*SCGQIT Trigger: GGTGATCTGCCCACAGGAGCAGCTGGCTGTGGCACA...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR GCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTGATGACCTCGGTCTGTaGCACAGCCAGCTGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPDDLGL*HSQLLL Trigger: CAGGAGCAGCTGGCTGTGGCACAGACCGAGGTCATC...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCTGCTGCCATTTCTTTTaGCTCTTTCAAGAGCCTCTC | + |
Preference number: 4 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFCCHFF*LFQEPL Trigger: GAGAGGCTCTTGAAAGAGCCAAAAGAAATGGCAGCA...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGCTGAGTCCTTGGTATTaGCTGACTCTCCAGCCTTCT | + |
Preference number: 4 (lower is better) Translates to: CAASDFVDLMLNKQITAVLSPWY*LTLQPS Trigger: AGAAGGCTGGAGAGTCAGCCAATACCAAGGACTCAG...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGCTGAGTCCTTGGTATTaGCTGACTCTCCAGCCTTCT | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRELSPWY*LTLQPS Trigger: AGAAGGCTGGAGAGTCAGCCAATACCAAGGACTCAG...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGCCACTTCCACCGGCTTaGAGACAGGTGATTATCATC | + |
Preference number: 4 (lower is better) Translates to: CAASDFVDLMLNKQITAVPLPPA*RQVIII Trigger: GATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGG...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGCCACTTCCACCGGCTTaGAGACAGGTGATTATCATC | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLREPLPPA*RQVIII Trigger: GATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGG...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGTCTTGCCTACAGTTGTaGTCTGTGTTCTGGGGAGAG | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQSCLQL*SVFWGE Trigger: CTCTCCCCAGAACACAGACCACAACTGTAGGCAAGA...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR CAA 72 bp | CTGAATCTGTCCTTGTCAGGGAAGAGAACTGAACCCTaGTGTGGTTGGCATGGAAGAGGGAGATATTCATCT | + |
Preference number: 4 (lower is better) Translates to: LNLSLSGKRTEP*CGWHGRGRYSS Trigger: AGATGAATATCTCCCTCTTCCATGCCAACCACACAAGGGTTCAGTTCTCTTCCCTGACAAGGACAGATTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
3UTR CAA 72 bp | GTTAGTTTTCTAGTGTTGGGGTTTGATCCCACAGCCTaGCATGCACAAGGCAAGTGCTTCAACACCAAGTGT | + |
Preference number: 4 (lower is better) Translates to: VSFLVLGFDPTA*HAQGKCFNTKC Trigger: ACACTTGGTGTTGAAGCACTTGCCTTGTGCATGCAAGGCTGTGGGATCAAACCCCAACACTAGAAAACTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
||
CDS-3UTR TCA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGAGACTGCAGGCCCGTTaGGTGTCTGGCGAGTTTCAG | + |
Preference number: 4 (lower is better) Translates to: QDTQNGLRRGYNFATGSLRLQAR*VSGEFQ Trigger: CTGAAACTCGCCAGACACTCAACGGGCCTGCAGTCT...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGTTGCTTGTCTGGTCTTaGCCTTTGGAGGTCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRELLVWS*PLEVQE Trigger: TTCTTGGACCTCCAAAGGTCAAGACCAGACAAGCAA...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR TCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGTCTCCTGGGTTGGAATaGATTTCTGGGGCAAACAAG | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRESPGLE*ISGANK Trigger: CTTGTTTGCCCCAGAAATTCATTCCAACCCAGGAGA...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTCTGGCACTGTCAGGTTaGAAGGGACCATGGGAAGCC | + |
Preference number: 4 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPLALSG*KGPWEA Trigger: GGCTTCCCATGGTCCCTTGCAACCTGACAGTGCCAG...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCAAGCATCTCCAGCTTCTaGGCACTCAGATGCTGTGGG | + |
Preference number: 4 (lower is better) Translates to: IQSGKMDYYIECFQGDDASISSF*ALRCCG Trigger: CCCACAGCATCTGAGTGCCCAGAAGCTGGAGATGCT...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCCTCCTCATACACACATaGCCTCTCAGGCTGTTCTTG | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSLLIHT*PLRLFL Trigger: CAAGAACAGCCTGAGAGGCCATGTGTGTATGAGGAG...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGTCTGGTCTTGACCTTTaGAGGTCCAAGAAGTCTTCG | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQSGLDL*RSKKSS Trigger: CGAAGACTTCTTGGACCTCCAAAGGTCAAGACCAGA...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGCTCTTAAAGAGTCTCTaGCATCGCCAGGCTTATCTG | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRELLKSL*HRQAYL Trigger: CAGATAAGCCTGGCGATGCCAGAGACTCTTTAAGAG...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGCTCTTAAAGAGTCTCTaGCATCGCCAGGCTTATCTG | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQLLKSL*HRQAYL Trigger: CAGATAAGCCTGGCGATGCCAGAGACTCTTTAAGAG...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR CCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGGTGACCTGTGTCTCCTaGGTTGGAATGAATTTCTGG | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQVTCVS*VGMNFW Trigger: CCAGAAATTCATTCCAACCCAGGAGACACAGGTCAC...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR TCA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGCTGGCTCTGTTTTCCTaGAAGTTCACTTTGAGGGAT | + |
Preference number: 4 (lower is better) Translates to: EMKGAKMSDMAEHRFLRELALFS*KFTLRD Trigger: ATCCCTCAAAGTGAACTTTCAGGAAAACAGAGCCAG...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
||
CDS-3UTR GCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGGGTAGATCTCATCGATaGCCCAATAATCCAGCTCTT | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQGRSHR*PNNPAL Trigger: AAGAGCTGGATTATTGGGGCATCGATGAGATCTACC...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGTGCTGCCATTTCTTTTaGCTCTTTCAAGAGCCTCTC | + |
Preference number: 4 (lower is better) Translates to: LRRGYNFATGSLDSSFRQCCHFF*LFQEPL Trigger: GAGAGGCTCTTGAAAGAGCCAAAAGAAATGGCAGCA...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCTTCCTGGGAGGTCCGTaGGGAACTTCATCTGCAAAT | + |
Preference number: 4 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLFLGGP*GTSSAN Trigger: ATTTGCAGATGAAGTTCCCCACGGACCTCCCAGGAA...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTCTGGTCTTGACCTTTaGAGGTCCAAGAAGTCTTCG | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSSGLDL*RSKKSS Trigger: CGAAGACTTCTTGGACCTCCAAAGGTCAAGACCAGA...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR CAA 72 bp | AGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTaGAGGCACATTTACATCCAGGCCTATTTACAAAGT | + |
Preference number: 4 (lower is better) Translates to: RYLCLRNGVSTC*RHIYIQAYLQS Trigger: ACTTTGTAAATAGGCCTGGATGTAAATGTGCCTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR CAA 72 bp | TCCCTGAACTATATACACACATGCACGAAATGCATTTaGCTGCCGCAAAACCTGAGCATTGCCAGGAAACTA | + |
Preference number: 4 (lower is better) Translates to: SLNYIHTCTKCI*LPQNLSIARKL Trigger: TAGTTTCCTGGCAATGCTCAGGTTTTGCGGCAGCAAAATGCATTTCGTGCATGTGTGTATATAGTTCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | TTCTTCATCAGGACAGTGTCTCTTTGGCCTCTAAACTaGCTGATACCCCCTTCTGGCTTTAGTTGTTATTGC | + |
Preference number: 4 (lower is better) Translates to: FFIRTVSLWPLN*LIPPSGFSCYC Trigger: GCAATAACAACTAAAGCCAGAAGGGGGTATCAGCAAGTTTAGAGGCCAAAGAGACACTGTCCTGATGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCTCTCCTGGGTTGGAATaGATTTCTGGGGCAAACAAG | + |
Preference number: 4 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLSPGLE*ISGANK Trigger: CTTGTTTGCCCCAGAAATTCATTCCAACCCAGGAGA...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR GCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTTGTAAGGAATGGAGGTaGCCTGGCTCTTTGGTGCTC | + |
Preference number: 4 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPCKEWR*PGSLVL Trigger: GAGCACCAAAGAGCCAGGGCACCTCCATTCCTTACA...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR GCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTAGAATGGTACTCATGTaGTGGGGAGTGGTGAGCGGA | + |
Preference number: 4 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPRMVLM*WGVVSG Trigger: TCCGCTCACCACTCCCCAGCACATGAGTACCATTCT...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR GCA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGAAAGGAAACAGTTTTTaGTTGGGAAATCGTGGGGAG | + |
Preference number: 4 (lower is better) Translates to: CAASDFVDLMLNKQITAVKGNSF*LGNRGE Trigger: CTCCCCACGATTTCCCAAGCAAAAACTGTTTCCTTT...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCGTTTTCTTGCAGCTCTaGAAGTGTGTTGAGAGACAG | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSVFLQL*KCVERQ Trigger: CTGTCTCTCAACACACTTCCAGAGCTGCAAGAAAAC...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCCTTCTTCTAGAAGAATaGTACTCATGTGCTGGGGAG | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSLLLEE*YSCAGE Trigger: CTCCCCAGCACATGAGTACCATTCTTCTAGAAGAAG...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTTTGTGGTCTGTGTTCTaGGGAGAGGAGGAACCCACA | + |
Preference number: 4 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPLWSVF*GEEEPT Trigger: TGTGGGTTCCTCCTCTCCCCAGAACACAGACCACAA...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | CATGTTAATGATGGTGGTGAAGAAGGATTCATGGGATaGTACTTTACAAAGGCAAGTGGAGGACATGGCTGT | + |
Preference number: 4 (lower is better) Translates to: HVNDGGEEGFMG*YFTKASGGHGC Trigger: ACAGCCATGTCCTCCACTTGCCTTTGTAAAGTACAATCCCATGAATCCTTCTTCACCACCATCATTAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCGAGGCTGTGTCTTGGTaGTTTCATTGTATAGCATCT | + |
Preference number: 4 (lower is better) Translates to: QNGLRRGYNFATGSLDSSEAVSW*FHCIAS Trigger: AGATGCTATACAATGAAATCACCAAGACACAGCCTC...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAGAGAAAGTGTTGACCTaGATGTCTTTCTGTTCAAGC | + |
Preference number: 4 (lower is better) Translates to: VEQLYRLLHAEKSADWCREKVLT*MSFCSS Trigger: GCTTGAACAGAAAGACATCCAGGTCAACACTTTCTC...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCGTTTTCTTGCAGCTCTaGAAGTGTGTTGAGAGACAG | + |
Preference number: 4 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLVFLQL*KCVERQ Trigger: CTGTCTCTCAACACACTTCCAGAGCTGCAAGAAAAC...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR CAA 72 bp | GCTCTTATCTTTGAAATTAAAAACGTCTTGGGCAATTaGCACTGGTTAAGAGGCCCAGCAGAAACAGCTTTG | + |
Preference number: 4 (lower is better) Translates to: ALIFEIKNVLGN*HWLRGPAETAL Trigger: CAAAGCTGTTTCTGCTGGGCCTCTTAACCAGTGCAAATTGCCCAAGACGTTTTTAATTTCAAAGATAAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | TGGAGTCTTCTCTTGAGAGAAAGGCCATGTATGCTATaGACAGAATTCTCAACTGGCAAACATAAGTGCCTA | + |
Preference number: 4 (lower is better) Translates to: WSLLLRERPCML*TEFSTGKHKCL Trigger: TAGGCACTTATGTTTGCCAGTTGAGAATTCTGTCAATAGCATACATGGCCTTTCTCTCAAGAGAAGACTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR TCA 90 bp | TTAAACAATACACTTTGTAGTTTGTGCTGGCAGTTTCCCCATTTCCCTGAACTACTGGCTCTGTTTTCCTaGAAGTTCACTTTGAGGGAT | + |
Preference number: 4 (lower is better) Translates to: LNNTLCSLCWQFPHFPELLALFS*KFTLRD Trigger: ATCCCTCAAAGTGAACTTTCAGGAAAACAGAGCCAG...TAGTTCAGGGAAATGGGGAAACTGCCAGCACAAACTACAAAGTGTATTGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR GCA 90 bp | TTAAACAATACACTTTGTAGTTTGTGCTGGCAGTTTCCCCATTTCCCTGAACTAAACTCGTCGTTTTCTTaGAGCTCTGGAAGTGTGTTG | + |
Preference number: 4 (lower is better) Translates to: LNNTLCSLCWQFPHFPELNSSFS*SSGSVL Trigger: CAACACACTTCCAGAGCTGCAAGAAAACGACGAGTT...TAGTTCAGGGAAATGGGGAAACTGCCAGCACAAACTACAAAGTGTATTGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR GCA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCAAAGGAAACAGTTTTTaGTTGGGAAATCGTGGGGAG | + |
Preference number: 4 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLKGNSF*LGNRGE Trigger: CTCCCCACGATTTCCCAAGCAAAAACTGTTTCCTTT...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | TTAAACAATACACTTTGTAGTTTGTGCTGGCAGTTTCCCCATTTCCCTGAACTAGATGGTTACATAGTATaGCAAGATGGCCAGAAGGTC | + |
Preference number: 4 (lower is better) Translates to: LNNTLCSLCWQFPHFPELDGYIV*QDGQKV Trigger: GACCTTCTGGCCATCTTGCCATACTATGTAACCATC...TAGTTCAGGGAAATGGGGAAACTGCCAGCACAAACTACAAAGTGTATTGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | ATTTTGCTAATGGCACCTCATGTTTGCTTAATAGATACTTTCCATGTGTTCCCTCATCTACTGAGTCCTTaGTATTGGCTGACTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: ILLMAPHVCLIDTFHVFPHLLSP*YWLTLQ Trigger: CTGGAGAGTCAGCCAATACCAAGGACTCAGTAGATG...AGGGAACACATGGAAAGTATCTATTAAGCAAACATGAGGTGCCATTAGCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCAGAAACAGTTTTTGCTTaGGAAATCGTGGGGAGAAAC | + |
Preference number: 4 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPETVFA*EIVGRN Trigger: GTTTCTCCCCACGATTTCCCAAGCAAAAACTGTTTC...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGTCTCGTAAGATTTGTTaGAGCTCGTTTCTGACAGCG | + |
Preference number: 4 (lower is better) Translates to: QDTQNGLRRGYNFATGSLSRKIC*SSFLTA Trigger: CGCTGTCAGAAACGAGCTCCAACAAATCTTACGAGA...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGTCGTGGGAGTCATTTTaGCTAACCTCCTGGTACTTA | + |
Preference number: 4 (lower is better) Translates to: QDTQNGLRRGYNFATGSLSWESF*LTSWYL Trigger: TAAGTACCAGGAGGTTAGCCAAAATGACTCCCACGA...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | ATTCAAAGCGGGAAAATGGACTACTATATTGAATGTTTCCAAGGTGACGATGCATTGTTCAGATGTTCGTaGGAGTCATTTTGGCTAACC | + |
Preference number: 4 (lower is better) Translates to: IQSGKMDYYIECFQGDDALFRCS*ESFWLT Trigger: GGTTAGCCAAAATGACTCCCACGAACATCTGAACAA...TGCATCGTCACCTTGGAAACATTCAATATAGTAGTCCATTTTCCCGCTTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | AATTTGCACTGGTTAAGAGGCCCAGCAGAAACAGCTTaGCCATTAGAAGGATCATGTAATTTTGAAGCCATT | + |
Preference number: 4 (lower is better) Translates to: NLHWLRGPAETA*PLEGSCNFEAI Trigger: AATGGCTTCAAAATTACATGATCCTTCTAATGGCAAAGCTGTTTCTGCTGGGCCTCTTAACCAGTGCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | CGTGATTACATGGGAAGACAGGAGAGGATCACTTGTTaGGAAACTCTTAAAATACAGGTTGTGCTTCTTCTT | + |
Preference number: 4 (lower is better) Translates to: RDYMGRQERITC*ETLKIQVVLLL Trigger: AAGAAGAAGCACAACCTGTATTTTAAGAGTTTCCAAACAAGTGATCCTCTCCTGTCTTCCCATGTAATCACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CCA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGTTGTTCAGATGTTCGTaGGAGTCATTTTGGCTAACC | + |
Preference number: 4 (lower is better) Translates to: QDTQNGLRRGYNFATGSLLFRCS*ESFWLT Trigger: GGTTAGCCAAAATGACTCCCACGAACATCTGAACAA...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CCA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGAAACAGTTTTTGCTTaGGAAATCGTGGGGAGAAAC | + |
Preference number: 4 (lower is better) Translates to: QDTQNGLRRGYNFATGSLETVFA*EIVGRN Trigger: GTTTCTCCCCACGATTTCCCAAGCAAAAACTGTTTC...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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3UTR CAA 72 bp | ATTGTCAGAATTCTGTGTCTTCATTCTGAAAGGCTGTaGTTCTGCCTTGTTATGCGACCTCAAATCCATTTT | + |
Preference number: 4 (lower is better) Translates to: IVRILCLHSERL*FCLVMRPQIHF Trigger: AAAATGGATTTGAGGTCGCATAACAAGGCAGAACAACAGCCTTTCAGAATGAAGACACAGAATTCTGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | CACTTTGACATGAACAAGTATTCTGATGTTGAACAATaGTACAGACTACTACATGCAGAGAAGTCTGCTGAT | + |
Preference number: 4 (lower is better) Translates to: HFDMNKYSDVEQ*YRLLHAEKSAD Trigger: ATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAACATCAGAATACTTGTTCATGTCAAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | AGCCATTCAAATAATCTTTCTCATTGGAATTTATCCTaGGTCACTGAGCTAGCTAATGGTGAAATGAACTCT | + |
Preference number: 4 (lower is better) Translates to: SHSNNLSHWNLS*VTELANGEMNS Trigger: AGAGTTCATTTCACCATTAGCTAGCTCAGTGACCAAGGATAAATTCCAATGAGAAAGATTATTTGAATGGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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3UTR CAA 72 bp | CATTTGAGATGGTTATCTTGGGAAATATTAATGAATTaGGTCCCATATTCCTCAACAACCCAGCTATTTCCT | + |
Preference number: 4 (lower is better) Translates to: HLRWLSWEILMN*VPYSSTTQLFP Trigger: AGGAAATAGCTGGGTTGTTGAGGAATATGGGACCAAATTCATTAATATTTCCCAAGATAACCATCTCAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS GCA 90 bp | CTTGGGAAATCGTGGGGAGAAACCTTTGGATGGTCCCTGACAGTGTaGCGAATCATCAGCCTCCAGCAAGGGAGGCTGTCCCTGGGGGAG | + |
Preference number: 5 (lower is better) Translates to: LGKSWGETFGWSLTV*RIISLQQGRLSLGE Trigger: CTCCCCCAGGGACAGCCTCCCTTGCTGGAGGCTGATGATTCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCCCCACGATTTCCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | GGGGAGAGGAGGAACCCACACAGCCCTCTTCTCTTAAAGAGTCTCTaGCATCGCCAGGCTTATCTGCTAGGCAGTTGGGGCTGGGATCTG | + |
Preference number: 5 (lower is better) Translates to: GERRNPHSPLLLKSL*HRQAYLLGSWGWDL Trigger: CAGATCCCAGCCCCAACTGCCTAGCAGATAAGCCTGGCGATGCCAGAGACTCTTTAAGAGAAGAGGGCTGTGTGGGTTCCTCCTCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 90 bp | GGAGGGCTTCTTCTAGAAGAATGGTACTCATGTGCTGGGGAGTGGTaGGCGGAAAGTCAGCTGTGGTTACTGGCAGTGGCCTGGCTGTGC | + |
Preference number: 5 (lower is better) Translates to: GGLLLEEWYSCAGEW*AESQLWLLAVAWLC Trigger: GCACAGCCAGGCCACTGCCAGTAACCACAGCTGACTTTCCGCTCACCACTCCCCAGCACATGAGTACCATTCTTCTAGAAGAAGCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 90 bp | GTCAATGCTGGAGGTGCTCTTCATGTCCACGATGACCTCGGTCTGTaGCACAGCCAGCTGCTCCTGTGGGCAGATCACCTCTTCCATTTC | + |
Preference number: 5 (lower is better) Translates to: VNAGGALHVHDDLGL*HSQLLLWADHLFHF Trigger: GAAATGGAAGAGGTGATCTGCCCACAGGAGCAGCTGGCTGTGGCACAGACCGAGGTCATCGTGGACATGAAGAGCACCTCCAGCATTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 90 bp | GGCTGTCCCTGGGGGAGGGCTTCTTCTAGAAGAATGGTACTCATGTaGTGGGGAGTGGTGAGCGGAAAGTCAGCTGTGGTTACTGGCAGT | + |
Preference number: 5 (lower is better) Translates to: GCPWGRASSRRMVLM*WGVVSGKSAVVTGS Trigger: ACTGCCAGTAACCACAGCTGACTTTCCGCTCACCACTCCCCAGCACATGAGTACCATTCTTCTAGAAGAAGCCCTCCCCCAGGGACAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | TGTCCCTGGGGGAGGGCTTCTTCTAGAAGAATGGTACTCATGTGCTaGGGAGTGGTGAGCGGAAAGTCAGCTGTGGTTACTGGCAGTGGC | + |
Preference number: 5 (lower is better) Translates to: CPWGRASSRRMVLMC*GVVSGKSAVVTGSG Trigger: GCCACTGCCAGTAACCACAGCTGACTTTCCGCTCACCACTCCCCAGCACATGAGTACCATTCTTCTAGAAGAAGCCCTCCCCCAGGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 90 bp | TCTGACAGCGCCTTCCTGGCCCACTTCCACCGGCTTGGAGACAGGTaGTTATCATCTACTGAGTCCTTGGTATTGGCTGACTCTCCAGCC | + |
Preference number: 5 (lower is better) Translates to: SDSAFLAHFHRLGDR*LSSTESLVLADSPA Trigger: GGCTGGAGAGTCAGCCAATACCAAGGACTCAGTAGATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | TGTAAGGAATGGAGGTGCCCTGGCTCTTTGGTGCTCATCTGTTCCTaGGAGGTCCGTGGGGAACTTCATCTGCAAATGAGAGGCAGAGGG | + |
Preference number: 5 (lower is better) Translates to: CKEWRCPGSLVLICS*EVRGELHLQMRGRG Trigger: CCCTCTGCCTCTCATTTGCAGATGAAGTTCCCCACGGACCTCCCAGGAACAGATGAGCACCAAAGAGCCAGGGCACCTCCATTCCTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 90 bp | AGTTTTTGCTTGGGAAATCGTGGGGAGAAACCTTTGGATGGTCCCTaGCAGTGTGCCGAATCATCAGCCTCCAGCAAGGGAGGCTGTCCC | + |
Preference number: 5 (lower is better) Translates to: SFCLGNRGEKPLDGP*QCAESSASSKGGCP Trigger: GGGACAGCCTCCCTTGCTGGAGGCTGATGATTCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCCCCACGATTTCCCAAGCAAAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 90 bp | GCATCGCCAGGCTTATCTGCTAGGCAGTTGGGGCTGGGATCTGCTTaGTTGTCTGGTCTTGACCTTTGGAGGTCCAAGAAGTCTTCGTCT | + |
Preference number: 5 (lower is better) Translates to: ASPGLSARQLGLGSA*LSGLDLWRSKKSSS Trigger: AGACGAAGACTTCTTGGACCTCCAAAGGTCAAGACCAGACAAGCAAGCAGATCCCAGCCCCAACTGCCTAGCAGATAAGCCTGGCGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | CCCTTATCTCTGCTTAGTGTAAGGAATGGAGGTGCCCTGGCTCTTTaGTGCTCATCTGTTCCTGGGAGGTCCGTGGGGAACTTCATCTGC | + |
Preference number: 5 (lower is better) Translates to: PLSLLSVRNGGALAL*CSSVPGRSVGNFIC Trigger: GCAGATGAAGTTCCCCACGGACCTCCCAGGAACAGATGAGCACCAAAGAGCCAGGGCACCTCCATTCCTTACACTAAGCAGAGATAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | AAGAGTCTCTGGCATCGCCAGGCTTATCTGCTAGGCAGTTGGGGCTaGGATCTGCTTGCTTGTCTGGTCTTGACCTTTGGAGGTCCAAGA | + |
Preference number: 5 (lower is better) Translates to: KSLWHRQAYLLGSWG*DLLACLVLTFGGPR Trigger: TCTTGGACCTCCAAAGGTCAAGACCAGACAAGCAAGCAGATCCCAGCCCCAACTGCCTAGCAGATAAGCCTGGCGATGCCAGAGACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAATTATCTGCTAGGCAGTaGGGGCTGGGATCTGCTTGC | + |
Preference number: 5 (lower is better) Translates to: VWTAPSGSSCEGGTCVSELSARQ*GLGSAC Trigger: GCAAGCAGATCCCAGCCCCAACTGCCTAGCAGATAA...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 90 bp | AACCTCCTGGTACTTATTCTCGTAAGATTTGTTGGAGCTCGTTTCTaGCAGCGCCTTCCTGGCCCACTTCCACCGGCTTGGAGACAGGTG | + |
Preference number: 5 (lower is better) Translates to: NLLVLILVRFVGARF*QRLPGPLPPAWRQV Trigger: CACCTGTCTCCAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAGAAACGAGCTCCAACAAATCTTACGAGAATAAGTACCAGGAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | AGGCAATGCACACAGCCTCTACGTGTGCCAACTTCCGGTTGTCACTaGGTTGCCCAAACTCGTCGTTTTCTTGCAGCTCTGGAAGTGTGT | + |
Preference number: 5 (lower is better) Translates to: RQCTQPLRVPTSGCH*VAQTRRFLAALEVC Trigger: ACACACTTCCAGAGCTGCAAGAAAACGACGAGTTTGGGCAACCCAGTGACAACCGGAAGTTGGCACACGTAGAGGCTGTGTGCATTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | CTCTTAAAGAGTCTCTGGCATCGCCAGGCTTATCTGCTAGGCAGTTaGGGCTGGGATCTGCTTGCTTGTCTGGTCTTGACCTTTGGAGGT | + |
Preference number: 5 (lower is better) Translates to: LLKSLWHRQAYLLGS*GWDLLACLVLTFGG Trigger: ACCTCCAAAGGTCAAGACCAGACAAGCAAGCAGATCCCAGCCCCAACTGCCTAGCAGATAAGCCTGGCGATGCCAGAGACTCTTTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGAGGTGCCCTGGCTCTTaGGTGCTCATCTGTTCCTGG | + |
Preference number: 5 (lower is better) Translates to: VAVKEVPVSQKWRVHMFERCPGS*VLICSW Trigger: CCAGGAACAGATGAGCACCAAAGAGCCAGGGCACCT...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 90 bp | ATGCACACAGCCTCTACGTGTGCCAACTTCCGGTTGTCACTGGGTTaGCCAAACTCGTCGTTTTCTTGCAGCTCTGGAAGTGTGTTGAGA | + |
Preference number: 5 (lower is better) Translates to: MHTASTCANFRLSLG*PNSSFSCSSGSVLR Trigger: TCTCAACACACTTCCAGAGCTGCAAGAAAACGACGAGTTTGGGCAACCCAGTGACAACCGGAAGTTGGCACACGTAGAGGCTGTGTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | AGGAAACAGTTTTTGCTTGGGAAATCGTGGGGAGAAACCTTTGGATaGTCCCTGACAGTGTGCCGAATCATCAGCCTCCAGCAAGGGAGG | + |
Preference number: 5 (lower is better) Translates to: RKQFLLGKSWGETFG*SLTVCRIISLQQGR Trigger: CCTCCCTTGCTGGAGGCTGATGATTCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCCCCACGATTTCCCAAGCAAAAACTGTTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGCCAATAATCCAGCTCTaGGCCAAAAGAGAGCGCACA | + |
Preference number: 5 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVPIIQL*AKRERT Trigger: TGTGCGCTCTCTTTTGGCCAAGAGCTGGATTATTGG...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAAGCTCTGGAAGTGTGTaGAGAGACAGAGCAATGGTG | + |
Preference number: 5 (lower is better) Translates to: VWTAPSGSSCEGGTCVSESSGSV*RDRAMV Trigger: CACCATTGCTCTGTCTCTCAACACACTTCCAGAGCT...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 90 bp | TTATCTCTGCTTAGTGTAAGGAATGGAGGTGCCCTGGCTCTTTGGTaGTCATCTGTTCCTGGGAGGTCCGTGGGGAACTTCATCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: LSLLSVRNGGALALW*SSVPGRSVGNFICK Trigger: TTTGCAGATGAAGTTCCCCACGGACCTCCCAGGAACAGATGAGCACCAAAGAGCCAGGGCACCTCCATTCCTTACACTAAGCAGAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | CTCCTCCTCATACACACATGGCCTCTCAGGCTGTTCTTGGCAGTCTaGATTCGGGTGGGAATGAGGCTGTGTCTTGGTGATTTCATTGTA | + |
Preference number: 5 (lower is better) Translates to: LLLIHTWPLRLFLAV*IRVGMRLCLGDFIV Trigger: TACAATGAAATCACCAAGACACAGCCTCATTCCCACCCGAATCCAGACTGCCAAGAACAGCCTGAGAGGCCATGTGTGTATGAGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCCCACTTCCACCGGCTaGGAGACAGGTGATTATCAT | + |
Preference number: 5 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEPTSTG*ETGDYH Trigger: ATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGGG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAATTCGTGGGAGTCATTTaGGCTAACCTCCTGGTACTT | + |
Preference number: 5 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEFVGVI*ANLLVL Trigger: AAGTACCAGGAGGTTAGCCAAAATGACTCCCACGAA...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | ACCACAGTCTGGTTCTACAGTGGTCAGTCTGATTTGGCTGAAGCGGCTGCAGTGAGCCTGGTAAATGTCTaGCCTACAGTTGTGGTCTGT | + |
Preference number: 5 (lower is better) Translates to: TTVWFYSGQSDLAEAAAVSLVNV*PTVVVC Trigger: ACAGACCACAACTGTAGGCAAGACATTTACCAGGCT...CACTGCAGCCGCTTCAGCCAAATCAGACTGACCACTGTAGAACCAGACTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS TCA 90 bp | GTTCTTGGCAGTCTGGATTCGGGTGGGAATGAGGCTGTGTCTTGGTaGTTTCATTGTATAGCATCTCCAGCTTCTGGGCACTCAGATGCT | + |
Preference number: 5 (lower is better) Translates to: VLGSLDSGGNEAVSW*FHCIASPASGHSDA Trigger: AGCATCTGAGTGCCCAGAAGCTGGAGATGCTATACAATGAAATCACCAAGACACAGCCTCATTCCCACCCGAATCCAGACTGCCAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | TATTCTCGTAAGATTTGTTGGAGCTCGTTTCTGACAGCGCCTTCCTaGCCCACTTCCACCGGCTTGGAGACAGGTGATTATCATCTACTG | + |
Preference number: 5 (lower is better) Translates to: YSRKICWSSFLTAPS*PTSTGLETGDYHLL Trigger: CAGTAGATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAGAAACGAGCTCCAACAAATCTTACGAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | AGAAAGGAAACAGTTTTTGCTTGGGAAATCGTGGGGAGAAACCTTTaGATGGTCCCTGACAGTGTGCCGAATCATCAGCCTCCAGCAAGG | + |
Preference number: 5 (lower is better) Translates to: RKETVFAWEIVGRNL*MVPDSVPNHQPPAR Trigger: CCTTGCTGGAGGCTGATGATTCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCCCCACGATTTCCCAAGCAAAAACTGTTTCCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | ACATGCTGGTCTCACGAGTGGGACAGTGACCTGTGTCTCCTGGGTTaGAATGAATTTCTGGGGCAAACAAGTGGTTCTCCATCTTGTAAC | + |
Preference number: 5 (lower is better) Translates to: TCWSHEWDSDLCLLG*NEFLGQTSGSPSCN Trigger: GTTACAAGATGGAGAACCACTTGTTTGCCCCAGAAATTCATTCCAACCCAGGAGACACAGGTCACTGTCCCACTCGTGAGACCAGCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 90 bp | CATTGTATAGCATCTCCAGCTTCTGGGCACTCAGATGCTGTGGGCTaGAGGAAGAAGTATTGTTCAGATGTTCGTGGGAGTCATTTTGGC | + |
Preference number: 5 (lower is better) Translates to: HCIASPASGHSDAVG*RKKYCSDVRGSHFG Trigger: GCCAAAATGACTCCCACGAACATCTGAACAATACTTCTTCCTCCAGCCCACAGCATCTGAGTGCCCAGAAGCTGGAGATGCTATACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAGAGACTGCAGGCCCGTaGAGTGTCTGGCGAGTTTCA | + |
Preference number: 5 (lower is better) Translates to: VEQLYRLLHAEKSADWCRETAGP*SVWRVS Trigger: TGAAACTCGCCAGACACTCAACGGGCCTGCAGTCTC...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCGAGACTGCAGGCCCGTaGAGTGTCTGGCGAGTTTCA | + |
Preference number: 5 (lower is better) Translates to: QNGLRRGYNFATGSLDSSETAGP*SVWRVS Trigger: TGAAACTCGCCAGACACTCAACGGGCCTGCAGTCTC...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAATTTCTCCTGGCGTTTTaGCTCCTTATAGAACTCAGA | + |
Preference number: 5 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEFLLAF*LLIELR Trigger: TCTGAGTTCTATAAGGAGCAAAAACGCCAGGAGAAA...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCAGCTGGCACTGTCAGGTaGCAAGGGACCATGGGAAGC | + |
Preference number: 5 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPAGTVR*QGTMGS Trigger: GCTTCCCATGGTCCCTTGCAACCTGACAGTGCCAGC...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS GCA 90 bp | TTGGTGATTTCATTGTATAGCATCTCCAGCTTCTGGGCACTCAGATaGTGTGGGCTGGAGGAAGAAGTATTGTTCAGATGTTCGTGGGAG | + |
Preference number: 5 (lower is better) Translates to: LVISLYSISSFWALR*CGLEEEVLFRCSWE Trigger: CTCCCACGAACATCTGAACAATACTTCTTCCTCCAGCCCACAGCATCTGAGTGCCCAGAAGCTGGAGATGCTATACAATGAAATCACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGCCCACTTCCACCGGCTaGGAGACAGGTGATTATCAT | + |
Preference number: 5 (lower is better) Translates to: LRRGYNFATGSLDSSFRQPTSTG*ETGDYH Trigger: ATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGGG...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCACCTCTCAGGCTGTTCTaGGCAGTCTGGATTCGGGTG | + |
Preference number: 5 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPPLRLF*AVWIRV Trigger: CACCCGAATCCAGACTGCCAAGAACAGCCTGAGAGG...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCCTCTCAGGCTGTTCTaGGCAGTCTGGATTCGGGTG | + |
Preference number: 5 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLPLRLF*AVWIRV Trigger: CACCCGAATCCAGACTGCCAAGAACAGCCTGAGAGG...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCAAGGTGCCCTGGCTCTTaGGTGCTCATCTGTTCCTGG | + |
Preference number: 5 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPRCPGS*VLICSW Trigger: CCAGGAACAGATGAGCACCAAAGAGCCAGGGCACCT...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCTCACGGTTATGTCAATaGGGGCATAATCCACTGCAG | + |
Preference number: 5 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFSRLCQ*GHNPLQ Trigger: CTGCAGTGGATTATGCCCCAATTGACATAACCGTGA...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | GTCTGGACAGCTCCTTCAGGCAGTAGCTGTGAAGGAGGTACCTGTGTCTCAGAACATCTTGTAACCTTCTaGACTACTGTCCTTTTTGAC | + |
Preference number: 5 (lower is better) Translates to: VWTAPSGSSCEGGTCVSEHLVTF*TTVLFD Trigger: GTCAAAAAGGACAGTAGTCAAGAAGGTTACAAGATG...TTCTGAGACACAGGTACCTCCTTCACAGCTACTGCCTGAAGGAGCTGTCCAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGTTAAGGCCCCCTACGTaGATCTTAACTCTCCGAGAG | + |
Preference number: 5 (lower is better) Translates to: CAASDFVDLMLNKQITAVLRPPT*ILTLRE Trigger: CTCTCGGAGAGTTAAGATCAACGTAGGGGGCCTTAA...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | TGCGCTGCCTCAGACTTTGTGGATTTGATGTTGAATAAGCAGATTACAGCTGTGAGCTCTGGAAGTGTGTaGAGAGACAGAGCAATGGTG | + |
Preference number: 5 (lower is better) Translates to: CAASDFVDLMLNKQITAVSSGSV*RDRAMV Trigger: CACCATTGCTCTGTCTCTCAACACACTTCCAGAGCT...CACAGCTGTAATCTGCTTATTCAACATCAAATCCACAAAGTCTGAGGCAGCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAACTGAGTCCTTGGTATaGGCTGACTCTCCAGCCTTC | + |
Preference number: 5 (lower is better) Translates to: VEQLYRLLHAEKSADWCRTESLV*ADSPAF Trigger: GAAGGCTGGAGAGTCAGCCAATACCAAGGACTCAGT...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGCTGGCACTGTCAGGTaGCAAGGGACCATGGGAAGC | + |
Preference number: 5 (lower is better) Translates to: QDTQNGLRRGYNFATGSLAGTVR*QGTMGS Trigger: GCTTCCCATGGTCCCTTGCAACCTGACAGTGCCAGC...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGTTGAGGGATCTTGACTaGAGGGGATTGCTCCCTTTC | + |
Preference number: 5 (lower is better) Translates to: LRRGYNFATGSLDSSFRQLRDLD*RGLLPF Trigger: GAAAGGGAGCAATCCCCTCAAGTCAAGATCCCTCAA...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTAAGGCCCCCTACGTaGATCTTAACTCTCCGAGAG | + |
Preference number: 5 (lower is better) Translates to: QNGLRRGYNFATGSLDSSLRPPT*ILTLRE Trigger: CTCTCGGAGAGTTAAGATCAACGTAGGGGGCCTTAA...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTGTTAACTACAGTATGGACAACTGCTCACCAGAACTGCAAAGCCAAGGCCTTCGTCTTGGTGATTTCATaGTATAGCATCTCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: VLTTVWTTAHQNCKAKAFVLVIS*YSISSF Trigger: GAAGCTGGAGATGCTATACAATGAAATCACCAAGAC...GAAGGCCTTGGCTTTGCAGTTCTGGTGAGCAGTTGTCCATACTGTAGTTAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | GAAATGAAAGGAGCAAAAATGTCAGACATGGCTGAGCACAGGTTCCTAAGAGAGAGCCTGGTAAATGTCTaGCCTACAGTTGTGGTCTGT | + |
Preference number: 5 (lower is better) Translates to: EMKGAKMSDMAEHRFLRESLVNV*PTVVVC Trigger: ACAGACCACAACTGTAGGCAAGACATTTACCAGGCT...CTCTCTTAGGAACCTGTGCTCAGCCATGTCTGACATTTTTGCTCCTTTCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTAGCTGTGAAGGAGGTACCTGTGTCTCAGAAATGGCGTGTCCACATGTTTGAGCATCTTGTAACCTTCTaGACTACTGTCCTTTTTGAC | + |
Preference number: 5 (lower is better) Translates to: VAVKEVPVSQKWRVHMFEHLVTF*TTVLFD Trigger: GTCAAAAAGGACAGTAGTCAAGAAGGTTACAAGATG...CTCAAACATGTGGACACGCCATTTCTGAGACACAGGTACCTCCTTCACAGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 90 bp | ACAAGTGGTTCTCCATCTTGTAACCTTCTTGACTACTGTCCTTTTTaGCTTCACCCACAGCCTGGTAAATGTCTTGCCTACAGTTGTGGT | + |
Preference number: 5 (lower is better) Translates to: TSGSPSCNLLDYCPF*LHPQPGKCLAYSCG Trigger: ACCACAACTGTAGGCAAGACATTTACCAGGCTGTGGGTGAAGTCAAAAAGGACAGTAGTCAAGAAGGTTACAAGATGGAGAACCACTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTCACGGTTATGTCAATaGGGGCATAATCCACTGCAG | + |
Preference number: 5 (lower is better) Translates to: QNGLRRGYNFATGSLDSSSRLCQ*GHNPLQ Trigger: CTGCAGTGGATTATGCCCCAATTGACATAACCGTGA...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCACTCCGAGAGCATGTTTaGCTTCGGATAATGTCCACA | + |
Preference number: 5 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPLREHV*LRIMST Trigger: TGTGGACATTATCCGAAGCAAAACATGCTCTCGGAG...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTCCGAGAGCATGTTTaGCTTCGGATAATGTCCACA | + |
Preference number: 5 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLLREHV*LRIMST Trigger: TGTGGACATTATCCGAAGCAAAACATGCTCTCGGAG...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | GTTGAACAATTGTACAGACTACTACATGCAGAGAAGTCTGCTGATTGGTGCAGAATGCTGCCATTTCTTTaGGCTCTTTCAAGAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: VEQLYRLLHAEKSADWCRMLPFL*ALSRAS Trigger: AGAGGCTCTTGAAAGAGCCAAAAGAAATGGCAGCAT...TCTGCACCAATCAGCAGACTTCTCTGCATGTAGTAGTCTGTACAATTGTTCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS-3UTR CAA 90 bp | CAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCATGCTGCCATTTCTTTaGGCTCTTTCAAGAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: QNGLRRGYNFATGSLDSSMLPFL*ALSRAS Trigger: AGAGGCTCTTGAAAGAGCCAAAAGAAATGGCAGCAT...GGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGACTGAGTCCTTGGTATaGGCTGACTCTCCAGCCTTC | + |
Preference number: 5 (lower is better) Translates to: QDTQNGLRRGYNFATGSLTESLV*ADSPAF Trigger: GAAGGCTGGAGAGTCAGCCAATACCAAGGACTCAGT...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | ACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCTTCGTGGGAGTCATTTaGGCTAACCTCCTGGTACTT | + |
Preference number: 5 (lower is better) Translates to: TKWVKKRLQFCNRKSGQLFVGVI*ANLLVL Trigger: AAGTACCAGGAGGTTAGCCAAAATGACTCCCACGAA...GAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGGACAGCTCCTTCAGGCAGGTCTTGGTGATTTCATaGTATAGCATCTCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: LRRGYNFATGSLDSSFRQVLVIS*YSISSF Trigger: GAAGCTGGAGATGCTATACAATGAAATCACCAAGAC...CTGCCTGAAGGAGCTGTCCAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | CAAGATACACAAAATGGGTTAAGAAGAGGTTACAATTTTGCAACAGGAAGTCTGTTGAGGGATCTTGACTaGAGGGGATTGCTCCCTTTC | + |
Preference number: 5 (lower is better) Translates to: QDTQNGLRRGYNFATGSLLRDLD*RGLLPF Trigger: GAAAGGGAGCAATCCCCTCAAGTCAAGATCCCTCAA...CAGACTTCCTGTTGCAAAATTGTAACCTCTTCTTAACCCATTTTGTGTATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS-3UTR CAA 90 bp | TTCTGCCTGATAGGTGACCTTTTTGCAGTAACAACAAATATCTTCAGCTTCCCATTTCTCCTGGCGTTTTaGCTCCTTATAGAACTCAGA | + |
Preference number: 5 (lower is better) Translates to: FCLIGDLFAVTTNIFSFPFLLAF*LLIELR Trigger: TCTGAGTTCTATAAGGAGCAAAAACGCCAGGAGAAA...TGGGAAGCTGAAGATATTTGTTGTTACTGCAAAAAGGTCACCTATCAGGCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170146.3 |
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CDS GCA 72 bp | GGAGGTGCTCTTCATGTCCACGATGACCTCGGTCTGTaGCACAGCCAGCTGCTCCTGTGGGCAGATCACCTC | + |
Preference number: 6 (lower is better) Translates to: GGALHVHDDLGL*HSQLLLWADHL Trigger: GAGGTGATCTGCCCACAGGAGCAGCTGGCTGTGGCACAGACCGAGGTCATCGTGGACATGAAGAGCACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | GCTCCCTTTCAGCGAGCTCTTAGGGCTGTCGCTGGCACTGTCAGGTaGCAAGGGACCATGGGAAGCCCCAGCATCGAGGTTCACGGTTAT | + |
Preference number: 6 (lower is better) Translates to: APFQRALRAVAGTVR*QGTMGSPSIEVHGY Trigger: ATAACCGTGAACCTCGATGCTGGGGCTTCCCATGGTCCCTTGCAACCTGACAGTGCCAGCGACAGCCCTAAGAGCTCGCTGAAAGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 72 bp | AGCTGTCAATGCTGGAGGTGCTCTTCATGTCCACGATaGCCTCGGTCTGTGCCACAGCCAGCTGCTCCTGTG | + |
Preference number: 6 (lower is better) Translates to: SCQCWRCSSCPR*PRSVPQPAAPV Trigger: CACAGGAGCAGCTGGCTGTGGCACAGACCGAGGTCATCGTGGACATGAAGAGCACCTCCAGCATTGACAGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 72 bp | TCGTGGGGAGAAACCTTTGGATGGTCCCTGACAGTGTaGCGAATCATCAGCCTCCAGCAAGGGAGGCTGTCC | + |
Preference number: 6 (lower is better) Translates to: SWGETFGWSLTV*RIISLQQGRLS Trigger: GGACAGCCTCCCTTGCTGGAGGCTGATGATTCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCCCCACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | GGAAGCCCCAGCATCGAGGTTCACGGTTATGTCAATTaGGGCATAATCCACTGCAGCCTCCCTGGCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: GSPSIEVHGYVN*GIIHCSLPGSR Trigger: CCTGCTGCCAGGGAGGCTGCAGTGGATTATGCCCCAATTGACATAACCGTGAACCTCGATGCTGGGGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 72 bp | GGGAAGCCCCAGCATCGAGGTTCACGGTTATGTCAATaGGGGCATAATCCACTGCAGCCTCCCTGGCAGCAG | + |
Preference number: 6 (lower is better) Translates to: GKPQHRGSRLCQ*GHNPLQPPWQQ Trigger: CTGCTGCCAGGGAGGCTGCAGTGGATTATGCCCCAATTGACATAACCGTGAACCTCGATGCTGGGGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | CTGCTTAGTGTAAGGAATGGAGGTGCCCTGGCTCTTTaGTGCTCATCTGTTCCTGGGAGGTCCGTGGGGAAC | + |
Preference number: 6 (lower is better) Translates to: LLSVRNGGALAL*CSSVPGRSVGN Trigger: GTTCCCCACGGACCTCCCAGGAACAGATGAGCACCAAAGAGCCAGGGCACCTCCATTCCTTACACTAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 72 bp | ATGTCCACGATGACCTCGGTCTGTGCCACAGCCAGCTaGTCCTGTGGGCAGATCACCTCTTCCATTTCTATC | + |
Preference number: 6 (lower is better) Translates to: MSTMTSVCATAS*SCGQITSSISI Trigger: GATAGAAATGGAAGAGGTGATCTGCCCACAGGAGCAGCTGGCTGTGGCACAGACCGAGGTCATCGTGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 72 bp | GAGGTTCACGGTTATGTCAATTGGGGCATAATCCACTaGAGCCTCCCTGGCAGCAGGCCCCTTATCTCTGCT | + |
Preference number: 6 (lower is better) Translates to: EVHGYVNWGIIH*SLPGSRPLISA Trigger: AGCAGAGATAAGGGGCCTGCTGCCAGGGAGGCTGCAGTGGATTATGCCCCAATTGACATAACCGTGAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | TGGAGGTGCCCTGGCTCTTTGGTGCTCATCTGTTCCTaGGAGGTCCGTGGGGAACTTCATCTGCAAATGAGA | + |
Preference number: 6 (lower is better) Translates to: WRCPGSLVLICS*EVRGELHLQMR Trigger: TCTCATTTGCAGATGAAGTTCCCCACGGACCTCCCAGGAACAGATGAGCACCAAAGAGCCAGGGCACCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | AGGAACCCACACAGCCCTCTTCTCTTAAAGAGTCTCTaGCATCGCCAGGCTTATCTGCTAGGCAGTTGGGGC | + |
Preference number: 6 (lower is better) Translates to: RNPHSPLLLKSL*HRQAYLLGSWG Trigger: GCCCCAACTGCCTAGCAGATAAGCCTGGCGATGCCAGAGACTCTTTAAGAGAAGAGGGCTGTGTGGGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | TGGAGCTCGTTTCTGACAGCGCCTTCCTGGCCCACTTCCACCGGCTaGGAGACAGGTGATTATCATCTACTGAGTCCTTGGTATTGGCTG | + |
Preference number: 6 (lower is better) Translates to: WSSFLTAPSWPTSTG*ETGDYHLLSPWYWL Trigger: CAGCCAATACCAAGGACTCAGTAGATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAGAAACGAGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 72 bp | GCCTTCCTGGCCCACTTCCACCGGCTTGGAGACAGGTaGTTATCATCTACTGAGTCCTTGGTATTGGCTGAC | + |
Preference number: 6 (lower is better) Translates to: AFLAHFHRLGDR*LSSTESLVLAD Trigger: GTCAGCCAATACCAAGGACTCAGTAGATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGGGCCAGGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 72 bp | CTTCTAGAAGAATGGTACTCATGTGCTGGGGAGTGGTaGGCGGAAAGTCAGCTGTGGTTACTGGCAGTGGCC | + |
Preference number: 6 (lower is better) Translates to: LLEEWYSCAGEW*AESQLWLLAVA Trigger: GGCCACTGCCAGTAACCACAGCTGACTTTCCGCTCACCACTCCCCAGCACATGAGTACCATTCTTCTAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 72 bp | CATGGTAAACCAGGCAATGCACACAGCCTCTACGTGTaGCAACTTCCGGTTGTCACTGGGTTGCCCAAACTC | + |
Preference number: 6 (lower is better) Translates to: HGKPGNAHSLYV*QLPVVTGLPKL Trigger: GAGTTTGGGCAACCCAGTGACAACCGGAAGTTGGCACACGTAGAGGCTGTGTGCATTGCCTGGTTTACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 72 bp | TGGGGGAGGGCTTCTTCTAGAAGAATGGTACTCATGTaGTGGGGAGTGGTGAGCGGAAAGTCAGCTGTGGTT | + |
Preference number: 6 (lower is better) Translates to: WGRASSRRMVLM*WGVVSGKSAVV Trigger: AACCACAGCTGACTTTCCGCTCACCACTCCCCAGCACATGAGTACCATTCTTCTAGAAGAAGCCCTCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | AGGTGTTATCAAACTCCTCACCCTCACGCTCACGCATaGTCTCCGCCTCCCTCCTCAGTTCTTCGTTCATCT | + |
Preference number: 6 (lower is better) Translates to: RCYQTPHPHAHA*SPPPSSVLRSS Trigger: AGATGAACGAAGAACTGAGGAGGGAGGCGGAGACCATGCGTGAGCGTGAGGGTGAGGAGTTTGATAACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 72 bp | GCAATGCACACAGCCTCTACGTGTGCCAACTTCCGGTaGTCACTGGGTTGCCCAAACTCGTCGTTTTCTTGC | + |
Preference number: 6 (lower is better) Translates to: AMHTASTCANFR*SLGCPNSSFSC Trigger: GCAAGAAAACGACGAGTTTGGGCAACCCAGTGACAACCGGAAGTTGGCACACGTAGAGGCTGTGTGCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 72 bp | TTTCTGACAGCGCCTTCCTGGCCCACTTCCACCGGCTaGGAGACAGGTGATTATCATCTACTGAGTCCTTGG | + |
Preference number: 6 (lower is better) Translates to: FLTAPSWPTSTG*ETGDYHLLSPW Trigger: CCAAGGACTCAGTAGATGATAATCACCTGTCTCCAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | GTAAACCAGGCAATGCACACAGCCTCTACGTGTGCCAACTTCCGGTaGTCACTGGGTTGCCCAAACTCGTCGTTTTCTTGCAGCTCTGGA | + |
Preference number: 6 (lower is better) Translates to: VNQAMHTASTCANFR*SLGCPNSSFSCSSG Trigger: TCCAGAGCTGCAAGAAAACGACGAGTTTGGGCAACCCAGTGACAACCGGAAGTTGGCACACGTAGAGGCTGTGTGCATTGCCTGGTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | TCGCCAGGCTTATCTGCTAGGCAGTTGGGGCTGGGATCTGCTTGCTaGTCTGGTCTTGACCTTTGGAGGTCCAAGAAGTCTTCGTCTTCT | + |
Preference number: 6 (lower is better) Translates to: SPGLSARQLGLGSAC*SGLDLWRSKKSSSS Trigger: AGAAGACGAAGACTTCTTGGACCTCCAAAGGTCAAGACCAGACAAGCAAGCAGATCCCAGCCCCAACTGCCTAGCAGATAAGCCTGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 72 bp | GTACTTATTCTCGTAAGATTTGTTGGAGCTCGTTTCTaGCAGCGCCTTCCTGGCCCACTTCCACCGGCTTGG | + |
Preference number: 6 (lower is better) Translates to: VLILVRFVGARF*QRLPGPLPPAW Trigger: CCAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAGAAACGAGCTCCAACAAATCTTACGAGAATAAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | AAGATTTGTTGGAGCTCGTTTCTGACAGCGCCTTCCTaGCCCACTTCCACCGGCTTGGAGACAGGTGATTAT | + |
Preference number: 6 (lower is better) Translates to: KICWSSFLTAPS*PTSTGLETGDY Trigger: ATAATCACCTGTCTCCAAGCCGGTGGAAGTGGGCCAGGAAGGCGCTGTCAGAAACGAGCTCCAACAAATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | ATACACACATGGCCTCTCAGGCTGTTCTTGGCAGTCTaGATTCGGGTGGGAATGAGGCTGTGTCTTGGTGAT | + |
Preference number: 6 (lower is better) Translates to: IHTWPLRLFLAV*IRVGMRLCLGD Trigger: ATCACCAAGACACAGCCTCATTCCCACCCGAATCCAGACTGCCAAGAACAGCCTGAGAGGCCATGTGTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | AATGCACACAGCCTCTACGTGTGCCAACTTCCGGTTGTCACTGGGTaGCCCAAACTCGTCGTTTTCTTGCAGCTCTGGAAGTGTGTTGAG | + |
Preference number: 6 (lower is better) Translates to: NAHSLYVCQLPVVTG*PKLVVFLQLWKCVE Trigger: CTCAACACACTTCCAGAGCTGCAAGAAAACGACGAGTTTGGGCAACCCAGTGACAACCGGAAGTTGGCACACGTAGAGGCTGTGTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS GCA 72 bp | CGGTTGTCACTGGGTTGCCCAAACTCGTCGTTTTCTTaGAGCTCTGGAAGTGTGTTGAGAGACAGAGCAATG | + |
Preference number: 6 (lower is better) Translates to: RLSLGCPNSSFS*SSGSVLRDRAM Trigger: CATTGCTCTGTCTCTCAACACACTTCCAGAGCTGCAAGAAAACGACGAGTTTGGGCAACCCAGTGACAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | TTTTTGCTTGGGAAATCGTGGGGAGAAACCTTTGGATaGTCCCTGACAGTGTGCCGAATCATCAGCCTCCAG | + |
Preference number: 6 (lower is better) Translates to: FLLGKSWGETFG*SLTVCRIISLQ Trigger: CTGGAGGCTGATGATTCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCCCCACGATTTCCCAAGCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 72 bp | GTTCTCCACAGGACTTCGTGGTTAAGGCCCCCTACGTaGATCTTAACTCTCCGAGAGCATGTTTTGCTTCGG | + |
Preference number: 6 (lower is better) Translates to: VLHRTSWLRPPT*ILTLREHVLLR Trigger: CCGAAGCAAAACATGCTCTCGGAGAGTTAAGATCAACGTAGGGGGCCTTAACCACGAAGTCCTGTGGAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 72 bp | TTATCTGCTAGGCAGTTGGGGCTGGGATCTGCTTGCTaGTCTGGTCTTGACCTTTGGAGGTCCAAGAAGTCT | + |
Preference number: 6 (lower is better) Translates to: LSARQLGLGSAC*SGLDLWRSKKS Trigger: AGACTTCTTGGACCTCCAAAGGTCAAGACCAGACAAGCAAGCAGATCCCAGCCCCAACTGCCTAGCAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | CTGTCCAGAGTTCTCCACAGGACTTCGTGGTTAAGGCCCCCTACGTaGATCTTAACTCTCCGAGAGCATGTTTTGCTTCGGATAATGTCC | + |
Preference number: 6 (lower is better) Translates to: LSRVLHRTSWLRPPT*ILTLREHVLLRIMS Trigger: GGACATTATCCGAAGCAAAACATGCTCTCGGAGAGTTAAGATCAACGTAGGGGGCCTTAACCACGAAGTCCTGTGGAGAACTCTGGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS TCA 72 bp | AGTCTGGATTCGGGTGGGAATGAGGCTGTGTCTTGGTaGTTTCATTGTATAGCATCTCCAGCTTCTGGGCAC | + |
Preference number: 6 (lower is better) Translates to: SLDSGGNEAVSW*FHCIASPASGH Trigger: GTGCCCAGAAGCTGGAGATGCTATACAATGAAATCACCAAGACACAGCCTCATTCCCACCCGAATCCAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | ACAGTTTTTGCTTGGGAAATCGTGGGGAGAAACCTTTaGATGGTCCCTGACAGTGTGCCGAATCATCAGCCT | + |
Preference number: 6 (lower is better) Translates to: TVFAWEIVGRNL*MVPDSVPNHQP Trigger: AGGCTGATGATTCGGCACACTGTCAGGGACCATCCAAAGGTTTCTCCCCACGATTTCCCAAGCAAAAACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | TGTCCACAGGTTCTGGAGGAAGAGAAAGTGTTGACCTaGATGTCTTTCTGTTCAAGCCAGGTGGTGCCTTTT | + |
Preference number: 6 (lower is better) Translates to: CPQVLEEEKVLT*MSFCSSQVVPF Trigger: AAAAGGCACCACCTGGCTTGAACAGAAAGACATCCAGGTCAACACTTTCTCTTCCTCCAGAACCTGTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 72 bp | CCCCCTACGTTGATCTTAACTCTCCGAGAGCATGTTTaGCTTCGGATAATGTCCACAGGTTCTGGAGGAAGA | + |
Preference number: 6 (lower is better) Translates to: PPTLILTLREHV*LRIMSTGSGGR Trigger: TCTTCCTCCAGAACCTGTGGACATTATCCGAAGCAAAACATGCTCTCGGAGAGTTAAGATCAACGTAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | TGGTTAAGGCCCCCTACGTTGATCTTAACTCTCCGAGAGCATGTTTaGCTTCGGATAATGTCCACAGGTTCTGGAGGAAGAGAAAGTGTT | + |
Preference number: 6 (lower is better) Translates to: WLRPPTLILTLREHV*LRIMSTGSGGRESV Trigger: AACACTTTCTCTTCCTCCAGAACCTGTGGACATTATCCGAAGCAAAACATGCTCTCGGAGAGTTAAGATCAACGTAGGGGGCCTTAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | AGAAGAGAAAGGAAACAGTTTTTGCTTGGGAAATCGTaGGGAGAAACCTTTGGATGGTCCCTGACAGTGTGC | + |
Preference number: 6 (lower is better) Translates to: RRERKQFLLGKS*GETFGWSLTVC Trigger: GCACACTGTCAGGGACCATCCAAAGGTTTCTCCCCACGATTTCCCAAGCAAAAACTGTTTCCTTTCTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 72 bp | TGGGGCAAACAAGTGGTTCTCCATCTTGTAACCTTCTaGACTACTGTCCTTTTTGACTTCACCCACAGCCTG | + |
Preference number: 6 (lower is better) Translates to: WGKQVVLHLVTF*TTVLFDFTHSL Trigger: CAGGCTGTGGGTGAAGTCAAAAAGGACAGTAGTCAAGAAGGTTACAAGATGGAGAACCACTTGTTTGCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CCA 72 bp | TGTGGGCTGGAGGAAGAAGTATTGTTCAGATGTTCGTaGGAGTCATTTTGGCTAACCTCCTGGTACTTATTC | + |
Preference number: 6 (lower is better) Translates to: CGLEEEVLFRCS*ESFWLTSWYLF Trigger: GAATAAGTACCAGGAGGTTAGCCAAAATGACTCCCACGAACATCTGAACAATACTTCTTCCTCCAGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | TGGGCTGGAGGAAGAAGTATTGTTCAGATGTTCGTGGGAGTCATTTaGGCTAACCTCCTGGTACTTATTCTCGTAAGATTTGTTGGAGCT | + |
Preference number: 6 (lower is better) Translates to: WAGGRSIVQMFVGVI*ANLLVLILVRFVGA Trigger: AGCTCCAACAAATCTTACGAGAATAAGTACCAGGAGGTTAGCCAAAATGACTCCCACGAACATCTGAACAATACTTCTTCCTCCAGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 90 bp | ATGAATTTCTGGGGCAAACAAGTGGTTCTCCATCTTGTAACCTTCTaGACTACTGTCCTTTTTGACTTCACCCACAGCCTGGTAAATGTC | + |
Preference number: 6 (lower is better) Translates to: MNFWGKQVVLHLVTF*TTVLFDFTHSLVNV Trigger: GACATTTACCAGGCTGTGGGTGAAGTCAAAAAGGACAGTAGTCAAGAAGGTTACAAGATGGAGAACCACTTGTTTGCCCCAGAAATTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |
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CDS CAA 72 bp | GGAAGAAGTATTGTTCAGATGTTCGTGGGAGTCATTTaGGCTAACCTCCTGGTACTTATTCTCGTAAGATTT | + |
Preference number: 6 (lower is better) Translates to: GRSIVQMFVGVI*ANLLVLILVRF Trigger: AAATCTTACGAGAATAAGTACCAGGAGGTTAGCCAAAATGACTCCCACGAACATCTGAACAATACTTCTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170146.3 ENSMUST00000175681.3 |