RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050556

Ensembl transcript IDs: ENSMUST00000059826.10, ENSMUST00000207917.2

Found 458 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCCACTGGGTCACAAGCAGGCGGGACGACGCCAGGTCAACGCTTaGACAGGAAGACTGACACCAGGAAGTGCACGGGAACCTCGAGGG +
Preference number: 1 (lower is better)
Translates to: VPLGHKQAGRRQVNA*TGRLTPGSAREPRG
Trigger: CCCTCGAGGTTCCCGTGCACTTCCTGGTGTCAGTCTTCCTGTCCAAGCGTTGACCTGGCGTCGTCCCGCCTGCTTGTGACCCAGTGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp CGACTCAAGCCAAATGGGCCCCAGAGAGAAAGAGGTCAGCTGCCCTaGACTCCCTGTATCCACATCTGGCTCTTGGATGCCCGGTGGCCT +
Preference number: 1 (lower is better)
Translates to: RLKPNGPQRERGQLP*TPCIHIWLLDARWP
Trigger: AGGCCACCGGGCATCCAAGAGCCAGATGTGGATACAGGGAGTGCAGGGCAGCTGACCTCTTTCTCTCTGGGGCCCATTTGGCTTGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp ATGGTTGGCAGGGTCAGAAAAATAGCAAGAGCCGGCTTAGGATGCTaGGCCCTCTGCTGCAGCCCTCCTGCGCTGGTGCCTTCTGGGATG +
Preference number: 1 (lower is better)
Translates to: MVGRVRKIARAGLGC*ALCCSPPALVPSGM
Trigger: CATCCCAGAAGGCACCAGCGCAGGAGGGCTGCAGCAGAGGGCTCAGCATCCTAAGCCGGCTCTTGCTATTTTTCTGACCCTGCCAACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp AGTGCACGGGAACCTCGAGGGATACACATGGGTACTTATTGCTTTTaGCTGTGCCGTCTGCCTAGATGGCCTCAGGGAGGAGCGTCGGGC +
Preference number: 1 (lower is better)
Translates to: SAREPRGIHMGTYCF*LCRLPRWPQGGASG
Trigger: GCCCGACGCTCCTCCCTGAGGCCATCTAGGCAGACGGCACAGCCAAAAGCAATAAGTACCCATGTGTATCCCTCGAGGTTCCCGTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp CGGGAACCTCGAGGGATACACATGGGTACTTATTGCTTTTGGCTGTaGCGTCTGCCTAGATGGCCTCAGGGAGGAGCGTCGGGCTTTTGG +
Preference number: 1 (lower is better)
Translates to: REPRGIHMGTYCFWL*RLPRWPQGGASGFW
Trigger: CCAAAAGCCCGACGCTCCTCCCTGAGGCCATCTAGGCAGACGGCACAGCCAAAAGCAATAAGTACCCATGTGTATCCCTCGAGGTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp CCAGGAAGTGCACGGGAACCTCGAGGGATACACATGGGTACTTATTaGTTTTGGCTGTGCCGTCTGCCTAGATGGCCTCAGGGAGGAGCG +
Preference number: 1 (lower is better)
Translates to: PGSAREPRGIHMGTY*FWLCRLPRWPQGGA
Trigger: CGCTCCTCCCTGAGGCCATCTAGGCAGACGGCACAGCCAAAAGCAATAAGTACCCATGTGTATCCCTCGAGGTTCCCGTGCACTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp AGCTTCGACTCAAGCCAAATGGGCCCCAGAGAGAAAGAGGTCAGCTaGCCTGCACTCCCTGTATCCACATCTGGCTCTTGGATGCCCGGT +
Preference number: 1 (lower is better)
Translates to: SFDSSQMGPREKEVS*PALPVSTSGSWMPG
Trigger: ACCGGGCATCCAAGAGCCAGATGTGGATACAGGGAGTGCAGGGCAGCTGACCTCTTTCTCTCTGGGGCCCATTTGGCTTGAGTCGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp CATAACCGGACCGGGAGATCTCCGCCTCCAGCCCCTGGAGTTATTTaGGTATCTCACTTCCTTTTGCTCTGGTTGGGTCAGGCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: HNRTGRSPPPAPGVI*VSHFLLLWLGQARW
Trigger: CCACCTGGCCTGACCCAACCAGAGCAAAAGGAAGTGAGATACCCAAATAACTCCAGGGGCTGGAGGCGGAGATCTCCCGGTCCGGTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp GTGCCATTTGGAATTGGTTGGGCAGTGGGTGGCTGGCTTGTGGGATaGTCGCTGAGTCTCTTTGAGGGCACAGAGTATAGGGGAAGGGGC +
Preference number: 1 (lower is better)
Translates to: VPFGIGWAVGGWLVG*SLSLFEGTEYRGRG
Trigger: GCCCCTTCCCCTATACTCTGTGCCCTCAAAGAGACTCAGCGATCATCCCACAAGCCAGCCACCCACTGCCCAACCAATTCCAAATGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp CTCGAGGGATACACATGGGTACTTATTGCTTTTGGCTGTGCCGTCTaGCTAGATGGCCTCAGGGAGGAGCGTCGGGCTTTTGGGACAGAC +
Preference number: 1 (lower is better)
Translates to: LEGYTWVLIAFGCAV*LDGLREERRAFGTD
Trigger: GTCTGTCCCAAAAGCCCGACGCTCCTCCCTGAGGCCATCTAGGCAGACGGCACAGCCAAAAGCAATAAGTACCCATGTGTATCCCTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp CTCCGCCTCCAGCCCCTGGAGTTATTTGGGTATCTCACTTCCTTTTaGTCTGGTTGGGTCAGGCCAGGTGGACCACCATGTTCAAGTGGC +
Preference number: 1 (lower is better)
Translates to: LRLQPLELFGYLTSF*SGWVRPGGPPCSSG
Trigger: GCCACTTGAACATGGTGGTCCACCTGGCCTGACCCAACCAGAGCAAAAGGAAGTGAGATACCCAAATAACTCCAGGGGCTGGAGGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp GGCAGCCCAGGTCCCAATTGCACCCGTCTTCACCTGGCTTGCTCCTaGATACCTGGATTCTTAAGAGTGACAGCCAGGGGACATAGACCT +
Preference number: 1 (lower is better)
Translates to: GSPGPNCTRLHLACS*IPGFLRVTARGHRP
Trigger: AGGTCTATGTCCCCTGGCTGTCACTCTTAAGAATCCAGGTATGCAGGAGCAAGCCAGGTGAAGACGGGTGCAATTGGGACCTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp GCTCAGGTAATGAGATCCAGTGGTAGACACTGGCTCCCATGTCCCTaGTCTAGTCAAGTCCCATATACCCCACCCCCACCTCGGACCCTT +
Preference number: 1 (lower is better)
Translates to: AQVMRSSGRHWLPCP*SSQVPYTPPPPRTL
Trigger: AAGGGTCCGAGGTGGGGGTGGGGTATATGGGACTTGACTAGAGCAGGGACATGGGAGCCAGTGTCTACCACTGGATCTCATTACCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp CACATTCTTCTGAGATTTGCTGGAGCCTGCACACACCCTGGTCCTTaGATCCAGTTGGTGGCCCTGGGAAGCAGGATAGCTGGACTTGGG +
Preference number: 1 (lower is better)
Translates to: HILLRFAGACTHPGP*IQLVALGSRIAGLG
Trigger: CCCAAGTCCAGCTATCCTGCTTCCCAGGGCCACCAACTGGATCCAAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAGAAGAATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp TATGGAAACAAGAGAAGGCAGAAGATCGTGATGTGCTACGTGTGCTaGCGGGTGGATCATGCCATCGGACTGCTGGGCCGACCAGCCACA +
Preference number: 1 (lower is better)
Translates to: YGNKRRQKIVMCYVC*RVDHAIGLLGRPAT
Trigger: TGTGGCTGGTCGGCCCAGCAGTCCGATGGCATGATCCACCCGTCAGCACACGTAGCACATCACGATCTTCTGCCTTCTCTTGTTTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp GGGTGGTGGGATGAGCCTTTAGCATCCTACCTGGGACAGGTGGCCTaGCCGCAGCTATGGAAACAAGAGAAGGCAGAAGATCGTGATGTG +
Preference number: 1 (lower is better)
Translates to: GWWDEPLASYLGQVA*PQLWKQEKAEDRDV
Trigger: CACATCACGATCTTCTGCCTTCTCTTGTTTCCATAGCTGCGGTCAGGCCACCTGTCCCAGGTAGGATGCTAAAGGCTCATCCCACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp TTGGAATTGGTTGGGCAGTGGGTGGCTGGCTTGTGGGATGATCGCTaGGTCTCTTTGAGGGCACAGAGTATAGGGGAAGGGGCTGAAGCA +
Preference number: 1 (lower is better)
Translates to: LELVGQWVAGLWDDR*VSLRAQSIGEGAEA
Trigger: TGCTTCAGCCCCTTCCCCTATACTCTGTGCCCTCAAAGAGACTCAGCGATCATCCCACAAGCCAGCCACCCACTGCCCAACCAATTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp TGGAATGGAGACACACAGCACATTCTTCTGAGATTTGCTGGAGCCTaGACACACCCTGGTCCTTGGATCCAGTTGGTGGCCCTGGGAAGC +
Preference number: 1 (lower is better)
Translates to: WNGDTQHILLRFAGA*THPGPWIQLVALGS
Trigger: GCTTCCCAGGGCCACCAACTGGATCCAAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAGAAGAATGTGCTGTGTGTCTCCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp CTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATCCTAGTTaGTGTCCACAGACTTGTCGTGGCTCTCAGGGTCTCTCCTGTCGC +
Preference number: 1 (lower is better)
Translates to: LPSKEEAVRCGPHPS*CPQTCRGSQGLSCR
Trigger: GCGACAGGAGAGACCCTGAGAGCCACGACAAGTCTGTGGACACCAACTAGGATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CCA 90 bp GGCCAGGTGGACCACCATGTTCAAGTGGCCTCTGTCCCCATCCCCTaGCTCTTGTCTTCACTGCTGAGACCCATCTGTCAGATTCATCTT +
Preference number: 1 (lower is better)
Translates to: GQVDHHVQVASVPIP*LLSSLLRPICQIHL
Trigger: AAGATGAATCTGACAGATGGGTCTCAGCAGTGAAGACAAGAGCCAGGGGATGGGGACAGAGGCCACTTGAACATGGTGGTCCACCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp GAGAGGCTACTTCTTTGGGCCAACTTCCTGCCCATGCTCTTCTGCTaGCTTTTAGGTTTCTTCAGGGCCTTGGCTGAGACGGACAGAGGT +
Preference number: 1 (lower is better)
Translates to: ERLLLWANFLPMLFC*LLGFFRALAETDRG
Trigger: ACCTCTGTCCGTCTCAGCCAAGGCCCTGAAGAAACCTAAAAGCCAGCAGAAGAGCATGGGCAGGAAGTTGGCCCAAAGAAGTAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp AAAGAGCGGTACAACACCCGACACCCAACTCTTGCTGCGCCCTTCTaGGACGTTGTGTGTCTCTTGTACGCAGGCTTTAAGAGATCCCTG +
Preference number: 1 (lower is better)
Translates to: KERYNTRHPTLAAPF*DVVCLLYAGFKRSL
Trigger: CAGGGATCTCTTAAAGCCTGCGTACAAGAGACACACAACGTCTCAGAAGGGCGCAGCAAGAGTTGGGTGTCGGGTGTTGTACCGCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp ACGACGCCAGGTCAACGCTTGGACAGGAAGACTGACACCAGGAAGTaGACGGGAACCTCGAGGGATACACATGGGTACTTATTGCTTTTG +
Preference number: 1 (lower is better)
Translates to: TTPGQRLDRKTDTRK*TGTSRDTHGYLLLL
Trigger: CAAAAGCAATAAGTACCCATGTGTATCCCTCGAGGTTCCCGTGCACTTCCTGGTGTCAGTCTTCCTGTCCAAGCGTTGACCTGGCGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp GTTGAGAGGCTACTTCTTTGGGCCAACTTCCTGCCCATGCTCTTCTaGTGGCTTTTAGGTTTCTTCAGGGCCTTGGCTGAGACGGACAGA +
Preference number: 1 (lower is better)
Translates to: VERLLLWANFLPMLF*WLLGFFRALAETDR
Trigger: TCTGTCCGTCTCAGCCAAGGCCCTGAAGAAACCTAAAAGCCAGCAGAAGAGCATGGGCAGGAAGTTGGCCCAAAGAAGTAGCCTCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp CGCACTCAGAGGCAGACAGAGCCTCTAAAGGAGACTAGGAGTATGTaGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGG +
Preference number: 1 (lower is better)
Translates to: RTQRQTEPLKETRSM*LSALLLPSKEEAVR
Trigger: CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCTAGTCTCCTTTAGAGGCTCTGTCTGCCTCTGAGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR TCA 90 bp GAAGACCCTGGTGGAGTATGGCTAATATGGTTGGCTTGGCCTCCTTaGAAGATGGAGCAATCCGAATGGCTTTGCTGGCAGAAGAACCCG +
Preference number: 1 (lower is better)
Translates to: EDPGGVWLIWLAWPP*KMEQSEWLCWQKNP
Trigger: CGGGTTCTTCTGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCATATTAGCCATACTCCACCAGGGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp CCTTGGCTGCGTGCCAACTGTTGGAACCCTTTCTGGATTGCCAGGTaGGCAGAAAGGATTGAGTTTAAATTGTCAGCTCCTCCTGACAGC +
Preference number: 1 (lower is better)
Translates to: PWLRANCWNPFWIAR*AERIEFKLSAPPDS
Trigger: GCTGTCAGGAGGAGCTGACAATTTAAACTCAATCCTTTCTGCTCACCTGGCAATCCAGAAAGGGTTCCAACAGTTGGCACGCAGCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CCA 90 bp TGTGGTACATCCCTGCCTATCCAAACCGAGTTTCGCACATCTAAGTaGGATAGAATCGGGCAACCCCACATTTCCCACAGCTGCTCTGTA +
Preference number: 1 (lower is better)
Translates to: CGTSLPIQTEFRTSK*DRIGQPHISHSCSV
Trigger: TACAGAGCAGCTGTGGGAAATGTGGGGTTGCCCGATTCTATCCCACTTAGATGTGCGAAACTCGGTTTGGATAGGCAGGGATGTACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp GAGACAAGGCTGCAGCTACAGAACACAGAGGAGATGAAGAGAAGGTaGGACTTGGGAGGAAAAAGAGCTCCTATTCCCAGCAACTGTCAG +
Preference number: 1 (lower is better)
Translates to: ETRLQLQNTEEMKRR*DLGGKRAPIPSNCQ
Trigger: CTGACAGTTGCTGGGAATAGGAGCTCTTTTTCCTCCCAAGTCTCACCTTCTCTTCATCTCCTCTGTGTTCTGTAGCTGCAGCCTTGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp GGTAAGACTGTGAGAAATGGAATGGAGACACACAGCACATTCTTCTaGGATTTGCTGGAGCCTGCACACACCCTGGTCCTTGGATCCAGT +
Preference number: 1 (lower is better)
Translates to: GKTVRNGMETHSTFF*DLLEPAHTLVLGSS
Trigger: ACTGGATCCAAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAGAAGAATGTGCTGTGTGTCTCCATTCCATTTCTCACAGTCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp ACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATaGGGGAGATGGAGACAGACAGATTCCCTTTGGGTATGGATGTGG +
Preference number: 1 (lower is better)
Translates to: TLKFTHYLFPTPYIQ*GRWRQTDSLWVWMW
Trigger: CCACATCCATACCCAAAGGGAATCTGTCTGTCTCCATCTCCCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp GTAAGTCTTCTTTCCAGGTGTGGCCTGGGCTGCTTTGGGCGGCCCTaGCCTAGAGACATGAAAGTATTTGGGGGTTGTCATATAAACAAT +
Preference number: 1 (lower is better)
Translates to: VSLLSRCGLGCFGRP*PRDMKVFGGCHINN
Trigger: ATTGTTTATATGACAACCCCCAAATACTTTCATGTCTCTAGGCCAGGGCCGCCCAAAGCAGCCCAGGCCACACCTGGAAAGAAGACTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp CCCACCCACCCTGCTGAGAAAGGGCTTTGCTACTTTGAGCTGAAATaGACAATTCATGTTGAGAGGCTACTTCTTTGGGCCAACTTCCTG +
Preference number: 1 (lower is better)
Translates to: PTHPAEKGLCYFELK*TIHVERLLLWANFL
Trigger: CAGGAAGTTGGCCCAAAGAAGTAGCCTCTCAACATGAATTGTCCATTTCAGCTCAAAGTAGCAAAGCCCTTTCTCAGCAGGGTGGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp GAGAAACTGATCAGAACCACATTCCAAATTAATACATTCAGGGGCTaGAGATGTAGCGCAGGGTGGAGCACTTGTCTGACACAGCCAAGG +
Preference number: 1 (lower is better)
Translates to: EKLIRTTFQINTFRG*RCSAGWSTCLTQPR
Trigger: CCTTGGCTGTGTCAGACAAGTGCTCCACCCTGCGCTACATCTGCAGCCCCTGAATGTATTAATTTGGAATGTGGTTCTGATCAGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTaGATGAAAGCTGTGAAAACACACACACACACACACACACACACA +
Preference number: 1 (lower is better)
Translates to: TWTQNVQDTCADTHM*MKAVKTHTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCACAGCTTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp GATTCTAATATTTCTGGTAACCAGAAAGCACAGTCCTTTAAGATTTaGGAAGGGAAGCAAGCGTCCGAGCTCTGTCTGAGCTCCCGGCAG +
Preference number: 1 (lower is better)
Translates to: DSNISGNQKAQSFKI*EGKQASELCLSSRQ
Trigger: CTGCCGGGAGCTCAGACAGAGCTCGGACGCTTGCTTCCCTTCCCAAATCTTAAAGGACTGTGCTTTCTGGTTACCAGAAATATTAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp ATGTTCAGAACTGACCAAAGACTGGAGACTTGGAAAAGCAGAAGCTaGAAAAATACTGCCACCCTTGCCTCAAGTCTCACCTTGGTGCCG +
Preference number: 1 (lower is better)
Translates to: MFRTDQRLETWKSRS*KNTATLASSLTLVP
Trigger: CGGCACCAAGGTGAGACTTGAGGCAAGGGTGGCAGTATTTTTTCAGCTTCTGCTTTTCCAAGTCTCCAGTCTTTGGTCAGTTCTGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp GCAGGGCCAGCTTACGGCCCAGGGGAAATAGTGCTTGTTTTAAAGTaGGAGATCTTGACACTGTCCCTGGTAGAACCTAGATTAGAAAAA +
Preference number: 1 (lower is better)
Translates to: AGPAYGPGEIVLVLK*EILTLSLVEPRLEK
Trigger: TTTTTCTAATCTAGGTTCTACCAGGGACAGTGTCAAGATCTCGCACTTTAAAACAAGCACTATTTCCCCTGGGCCGTAAGCTGGCCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 90 bp CAGGAGGGACTCAGGAATGCTCCTGAGCTCAGAGACAAGTTTGCTTaGAGGAGGGTCTTGATTCTAATATTTCTGGTAACCAGAAAGCAC +
Preference number: 1 (lower is better)
Translates to: QEGLRNAPELRDKFA*RRVLILIFLVTRKH
Trigger: GTGCTTTCTGGTTACCAGAAATATTAGAATCAAGACCCTCCTGCAAGCAAACTTGTCTCTGAGCTCAGGAGCATTCCTGAGTCCCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp ATATTAAATTTGCATTTGGGCTGCATCCTCTTGGGGTTCTTTCAGTaGGAACACCATCGCTGTCTGATAGGGCTGATCTGGCTTGACTCA +
Preference number: 1 (lower is better)
Translates to: ILNLHLGCILLGFFQ*EHHRCLIGLIWLDS
Trigger: TGAGTCAAGCCAGATCAGCCCTATCAGACAGCGATGGTGTTCCCACTGAAAGAACCCCAAGAGGATGCAGCCCAAATGCAAATTTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp CAGTCACACACAGTCTTTTTGAATAATCTATCTCGTTTGCATATTTaGCGCTTATCTTTTCAGTCCGGGCTAGCCCTGTTTGGGACCCGC +
Preference number: 1 (lower is better)
Translates to: QSHTVFLNNLSRLHI*RLSFQSGLALFGTR
Trigger: GCGGGTCCCAAACAGGGCTAGCCCGGACTGAAAAGATAAGCGTCAAATATGCAAACGAGATAGATTATTCAAAAAGACTGTGTGTGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CCA 90 bp TACTTTGAGCTGAAATGGACAATTCATGTTGAGAGGCTACTTCTTTaGGCCAACTTCCTGCCCATGCTCTTCTGCTGGCTTTTAGGTTTC +
Preference number: 1 (lower is better)
Translates to: YFELKWTIHVERLLL*ANFLPMLFCWLLGF
Trigger: GAAACCTAAAAGCCAGCAGAAGAGCATGGGCAGGAAGTTGGCCCAAAGAAGTAGCCTCTCAACATGAATTGTCCATTTCAGCTCAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 90 bp AATTGTTTCCAATGGATGTTCAGGACTGACCAAGAACTGGAGACTTaGATGTTCAGAACTGACCAAAGACTGGAGACTTGGAAAAGCAGA +
Preference number: 1 (lower is better)
Translates to: NCFQWMFRTDQELET*MFRTDQRLETWKSR
Trigger: TCTGCTTTTCCAAGTCTCCAGTCTTTGGTCAGTTCTGAACATCCAAGTCTCCAGTTCTTGGTCAGTCCTGAACATCCATTGGAAACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp TCTGGAACAAACCAGATTACCAGGAATTTTAGGGATGGGAGAAACTaGTCAGAACCACATTCCAAATTAATACATTCAGGGGCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: SGTNQITRNFRDGRN*SEPHSKLIHSGAAD
Trigger: ATCTGCAGCCCCTGAATGTATTAATTTGGAATGTGGTTCTGATCAGTTTCTCCCATCCCTAAAATTCCTGGTAATCTGGTTTGTTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 90 bp TTTAGCCCATGGAGGGTTGGTAGAAAAATTTATAATATTCTAACTTaGGTTACACTTGTGTGGGGGAAGCTATATTCCCACAGTTCACAC +
Preference number: 1 (lower is better)
Translates to: FSPWRVGRKIYNILT*VTLVWGKLYSHSSH
Trigger: GTGTGAACTGTGGGAATATAGCTTCCCCCACACAAGTGTAACTCAAGTTAGAATATTATAAATTTTTCTACCAACCCTCCATGGGCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp GCCGCTGGTGCACGTGACCCGGCACTGTCTCAGCCCCTTTGCTCCTGTTTTGAGTGCCGTCTGCCTAGATaGCCTCAGGGAGGAGCGTCG +
Preference number: 2 (lower is better)
Translates to: AAGARDPALSQPLCSCFECRLPR*PQGGAS
Trigger: CGACGCTCCTCCCTGAGGCCATCTAGGCAGACGGCA...CTCAAAACAGGAGCAAAGGGGCTGAGACAGTGCCGGGTCACGTGCACCAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp TGTGCCACTGGGTCACAAGCAGGCGGGACGACGCCAGGTCAACGCTaGGACAGGAAGACTGACACCAGGAAGTGCACGGGAACCTCGAGG +
Preference number: 2 (lower is better)
Translates to: CATGSQAGGTTPGQR*DRKTDTRKCTGTSR
Trigger: CCTCGAGGTTCCCGTGCACTTCCTGGTGTCAGTCTTCCTGTCCAAGCGTTGACCTGGCGTCGTCCCGCCTGCTTGTGACCCAGTGGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATGGTCTCTCCTGTCGCTaGGGCTCTGCGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHGLSCR*GSAGVG
Trigger: CCCCACCCCCGCAGAGCCCCAGCGACAGGAGAGACC...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 90 bp CAAGCGTCCGAGCTCTGTCTGAGCTCCCGGCAGCCCAGGTCCCAATaGCACCCGTCTTCACCTGGCTTGCTCCTGCATACCTGGATTCTT +
Preference number: 2 (lower is better)
Translates to: QASELCLSSRQPRSQ*HPSSPGLLLHTWIL
Trigger: AAGAATCCAGGTATGCAGGAGCAAGCCAGGTGAAGACGGGTGCAATTGGGACCTGGGCTGCCGGGAGCTCAGACAGAGCTCGGACGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp AGTCTCACCTTGGTGCCGCTTCGAGGGGCTGGGTGGATCACAGCTTaGGGCTGTCTGTCACTCCTCAGCGTTTGGCTACAAGGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: SLTLVPLRGAGWITA*GCLSLLSVWLQGCL
Trigger: CAGACAGCCTTGTAGCCAAACGCTGAGGAGTGACAGACAGCCCAAAGCTGTGATCCACCCAGCCCCTCGAAGCGGCACCAAGGTGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp TTCCTGCCCATGCTCTTCTGCTGGCTTTTAGGTTTCTTCAGGGCCTaGGCTGAGACGGACAGAGGTAGGGCTAGACGCGGAGAGGACGGC +
Preference number: 2 (lower is better)
Translates to: FLPMLFCWLLGFFRA*AETDRGRARRGEDG
Trigger: GCCGTCCTCTCCGCGTCTAGCCCTACCTCTGTCCGTCTCAGCCAAGGCCCTGAAGAAACCTAAAAGCCAGCAGAAGAGCATGGGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp ATGGTTGGCTTGGCCTCCTTGAAAGATGGAGCAATCCGAATGGCTTaGCTGGCAGAAGAACCCGGGCCTTACACTCTGGGGTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: MVGLASLKDGAIRMA*LAEEPGPYTLGSWG
Trigger: CCCCCAGGACCCCAGAGTGTAAGGCCCGGGTTCTTCTGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp GCAAGCGTCCGAGCTCTGTCTGAGCTCCCGGCAGCCCAGGTCCCAATTGCACCCGCCCCTGGAGTTATTTaGGTATCTCACTTCCTTTTG +
Preference number: 2 (lower is better)
Translates to: ASVRALSELPAAQVPIAPAPGVI*VSHFLL
Trigger: CAAAAGGAAGTGAGATACCCAAATAACTCCAGGGGC...GGGTGCAATTGGGACCTGGGCTGCCGGGAGCTCAGACAGAGCTCGGACGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp GGCCGGTTGACAAGAAAGAGCGGTACAACACCCGACACCCAACTCTaGCTGCGCCCTTCTGAGACGTTGTGTGTCTCTTGTACGCAGGCT +
Preference number: 2 (lower is better)
Translates to: GRLTRKSGTTPDTQL*LRPSETLCVSCTQA
Trigger: AGCCTGCGTACAAGAGACACACAACGTCTCAGAAGGGCGCAGCAAGAGTTGGGTGTCGGGTGTTGTACCGCTCTTTCTTGTCAACCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp GCACATTCTTCTGAGATTTGCTGGAGCCTGCACACACCCTGGTCCTaGGATCCAGTTGGTGGCCCTGGGAAGCAGGATAGCTGGACTTGG +
Preference number: 2 (lower is better)
Translates to: AHSSEICWSLHTPWS*DPVGGPGKQDSWTW
Trigger: CCAAGTCCAGCTATCCTGCTTCCCAGGGCCACCAACTGGATCCAAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAGAAGAATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp GACACAGAGTTGCTCTCCCAGACCCCCATCACCCACCCATTGCTAGGAACTCCAGTACCCATCCCCCTTTaGTTCAGTGCAGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: DTELLSQTPITHPLLGTPVPIPL*FSAGCG
Trigger: ACCACAGCCTGCACTGAATCAAAGGGGGATGGGTAC...TGGAGTTCCTAGCAATGGGTGGGTGATGGGGGTCTGGGAGAGCAACTCTGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTCCTACCTGGGACAGGTaGCCTGACCGCAGCTATGGA +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPPTWDR*PDRSYG
Trigger: TCCATAGCTGCGGTCAGGCCACCTGTCCCAGGTAGG...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp GGTACAACACCCGACACCCAACTCTTGCTGCGCCCTTCTGAGACGTaGTGTGTCTCTTGTACGCAGGCTTTAAGAGATCCCTGCCTCCGA +
Preference number: 2 (lower is better)
Translates to: GTTPDTQLLLRPSET*CVSCTQALRDPCLR
Trigger: TCGGAGGCAGGGATCTCTTAAAGCCTGCGTACAAGAGACACACAACGTCTCAGAAGGGCGCAGCAAGAGTTGGGTGTCGGGTGTTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp GCTGGCAGAGCTCAGAGTCCAGAGCTGAGGCAGGTAGGTGACTGGTaGGGCATGGGAGGTGATCTGATTGGCTTTTCTTGTCCCATGGAA +
Preference number: 2 (lower is better)
Translates to: AGRAQSPELRQVGDW*GMGGDLIGFSCPME
Trigger: TTCCATGGGACAAGAAAAGCCAATCAGATCACCTCCCATGCCCAACCAGTCACCTACCTGCCTCAGCTCTGGACTCTGAGCTCTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGAACACCTGCCTCAGCTaGCGCCATGAGAGATGGCGA +
Preference number: 2 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGNTCLS*RHERWR
Trigger: TCGCCATCTCTCATGGCGTCAGCTGAGGCAGGTGTT...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp GAGGGGCTGGGTGGATCACAGCTTTGGGCTGTCTGTCACTCCTCAGCGTTTGGCTCTTGTCTTCACTGCTaGGACCCATCTGTCAGATTC +
Preference number: 2 (lower is better)
Translates to: EGLGGSQLWAVCHSSAFGSCLHC*DPSVRF
Trigger: GAATCTGACAGATGGGTCTCAGCAGTGAAGACAAGA...GCCAAACGCTGAGGAGTGACAGACAGCCCAAAGCTGTGATCCACCCAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp GAGGGGCTGGGTGGATCACAGCTTTGGGCTGTCTGTCACTCCTCAGCGTTTGGCCTGTTGCCCCAGATCTaGTGCTTTGGAAACATCCAA +
Preference number: 2 (lower is better)
Translates to: EGLGGSQLWAVCHSSAFGLLPQI*CFGNIQ
Trigger: TTGGATGTTTCCAAAGCAGCAGATCTGGGGCAACAG...GCCAAACGCTGAGGAGTGACAGACAGCCCAAAGCTGTGATCCACCCAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTTCTTCTTTCCAGGTGTaGCCTGGGCTGCTTTGGGCG +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPSSFQV*PGLLWA
Trigger: CGCCCAAAGCAGCCCAGGCCACACCTGGAAAGAAGA...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTACCCACCCACCCTGCTaGGAAAGGGCTTTGCTACTT +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPTHPPC*ERALLL
Trigger: AAGTAGCAAAGCCCTTTCTCAGCAGGGTGGGTGGGT...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp GACACAGAGTTGCTCTCCCAGACCCCCATCACCCACCCATTGCTAGGAACTCCATTATATCCCCTTGGCTaGGTGCCAACTGTTGGAACC +
Preference number: 2 (lower is better)
Translates to: DTELLSQTPITHPLLGTPLYPLG*VPTVGT
Trigger: GGTTCCAACAGTTGGCACGCAGCCAAGGGGATATAA...TGGAGTTCCTAGCAATGGGTGGGTGATGGGGGTCTGGGAGAGCAACTCTGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTGAATTGGTTGGGCAGTaGGTGGCTGGCTTGTGGGAT +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPELVGQ*VAGLWD
Trigger: ATCCCACAAGCCAGCCACCCACTGCCCAACCAATTC...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ACAGCAGCTGGAGGTCACATAGGGGTCACAAGTCCCTCTCACCACATGCAGAAGCTTTGGGTATGGATGTaGGAGAGCGGGCTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: TAAGGHIGVTSPSHHMQKLWVWM*ESGLSS
Trigger: AGAGGAAAGCCCGCTCTCCCACATCCATACCCAAAG...CTTCTGCATGTGGTGAGAGGGACTTGTGACCCCTATGTGACCTCCAGCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGTGTGGCTGTCAGCTCTaGTCCTGCCATCTAAGGAAG +
Preference number: 2 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGCGCQL*SCHLRK
Trigger: CTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACA...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp ACAGCAGCTGGAGGTCACATAGGGGTCACAAGTCCCTCTCACCACATGCAGAAGTGGCTCCCATGTCCCTaGTCTAGTCAAGTCCCATAT +
Preference number: 2 (lower is better)
Translates to: TAAGGHIGVTSPSHHMQKWLPCP*SSQVPY
Trigger: ATATGGGACTTGACTAGAGCAGGGACATGGGAGCCA...CTTCTGCATGTGGTGAGAGGGACTTGTGACCCCTATGTGACCTCCAGCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATGGTTGGCTTGGCCTCCTTGAAAGATGGAGCAATCCGAATGGCTTTGCTGGCATTGGGTCAGGCCAGGTaGACCACCATGTTCAAGTGG +
Preference number: 2 (lower is better)
Translates to: MVGLASLKDGAIRMALLALGQAR*TTMFKW
Trigger: CCACTTGAACATGGTGGTCCACCTGGCCTGACCCAA...TGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAAGTCCTTGGATCCAGTTaGTGGCCCTGGGAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKVLGSS*WPWEAG
Trigger: TCCTGCTTCCCAGGGCCACCAACTGGATCCAAGGAC...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTAGATGTAGCGCAGGGTaGAGCACTTGTCTGACACAG +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPRCSAG*STCLTQ
Trigger: CTGTGTCAGACAAGTGCTCCACCCTGCGCTACATCT...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTACCTCAGCTGACGCCATaGGAGATGGCGATGACGCAC +
Preference number: 2 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVPQLTP*EMAMTH
Trigger: GTGCGTCATCGCCATCTCTCATGGCGTCAGCTGAGG...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp TGCTACTTTAAAGTCAGACAAAACACAAGAGGGAGGGACAGCCAGGTCCTACACACCTCTCCTGTCCCATaGGGGATGAGGGGTGATCCT +
Preference number: 2 (lower is better)
Translates to: CYFKVRQNTRGRDSQVLHTSPVP*GMRGDP
Trigger: AGGATCACCCCTCATCCCTCATGGGACAGGAGAGGT...GTGTAGGACCTGGCTGTCCCTCCCTCTTGTGTTTTGTCTGACTTTAAAGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGGTTTTGAGAAAGCTCTaGGGACGGATGGTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: AHSEVHTLPLPHALYPMRVLRKL*GRMVRQ
Trigger: CTGCCTCACCATCCGTCCTCAGAGCTTTCTCAAAAC...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGGGACAGAGACAAGGCTaGAGCTACAGAACACAGAGG +
Preference number: 2 (lower is better)
Translates to: AHSEVHTLPLPHALYPMRGQRQG*SYRTQR
Trigger: CCTCTGTGTTCTGTAGCTGCAGCCTTGTCTCTGTCC...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAAAGGCAGGTAGGTGACTaGTTGGGCATGGGAGGTGAT +
Preference number: 2 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKRQVGD*LGMGGD
Trigger: ATCACCTCCCATGCCCAACCAGTCACCTACCTGCCT...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTTTGGGGTTCTTTCAGTaGGAACACCATCGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPLGFFQ*EHHRCL
Trigger: CAGACAGCGATGGTGTTCCCACTGAAAGAACCCCAA...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTGCAGCCCTCCTGCGCTaGTGCCTTCTGGGATGGCCC +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDIAALLR*CLLGWP
Trigger: GGGCCATCCCAGAAGGCACCAGCGCAGGAGGGCTGC...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp CCCAAGTGCAGGGCCAGCTTACGGCCCAGGGGAAATAGTGCTTGTTTTAAAGTGGAACCCTTTCTGGATTaGCAGGTGAGCAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: PKCRASLRPRGNSACFKVEPFLD*QVSRKD
Trigger: ATCCTTTCTGCTCACCTGGCAATCCAGAAAGGGTTC...CACTTTAAAACAAGCACTATTTCCCCTGGGCCGTAAGCTGGCCCTGCACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ACAGCAGCTGGAGGTCACATAGGGGTCACAAGTCCCTCTCACCACATGCAGAAGCTCGAGGGATACACATaGGTACTTATTGCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: TAAGGHIGVTSPSHHMQKLEGYT*VLIAFG
Trigger: GCCAAAAGCAATAAGTACCCATGTGTATCCCTCGAG...CTTCTGCATGTGGTGAGAGGGACTTGTGACCCCTATGTGACCTCCAGCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTCAGTCCTTTAAGATTTaGGAAGGGAAGCAAGCGTCC +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPQSFKI*EGKQAS
Trigger: GGACGCTTGCTTCCCTTCCCAAATCTTAAAGGACTG...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ACAGCAGCTGGAGGTCACATAGGGGTCACAAGTCCCTCTCACCACATGCAGAAGCTGATAGGGCTGATCTaGCTTGACTCAAATTTCTGG +
Preference number: 2 (lower is better)
Translates to: TAAGGHIGVTSPSHHMQKLIGLI*LDSNFW
Trigger: CCAGAAATTTGAGTCAAGCCAGATCAGCCCTATCAG...CTTCTGCATGTGGTGAGAGGGACTTGTGACCCCTATGTGACCTCCAGCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTGCAGACACCCACATGTaGATGAAAGCTGTGAAAACA +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPADTHM*MKAVKT
Trigger: TGTTTTCACAGCTTTCATGCACATGTGGGTGTCTGC...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp ATGGTTGGCTTGGCCTCCTTGAAAGATGGAGCAATCCGAATGGCTTTGCTGGCATTCTGGATTGCCAGGTaGGCAGAAAGGATTGAGTTT +
Preference number: 2 (lower is better)
Translates to: MVGLASLKDGAIRMALLAFWIAR*AERIEF
Trigger: AAACTCAATCCTTTCTGCTCACCTGGCAATCCAGAA...TGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGGAGATGAAGAGAAGGTaGGACTTGGGAGGAAAAAGA +
Preference number: 2 (lower is better)
Translates to: AHSEVHTLPLPHALYPMREMKRR*DLGGKR
Trigger: TCTTTTTCCTCCCAAGTCTCACCTTCTCTTCATCTC...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp TTATATCCCCTTGGCTGCGTGCCAACTGTTGGAACCCTTTCTGGATaGCCAGGTGAGCAGAAAGGATTGAGTTTAAATTGTCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: LYPLGCVPTVGTLSG*PGEQKGLSLNCQLL
Trigger: GAGGAGCTGACAATTTAAACTCAATCCTTTCTGCTCACCTGGCAATCCAGAAAGGGTTCCAACAGTTGGCACGCAGCCAAGGGGATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp GACATTACCCACTCACACTATAGTAAGAAAACCACATTGCCCTATTGTACCAGAAACACCTGCCTCAGCTaGCGCCATGAGAGATGGCGA +
Preference number: 2 (lower is better)
Translates to: DITHSHYSKKTTLPYCTRNTCLS*RHERWR
Trigger: TCGCCATCTCTCATGGCGTCAGCTGAGGCAGGTGTT...TCTGGTACAATAGGGCAATGTGGTTTTCTTACTATAGTGTGAGTGGGTAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAAGCTGAGAAAGGGCTTTaGTACTTTGAGCTGAAATGG +
Preference number: 2 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKAEKGL*YFELKW
Trigger: CCATTTCAGCTCAAAGTAGCAAAGCCCTTTCTCAGC...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CTTCTCAGACTAAAGCCCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGAAAATTGTGTGTGTGTaGGGTCCTTGGGTCTCCGAG +
Preference number: 2 (lower is better)
Translates to: LLRLKPQIPQNTESFEPLKIVCV*GPWVSE
Trigger: CTCGGAGACCCAAGGACCCCACACACACACAATTTT...CAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGGGCTTTAGTCTGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTTACTCGAGACAAAGTTaGCAGAGAAACAAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPYSRQS*QRNKEK
Trigger: CTTTTCCTTGTTTCTCTGCCAACTTTGTCTCGAGTA...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATGGTTGGCTTGGCCTCCTTGAAAGATGGAGCAATCCGAATGGCTTTGCTGGCAGTAACTCTGGCTTACTaGTCTACCTTGCCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: MVGLASLKDGAIRMALLAVTLAY*STLPFK
Trigger: TTTGAAAGGCAAGGTAGACCAGTAAGCCAGAGTTAC...TGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATGAGACTAGGAGTATGTaGCTGTCAGCTCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYETRSM*LSALLL
Trigger: CAGGAGCAGAGCTGACAGCCACATACTCCTAGTCTC...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTACACCCACTACTGCTTaGCCAGCCCACTCTCTCACT +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDITPTTA*PAHSLT
Trigger: AGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGT...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp AAGAGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTGGATCTTCTCGGGAAGAGAAGGTGAGACTTaGGAGGAAAAAGAGCTCCTA +
Preference number: 2 (lower is better)
Translates to: KRMLLRLVSSLEMWIFSGREGET*EEKELL
Trigger: TAGGAGCTCTTTTTCCTCCCAAGTCTCACCTTCTCT...TCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGCCATCTCCAGACAACTaGAATCCAACAAAACAAAAC +
Preference number: 2 (lower is better)
Translates to: AHSEVHTLPLPHALYPMRPSPDN*NPTKQN
Trigger: GTTTTGTTTTGTTGGATTCCAGTTGTCTGGAGATGG...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTTACTTTGAGCTGAAATaGACAATTCATGTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: QPHISHSCSVTAVSWETPYFELK*TIHVER
Trigger: CCTCTCAACATGAATTGTCCATTTCAGCTCAAAGTA...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp CCAACTGTTGGAACCCTTTCTGGATTGCCAGGTGAGCAGAAAGGATaGAGTTTAAATTGTCAGCTCCTCCTGACAGCTTCTCAGACTAAA +
Preference number: 2 (lower is better)
Translates to: PTVGTLSGLPGEQKG*SLNCQLLLTASQTK
Trigger: TTTAGTCTGAGAAGCTGTCAGGAGGAGCTGACAATTTAAACTCAATCCTTTCTGCTCACCTGGCAATCCAGAAAGGGTTCCAACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 90 bp AGCATTTGGGACATTACCCACTCACACTATAGTAAGAAAACCACATaGCCCTATTGTACCAGAGACAGGCTGACCAACAACATCGCCGTA +
Preference number: 2 (lower is better)
Translates to: SIWDITHSHYSKKTT*PYCTRDRLTNNIAV
Trigger: TACGGCGATGTTGTTGGTCAGCCTGTCTCTGGTACAATAGGGCAATGTGGTTTTCTTACTATAGTGTGAGTGGGTAATGTCCCAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp CTAACAGCCCCTTCCAAATTCAGTTCAAGTCACCATCTGGAAATTTaGAGAGGAATTCTAGGACAAGGAGAGAAGGTCAGAGGTACCCTC +
Preference number: 2 (lower is better)
Translates to: LTAPSKFSSSHHLEI*RGILGQGEKVRGTL
Trigger: GAGGGTACCTCTGACCTTCTCTCCTTGTCCTAGAATTCCTCTCAAAATTTCCAGATGGTGACTTGAACTGAATTTGGAAGGGGCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp ATGGTTGGCTTGGCCTCCTTGAAAGATGGAGCAATCCGAATGGCTTTGCTGGCATATAATATTCTAACTTaGGTTACACTTGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: MVGLASLKDGAIRMALLAYNILT*VTLVWG
Trigger: CCCCCACACAAGTGTAACTCAAGTTAGAATATTATA...TGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTGAGACTAGGAGTATGTaGCTGTCAGCTCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDIETRSM*LSALLL
Trigger: CAGGAGCAGAGCTGACAGCCACATACTCCTAGTCTC...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGCTAGGAAAGGTATTCTaGATTCATCATTTTCTCGGT +
Preference number: 2 (lower is better)
Translates to: AHSEVHTLPLPHALYPMRLGKVF*IHHFLG
Trigger: ACCGAGAAAATGATGAATCCAGAATACCTTTCCTAG...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTCCATTTGGAATTGGTTaGGCAGTGGGTGGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDIPFGIG*AVGGWL
Trigger: AAGCCAGCCACCCACTGCCCAACCAATTCCAAATGG...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAACACACACAGTCTTTTTaGATAATCTATCTCGTTTGC +
Preference number: 2 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKHTQSF*IIYLVC
Trigger: GCAAACGAGATAGATTATTCAAAAAGACTGTGTGTG...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp TGCTACTTTAAAGTCAGACAAAACACAAGAGGGAGGGACAGCCAGGTCCTACACCACAGGGCAGTTCAGTaGAGGATTTTTCTTTTCTTT +
Preference number: 2 (lower is better)
Translates to: CYFKVRQNTRGRDSQVLHHRAVQ*RIFLFF
Trigger: AAAGAAAAGAAAAATCCTTCACTGAACTGCCCTGTG...GTGTAGGACCTGGCTGTCCCTCCCTCTTGTGTTTTGTCTGACTTTAAAGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR TCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTCAGGTACATGCGGCCTaGGACTCTGTGTTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDIQVHAA*DSVFLF
Trigger: AAAAAGGAACACAGAGTCTCAGGCCGCATGTACCTG...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTAAAATTGTGTGTGTGTaGGGTCCTTGGGTCTCCGAG +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDIKIVCV*GPWVSE
Trigger: CTCGGAGACCCAAGGACCCCACACACACACAATTTT...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATCTTCCTCCTGCCAACCTGTCAGATACACATACACAAAGTCTGTCTCCAAACGGATTCATCTTCATCTTaGCAACCCAAGATTTCCCAG +
Preference number: 2 (lower is better)
Translates to: IFLLPTCQIHIHKVCLQTDSSSS*QPKISQ
Trigger: CTGGGAAATCTTGGGTTGCCAAGATGAAGATGAATC...CGTTTGGAGACAGACTTTGTGTATGTGTATCTGACAGGTTGGCAGGAGGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTCACATGGGTACTTATTaGTTTTGGCTGTGCCGTCTG +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDIHMGTY*FWLCRL
Trigger: CAGACGGCACAGCCAAAAGCAATAAGTACCCATGTG...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp AAGAGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTGGATCTTCTCGGGATTCCTTTTTAGCCCATaGAGGGTTGGTAGAAAAATT +
Preference number: 2 (lower is better)
Translates to: KRMLLRLVSSLEMWIFSGFLFSP*RVGRKI
Trigger: AATTTTTCTACCAACCCTCCATGGGCTAAAAAGGAA...TCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTCTTCTCTTCCCTAAGTaGTCCTTGTTAGACCATTGG +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDILLFPK*SLLDHW
Trigger: CCAATGGTCTAACAAGGACCACTTAGGGAAGAGAAG...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 90 bp CACATAATCACACACACACACACACACACACACGCACACAAAATCTaGTCTGTTTTATTTGGCTCTGGAACAAACCAGATTACCAGGAAT +
Preference number: 2 (lower is better)
Translates to: HIITHTHTHTHAHKI*SVLFGSGTNQITRN
Trigger: ATTCCTGGTAATCTGGTTTGTTCCAGAGCCAAATAAAACAGACAAGATTTTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGATTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR GCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTTTGCCCCAGATCTGCTaGTTTGGAAACATCCAAAAA +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDILPQIC*FGNIQK
Trigger: TTTTTGGATGTTTCCAAAGCAGCAGATCTGGGGCAA...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTCTTGTCTGTTTTATTTaGCTCTGGAACAAACCAGAT +
Preference number: 2 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDILVCFI*LWNKPD
Trigger: ATCTGGTTTGTTCCAGAGCCAAATAAAACAGACAAG...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp CCCTGCTTCCTGTCTCCAGGATGCCGCTGGTGCACGTaGCCCGGCACTGTCTCAGCCCCTTTGCTCCTGTTT +
Preference number: 3 (lower is better)
Translates to: PCFLSPGCRWCT*PGTVSAPLLLF
Trigger: AAACAGGAGCAAAGGGGCTGAGACAGTGCCGGGTCACGTGCACCAGCGGCATCCTGGAGACAGGAAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp GAGGGGCTGGGTGGATCACAGCTTTGGGCTGTCTGTCACTCCTCAGCGTTTGGCGGGGGACCCAGGTCTTaGGAGATGCTGAGAAGCGTC +
Preference number: 3 (lower is better)
Translates to: EGLGGSQLWAVCHSSAFGGGPRS*EMLRSV
Trigger: GACGCTTCTCAGCATCTCCAAAGACCTGGGTCCCCC...GCCAAACGCTGAGGAGTGACAGACAGCCCAAAGCTGTGATCCACCCAGCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp GCTACGTGTGCTGACGGGTGGATCATGCCATCGGACTaGTGGGCCGACCAGCCACACACGATACTGAGGACA +
Preference number: 3 (lower is better)
Translates to: ATCADGWIMPSD*WADQPHTILRT
Trigger: TGTCCTCAGTATCGTGTGTGGCTGGTCGGCCCAGCAGTCCGATGGCATGATCCACCCGTCAGCACACGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp ACGTGTGCTGACGGGTGGATCATGCCATCGGACTGCTaGGCCGACCAGCCACACACGATACTGAGGACAGGT +
Preference number: 3 (lower is better)
Translates to: TCADGWIMPSDC*ADQPHTILRTG
Trigger: ACCTGTCCTCAGTATCGTGTGTGGCTGGTCGGCCCAGCAGTCCGATGGCATGATCCACCCGTCAGCACACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TCTTGGATGCCCGGTGGCCTCAAGCGGTTCAAACCTTaGGGAAACCCCGAGACTGGGAGCTGGGCTGTTGAG +
Preference number: 3 (lower is better)
Translates to: SWMPGGLKRFKP*GNPETGSWAVE
Trigger: CTCAACAGCCCAGCTCCCAGTCTCGGGGTTTCCCCAAGGTTTGAACCGCTTGAGGCCACCGGGCATCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp AGGGTCAGAAAAATAGCAAGAGCCGGCTTAGGATGCTaGGCCCTCTGCTGCAGCCCTCCTGCGCTGGTGCCT +
Preference number: 3 (lower is better)
Translates to: RVRKIARAGLGC*ALCCSPPALVP
Trigger: AGGCACCAGCGCAGGAGGGCTGCAGCAGAGGGCTCAGCATCCTAAGCCGGCTCTTGCTATTTTTCTGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp ACCTTGTCCACAGTAAGGCTTTCCCGGTGCGACAGGTaGGCACAGCAGTCCGACGCCTGGCCTTTTCTGATG +
Preference number: 3 (lower is better)
Translates to: TLSTVRLSRCDR*AQQSDAWPFLM
Trigger: CATCAGAAAAGGCCAGGCGTCGGACTGCTGTGCGCACCTGTCGCACCGGGAAAGCCTTACTGTGGACAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TGGTGCCGCTTCGAGGGGCTGGGTGGATCACAGCTTTaGGCTGTCTGTCACTCCTCAGCGTTTGGCTACAAG +
Preference number: 3 (lower is better)
Translates to: WCRFEGLGGSQL*AVCHSSAFGYK
Trigger: CTTGTAGCCAAACGCTGAGGAGTGACAGACAGCCCAAAGCTGTGATCCACCCAGCCCCTCGAAGCGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp AGCTGCCCTGCACTCCCTGTATCCACATCTGGCTCTTaGATGCCCGGTGGCCTCAAGCGGTTCAAACCTTGG +
Preference number: 3 (lower is better)
Translates to: SCPALPVSTSGS*MPGGLKRFKPW
Trigger: CCAAGGTTTGAACCGCTTGAGGCCACCGGGCATCCAAGAGCCAGATGTGGATACAGGGAGTGCAGGGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp AGAGGTCAGCTGCCCTGCACTCCCTGTATCCACATCTaGCTCTTGGATGCCCGGTGGCCTCAAGCGGTTCAA +
Preference number: 3 (lower is better)
Translates to: RGQLPCTPCIHI*LLDARWPQAVQ
Trigger: TTGAACCGCTTGAGGCCACCGGGCATCCAAGAGCCAGATGTGGATACAGGGAGTGCAGGGCAGCTGACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp GGGACCCCTTGCCCTTTAGCTTCGACTCAAGCCAAATaGGCCCCAGAGAGAAAGAGGTCAGCTGCCCTGCAC +
Preference number: 3 (lower is better)
Translates to: GTPCPLASTQAK*APERKRSAALH
Trigger: GTGCAGGGCAGCTGACCTCTTTCTCTCTGGGGCCCATTTGGCTTGAGTCGAAGCTAAAGGGCAAGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp AACCCCTTGCTCCAACACCTGCCTCAGCTGACGCCATaGGAGATGGCGATGACGCACTCAGAGGCAGACAGA +
Preference number: 3 (lower is better)
Translates to: NPLLQHLPQLTP*EMAMTHSEADR
Trigger: TCTGTCTGCCTCTGAGTGCGTCATCGCCATCTCTCATGGCGTCAGCTGAGGCAGGTGTTGGAGCAAGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR TCA 72 bp AGTCTCTTTGAGGGCACAGAGTATAGGGGAAGGGGCTaGAGCACCAATGCAGTGGCCAACCACAGGCGAGCC +
Preference number: 3 (lower is better)
Translates to: SLFEGTEYRGRG*STNAVANHRRA
Trigger: GGCTCGCCTGTGGTTGGCCACTGCATTGGTGCTTCAGCCCCTTCCCCTATACTCTGTGCCCTCAAAGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp GTTGGGCAGTGGGTGGCTGGCTTGTGGGATGATCGCTaGGTCTCTTTGAGGGCACAGAGTATAGGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: VGQWVAGLWDDR*VSLRAQSIGEG
Trigger: CCCTTCCCCTATACTCTGTGCCCTCAAAGAGACTCAGCGATCATCCCACAAGCCAGCCACCCACTGCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp GCTGGTGCACGTGACCCGGCACTGTCTCAGCCCCTTTaGTCCTGTTTTGAGAAAGCTCTGAGGACGGATGGT +
Preference number: 3 (lower is better)
Translates to: AGARDPALSQPL*SCFEKALRTDG
Trigger: ACCATCCGTCCTCAGAGCTTTCTCAAAACAGGAGCAAAGGGGCTGAGACAGTGCCGGGTCACGTGCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp CCAAATGGGCCCCAGAGAGAAAGAGGTCAGCTGCCCTaGACTCCCTGTATCCACATCTGGCTCTTGGATGCC +
Preference number: 3 (lower is better)
Translates to: PNGPQRERGQLP*TPCIHIWLLDA
Trigger: GGCATCCAAGAGCCAGATGTGGATACAGGGAGTGCAGGGCAGCTGACCTCTTTCTCTCTGGGGCCCATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TTGGATCCAGTTGGTGGCCCTGGGAAGCAGGATAGCTaGACTTGGGGACAATCTAGCCAGGAGGGACTCAGG +
Preference number: 3 (lower is better)
Translates to: LDPVGGPGKQDS*TWGQSSQEGLR
Trigger: CCTGAGTCCCTCCTGGCTAGATTGTCCCCAAGTCCAGCTATCCTGCTTCCCAGGGCCACCAACTGGATCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CTGAGATTTGCTGGAGCCTGCACACACCCTGGTCCTTaGATCCAGTTGGTGGCCCTGGGAAGCAGGATAGCT +
Preference number: 3 (lower is better)
Translates to: LRFAGACTHPGP*IQLVALGSRIA
Trigger: AGCTATCCTGCTTCCCAGGGCCACCAACTGGATCCAAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGGAGCGGGCTTTCCTCTaGGAGGCAGCTGGAGCCTTG +
Preference number: 3 (lower is better)
Translates to: AHSEVHTLPLPHALYPMRERAFL*EAAGAL
Trigger: CAAGGCTCCAGCTGCCTCCAAGAGGAAAGCCCGCTC...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp CGTTTTCCTTCCCAGCGAGCAACACCCCCAGCCAGGTaGGAATCCAGTACTGCCTTCTTCCACTCATCCTCC +
Preference number: 3 (lower is better)
Translates to: RFPSQRATPPAR*ESSTAFFHSSS
Trigger: GGAGGATGAGTGGAAGAAGGCAGTACTGGATTCTCACCTGGCTGGGGGTGTTGCTCGCTGGGAAGGAAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp AAAATACTGCCACCCTTGCCTCAAGTCTCACCTTGGTaGCGCTTCGAGGGGCTGGGTGGATCACAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: KILPPLPQVSPW*RFEGLGGSQLW
Trigger: CCAAAGCTGTGATCCACCCAGCCCCTCGAAGCGGCACCAAGGTGAGACTTGAGGCAAGGGTGGCAGTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp GGTACTTATTGCTTTTGGCTGTGCCGTCTGCCTAGATaGCCTCAGGGAGGAGCGTCGGGCTTTTGGGACAGA +
Preference number: 3 (lower is better)
Translates to: GTYCFWLCRLPR*PQGGASGFWDR
Trigger: TCTGTCCCAAAAGCCCGACGCTCCTCCCTGAGGCCATCTAGGCAGACGGCACAGCCAAAAGCAATAAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TCTCACTTCCTTTTGCTCTGGTTGGGTCAGGCCAGGTaGACCACCATGTTCAAGTGGCCTCTGTCCCCATCC +
Preference number: 3 (lower is better)
Translates to: SHFLLLWLGQAR*TTMFKWPLSPS
Trigger: GGATGGGGACAGAGGCCACTTGAACATGGTGGTCCACCTGGCCTGACCCAACCAGAGCAAAAGGAAGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CATTCTTCTGAGATTTGCTGGAGCCTGCACACACCCTaGTCCTTGGATCCAGTTGGTGGCCCTGGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: HSSEICWSLHTP*SLDPVGGPGKQ
Trigger: CTGCTTCCCAGGGCCACCAACTGGATCCAAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAGAAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp CGCTGGTGCCTTCTGGGATGGCCCGATCCTATAACCTaGGGTCCCAGTAGCTCTGCTCTGAATCCTTCTCTA +
Preference number: 3 (lower is better)
Translates to: RWCLLGWPDPIT*GPSSSALNPSL
Trigger: TAGAGAAGGATTCAGAGCAGAGCTACTGGGACCTCAGGTTATAGGATCGGGCCATCCCAGAAGGCACCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp GGAATTGGTTGGGCAGTGGGTGGCTGGCTTGTGGGATaGTCGCTGAGTCTCTTTGAGGGCACAGAGTATAGG +
Preference number: 3 (lower is better)
Translates to: GIGWAVGGWLVG*SLSLFEGTEYR
Trigger: CCTATACTCTGTGCCCTCAAAGAGACTCAGCGATCATCCCACAAGCCAGCCACCCACTGCCCAACCAATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp GCACGGGAACCTCGAGGGATACACATGGGTACTTATTaGTTTTGGCTGTGCCGTCTGCCTAGATGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: AREPRGIHMGTY*FWLCRLPRWPQ
Trigger: CTGAGGCCATCTAGGCAGACGGCACAGCCAAAAGCAATAAGTACCCATGTGTATCCCTCGAGGTTCCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp AGCCCAGGTCCCAATTGCACCCGTCTTCACCTGGCTTaGTCCTGCATACCTGGATTCTTAAGAGTGACAGCC +
Preference number: 3 (lower is better)
Translates to: SPGPNCTRLHLA*SCIPGFLRVTA
Trigger: GGCTGTCACTCTTAAGAATCCAGGTATGCAGGAGCAAGCCAGGTGAAGACGGGTGCAATTGGGACCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp GACACACAGCACATTCTTCTGAGATTTGCTGGAGCCTaGACACACCCTGGTCCTTGGATCCAGTTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: DTQHILLRFAGA*THPGPWIQLVA
Trigger: GGCCACCAACTGGATCCAAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAGAAGAATGTGCTGTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp ATGAGATCCAGTGGTAGACACTGGCTCCCATGTCCCTaGTCTAGTCAAGTCCCATATACCCCACCCCCACCT +
Preference number: 3 (lower is better)
Translates to: MRSSGRHWLPCP*SSQVPYTPPPP
Trigger: AGGTGGGGGTGGGGTATATGGGACTTGACTAGAGCAGGGACATGGGAGCCAGTGTCTACCACTGGATCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp ACCGGGAGATCTCCGCCTCCAGCCCCTGGAGTTATTTaGGTATCTCACTTCCTTTTGCTCTGGTTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: TGRSPPPAPGVI*VSHFLLLWLGQ
Trigger: CTGACCCAACCAGAGCAAAAGGAAGTGAGATACCCAAATAACTCCAGGGGCTGGAGGCGGAGATCTCCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp AGATGGAGACAGACAGATTCCCTTTGGGTATGGATGTaGGAGAGCGGGCTTTCCTCTTGGAGGCAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RWRQTDSLWVWM*ESGLSSWRQLE
Trigger: CTCCAGCTGCCTCCAAGAGGAAAGCCCGCTCTCCCACATCCATACCCAAAGGGAATCTGTCTGTCTCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TGGGCTGTTGAGTTAGACCCTGGGGGCTGTCTTCTGTaGTACATCCCTGCCTATCCAAACCGAGTTTCGCAC +
Preference number: 3 (lower is better)
Translates to: WAVELDPGGCLL*YIPAYPNRVSH
Trigger: GTGCGAAACTCGGTTTGGATAGGCAGGGATGTACCACAGAAGACAGCCCCCAGGGTCTAACTCAACAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TCAAGTCCCATATACCCCACCCCCACCTCGGACCCTTaGCTTGGACTACTGGATAGCCAATGTGGTCTCCAT +
Preference number: 3 (lower is better)
Translates to: SSPIYPTPTSDP*LGLLDSQCGLH
Trigger: ATGGAGACCACATTGGCTATCCAGTAGTCCAAGCCAAGGGTCCGAGGTGGGGGTGGGGTATATGGGACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp AGGAGACTAGGAGTATGTGGCTGTCAGCTCTGCTCCTaGCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCC +
Preference number: 3 (lower is better)
Translates to: RRLGVCGCQLCS*HLRKKLLGVVP
Trigger: GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCTAGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR GCA 72 bp TACACATGGGTACTTATTGCTTTTGGCTGTGCCGTCTaGCTAGATGGCCTCAGGGAGGAGCGTCGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: YTWVLIAFGCAV*LDGLREERRAF
Trigger: AAAAGCCCGACGCTCCTCCCTGAGGCCATCTAGGCAGACGGCACAGCCAAAAGCAATAAGTACCCATGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp GGTCAACGCTTGGACAGGAAGACTGACACCAGGAAGTaGACGGGAACCTCGAGGGATACACATGGGTACTTA +
Preference number: 3 (lower is better)
Translates to: GQRLDRKTDTRK*TGTSRDTHGYL
Trigger: TAAGTACCCATGTGTATCCCTCGAGGTTCCCGTGCACTTCCTGGTGTCAGTCTTCCTGTCCAAGCGTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp CAGCCCCTGGAGTTATTTGGGTATCTCACTTCCTTTTaGTCTGGTTGGGTCAGGCCAGGTGGACCACCATGT +
Preference number: 3 (lower is better)
Translates to: QPLELFGYLTSF*SGWVRPGGPPC
Trigger: ACATGGTGGTCCACCTGGCCTGACCCAACCAGAGCAAAAGGAAGTGAGATACCCAAATAACTCCAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp CTGATAGGGCTGATCTGGCTTGACTCAAATTTCTGGTaGTGGCAGAGCTCAGAGTCCAGAGCTGAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: LIGLIWLDSNFW*WQSSESRAEAG
Trigger: ACCTGCCTCAGCTCTGGACTCTGAGCTCTGCCAGCACCAGAAATTTGAGTCAAGCCAGATCAGCCCTATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp GTTAGACCCTGGGGGCTGTCTTCTGTGGTACATCCCTaGCTATCCAAACCGAGTTTCGCACATCTAAGTGGG +
Preference number: 3 (lower is better)
Translates to: VRPWGLSSVVHP*LSKPSFAHLSG
Trigger: CCCACTTAGATGTGCGAAACTCGGTTTGGATAGGCAGGGATGTACCACAGAAGACAGCCCCCAGGGTCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp AAGGAAGAAGCTGTTAGGTGTGGTCCCCATCCTAGTTaGTGTCCACAGACTTGTCGTGGCTCTCAGGGTCTC +
Preference number: 3 (lower is better)
Translates to: KEEAVRCGPHPS*CPQTCRGSQGL
Trigger: GAGACCCTGAGAGCCACGACAAGTCTGTGGACACCAACTAGGATGGGGACCACACCTAACAGCTTCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CCA 72 bp GAACCTCGAGGGATACACATGGGTACTTATTGCTTTTaGCTGTGCCGTCTGCCTAGATGGCCTCAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: EPRGIHMGTYCF*LCRLPRWPQGG
Trigger: TCCTCCCTGAGGCCATCTAGGCAGACGGCACAGCCAAAAGCAATAAGTACCCATGTGTATCCCTCGAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CACCAGGAAGTGCACGGGAACCTCGAGGGATACACATaGGTACTTATTGCTTTTGGCTGTGCCGTCTGCCTA +
Preference number: 3 (lower is better)
Translates to: HQEVHGNLEGYT*VLIAFGCAVCL
Trigger: TAGGCAGACGGCACAGCCAAAAGCAATAAGTACCCATGTGTATCCCTCGAGGTTCCCGTGCACTTCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp AGAGCTCAGAGTCCAGAGCTGAGGCAGGTAGGTGACTaGTTGGGCATGGGAGGTGATCTGATTGGCTTTTCT +
Preference number: 3 (lower is better)
Translates to: RAQSPELRQVGD*LGMGGDLIGFS
Trigger: AGAAAAGCCAATCAGATCACCTCCCATGCCCAACCAGTCACCTACCTGCCTCAGCTCTGGACTCTGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp ATAGGGCTGATCTGGCTTGACTCAAATTTCTGGTGCTaGCAGAGCTCAGAGTCCAGAGCTGAGGCAGGTAGG +
Preference number: 3 (lower is better)
Translates to: IGLIWLDSNFWC*QSSESRAEAGR
Trigger: CCTACCTGCCTCAGCTCTGGACTCTGAGCTCTGCCAGCACCAGAAATTTGAGTCAAGCCAGATCAGCCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CTTTGGGTATGGATGTGGGAGAGCGGGCTTTCCTCTTaGAGGCAGCTGGAGCCTTGTTTCCCTCGTAAAGTT +
Preference number: 3 (lower is better)
Translates to: LWVWMWESGLSS*RQLEPCFPRKV
Trigger: AACTTTACGAGGGAAACAAGGCTCCAGCTGCCTCCAAGAGGAAAGCCCGCTCTCCCACATCCATACCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAAGTCACTCCTCAGCGTTaGGCTACAAGGCTGTCTGGC +
Preference number: 3 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKVTPQR*ATRLSG
Trigger: GCCAGACAGCCTTGTAGCCAAACGCTGAGGAGTGAC...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp TACAACACCCGACACCCAACTCTTGCTGCGCCCTTCTaGGACGTTGTGTGTCTCTTGTACGCAGGCTTTAAG +
Preference number: 3 (lower is better)
Translates to: YNTRHPTLAAPF*DVVCLLYAGFK
Trigger: CTTAAAGCCTGCGTACAAGAGACACACAACGTCTCAGAAGGGCGCAGCAAGAGTTGGGTGTCGGGTGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp CTTTGCTTCATCAGGAAGACATGCCCGTCACTGTTCTaGGGACAGGGAGGAGGACACTACAGCATTTGGGAC +
Preference number: 3 (lower is better)
Translates to: LCFIRKTCPSLF*GQGGGHYSIWD
Trigger: GTCCCAAATGCTGTAGTGTCCTCCTCCCTGTCCTCAGAACAGTGACGGGCATGTCTTCCTGATGAAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp ACCGCAGCTATGGAAACAAGAGAAGGCAGAAGATCGTaGTGTGCTACGTGTGCTGACGGGTGGATCATGCCA +
Preference number: 3 (lower is better)
Translates to: TAAMETREGRRS*CATCADGWIMP
Trigger: TGGCATGATCCACCCGTCAGCACACGTAGCACATCACGATCTTCTGCCTTCTCTTGTTTCCATAGCTGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp GATGAGCCTTTAGCATCCTACCTGGGACAGGTGGCCTaGCCGCAGCTATGGAAACAAGAGAAGGCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: DEPLASYLGQVA*PQLWKQEKAED
Trigger: ATCTTCTGCCTTCTCTTGTTTCCATAGCTGCGGTCAGGCCACCTGTCCCAGGTAGGATGCTAAAGGCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp GGAACACCATCGCTGTCTGATAGGGCTGATCTGGCTTaGCTCAAATTTCTGGTGCTGGCAGAGCTCAGAGTC +
Preference number: 3 (lower is better)
Translates to: GTPSLSDRADLA*LKFLVLAELRV
Trigger: GACTCTGAGCTCTGCCAGCACCAGAAATTTGAGTCAAGCCAGATCAGCCCTATCAGACAGCGATGGTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp CTACTTCTTTGGGCCAACTTCCTGCCCATGCTCTTCTaGTGGCTTTTAGGTTTCTTCAGGGCCTTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: LLLWANFLPMLF*WLLGFFRALAE
Trigger: CTCAGCCAAGGCCCTGAAGAAACCTAAAAGCCAGCAGAAGAGCATGGGCAGGAAGTTGGCCCAAAGAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp AGCCGCTGCTTGTTTAAGCGTTATGCCCTAGGAGTGTaGCTGATGAAGTGGAGACTCCCTCAGGATCAAGTG +
Preference number: 3 (lower is better)
Translates to: SRCLFKRYALGV*LMKWRLPQDQV
Trigger: CACTTGATCCTGAGGGAGTCTCCACTTCATCAGCCACACTCCTAGGGCATAACGCTTAAACAAGCAGCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CCA 72 bp CTGATTGGCTTTTCTTGTCCCATGGAAGGTGATGGTTaGCAGACCCCTTCACTCCATGTGGAGTCTGTCCAC +
Preference number: 3 (lower is better)
Translates to: LIGFSCPMEGDG*QTPSLHVESVH
Trigger: GTGGACAGACTCCACATGGAGTGAAGGGGTCTGCCAACCATCACCTTCCATGGGACAAGAAAAGCCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TGTCTGATAGGGCTGATCTGGCTTGACTCAAATTTCTaGTGCTGGCAGAGCTCAGAGTCCAGAGCTGAGGCA +
Preference number: 3 (lower is better)
Translates to: CLIGLIWLDSNF*CWQSSESRAEA
Trigger: TGCCTCAGCTCTGGACTCTGAGCTCTGCCAGCACCAGAAATTTGAGTCAAGCCAGATCAGCCCTATCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TTGCATTTGGGCTGCATCCTCTTGGGGTTCTTTCAGTaGGAACACCATCGCTGTCTGATAGGGCTGATCTGG +
Preference number: 3 (lower is better)
Translates to: LHLGCILLGFFQ*EHHRCLIGLIW
Trigger: CCAGATCAGCCCTATCAGACAGCGATGGTGTTCCCACTGAAAGAACCCCAAGAGGATGCAGCCCAAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAAAGGAAAGACACAGAGTaGCTCTCCCAGACCCCCATC +
Preference number: 3 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKRKDTE*LSQTPI
Trigger: GATGGGGGTCTGGGAGAGCAACTCTGTGTCTTTCCT...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp TGTAAACACATGTACCCGGGTCAGGTACATGCGGCCTaGGACTCTGTGTTCCTTTTTAGCCCATGGAGGGTT +
Preference number: 3 (lower is better)
Translates to: CKHMYPGQVHAA*DSVFLFSPWRV
Trigger: AACCCTCCATGGGCTAAAAAGGAACACAGAGTCTCAGGCCGCATGTACCTGACCCGGGTACATGTGTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp GGTGGAGTATGGCTAATATGGTTGGCTTGGCCTCCTTaGAAGATGGAGCAATCCGAATGGCTTTGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: GGVWLIWLAWPP*KMEQSEWLCWQ
Trigger: CTGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCATATTAGCCATACTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp TGTGTGCACTCATGTGCACGTATAAGACATGCACGCTaGTGTGCACTGTCACATGGACAGGAAGGGCTAGAG +
Preference number: 3 (lower is better)
Translates to: CVHSCARIRHAR*CALSHGQEGLE
Trigger: CTCTAGCCCTTCCTGTCCATGTGACAGTGCACATCAGCGTGCATGTCTTATACGTGCACATGAGTGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp ATGGAATGGAGACACACAGCACATTCTTCTGAGATTTaGTGGAGCCTGCACACACCCTGGTCCTTGGATCCA +
Preference number: 3 (lower is better)
Translates to: MEWRHTAHSSEI*WSLHTPWSLDP
Trigger: TGGATCCAAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAGAAGAATGTGCTGTGTGTCTCCATTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp GAGTTATTTGGGTATCTCACTTCCTTTTGCTCTGGTTaGGTCAGGCCAGGTGGACCACCATGTTCAAGTGGC +
Preference number: 3 (lower is better)
Translates to: ELFGYLTSFCSG*VRPGGPPCSSG
Trigger: GCCACTTGAACATGGTGGTCCACCTGGCCTGACCCAACCAGAGCAAAAGGAAGTGAGATACCCAAATAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp AGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTaGATCTTCTCGGGAGAAGGGACAGAGACAAGGCTG +
Preference number: 3 (lower is better)
Translates to: RMLLRLVSSLEM*IFSGEGTETRL
Trigger: CAGCCTTGTCTCTGTCCCTTCTCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp GACACAGAGTTGCTCTCCCAGACCCCCATCACCCACCCATTGCTAGGAACTCCAAGAATACTGAATCATTaGAGCCGCTGCTTGTTTAAG +
Preference number: 3 (lower is better)
Translates to: DTELLSQTPITHPLLGTPRILNH*SRCLFK
Trigger: CTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCT...TGGAGTTCCTAGCAATGGGTGGGTGATGGGGGTCTGGGAGAGCAACTCTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp AGGAAAAAGAGCTCCTATTCCCAGCAACTGTCAGGGTaGGTGGAGCAGGTTAAGGGTGGCTTCCTCATTACT +
Preference number: 3 (lower is better)
Translates to: RKKSSYSQQLSG*VEQVKGGFLIT
Trigger: AGTAATGAGGAAGCCACCCTTAACCTGCTCCACTCACCCTGACAGTTGCTGGGAATAGGAGCTCTTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp GTGAGAAATGGAATGGAGACACACAGCACATTCTTCTaGGATTTGCTGGAGCCTGCACACACCCTGGTCCTT +
Preference number: 3 (lower is better)
Translates to: VRNGMETHSTFF*DLLEPAHTLVL
Trigger: AAGGACCAGGGTGTGTGCAGGCTCCAGCAAATCTCAGAAGAATGTGCTGTGTGTCTCCATTCCATTTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp TTCACACACTACCTCTTCCCCACGCCCTATATCCAATaGGGGAGATGGAGACAGACAGATTCCCTTTGGGTA +
Preference number: 3 (lower is better)
Translates to: FTHYLFPTPYIQ*GRWRQTDSLWV
Trigger: TACCCAAAGGGAATCTGTCTGTCTCCATCTCCCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp GGACAGGAAGGGCTAGAGCCTTCTACTGATGAAGGTTaGACAGGACCCATGAACACAACCCAAAGAAGAGTG +
Preference number: 3 (lower is better)
Translates to: GQEGLEPSTDEG*TGPMNTTQRRV
Trigger: CACTCTTCTTTGGGTTGTGTTCATGGGTCCTGTTCAACCTTCATCAGTAGAAGGCTCTAGCCCTTCCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp GGCTTGAACCTGGACCCAGAATGTTCAAGACACCTGTaGAGACACCCACATGTGCATGAAAGCTGTGAAAAC +
Preference number: 3 (lower is better)
Translates to: GLNLDPECSRHL*RHPHVHESCEN
Trigger: GTTTTCACAGCTTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGTTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp GACATTACCCACTCACACTATAGTAAGAAAACCACATTGCCCTATTGTACCAGAGACACCCACTACTGCTaGGCCAGCCCACTCTCTCAC +
Preference number: 3 (lower is better)
Translates to: DITHSHYSKKTTLPYCTRDTHYC*ASPLSH
Trigger: GTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTC...TCTGGTACAATAGGGCAATGTGGTTTTCTTACTATAGTGTGAGTGGGTAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGTTAAAGTGCGAGATCTaGACACTGTCCCTGGTAGAA +
Preference number: 3 (lower is better)
Translates to: AHSEVHTLPLPHALYPMRLKCEI*TLSLVE
Trigger: TTCTACCAGGGACAGTGTCAAGATCTCGCACTTTAA...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAAGACGTTGTGTGTCTCTaGTACGCAGGCTTTAAGAGA +
Preference number: 3 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKDVVCL*YAGFKR
Trigger: TCTCTTAAAGCCTGCGTACAAGAGACACACAACGTC...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp TGTCTCAGCCCCTTTGCTCCTGTTTTGAGAAAGCTCTaGGGACGGATGGTGAGGCAGAGTCAACTTCTTATT +
Preference number: 3 (lower is better)
Translates to: CLSPFAPVLRKL*GRMVRQSQLLI
Trigger: AATAAGAAGTTGACTCTGCCTCACCATCCGTCCTCAGAGCTTTCTCAAAACAGGAGCAAAGGGGCTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTaGTTGTTTAAGCGTTATGCCCTAGGAGTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: PRYHRILNHLSR*LFKRYALGVWL
Trigger: CAGCCACACTCCTAGGGCATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR GCA 72 bp GCTTACGGCCCAGGGGAAATAGTGCTTGTTTTAAAGTaGGAGATCTTGACACTGTCCCTGGTAGAACCTAGA +
Preference number: 3 (lower is better)
Translates to: AYGPGEIVLVLK*EILTLSLVEPR
Trigger: TCTAGGTTCTACCAGGGACAGTGTCAAGATCTCGCACTTTAAAACAAGCACTATTTCCCCTGGGCCGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp GGACAGCCAGGTCCTACACAAGGCAGAAAGGGCCTTTaGTTACAAGAAAAGTCGCACCAAGTGGTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: GQPGPTQGRKGL*LQEKSHQVVLK
Trigger: TTTAAGAACCACTTGGTGCGACTTTTCTTGTAACCAAAGGCCCTTTCTGCCTTGTGTAGGACCTGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp ATTTCTGGTAACCAGAAAGCACAGTCCTTTAAGATTTaGGAAGGGAAGCAAGCGTCCGAGCTCTGTCTGAGC +
Preference number: 3 (lower is better)
Translates to: ISGNQKAQSFKI*EGKQASELCLS
Trigger: GCTCAGACAGAGCTCGGACGCTTGCTTCCCTTCCCAAATCTTAAAGGACTGTGCTTTCTGGTTACCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp GTCTGTCACTCCTCAGCGTTTGGCTACAAGGCTGTCTaGCCACTGATTTTTGGTAAGACTGTGAGAAATGGA +
Preference number: 3 (lower is better)
Translates to: VCHSSAFGYKAV*PLIFGKTVRNG
Trigger: TCCATTTCTCACAGTCTTACCAAAAATCAGTGGCCAGACAGCCTTGTAGCCAAACGCTGAGGAGTGACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CTGAAATGGACAATTCATGTTGAGAGGCTACTTCTTTaGGCCAACTTCCTGCCCATGCTCTTCTGCTGGCTT +
Preference number: 3 (lower is better)
Translates to: LKWTIHVERLLL*ANFLPMLFCWL
Trigger: AAGCCAGCAGAAGAGCATGGGCAGGAAGTTGGCCCAAAGAAGTAGCCTCTCAACATGAATTGTCCATTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp TCACAAGTCCCTCTCACCACATGCAGAAGACGACACTaGAGTTTTGTTGGTTTCCTTGTGTGTGCACTCATG +
Preference number: 3 (lower is better)
Translates to: SQVPLTTCRRRH*SFVGFLVCALM
Trigger: CATGAGTGCACACACAAGGAAACCAACAAAACTCCAGTGTCGTCTTCTGCATGTGGTGAGAGGGACTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp AAGTCAGACAAAACACAAGAGGGAGGGACAGCCAGGTCCTACACAAGGCAGAAAGGTGAGCAGAAAGGATaGAGTTTAAATTGTCAGCTC +
Preference number: 3 (lower is better)
Translates to: KSDKTQEGGTARSYTRQKGEQKG*SLNCQL
Trigger: GAGCTGACAATTTAAACTCAATCCTTTCTGCTCACC...TTTCTGCCTTGTGTAGGACCTGGCTGTCCCTCCCTCTTGTGTTTTGTCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp CGTGCCAACTGTTGGAACCCTTTCTGGATTGCCAGGTaGGCAGAAAGGATTGAGTTTAAATTGTCAGCTCCT +
Preference number: 3 (lower is better)
Translates to: RANCWNPFWIAR*AERIEFKLSAP
Trigger: AGGAGCTGACAATTTAAACTCAATCCTTTCTGCTCACCTGGCAATCCAGAAAGGGTTCCAACAGTTGGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR GCA 72 bp ATCAGAACCACATTCCAAATTAATACATTCAGGGGCTaGAGATGTAGCGCAGGGTGGAGCACTTGTCTGACA +
Preference number: 3 (lower is better)
Translates to: IRTTFQINTFRG*RCSAGWSTCLT
Trigger: TGTCAGACAAGTGCTCCACCCTGCGCTACATCTGCAGCCCCTGAATGTATTAATTTGGAATGTGGTTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp CAGAATGTTCAAGACACCTGTGCAGACACCCACATGTaGATGAAAGCTGTGAAAACACACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: QNVQDTCADTHM*MKAVKTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTTTTCACAGCTTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CTGTGTACCCATCCCCCTTTGATTCAGTGCAGGCTGTaGTTATTTTACTCGAGACAAAGTTGGCAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: LCTHPPLIQCRL*LFYSRQSWQRN
Trigger: GTTTCTCTGCCAACTTTGTCTCGAGTAAAATAACCACAGCCTGCACTGAATCAAAGGGGGATGGGTACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CAATGGATGTTCAGGACTGACCAAGAACTGGAGACTTaGATGTTCAGAACTGACCAAAGACTGGAGACTTGG +
Preference number: 3 (lower is better)
Translates to: QWMFRTDQELET*MFRTDQRLETW
Trigger: CCAAGTCTCCAGTCTTTGGTCAGTTCTGAACATCCAAGTCTCCAGTTCTTGGTCAGTCCTGAACATCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CCTGCTGAGAAAGGGCTTTGCTACTTTGAGCTGAAATaGACAATTCATGTTGAGAGGCTACTTCTTTGGGCC +
Preference number: 3 (lower is better)
Translates to: PAEKGLCYFELK*TIHVERLLLWA
Trigger: GGCCCAAAGAAGTAGCCTCTCAACATGAATTGTCCATTTCAGCTCAAAGTAGCAAAGCCCTTTCTCAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp CCCACCCTGCTGAGAAAGGGCTTTGCTACTTTGAGCTaGAATGGACAATTCATGTTGAGAGGCTACTTCTTT +
Preference number: 3 (lower is better)
Translates to: PTLLRKGFATLS*NGQFMLRGYFF
Trigger: AAAGAAGTAGCCTCTCAACATGAATTGTCCATTTCAGCTCAAAGTAGCAAAGCCCTTTCTCAGCAGGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp CTCAGGAATGCTCCTGAGCTCAGAGACAAGTTTGCTTaGAGGAGGGTCTTGATTCTAATATTTCTGGTAACC +
Preference number: 3 (lower is better)
Translates to: LRNAPELRDKFA*RRVLILIFLVT
Trigger: GGTTACCAGAAATATTAGAATCAAGACCCTCCTGCAAGCAAACTTGTCTCTGAGCTCAGGAGCATTCCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR GCA 72 bp CACACACACACACACACACACACTCCAAGAAAGAATTaGTTTGAGTTTCCAGTCCCGTTTTGTGGTAATGCC +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTPRKN*FEFPVPFCGNA
Trigger: GGCATTACCACAAAACGGGACTGGAAACTCAAAGCAATTCTTTCTTGGAGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp CTTGTTAGACCATTGGAAATGGGTTGGATAAATGGTTaGCAGGGTCAGAAAAATAGCAAGAGCCGGCTTAGG +
Preference number: 3 (lower is better)
Translates to: LVRPLEMGWING*QGQKNSKSRLR
Trigger: CCTAAGCCGGCTCTTGCTATTTTTCTGACCCTGCCAACCATTTATCCAACCCATTTCCAATGGTCTAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp AGGAATGCTCCTGAGCTCAGAGACAAGTTTGCTTGCAGGAGGGTCTTGATTCTAGATTCAGCTGGCTTTTaGATAGTCCTGTTGATTTCA +
Preference number: 3 (lower is better)
Translates to: RNAPELRDKFACRRVLILDSAGF*IVLLIS
Trigger: TGAAATCAACAGGACTATCAAAAAGCCAGCTGAATC...TAGAATCAAGACCCTCCTGCAAGCAAACTTGTCTCTGAGCTCAGGAGCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CCA 72 bp ATTGTTTCCAATGGATGTTCAGGACTGACCAAGAACTaGAGACTTGGATGTTCAGAACTGACCAAAGACTGG +
Preference number: 3 (lower is better)
Translates to: IVSNGCSGLTKN*RLGCSELTKDW
Trigger: CCAGTCTTTGGTCAGTTCTGAACATCCAAGTCTCCAGTTCTTGGTCAGTCCTGAACATCCATTGGAAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR-3UTR CAA 90 bp ATCTTCCTCCTGCCAACCTGTCAGATACACATACACAAAGTCTGTCTCCAAACGATCTCGTTTGCATATTaGACGCTTATCTTTTCAGTC +
Preference number: 3 (lower is better)
Translates to: IFLLPTCQIHIHKVCLQTISFAY*TLIFSV
Trigger: GACTGAAAAGATAAGCGTCAAATATGCAAACGAGAT...CGTTTGGAGACAGACTTTGTGTATGTGTATCTGACAGGTTGGCAGGAGGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR TCA 72 bp AACCAGATTACCAGGAATTTTAGGGATGGGAGAAACTaGTCAGAACCACATTCCAAATTAATACATTCAGGG +
Preference number: 3 (lower is better)
Translates to: NQITRNFRDGRN*SEPHSKLIHSG
Trigger: CCCTGAATGTATTAATTTGGAATGTGGTTCTGATCAGTTTCTCCCATCCCTAAAATTCCTGGTAATCTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCCGCCACAGCACCTCGTaGGCCAGGCCCCCGACGTTG +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSRHSTS*ARPPTL
Trigger: CAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCG...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCGCTTGCCCAGCCGCGTaGGAGGCAGGCGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSACPAA*EAGGPE
Trigger: CTCTGGACCGCCTGCCTCGCACGCGGCTGGGCAAGC...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GCCGCTGGTGCACGTGACCCGGCACTGTCTCAGCCCCTTTGCTCCTGTTTTGAGCCTCCGGGGCTGTGCTaGCCCCAGACTTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: AAGARDPALSQPLCSCFEPPGLC*PQTCRR
Trigger: TCTCCGGCAAGTCTGGGGGCAGCACAGCCCCGGAGG...CTCAAAACAGGAGCAAAGGGGCTGAGACAGTGCCGGGTCACGTGCACCAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GAGGGGCTGGGTGGATCACAGCTTTGGGCTGTCTGTCACTCCTCAGCGTTTGGCCGGGCGGCAGCGAGCTaGTGGAGCGCGAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: EGLGGSQLWAVCHSSAFGRAAAS*WSASHA
Trigger: AGCATGGCTCGCGCTCCACCAGCTCGCTGCCGCCCG...GCCAAACGCTGAGGAGTGACAGACAGCCCAAAGCTGTGATCCACCCAGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCGTGGAGCGCGAGCCATaGTTCGTCATGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSVEREP*FVMPAG
Trigger: GCCGGCGGGCATGACGAAGCATGGCTCGCGCTCCAC...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp TGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTGGTGGAGCGCGAGCCATaGTTCGTCATGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: WPAHSLTSNPLLQHLPQLVEREP*FVMPAG
Trigger: GCCGGCGGGCATGACGAAGCATGGCTCGCGCTCCAC...CAGCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCGCAGGCGGTCCAGAGTaGGCCACAGCACCTCGTGCG +
Preference number: 4 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSAGGPE*ATAPRA
Trigger: CGCACGAGGTGCTGTGGCGCACTCTGGACCGCCTGC...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTGCAGTCCCGGAGCTTaGCCAGCCGCGTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSCSPGA*PAACEA
Trigger: TGCCTCGCACGCGGCTGGGCAAGCTCCGGGACTGCA...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTCCGAGTTCACGCAGAACTCAGCGGCAGGCAGGCCAAGCATCCCTCCTCCTCGGTGAAGCCCAAGGACTaGAGACCGGTGGAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LRVHAELSGRQAKHPSSSVKPKD*RPVEWR
Trigger: CCGCCACTCCACCGGTCTGCAGTCCTTGGGCTTCAC...CGAGGAGGAGGGATGCTTGGCCTGCCTGCCGCTGAGTTCTGCGTGAACTCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTCCGAGTTCACGCAGAACTCAGCGGCAGGCAGGCCAAGCATCCCTCCTCCTCGATCTCCAGTTCTTCCTaGGGCTGGCTCTGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: LRVHAELSGRQAKHPSSSISSSS*GWLCGA
Trigger: GGCGCCGCAGAGCCAGCCGCAGGAAGAACTGGAGAT...CGAGGAGGAGGGATGCTTGGCCTGCCTGCCGCTGAGTTCTGCGTGAACTCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCCCACCTCCGGGGCTGTaGTGCCCCCAGACTTGCCGG +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPPPPGL*CPQTCR
Trigger: CCGGCAAGTCTGGGGGCAGCACAGCCCCGGAGGTGG...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCCGGGCGGCAGCGAGCTaGTGGAGCGCGAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPRAAAS*WSASHA
Trigger: AGCATGGCTCGCGCTCCACCAGCTCGCTGCCGCCCG...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCGCGAGCACGCCTTGCTaGGCACGATCTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSASTPC*ARSPWA
Trigger: AGCCCATGGAGATCGTGCGCAGCAAGGCGTGCTCGC...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp TGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTGCACAGCCTCCACGTGTaGCAGCTGCGGGTTGTCCGT +
Preference number: 4 (lower is better)
Translates to: WPAHSLTSNPLLQHLPQLHSLHV*QLRVVR
Trigger: ACGGACAACCCGCAGCTGGCACACGTGGAGGCTGTG...CAGCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGATCTCCAGTTCTTCCTaGGGCTGGCTCTGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRISSSS*GWLCGA
Trigger: GGCGCCGCAGAGCCAGCCGCAGGAAGAACTGGAGAT...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCGGCGACTGCAGCCGCTaGGCCTCCTCTGTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSGDCSR*ASSVPK
Trigger: CTTAGGAACAGAGGAGGCGCAGCGGCTGCAGTCGCC...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp GGGTCACAAGCAGGCGGGACGACGCCAGGTCAACGCTaGGACAGGAAGACTGACACCAGGAAGTGCACGGGA +
Preference number: 4 (lower is better)
Translates to: GSQAGGTTPGQR*DRKTDTRKCTG
Trigger: TCCCGTGCACTTCCTGGTGTCAGTCTTCCTGTCCAAGCGTTGACCTGGCGTCGTCCCGCCTGCTTGTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGCTTGCCCAGCCGCGTaGGAGGCAGGCGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSACPAA*EAGGPE
Trigger: CTCTGGACCGCCTGCCTCGCACGCGGCTGGGCAAGC...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGGAGAGTCGTGCGTGTTaGAGTCCCGGAGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRESRAC*SPGACP
Trigger: TGGGCAAGCTCCGGGACTGCAACACGCACGACTCTC...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGCCACGGGGCTGGGCATaGTGCCCATCTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRPRGWA*CPSPVL
Trigger: AAGAACTGGAGATGGGCAGCATGCCCAGCCCCGTGG...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTCCGAGTTCACGCAGAACTCAGCGGCAGGCAGGCCAAGCATCCCTCCTCCTCGTGTGGTTCTCCAGCTTaGATTTCTCTTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LRVHAELSGRQAKHPSSSCGSPA*ISLGPR
Trigger: CCGGGGCCCAAGAGAAATGCAAGCTGGAGAACCACA...CGAGGAGGAGGGATGCTTGGCCTGCCTGCCGCTGAGTTCTGCGTGAACTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GACACAGAGTTGCTCTCCCAGACCCCCATCACCCACCCATTGCTAGGAACTCCACCGAGTGCTCCCGTGTaGTCCTCCCCCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: DTELLSQTPITHPLLGTPPSAPV*SSPRQH
Trigger: ATGCTGCCTGGGGGAGGAGCACACGGGAGCACTCGG...TGGAGTTCCTAGCAATGGGTGGGTGATGGGGGTCTGGGAGAGCAACTCTGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAGCGAGGGGGCGTCCTaGCACTTGCTGTGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSSEGAS*HLLWCR
Trigger: TCTACACCACAGCAAGTGCCAGGACGCCCCCTCGCT...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGCAGGCGGTCCAGAGTaGGCCACAGCACCTCGTGCG +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSAGGPE*ATAPRA
Trigger: CGCACGAGGTGCTGTGGCGCACTCTGGACCGCCTGC...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCTCCACGTGTGCCAGCTaGGGGTTGTCCGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPSTCAS*GLSVLW
Trigger: CCAGAGCACGGACAACCCGCAGCTGGCACACGTGGA...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGCCTCCGGGGCTGTGCTaGCCCCAGACTTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGPPGLC*PQTCRR
Trigger: TCTCCGGCAAGTCTGGGGGCAGCACAGCCCCGGAGG...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATTGCGCACGATCTCCATaGGCTCGGGCGGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHCARSP*ARAAAS
Trigger: GCTCGCTGCCGCCCGAGCCCATGGAGATCGTGCGCA...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGGGTTGTGGGTCTTCATaGAACTCCGGGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRGCGSS*NSGGSP
Trigger: TGGAGAGCCCCCGGAGTTCCATGAAGACCCACAACC...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp CAGCTGCCCTGCACTCCCTGTATCCACATCTGGCTCTaGGATGCCCGGTGGCCTCAAGCGGTTCAAACCTTG +
Preference number: 4 (lower is better)
Translates to: QLPCTPCIHIWL*DARWPQAVQTL
Trigger: CAAGGTTTGAACCGCTTGAGGCCACCGGGCATCCAAGAGCCAGATGTGGATACAGGGAGTGCAGGGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAGGCAGTGTGTTGAGTaGCAGGGCAATGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSRQCVE*QGNGGE
Trigger: CTCTCCACCATTGCCCTGTCACTCAACACACTGCCT...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCGGCTGGAGAAGATCATaGTGCCCATGGCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSGWRRS*CPWRGR
Trigger: TCTTCCTCGCCATGGGCATCATGATCTTCTCCAGCC...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCGTGTTGAGGATGGGTTaGGACTGGGTCTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSVLRMG*DWVLAI
Trigger: GATGGCCAAGACCCAGTCTCAACCCATCCTCAACAC...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCTGGAGCAGAGAGTCGTaGGTGTTGCAGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPWSRES*VLQSRS
Trigger: GCTCCGGGACTGCAACACGCACGACTCTCTGCTCCA...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTGTCCATCATCTCGATaGTCCGGGCGAAGGCATCCT +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSCPSSR*SGRRHP
Trigger: AGGATGCCTTCGCCCGGAGCATCGAGATGATGGACA...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGTGGACGTTCAAGTGCTaGGGACTAGACGAGGACCTG +
Preference number: 4 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRWTFKC*GLDEDL
Trigger: CAGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCA...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCCCGAGTGCTCCCGTGTaGTCCTCCCCCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSPSAPV*SSPRQH
Trigger: ATGCTGCCTGGGGGAGGAGCACACGGGAGCACTCGG...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCCGGAGAGCGCCCTCTTaGTCCATTTCCACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSRRAPS*SISTCW
Trigger: CCAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCG...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCGACTGTGGGAGAATCTaGTGGCTTCAGGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSDCGRI*WLQGSP
Trigger: CGGACTTCCCTGAAGCCACCAGATTCTCCCACAGTC...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCTGCTGTGTGTTTCTCTaGGGAGCGAGGGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPCCVFL*GARGRP
Trigger: AGGACGCCCCCTCGCTCCCCAGAGAAACACACAGCA...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCCTTGGCGGCCACCGATaGGTTGGGCTTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSLGGHR*VGLLQQ
Trigger: CTGCTGGAGAAGCCCAACTCATCGGTGGCCGCCAAG...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCGCTCAGGCAGTGTGTTaGGTGACAGGGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPAQAVC*VTGQWW
Trigger: CCACCATTGCCCTGTCACTCAACACACTGCCTGAGC...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGGGCGCGAGCACGCCTTaGTGCGCACGATCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRGASTP*CARSPW
Trigger: CCATGGAGATCGTGCGCAGCAAGGCGTGCTCGCGCC...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AAGAGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTGGATCTTCTCGGGACGCCACAGCACCTCGTaGGCCAGGCCCCCGACGTTG +
Preference number: 4 (lower is better)
Translates to: KRMLLRLVSSLEMWIFSGRHSTS*ARPPTL
Trigger: CAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCG...TCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AAGTCAGACAAAACACAAGAGGGAGGGACAGCCAGGTCCTACACAAGGCAGAAATGCAGTCCCGGAGCTTaGCCAGCCGCGTGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: KSDKTQEGGTARSYTRQKCSPGA*PAACEA
Trigger: TGCCTCGCACGCGGCTGGGCAAGCTCCGGGACTGCA...TTTCTGCCTTGTGTAGGACCTGGCTGTCCCTCCCTCTTGTGTTTTGTCTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTTCCACGTGTGCCAGCTaGGGGTTGTCCGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPHISHSCSVTAVSWETPSTCAS*GLSVLW
Trigger: CCAGAGCACGGACAACCCGCAGCTGGCACACGTGGA...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTCATGGACACGATGCTaGCGTTCCTCTTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSSWTRC*RSSWLS
Trigger: AGAGAGCCAAGAGGAACGGCAGCATCGTGTCCATGA...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GCCGCTGGTGCACGTGACCCGGCACTGTCTCAGCCCCTTTGCTCCTGTTTTGAGGACAGGTGGTTATCCTaGACCTTGTCCTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: AAGARDPALSQPLCSCFEDRWLS*TLSFLA
Trigger: GGCTAAGAAGGACAAGGTGCAGGATAACCACCTGTC...CTCAAAACAGGAGCAAAGGGGCTGAGACAGTGCCGGGTCACGTGCACCAGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTCCGAGTTCACGCAGAACTCAGCGGCAGGCAGGCCAAGCATCCCTCCTCCTCGTTGCTGTACATGTCTTaGAGCTGCTGGACGTTCAAG +
Preference number: 4 (lower is better)
Translates to: LRVHAELSGRQAKHPSSSLLYMS*SCWTFK
Trigger: CTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAA...CGAGGAGGAGGGATGCTTGGCCTGCCTGCCGCTGAGTTCTGCGTGAACTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CCCAAGTGCAGGGCCAGCTTACGGCCCAGGGGAAATAGTGCTTGTTTTAAAGTGGGCGACTGCAGCCGCTaGGCCTCCTCTGTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: PKCRASLRPRGNSACFKVGDCSR*ASSVPK
Trigger: CTTAGGAACAGAGGAGGCGCAGCGGCTGCAGTCGCC...CACTTTAAAACAAGCACTATTTCCCCTGGGCCGTAAGCTGGCCCTGCACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCATGTCTTGCAGCTGCTaGACGTTCAAGTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSMSCSC*TFKCCG
Trigger: TCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACAT...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCATGTCTTGCAGCTGCTaGACGTTCAAGTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSMSCSC*TFKCCG
Trigger: TCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACAT...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAGCTTCATGGGGTTGTaGGTCTTCATGGAACTCCGG +
Preference number: 4 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSSFMGL*VFMELR
Trigger: CCGGAGTTCCATGAAGACCCACAACCCCATGAAGCT...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp TTGGTGCCGCTTCGAGGGGCTGGGTGGATCACAGCTTaGGGCTGTCTGTCACTCCTCAGCGTTTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: LVPLRGAGWITA*GCLSLLSVWLQ
Trigger: TTGTAGCCAAACGCTGAGGAGTGACAGACAGCCCAAAGCTGTGATCCACCCAGCCCCTCGAAGCGGCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCAGGCGGGGATGCTTTTaGACTTGGTGTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSRRGCF*TWCHPH
Trigger: ATGAGGATGACACCAAGTTCAAAAGCATCCCCGCCT...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGGAGCCTCTCTCCGCTTaGTGGCTTTCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGEPLSA*WLSPGA
Trigger: AGCGCCAGGAGAAAGCCATCAAGCGGAGAGAGGCTC...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCCCCCCGCCTCGAAGTTaGACGCTATTGCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPPPPRS*TLLLCV
Trigger: AACACACAGCAATAGCGTTCAACTTCGAGGCGGGGG...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
57% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGGCGAGCACGCCTTGCTaGGCACGATCTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRASTPC*ARSPWA
Trigger: AGCCCATGGAGATCGTGCGCAGCAAGGCGTGCTCGC...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGGAGAGTCGTGCGTGTTaGAGTCCCGGAGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGESRAC*SPGACP
Trigger: TGGGCAAGCTCCGGGACTGCAACACGCACGACTCTC...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATTGGAGCAGAGAGTCGTaGGTGTTGCAGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHWSRES*VLQSRS
Trigger: GCTCCGGGACTGCAACACGCACGACTCTCTGCTCCA...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGTGGTTTCAAAGGACTTaGTCGAGCTGGTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRWFQRT*SSWSRR
Trigger: TCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCA...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCTGGACGTTCAAGTGCTaGGGACTAGACGAGGACCTG +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPWTFKC*GLDEDL
Trigger: CAGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCA...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGCGGGGCTGGGCATGCTaGCCATCTCCAGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGRGWAC*PSPVLP
Trigger: AGGAAGAACTGGAGATGGGCAGCATGCCCAGCCCCG...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCCCACGGGGCTGGGCATaGTGCCCATCTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSPRGWA*CPSPVL
Trigger: AAGAACTGGAGATGGGCAGCATGCCCAGCCCCGTGG...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp ATCTTCCTCCTGCCAACCTGTCAGATACACATACACAAAGTCTGTCTCCAAACGCCACCTCCGGGGCTGTaGTGCCCCCAGACTTGCCGG +
Preference number: 4 (lower is better)
Translates to: IFLLPTCQIHIHKVCLQTPPPGL*CPQTCR
Trigger: CCGGCAAGTCTGGGGGCAGCACAGCCCCGGAGGTGG...CGTTTGGAGACAGACTTTGTGTATGTGTATCTGACAGGTTGGCAGGAGGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp AGGAATGCTCCTGAGCTCAGAGACAAGTTTGCTTGCAGGAGGGTCTTGATTCTAGCGGCAGCGAGCTGGTaGAGCGCGAGCCATGCTTCG +
Preference number: 4 (lower is better)
Translates to: RNAPELRDKFACRRVLILAAASW*SASHAS
Trigger: CGAAGCATGGCTCGCGCTCCACCAGCTCGCTGCCGC...TAGAATCAAGACCCTCCTGCAAGCAAACTTGTCTCTGAGCTCAGGAGCATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp ACAGCAGCTGGAGGTCACATAGGGGTCACAAGTCCCTCTCACCACATGCAGAAGAGGCAGTGTGTTGAGTaGCAGGGCAATGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TAAGGHIGVTSPSHHMQKRQCVE*QGNGGE
Trigger: CTCTCCACCATTGCCCTGTCACTCAACACACTGCCT...CTTCTGCATGTGGTGAGAGGGACTTGTGACCCCTATGTGACCTCCAGCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp ACAGCAGCTGGAGGTCACATAGGGGTCACAAGTCCCTCTCACCACATGCAGAAGCCATCTCCTTGGTGTTaGGGATGGGTTGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: TAAGGHIGVTSPSHHMQKPSPWC*GWVETG
Trigger: CCCAGTCTCAACCCATCCTCAACACCAAGGAGATGG...CTTCTGCATGTGGTGAGAGGGACTTGTGACCCCTATGTGACCTCCAGCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AAGTCAGACAAAACACAAGAGGGAGGGACAGCCAGGTCCTACACAAGGCAGAAAGTGAAGCCCAAGGACTaGAGACCGGTGGAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KSDKTQEGGTARSYTRQKVKPKD*RPVEWR
Trigger: CCGCCACTCCACCGGTCTGCAGTCCTTGGGCTTCAC...TTTCTGCCTTGTGTAGGACCTGGCTGTCCCTCCCTCTTGTGTTTTGTCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGCGGGGCTGGGCATGCTaGCCATCTCCAGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRRGWAC*PSPVLP
Trigger: AGGAAGAACTGGAGATGGGCAGCATGCCCAGCCCCG...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGGGGGAGCTCTCGAAGTaGTTCTTTTCTGTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRGELSK*FFSVLA
Trigger: AGCTAGAACAGAAAAGAACCACTTCGAGAGCTCCCC...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp CCCGACACCCAACTCTTGCTGCGCCCTTCTGAGACGTaGTGTGTCTCTTGTACGCAGGCTTTAAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: PDTQLLLRPSET*CVSCTQALRDP
Trigger: GGGATCTCTTAAAGCCTGCGTACAAGAGACACACAACGTCTCAGAAGGGCGCAGCAAGAGTTGGGTGTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp CCAGCCCCTGGAGTTATTTGGGTATCTCACTTCCTTTaGCTCTGGTTGGGTCAGGCCAGGTGGACCACCATG +
Preference number: 4 (lower is better)
Translates to: PAPGVIWVSHFL*LWLGQARWTTM
Trigger: CATGGTGGTCCACCTGGCCTGACCCAACCAGAGCAAAAGGAAGTGAGATACCCAAATAACTCCAGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp GACCGGGAGATCTCCGCCTCCAGCCCCTGGAGTTATTaGGGTATCTCACTTCCTTTTGCTCTGGTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: DREISASSPWSY*GISLPFALVGS
Trigger: TGACCCAACCAGAGCAAAAGGAAGTGAGATACCCAAATAACTCCAGGGGCTGGAGGCGGAGATCTCCCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp ATGCTCTTCTGCTGGCTTTTAGGTTTCTTCAGGGCCTaGGCTGAGACGGACAGAGGTAGGGCTAGACGCGGA +
Preference number: 4 (lower is better)
Translates to: MLFCWLLGFFRA*AETDRGRARRG
Trigger: TCCGCGTCTAGCCCTACCTCTGTCCGTCTCAGCCAAGGCCCTGAAGAAACCTAAAAGCCAGCAGAAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGGGCTGGAGAAGATCATaGTGCCCATGGCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGGWRRS*CPWRGR
Trigger: TCTTCCTCGCCATGGGCATCATGATCTTCTCCAGCC...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AAGAGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTGGATCTTCTCGGGACACAGCCTCCACGTGTaGCAGCTGCGGGTTGTCCGT +
Preference number: 4 (lower is better)
Translates to: KRMLLRLVSSLEMWIFSGHSLHV*QLRVVR
Trigger: ACGGACAACCCGCAGCTGGCACACGTGGAGGCTGTG...TCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGCTTGCCGGAGAGGGATaGCAGAGGACTGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRLAGEG*QRTVGE
Trigger: TTCTCCCACAGTCCTCTGGCATCCCTCTCCGGCAAG...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp ATGGTTGGCTTGGCCTCCTTGAAAGATGGAGCAATCCGAATGGCTTTGCTGGCACTTGCCGGAGAGGGATaGCAGAGGACTGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: MVGLASLKDGAIRMALLALAGEG*QRTVGE
Trigger: TTCTCCCACAGTCCTCTGGCATCCCTCTCCGGCAAG...TGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGGGGCGTCCTGGCACTTaGTGTGGTGTAGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRGRPGT*CGVDGG
Trigger: TCCTCCATCTACACCACAGCAAGTGCCAGGACGCCC...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp ATGGTTGGCTTGGCCTCCTTGAAAGATGGAGCAATCCGAATGGCTTTGCTGGCAGGGCGTCCTGGCACTTaGTGTGGTGTAGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: MVGLASLKDGAIRMALLAGRPGT*CGVDGG
Trigger: TCCTCCATCTACACCACAGCAAGTGCCAGGACGCCC...TGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTCTCAGACTAAAGCCCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCCCCCAGGCAGCATGTaGACATCGGGGGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLRLKPQIPQNTESFEPLPPGSM*TSGEVW
Trigger: CCACACCTCCCCCGATGTGCACATGCTGCCTGGGGG...CAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGGGCTTTAGTCTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GACACAGAGTTGCTCTCCCAGACCCCCATCACCCACCCATTGCTAGGAACTCCACATCCTTCATGTTCATaGACACGATGCTGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: DTELLSQTPITHPLLGTPHPSCS*TRCCRS
Trigger: GGAACGGCAGCATCGTGTCCATGAACATGAAGGATG...TGGAGTTCCTAGCAATGGGTGGGTGATGGGGGTCTGGGAGAGCAACTCTGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCGAGATCCCTGCTCCTTaGTTTCAAAGGACTTGCTCG +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPEIPAP*FQRTCS
Trigger: CGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTC...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCTGTGGGAGAATCTGGTaGCTTCAGGGAAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSCGRIW*LQGSPW
Trigger: CCACGGACTTCCCTGAAGCCACCAGATTCTCCCACA...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATTCCTGGCACTTGCTGTaGTGTAGATGGAGGACTCCG +
Preference number: 4 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHSWHLL*CRWRTP
Trigger: CGGAGTCCTCCATCTACACCACAGCAAGTGCCAGGA...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CCCAAGTGCAGGGCCAGCTTACGGCCCAGGGGAAATAGTGCTTGTTTTAAAGTGTCCTGGCACTTGCTGTaGTGTAGATGGAGGACTCCG +
Preference number: 4 (lower is better)
Translates to: PKCRASLRPRGNSACFKVSWHLL*CRWRTP
Trigger: CGGAGTCCTCCATCTACACCACAGCAAGTGCCAGGA...CACTTTAAAACAAGCACTATTTCCCCTGGGCCGTAAGCTGGCCCTGCACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp GCTCAGAGTCCAGAGCTGAGGCAGGTAGGTGACTGGTaGGGCATGGGAGGTGATCTGATTGGCTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: AQSPELRQVGDW*GMGGDLIGFSC
Trigger: ACAAGAAAAGCCAATCAGATCACCTCCCATGCCCAACCAGTCACCTACCTGCCTCAGCTCTGGACTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGGTGTTGAGGATGGGTTaGGACTGGGTCTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: AHSEVHTLPLPHALYPMRVLRMG*DWVLAI
Trigger: GATGGCCAAGACCCAGTCTCAACCCATCCTCAACAC...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCTGTTCATGGACACGATaGTGCCGTTCCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSCSWTR*CRSSWL
Trigger: GAGCCAAGAGGAACGGCAGCATCGTGTCCATGAACA...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCTTGCTGTACATGTCTTaGAGCTGCTGGACGTTCAAG +
Preference number: 4 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPLLYMS*SCWTFK
Trigger: CTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAA...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GCTCACTCTGAAGTTCACACACTACCTCTTCCCCACGCCCTATATCCAATGAGGTGTGGTTCTCCAGCTTaGATTTCTCTTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AHSEVHTLPLPHALYPMRCGSPA*ISLGPR
Trigger: CCGGGGCCCAAGAGAAATGCAAGCTGGAGAACCACA...CCTCATTGGATATAGGGCGTGGGGAAGAGGTAGTGTGTGAACTTCAGAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATGCGGCAGCGAGCTGGTaGAGCGCGAGCCATGCTTCG +
Preference number: 4 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYAAASW*SASHAS
Trigger: CGAAGCATGGCTCGCGCTCCACCAGCTCGCTGCCGC...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCCGTAGTAGGGCAGGATaGCCAGTAAGTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSRSRAG*PVSQWR
Trigger: ACGCCATTGACTTACTGGCCATCCTGCCCTACTACG...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATCGTAGTAGGGCAGGATaGCCAGTAAGTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHRSRAG*PVSQWR
Trigger: ACGCCATTGACTTACTGGCCATCCTGCCCTACTACG...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGGTTATTGACGATAATTaGAATGGGGAGGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRVIDDN*NGEGNH
Trigger: GTGATTGCCCTCCCCATTCCAATTATCGTCAATAAC...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp ATGGTTGGCTTGGCCTCCTTGAAAGATGGAGCAATCCGAATGGCTTTGCTGGCACGGAGAGCGCCCTCTTaGTCCATTTCCACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: MVGLASLKDGAIRMALLARRAPS*SISTCW
Trigger: CCAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCG...TGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp CATGTTCAAGTGGCCTCTGTCCCCATCCCCTGGCTCTaGTCTTCACTGCTGAGACCCATCTGTCAGATTCAT +
Preference number: 4 (lower is better)
Translates to: HVQVASVPIPWL*SSLLRPICQIH
Trigger: ATGAATCTGACAGATGGGTCTCAGCAGTGAAGACAAGAGCCAGGGGATGGGGACAGAGGCCACTTGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTAGAGCCTCTCTCCGCTTaGTGGCTTTCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVEPLSA*WLSPGA
Trigger: AGCGCCAGGAGAAAGCCATCAAGCGGAGAGAGGCTC...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CCCAAGTGCAGGGCCAGCTTACGGCCCAGGGGAAATAGTGCTTGTTTTAAAGTGTGGTTTCAAAGGACTTaGTCGAGCTGGTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: PKCRASLRPRGNSACFKVWFQRT*SSWSRR
Trigger: TCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCA...CACTTTAAAACAAGCACTATTTCCCCTGGGCCGTAAGCTGGCCCTGCACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGATGATGCGGAAGATCTaGACCACACGGCGCACATTC +
Preference number: 4 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRMMRKI*TTRRTF
Trigger: GAATGTGCGCCGTGTGGTCCAGATCTTCCGCATCAT...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATCATCCTTCATGTTCATaGACACGATGCTGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHHPSCS*TRCCRS
Trigger: GGAACGGCAGCATCGTGTCCATGAACATGAAGGATG...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTAAGCGAGGGGGCGTCCTaGCACTTGCTGTGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVSEGAS*HLLWCR
Trigger: TCTACACCACAGCAAGTGCCAGGACGCCCCCTCGCT...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATCTTGGCGGCCACCGATaGGTTGGGCTTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYLGGHR*VGLLQQ
Trigger: CTGCTGGAGAAGCCCAACTCATCGGTGGCCGCCAAG...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp ATCAAATGTGGGCATCACTGTGACTCTAAATATGGTCATAGGCGAGATGACATTCCCCCAGGCAGCATGTaGACATCGGGGGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: IKCGHHCDSKYGHRRDDIPPGSM*TSGEVW
Trigger: CCACACCTCCCCCGATGTGCACATGCTGCCTGGGGG...AATGTCATCTCGCCTATGACCATATTTAGAGTCACAGTGATGCCCACATTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAAATGATGCGGAAGATCTaGACCACACGGCGCACATTC +
Preference number: 4 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKMMRKI*TTRRTF
Trigger: GAATGTGCGCCGTGTGGTCCAGATCTTCCGCATCAT...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTATGCTGCCGTTCCTCTTaGCTCTCTCCAGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVCCRSS*LSPEPL
Trigger: GAGAGGCTCTGGAGAGAGCCAAGAGGAACGGCAGCA...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp ATCTTCCTCCTGCCAACCTGTCAGATACACATACACAAAGTCTGTCTCCAAACGTGCTGCCGTTCCTCTTaGCTCTCTCCAGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: IFLLPTCQIHIHKVCLQTCCRSS*LSPEPL
Trigger: GAGAGGCTCTGGAGAGAGCCAAGAGGAACGGCAGCA...CGTTTGGAGACAGACTTTGTGTATGTGTATCTGACAGGTTGGCAGGAGGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGGAGATCCCTGCTCCTTaGTTTCAAAGGACTTGCTCG +
Preference number: 4 (lower is better)
Translates to: RSMWLSALLLPSKEEAVREIPAP*FQRTCS
Trigger: CGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTC...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATGTTGAGACTGGGTCTTaGCCATCTTGCTGTACATGT +
Preference number: 4 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHVETGS*PSCCTC
Trigger: ACATGTACAGCAAGATGGCCAAGACCCAGTCTCAAC...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CCCAAGTGCAGGGCCAGCTTACGGCCCAGGGGAAATAGTGCTTGTTTTAAAGTGGTTGAGACTGGGTCTTaGCCATCTTGCTGTACATGT +
Preference number: 4 (lower is better)
Translates to: PKCRASLRPRGNSACFKVVETGS*PSCCTC
Trigger: ACATGTACAGCAAGATGGCCAAGACCCAGTCTCAAC...CACTTTAAAACAAGCACTATTTCCCCTGGGCCGTAAGCTGGCCCTGCACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp TGCTACTTTAAAGTCAGACAAAACACAAGAGGGAGGGACAGCCAGGTCCTACACGACTGTGGGAGAATCTaGTGGCTTCAGGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: CYFKVRQNTRGRDSQVLHDCGRI*WLQGSP
Trigger: CGGACTTCCCTGAAGCCACCAGATTCTCCCACAGTC...GTGTAGGACCTGGCTGTCCCTCCCTCTTGTGTTTTGTCTGACTTTAAAGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTTCTCAGACTAAAGCCCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGGGTTGTGGGTCTTCATaGAACTCCGGGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLRLKPQIPQNTESFEPLGCGSS*NSGGSP
Trigger: TGGAGAGCCCCCGGAGTTCCATGAAGACCCACAACC...CAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGGGCTTTAGTCTGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGGGAGCTCTCGAAGTaGTTCTTTTCTGTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSGELSK*FFSVLA
Trigger: AGCTAGAACAGAAAAGAACCACTTCGAGAGCTCCCC...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp GGAGTTATTTGGGTATCTCACTTCCTTTTGCTCTGGTaGGGTCAGGCCAGGTGGACCACCATGTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GVIWVSHFLLLW*GQARWTTMFKW
Trigger: CCACTTGAACATGGTGGTCCACCTGGCCTGACCCAACCAGAGCAAAAGGAAGTGAGATACCCAAATAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp TTTCCAGTCCCGTTTTGTGGTAATGCCAAGGCCTATTaGTGCACTACTCAGCCTCCCTGGGAATACCTGGGA +
Preference number: 4 (lower is better)
Translates to: FPVPFCGNAKAY*CTTQPPWEYLG
Trigger: TCCCAGGTATTCCCAGGGAGGCTGAGTAGTGCACAAATAGGCCTTGGCATTACCACAAAACGGGACTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTACCATCTCCTTGGTGTTaGGGATGGGTTGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVPSPWC*GWVETG
Trigger: CCCAGTCTCAACCCATCCTCAACACCAAGGAGATGG...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CTTCTCAGACTAAAGCCCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGTGTCCATCATCTCGATaGTCCGGGCGAAGGCATCCT +
Preference number: 4 (lower is better)
Translates to: LLRLKPQIPQNTESFEPLCPSSR*SGRRHP
Trigger: AGGATGCCTTCGCCCGGAGCATCGAGATGATGGACA...CAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGGGCTTTAGTCTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTTCTCAGGAGATCCCTaGTCCTTGGTTTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRFSGDP*SLVSKD
Trigger: GTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGAA...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGTCCATTTCCACTTGTTaGGAGACAGGTGGTTATCCT +
Preference number: 4 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGSISTC*ETGGYP
Trigger: AGGATAACCACCTGTCTCCCAACAAGTGGAAATGGA...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTATGTGGGAGAATCTGGTaGCTTCAGGGAAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVCGRIW*LQGSPW
Trigger: CCACGGACTTCCCTGAAGCCACCAGATTCTCCCACA...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp AAGAGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTGGATCTTCTCGGGAAGCTTCATGGGGTTGTaGGTCTTCATGGAACTCCGG +
Preference number: 4 (lower is better)
Translates to: KRMLLRLVSSLEMWIFSGSFMGL*VFMELR
Trigger: CCGGAGTTCCATGAAGACCCACAACCCCATGAAGCT...TCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CTTCTCAGACTAAAGCCCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGTTGCTGTGGTGTAGATaGAGGACTCCGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLRLKPQIPQNTESFEPLLLWCR*RTPGSA
Trigger: TGCTGAGCCCGGAGTCCTCCATCTACACCACAGCAA...CAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGGGCTTTAGTCTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATTGCTGTGTGTTTCTCTaGGGAGCGAGGGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYCCVFL*GARGRP
Trigger: AGGACGCCCCCTCGCTCCCCAGAGAAACACACAGCA...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp TGGTGGAGTATGGCTAATATGGTTGGCTTGGCCTCCTaGAAAGATGGAGCAATCCGAATGGCTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WWSMANMVGLAS*KDGAIRMALLA
Trigger: TGCCAGCAAAGCCATTCGGATTGCTCCATCTTTCAAGGAGGCCAAGCCAACCATATTAGCCATACTCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp TCCCTCTCACCACATGCAGAAGACGACACTGGAGTTTaGTTGGTTTCCTTGTGTGTGCACTCATGTGCACGT +
Preference number: 4 (lower is better)
Translates to: SLSPHAEDDTGV*LVSLCVHSCAR
Trigger: ACGTGCACATGAGTGCACACACAAGGAAACCAACAAAACTCCAGTGTCGTCTTCTGCATGTGGTGAGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AAGAGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTGGATCTTCTCGGGAGGGTCTTGGCCATCTTaGTGTACATGTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRMLLRLVSSLEMWIFSGGSWPS*CTCLAA
Trigger: AGCTGCAAGACATGTACAGCAAGATGGCCAAGACCC...TCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp CCCAAGTGCAGGGCCAGCTTACGGCCCAGGGGAAATAGTGCTTGTTTTAAAGTGGTTATTGACGATAATTaGAATGGGGAGGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: PKCRASLRPRGNSACFKVVIDDN*NGEGNH
Trigger: GTGATTGCCCTCCCCATTCCAATTATCGTCAATAAC...CACTTTAAAACAAGCACTATTTCCCCTGGGCCGTAAGCTGGCCCTGCACTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATCCCCCGCCTCGAAGTTaGACGCTATTGCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYPPPRS*TLLLCV
Trigger: AACACACAGCAATAGCGTTCAACTTCGAGGCGGGGG...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATTCATGGACACGATGCTaGCGTTCCTCTTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYSWTRC*RSSWLS
Trigger: AGAGAGCCAAGAGGAACGGCAGCATCGTGTCCATGA...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTATTCTCAGGAGATCCCTaGTCCTTGGTTTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVFSGDP*SLVSKD
Trigger: GTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGAA...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp GGAACCCTTTCTGGATTGCCAGGTGAGCAGAAAGGATaGAGTTTAAATTGTCAGCTCCTCCTGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GTLSGLPGEQKG*SLNCQLLLTAS
Trigger: AGAAGCTGTCAGGAGGAGCTGACAATTTAAACTCAATCCTTTCTGCTCACCTGGCAATCCAGAAAGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp CTTGGCTGCGTGCCAACTGTTGGAACCCTTTCTGGATaGCCAGGTGAGCAGAAAGGATTGAGTTTAAATTGT +
Preference number: 4 (lower is better)
Translates to: LGCVPTVGTLSG*PGEQKGLSLNC
Trigger: ACAATTTAAACTCAATCCTTTCTGCTCACCTGGCAATCCAGAAAGGGTTCCAACAGTTGGCACGCAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp CTCTCACCACATGCAGAAGACGACACTGGAGTTTTGTaGGTTTCCTTGTGTGTGCACTCATGTGCACGTATA +
Preference number: 4 (lower is better)
Translates to: LSPHAEDDTGVL*VSLCVHSCARI
Trigger: TATACGTGCACATGAGTGCACACACAAGGAAACCAACAAAACTCCAGTGTCGTCTTCTGCATGTGGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR TCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATAGGCGGGGATGCTTTTaGACTTGGTGTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYRRGCF*TWCHPH
Trigger: ATGAGGATGACACCAAGTTCAAAAGCATCCCCGCCT...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp GACATTACCCACTCACACTATAGTAAGAAAACCACATTGCCCTATTGTACCAGATGTTCATGGACACGATaGTGCCGTTCCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: DITHSHYSKKTTLPYCTRCSWTR*CRSSWL
Trigger: GAGCCAAGAGGAACGGCAGCATCGTGTCCATGAACA...TCTGGTACAATAGGGCAATGTGGTTTTCTTACTATAGTGTGAGTGGGTAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATGACAGGTGGTTATCCTaGACCTTGTCCTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYDRWLS*TLSFLA
Trigger: GGCTAAGAAGGACAAGGTGCAGGATAACCACCTGTC...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR GCA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATGGGTCTTGGCCATCTTaGTGTACATGTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYGSWPS*CTCLAA
Trigger: AGCTGCAAGACATGTACAGCAAGATGGCCAAGACCC...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CCA 90 bp ATCTTCCTCCTGCCAACCTGTCAGATACACATACACAAAGTCTGTCTCCAAACGTCCATTTCCACTTGTTaGGAGACAGGTGGTTATCCT +
Preference number: 4 (lower is better)
Translates to: IFLLPTCQIHIHKVCLQTSISTC*ETGGYP
Trigger: AGGATAACCACCTGTCTCCCAACAAGTGGAAATGGA...CGTTTGGAGACAGACTTTGTGTATGTGTATCTGACAGGTTGGCAGGAGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp AGATACCACAGAATACTGAATCATTTGAGCCGCTGCTaGTTTAAGCGTTATGCCCTAGGAGTGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: RYHRILNHLSRC*FKRYALGVWLM
Trigger: CATCAGCCACACTCCTAGGGCATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
3UTR CAA 72 bp ACCAGAATATTAAATTTGCATTTGGGCTGCATCCTCTaGGGGTTCTTTCAGTGGGAACACCATCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TRILNLHLGCIL*GFFQWEHHRCL
Trigger: CAGACAGCGATGGTGTTCCCACTGAAAGAACCCCAAGAGGATGCAGCCCAAATGCAAATTTAATATTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp GACATTACCCACTCACACTATAGTAAGAAAACCACATaGCCCTATTGTACCAGAGACAGGCTGACCAACAAC +
Preference number: 4 (lower is better)
Translates to: DITHSHYSKKTT*PYCTRDRLTNN
Trigger: GTTGTTGGTCAGCCTGTCTCTGGTACAATAGGGCAATGTGGTTTTCTTACTATAGTGTGAGTGGGTAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp GGGAGGAAAGACAATCCAACCACCAGAATATTAAATTaGCATTTGGGCTGCATCCTCTTGGGGTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GRKDNPTTRILN*HLGCILLGFFQ
Trigger: CTGAAAGAACCCCAAGAGGATGCAGCCCAAATGCAAATTTAATATTCTGGTGGTTGGATTGTCTTTCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp CCTTCCAAATTCAGTTCAAGTCACCATCTGGAAATTTaGAGAGGAATTCTAGGACAAGGAGAGAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PSKFSSSHHLEI*RGILGQGEKVR
Trigger: TCTGACCTTCTCTCCTTGTCCTAGAATTCCTCTCAAAATTTCCAGATGGTGACTTGAACTGAATTTGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
3UTR CAA 72 bp AATGGAAAACTCTTCTTTTGCTTCGTCTATACTGTTTaGATGGTTGTCTCTATAGGAGTTCTGTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: NGKLFFCFVYTV*MVVSIGVLSDS
Trigger: AGAGTCTGACAGAACTCCTATAGAGACAACCATCAAAACAGTATAGACGAAGCAAAAGAAGAGTTTTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS GCA 90 bp AGCCGCGTGCGAGGCAGGCGGTCCAGAGTGCGCCACAGCACCTCGTaGGCCAGGCCCCCGACGTTGAGGCGCACCCGGCGCGAGCACGCC +
Preference number: 5 (lower is better)
Translates to: SRVRGRRSRVRHSTS*ARPPTLRRTRREHA
Trigger: GGCGTGCTCGCGCCGGGTGCGCCTCAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCGCACTCTGGACCGCCTGCCTCGCACGCGGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS TCA 90 bp GGTCCAGAGTGCGCCACAGCACCTCGTGCGCCAGGCCCCCGACGTTaGGGCGCACCCGGCGCGAGCACGCCTTGCTGCGCACGATCTCCA +
Preference number: 5 (lower is better)
Translates to: GPECATAPRAPGPRR*GAPGASTPCCARSP
Trigger: TGGAGATCGTGCGCAGCAAGGCGTGCTCGCGCCGGGTGCGCCTCAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCGCACTCTGGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 90 bp CGCCCTCTGTGCGCGTGGGCAGAGGGGCCACGGGGCTGGGCATGCTaGCCATCTCCAGTTCTTCCTGCGGCTGGCTCTGCGGCGCCATCT +
Preference number: 5 (lower is better)
Translates to: RPLCAWAEGPRGWAC*PSPVLPAAGSAAPS
Trigger: AGATGGCGCCGCAGAGCCAGCCGCAGGAAGAACTGGAGATGGGCAGCATGCCCAGCCCCGTGGCCCCTCTGCCCACGCGCACAGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CTCCGAGTTCACGCAGAACTCAGCGGCAGGCAGGCCAAGCATCCCTCCTCCTCGCGGCGCGAGCACGCCTaGCTGCGCACGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: LRVHAELSGRQAKHPSSSRREHA*LRTISM
Trigger: CATGGAGATCGTGCGCAGCAAGGCGTGCTCGCGCCG...CGAGGAGGAGGGATGCTTGGCCTGCCTGCCGCTGAGTTCTGCGTGAACTCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 90 bp AGAGGGGCCACGGGGCTGGGCATGCTGCCCATCTCCAGTTCTTCCTaGGGCTGGCTCTGCGGCGCCATCTCCTTGGTGTTGAGGATGGGT +
Preference number: 5 (lower is better)
Translates to: RGATGLGMLPISSSS*GWLCGAISLVLRMG
Trigger: ACCCATCCTCAACACCAAGGAGATGGCGCCGCAGAGCCAGCCGCAGGAAGAACTGGAGATGGGCAGCATGCCCAGCCCCGTGGCCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CTCCGAGTTCACGCAGAACTCAGCGGCAGGCAGGCCAAGCATCCCTCCTCCTCGAGAGAGTCGTGCGTGTaGCAGTCCCGGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: LRVHAELSGRQAKHPSSSRESCV*QSRSLP
Trigger: GGGCAAGCTCCGGGACTGCAACACGCACGACTCTCT...CGAGGAGGAGGGATGCTTGGCCTGCCTGCCGCTGAGTTCTGCGTGAACTCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 90 bp GCTGTGCTGCCCCCAGACTTGCCGGAGAGGGATGCCAGAGGACTGTaGGAGAATCTGGTGGCTTCAGGGAAGTCCGTGGCGCAGCTGATG +
Preference number: 5 (lower is better)
Translates to: AVLPPDLPERDARGL*ENLVASGKSVAQLM
Trigger: CATCAGCTGCGCCACGGACTTCCCTGAAGCCACCAGATTCTCCCACAGTCCTCTGGCATCCCTCTCCGGCAAGTCTGGGGGCAGCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCGTGCTGCCCCCAGACTaGCCGGAGAGGGATGCCAGA +
Preference number: 5 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSVLPPD*PERDAR
Trigger: TCTGGCATCCCTCTCCGGCAAGTCTGGGGGCAGCAC...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CTCCGAGTTCACGCAGAACTCAGCGGCAGGCAGGCCAAGCATCCCTCCTCCTCGATGCTGCCGTTCCTCTaGGCTCTCTCCAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: LRVHAELSGRQAKHPSSSMLPFL*ALSRAS
Trigger: AGAGGCTCTGGAGAGAGCCAAGAGGAACGGCAGCAT...CGAGGAGGAGGGATGCTTGGCCTGCCTGCCGCTGAGTTCTGCGTGAACTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGGGGGCGTCCTGGCACTaGCTGTGGTGTAGATGGAGG +
Preference number: 5 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRGASWH*LWCRWR
Trigger: CCTCCATCTACACCACAGCAAGTGCCAGGACGCCCC...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCCTCCCGTGGAGACTCTaGGGAGGACTGGAGTCCACG +
Preference number: 5 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSLPWRL*GGLEST
Trigger: CGTGGACTCCAGTCCTCCCAAGAGTCTCCACGGGAG...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCTTGCAGTCCCGGAGCTaGCCCAGCCGCGTGCGAGGC +
Preference number: 5 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSLQSRS*PSRVRG
Trigger: GCCTCGCACGCGGCTGGGCAAGCTCCGGGACTGCAA...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 90 bp GTGGACCCCCGCCTCGAAGTTGAACGCTATTGCTGTGTGTTTCTCTaGGGAGCGAGGGGGCGTCCTGGCACTTGCTGTGGTGTAGATGGA +
Preference number: 5 (lower is better)
Translates to: VDPRLEVERYCCVFL*GARGRPGTCCGVDG
Trigger: TCCATCTACACCACAGCAAGTGCCAGGACGCCCCCTCGCTCCCCAGAGAAACACACAGCAATAGCGTTCAACTTCGAGGCGGGGGTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCCTCCCGTGGAGACTCTaGGGAGGACTGGAGTCCACG +
Preference number: 5 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPLPWRL*GGLEST
Trigger: CGTGGACTCCAGTCCTCCCAAGAGTCTCCACGGGAG...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AAGTCAGACAAAACACAAGAGGGAGGGACAGCCAGGTCCTACACAAGGCAGAAATTGCAGTCCCGGAGCTaGCCCAGCCGCGTGCGAGGC +
Preference number: 5 (lower is better)
Translates to: KSDKTQEGGTARSYTRQKLQSRS*PSRVRG
Trigger: GCCTCGCACGCGGCTGGGCAAGCTCCGGGACTGCAA...TTTCTGCCTTGTGTAGGACCTGGCTGTCCCTCCCTCTTGTGTTTTGTCTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS TCA 90 bp CCAGTTCTTCCTGCGGCTGGCTCTGCGGCGCCATCTCCTTGGTGTTaGGGATGGGTTGAGACTGGGTCTTGGCCATCTTGCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: PVLPAAGSAAPSPWC*GWVETGSWPSCCTC
Trigger: ACATGTACAGCAAGATGGCCAAGACCCAGTCTCAACCCATCCTCAACACCAAGGAGATGGCGCCGCAGAGCCAGCCGCAGGAAGAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 90 bp AAGTGCTGCGGACTAGACGAGGACCTGGCCTTCTCAGGAGATCCCTaGTCCTTGGTTTCAAAGGACTTGCTCGAGCTGGTCTCGGAGAGC +
Preference number: 5 (lower is better)
Translates to: KCCGLDEDLAFSGDP*SLVSKDLLELVSES
Trigger: GCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGAAGGCCAGGTCCTCGTCTAGTCCGCAGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 90 bp GCCATCTTGCTGTACATGTCTTGCAGCTGCTGGACGTTCAAGTGCTaGGGACTAGACGAGGACCTGGCCTTCTCAGGAGATCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AILLYMSCSCWTFKC*GLDEDLAFSGDPCS
Trigger: GGAGCAGGGATCTCCTGAGAAGGCCAGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 90 bp CCCTCCAGGAAGTTAACCTTGAGCGCTCGCAGCTTCATGGGGTTGTaGGTCTTCATGGAACTCCGGGGGCTCTCCACGAAGAAACCAGAG +
Preference number: 5 (lower is better)
Translates to: PSRKLTLSARSFMGL*VFMELRGLSTKKPE
Trigger: CTCTGGTTTCTTCGTGGAGAGCCCCCGGAGTTCCATGAAGACCCACAACCCCATGAAGCTGCGAGCGCTCAAGGTTAACTTCCTGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp TGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTGTTGGTTTCAAAGGACTaGCTCGAGCTGGTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: WPAHSLTSNPLLQHLPQLLVSKD*LELVSE
Trigger: CTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAA...CAGCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTGGGTCTTGGCCATCTaGCTGTACATGTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LGQPTLSLATPCSNTCLSWVLAI*LYMSCS
Trigger: GCTGCAAGACATGTACAGCAAGATGGCCAAGACCCA...GCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CAACCCCACATTTCCCACAGCTGCTCTGTAACCGCAGTGTCATGGGAAACACCTGGGGCGTCCTGGCACTaGCTGTGGTGTAGATGGAGG +
Preference number: 5 (lower is better)
Translates to: QPHISHSCSVTAVSWETPGASWH*LWCRWR
Trigger: CCTCCATCTACACCACAGCAAGTGCCAGGACGCCCC...AGGTGTTTCCCATGACACTGCGGTTACAGAGCAGCTGTGGGAAATGTGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS GCA 90 bp ACCTGGCCTTCTCAGGAGATCCCTGCTCCTTGGTTTCAAAGGACTTaGTCGAGCTGGTCTCGGAGAGCGCCCTCTTGGTCCATTTCCACT +
Preference number: 5 (lower is better)
Translates to: TWPSQEIPAPWFQRT*SSWSRRAPSWSIST
Trigger: AGTGGAAATGGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGAAGGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 90 bp TTGGCCATCTTGCTGTACATGTCTTGCAGCTGCTGGACGTTCAAGTaGTGCGGACTAGACGAGGACCTGGCCTTCTCAGGAGATCCCTGC +
Preference number: 5 (lower is better)
Translates to: LAILLYMSCSCWTFK*CGLDEDLAFSGDPC
Trigger: GCAGGGATCTCCTGAGAAGGCCAGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAGATGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGTCAGCACAGCACGTGTaGTCGAACTCCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGSAQHV*SNSSPS
Trigger: GGAGGGCGAGGAGTTCGACAACACGTGCTGTGCTGA...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGAAGAACTTCCATTTCTaGGGCGAGGACAGGAACCTC +
Preference number: 5 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRKNFHF*GEDRNL
Trigger: GAGGTTCCTGTCCTCGCCCAAGAAATGGAAGTTCTT...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp TGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTGAGTAAGTCAATGGCGTaGAGGGGGCCCTTAAAGAAC +
Preference number: 5 (lower is better)
Translates to: WPAHSLTSNPLLQHLPQLSKSMA*RGPLKN
Trigger: GTTCTTTAAGGGCCCCCTCAACGCCATTGACTTACT...CAGCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp TGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCAACACCTGCCTCAGCTGGTCCATTTCCACTTGTaGGGAGACAGGTGGTTATCC +
Preference number: 5 (lower is better)
Translates to: WPAHSLTSNPLLQHLPQLVHFHL*GDRWLS
Trigger: GGATAACCACCTGTCTCCCAACAAGTGGAAATGGAC...CAGCTGAGGCAGGTGTTGGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCGGCAGGCTTGCTGTACATGTCTaGCAGCTGCTGGACGTTCAA +
Preference number: 5 (lower is better)
Translates to: CVCVGSLGLRVHAELSGRLAVHV*QLLDVQ
Trigger: TTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAG...CCTGCCGCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 90 bp TCTCAGGAGATCCCTGCTCCTTGGTTTCAAAGGACTTGCTCGAGCTaGTCTCGGAGAGCGCCCTCTTGGTCCATTTCCACTTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SQEIPAPWFQRTCSS*SRRAPSWSISTCWE
Trigger: CTCCCAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTACGGCGCGAGCACGCCTaGCTGCGCACGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVRREHA*LRTISM
Trigger: CATGGAGATCGTGCGCAGCAAGGCGTGCTCGCGCCG...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GGACACCCACTACTGCTTGGCCAGCCCACTCTCTCACTAGCAACCCCTTGCTCCGGGATGCTTTTGAACTaGGTGTCATCCTCATCCTTC +
Preference number: 5 (lower is better)
Translates to: GHPLLLGQPTLSLATPCSGMLLN*VSSSSF
Trigger: GAAGGATGAGGATGACACCAAGTTCAAAAGCATCCC...GGAGCAAGGGGTTGCTAGTGAGAGAGTGGGCTGGCCAAGCAGTAGTGGGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGAGAGCCTCTCTCCGCTaGATGGCTTTCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRRASLR*MAFSWR
Trigger: GCGCCAGGAGAAAGCCATCAAGCGGAGAGAGGCTCT...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AAGAGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTGGATCTTCTCGGGAGTGCTGCCCCCAGACTaGCCGGAGAGGGATGCCAGA +
Preference number: 5 (lower is better)
Translates to: KRMLLRLVSSLEMWIFSGVLPPD*PERDAR
Trigger: TCTGGCATCCCTCTCCGGCAAGTCTGGGGGCAGCAC...TCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATGTGTGGTTCTCCAGCTaGCATTTCTCTTGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHVWFSS*HFSWAP
Trigger: CGGGGCCCAAGAGAAATGCAAGCTGGAGAACCACAC...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 90 bp TCGGAGAGCGCCCTCTTGGTCCATTTCCACTTGTTGGGAGACAGGTaGTTATCCTGCACCTTGTCCTTCTTAGCCACGCCCTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: SESALLVHFHLLGDR*LSCTLSFLATPSPF
Trigger: AAATGGAGAGGGCGTGGCTAAGAAGGACAAGGTGCAGGATAACCACCTGTCTCCCAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 90 bp TGGTTTCAAAGGACTTGCTCGAGCTGGTCTCGGAGAGCGCCCTCTTaGTCCATTTCCACTTGTTGGGAGACAGGTGGTTATCCTGCACCT +
Preference number: 5 (lower is better)
Translates to: WFQRTCSSWSRRAPS*SISTCWETGGYPAP
Trigger: AGGTGCAGGATAACCACCTGTCTCCCAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCAAGAACTTCCATTTCTaGGGCGAGGACAGGAACCTC +
Preference number: 5 (lower is better)
Translates to: GCQLCSCHLRKKLLGVVPKNFHF*GEDRNL
Trigger: GAGGTTCCTGTCCTCGCCCAAGAAATGGAAGTTCTT...GGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GAAAATTGTGTGTGTGTGGGGTCCTTGGGTCTCCGAGTTCACGCAGAACTCAGCTCGGAGAGCGCCCTCTaGGTCCATTTCCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: ENCVCVGSLGLRVHAELSSESAL*VHFHLL
Trigger: CAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCGA...GCTGAGTTCTGCGTGAACTCGGAGACCCAAGGACCCCACACACACACAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTGTGGTCCCCATACCCCCGCCTCGAAGTaGAACGCTATTGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LSALLLPSKEEAVRCGPHTPASK*NAIAVC
Trigger: ACACACAGCAATAGCGTTCAACTTCGAGGCGGGGGT...ATGGGGACCACACCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGACCCCCGCCTCGAAGTaGAACGCTATTGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGTPASK*NAIAVC
Trigger: ACACACAGCAATAGCGTTCAACTTCGAGGCGGGGGT...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AGGAGTATGTGGCTGTCAGCTCTGCTCCTGCCATCTAAGGAAGAAGCTGTTAGGTCGGAGAGCGCCCTCTaGGTCCATTTCCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: RSMWLSALLLPSKEEAVRSESAL*VHFHLL
Trigger: CAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCGA...CCTAACAGCTTCTTCCTTAGATGGCAGGAGCAGAGCTGACAGCCACATACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGTGGGTCTTGGCCATCTaGCTGTACATGTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGWVLAI*LYMSCS
Trigger: GCTGCAAGACATGTACAGCAAGATGGCCAAGACCCA...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTATCAGCACAGCACGTGTaGTCGAACTCCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVSAQHV*SNSSPS
Trigger: GGAGGGCGAGGAGTTCGACAACACGTGCTGTGCTGA...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp ACAGCAGCTGGAGGTCACATAGGGGTCACAAGTCCCTCTCACCACATGCAGAAGGGGATGCTTTTGAACTaGGTGTCATCCTCATCCTTC +
Preference number: 5 (lower is better)
Translates to: TAAGGHIGVTSPSHHMQKGMLLN*VSSSSF
Trigger: GAAGGATGAGGATGACACCAAGTTCAAAAGCATCCC...CTTCTGCATGTGGTGAGAGGGACTTGTGACCCCTATGTGACCTCCAGCTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTAAGAGCCTCTCTCCGCTaGATGGCTTTCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVRASLR*MAFSWR
Trigger: GCGCCAGGAGAAAGCCATCAAGCGGAGAGAGGCTCT...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AAGAGGATGCTGTTGCGTCTTGTTTCCTCCTTAGAGATGTGGATCTTCTCGGGAGTGTGGTTCTCCAGCTaGCATTTCTCTTGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: KRMLLRLVSSLEMWIFSGVWFSS*HFSWAP
Trigger: CGGGGCCCAAGAGAAATGCAAGCTGGAGAACCACAC...TCCCGAGAAGATCCACATCTCTAAGGAGGAAACAAGACGCAACAGCATCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTAATGCTGCCGTTCCTCTaGGCTCTCTCCAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVMLPFL*ALSRAS
Trigger: AGAGGCTCTGGAGAGAGCCAAGAGGAACGGCAGCAT...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp ACCTGGACCCAGAATGTTCAAGACACCTGTGCAGACACCCACATGTGCATGAAATTGGTTTCAAAGGACTaGCTCGAGCTGGTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: TWTQNVQDTCADTHMCMKLVSKD*LELVSE
Trigger: CTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAA...TTTCATGCACATGTGGGTGTCTGCACAGGTGTCTTGAACATTCTGGGTCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp AGAGAACTTCCTCTCATAGTAGGTGTGTTCCCTACCACACCACAGCAGAAAGTAGAGGCGGGGATGCTTTaGAACTTGGTGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: RELPLIVGVFPTTPQQKVEAGML*NLVSSS
Trigger: TGAGGATGACACCAAGTTCAAAAGCATCCCCGCCTC...TACTTTCTGCTGTGGTGTGGTAGGGAACACACCTACTATGAGAGGAAGTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp ATCTTCCTCCTGCCAACCTGTCAGATACACATACACAAAGTCTGTCTCCAAACGGAGGCGGGGATGCTTTaGAACTTGGTGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: IFLLPTCQIHIHKVCLQTEAGML*NLVSSS
Trigger: TGAGGATGACACCAAGTTCAAAAGCATCCCCGCCTC...CGTTTGGAGACAGACTTTGTGTATGTGTATCTGACAGGTTGGCAGGAGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp GAAGTGGAGACTCCCTCAGGATCAAGTGTCCTCTGTACCCCTCTAACAAGAGGGAACTCGGAGAAGTTATaGACGATAATTGGAATGGGG +
Preference number: 5 (lower is better)
Translates to: EVETPSGSSVLCTPLTRGNSEKL*TIIGMG
Trigger: CCCCATTCCAATTATCGTCAATAACTTCTCCGAGTT...CCCTCTTGTTAGAGGGGTACAGAGGACACTTGATCCTGAGGGAGTCTCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATAGTAAGTCAATGGCGTaGAGGGGGCCCTTAAAGAAC +
Preference number: 5 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYSKSMA*RGPLKN
Trigger: GTTCTTTAAGGGCCCCCTCAACGCCATTGACTTACT...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGCTTGTTTAAGCGTTATCTTGCTGTACATGTCTaGCAGCTGCTGGACGTTCAA +
Preference number: 5 (lower is better)
Translates to: PRYHRILNHLSRCLFKRYLAVHV*QLLDVQ
Trigger: TTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAG...ATAACGCTTAAACAAGCAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS-3UTR CAA 90 bp CTTCTCAGACTAAAGCCCCAGATACCACAGAATACTGAATCATTTGAGCCGCTGAACTCGGAGAAGTTATaGACGATAATTGGAATGGGG +
Preference number: 5 (lower is better)
Translates to: LLRLKPQIPQNTESFEPLNSEKL*TIIGMG
Trigger: CCCCATTCCAATTATCGTCAATAACTTCTCCGAGTT...CAGCGGCTCAAATGATTCAGTATTCTGTGGTATCTGGGGCTTTAGTCTGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp CGAGGCAGGCGGTCCAGAGTGCGCCACAGCACCTCGTaGGCCAGGCCCCCGACGTTGAGGCGCACCCGGCGC +
Preference number: 6 (lower is better)
Translates to: RGRRSRVRHSTS*ARPPTLRRTRR
Trigger: GCGCCGGGTGCGCCTCAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCGCACTCTGGACCGCCTGCCTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp GTGCGCCACAGCACCTCGTGCGCCAGGCCCCCGACGTaGAGGCGCACCCGGCGCGAGCACGCCTTGCTGCGC +
Preference number: 6 (lower is better)
Translates to: VRHSTSCARPPT*RRTRREHALLR
Trigger: GCGCAGCAAGGCGTGCTCGCGCCGGGTGCGCCTCAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS TCA 72 bp TGCGCCACAGCACCTCGTGCGCCAGGCCCCCGACGTTaGGGCGCACCCGGCGCGAGCACGCCTTGCTGCGCA +
Preference number: 6 (lower is better)
Translates to: CATAPRAPGPRR*GAPGASTPCCA
Trigger: TGCGCAGCAAGGCGTGCTCGCGCCGGGTGCGCCTCAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp GCTTGCCCAGCCGCGTGCGAGGCAGGCGGTCCAGAGTaGGCCACAGCACCTCGTGCGCCAGGCCCCCGACGT +
Preference number: 6 (lower is better)
Translates to: ACPAACEAGGPE*ATAPRAPGPRR
Trigger: ACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCGCACTCTGGACCGCCTGCCTCGCACGCGGCTGGGCAAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp CCCGGCGCGAGCACGCCTTGCTGCGCACGATCTCCATaGGCTCGGGCGGCAGCGAGCTGGTGGAGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: PGASTPCCARSP*ARAAASWWSAS
Trigger: GCTCGCGCTCCACCAGCTCGCTGCCGCCCGAGCCCATGGAGATCGTGCGCAGCAAGGCGTGCTCGCGCCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp CCCCCGACGTTGAGGCGCACCCGGCGCGAGCACGCCTaGCTGCGCACGATCTCCATGGGCTCGGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: PPTLRRTRREHA*LRTISMGSGGS
Trigger: GCTGCCGCCCGAGCCCATGGAGATCGTGCGCAGCAAGGCGTGCTCGCGCCGGGTGCGCCTCAACGTCGGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 90 bp TGCGCCAGGCCCCCGACGTTGAGGCGCACCCGGCGCGAGCACGCCTaGCTGCGCACGATCTCCATGGGCTCGGGCGGCAGCGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: CARPPTLRRTRREHA*LRTISMGSGGSELV
Trigger: CACCAGCTCGCTGCCGCCCGAGCCCATGGAGATCGTGCGCAGCAAGGCGTGCTCGCGCCGGGTGCGCCTCAACGTCGGGGGCCTGGCGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 90 bp CGGTCCAGAGTGCGCCACAGCACCTCGTGCGCCAGGCCCCCGACGTaGAGGCGCACCCGGCGCGAGCACGCCTTGCTGCGCACGATCTCC +
Preference number: 6 (lower is better)
Translates to: RSRVRHSTSCARPPT*RRTRREHALLRTIS
Trigger: GGAGATCGTGCGCAGCAAGGCGTGCTCGCGCCGGGTGCGCCTCAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCGCACTCTGGACCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp GCACGATCTCCATGGGCTCGGGCGGCAGCGAGCTGGTaGAGCGCGAGCCATGCTTCGTCATGCCCGCCGGCA +
Preference number: 6 (lower is better)
Translates to: ARSPWARAAASW*SASHASSCPPA
Trigger: TGCCGGCGGGCATGACGAAGCATGGCTCGCGCTCCACCAGCTCGCTGCCGCCCGAGCCCATGGAGATCGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp TGCGCACGATCTCCATGGGCTCGGGCGGCAGCGAGCTaGTGGAGCGCGAGCCATGCTTCGTCATGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: CARSPWARAAAS*WSASHASSCPP
Trigger: CGGCGGGCATGACGAAGCATGGCTCGCGCTCCACCAGCTCGCTGCCGCCCGAGCCCATGGAGATCGTGCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp CGCCCTCTGTGCGCGTGGGCAGAGGGGCCACGGGGCTaGGCATGCTGCCCATCTCCAGTTCTTCCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: RPLCAWAEGPRG*ACCPSPVLPAA
Trigger: AGCCGCAGGAAGAACTGGAGATGGGCAGCATGCCCAGCCCCGTGGCCCCTCTGCCCACGCGCACAGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp ACGGGGCTGGGCATGCTGCCCATCTCCAGTTCTTCCTaGGGCTGGCTCTGCGGCGCCATCTCCTTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: TGLGMLPISSSS*GWLCGAISLVL
Trigger: CAACACCAAGGAGATGGCGCCGCAGAGCCAGCCGCAGGAAGAACTGGAGATGGGCAGCATGCCCAGCCCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp CGGGGCTGTGCTGCCCCCAGACTTGCCGGAGAGGGATaGCAGAGGACTGTGGGAGAATCTGGTGGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RGCAAPRLAGEG*QRTVGESGGFR
Trigger: CCTGAAGCCACCAGATTCTCCCACAGTCCTCTGGCATCCCTCTCCGGCAAGTCTGGGGGCAGCACAGCCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp ACGAAGAAACCAGAGCGGCTGGCCTCGGGGATGGGGTaGGTCTCCATGAGTCTCCCGCCGCTGGCACCCAGA +
Preference number: 6 (lower is better)
Translates to: TKKPERLASGMG*VSMSLPPLAPR
Trigger: TCTGGGTGCCAGCGGCGGGAGACTCATGGAGACCAACCCCATCCCCGAGGCCAGCCGCTCTGGTTTCTTCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS TCA 72 bp GCAGCCGCTGCGCCTCCTCTGTTCCTAAGAGGATCGTaGTACAAGCCCAGAGCCGGTAGCAGCGGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: AAAAPPLFLRGS*YKPRAGSSGVG
Trigger: TCCCACCCCGCTGCTACCGGCTCTGGGCTTGTATCACGATCCTCTTAGGAACAGAGGAGGCGCAGCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS TCA 72 bp CCTGCGGCTGGCTCTGCGGCGCCATCTCCTTGGTGTTaGGGATGGGTTGAGACTGGGTCTTGGCCATCTTGC +
Preference number: 6 (lower is better)
Translates to: PAAGSAAPSPWC*GWVETGSWPSC
Trigger: GCAAGATGGCCAAGACCCAGTCTCAACCCATCCTCAACACCAAGGAGATGGCGCCGCAGAGCCAGCCGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp CTGGGCATGCTGCCCATCTCCAGTTCTTCCTGCGGCTaGCTCTGCGGCGCCATCTCCTTGGTGTTGAGGATG +
Preference number: 6 (lower is better)
Translates to: LGMLPISSSSCG*LCGAISLVLRM
Trigger: CATCCTCAACACCAAGGAGATGGCGCCGCAGAGCCAGCCGCAGGAAGAACTGGAGATGGGCAGCATGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp AGCGAGGGGGCGTCCTGGCACTTGCTGTGGTGTAGATaGAGGACTCCGGGCTCAGCACGGGCTTGTCTAAGA +
Preference number: 6 (lower is better)
Translates to: SEGASWHLLWCR*RTPGSARACLR
Trigger: TCTTAGACAAGCCCGTGCTGAGCCCGGAGTCCTCCATCTACACCACAGCAAGTGCCAGGACGCCCCCTCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp TTGCTGTGTGTTTCTCTGGGGAGCGAGGGGGCGTCCTaGCACTTGCTGTGGTGTAGATGGAGGACTCCGGGC +
Preference number: 6 (lower is better)
Translates to: LLCVSLGSEGAS*HLLWCRWRTPG
Trigger: GCCCGGAGTCCTCCATCTACACCACAGCAAGTGCCAGGACGCCCCCTCGCTCCCCAGAGAAACACACAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 90 bp CTATTGCTGTGTGTTTCTCTGGGGAGCGAGGGGGCGTCCTGGCACTaGCTGTGGTGTAGATGGAGGACTCCGGGCTCAGCACGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: LLLCVSLGSEGASWH*LWCRWRTPGSARAC
Trigger: ACAAGCCCGTGCTGAGCCCGGAGTCCTCCATCTACACCACAGCAAGTGCCAGGACGCCCCCTCGCTCCCCAGAGAAACACACAGCAATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp TGGGGCTGGTACTCCCGTGGAGACTCTTGGGAGGACTaGAGTCCACGCTGTAGAGCAGCTGACCCTCGTCAT +
Preference number: 6 (lower is better)
Translates to: WGWYSRGDSWED*SPRCRAADPRH
Trigger: ATGACGAGGGTCAGCTGCTCTACAGCGTGGACTCCAGTCCTCCCAAGAGTCTCCACGGGAGTACCAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 90 bp AGAGCCGGTAGCAGCGGGGTGGGATCGCCCTCCAGGAAGTTAACCTaGAGCGCTCGCAGCTTCATGGGGTTGTGGGTCTTCATGGAACTC +
Preference number: 6 (lower is better)
Translates to: RAGSSGVGSPSRKLT*SARSFMGLWVFMEL
Trigger: GAGTTCCATGAAGACCCACAACCCCATGAAGCTGCGAGCGCTCAAGGTTAACTTCCTGGAGGGCGATCCCACCCCGCTGCTACCGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp GCATGTGCACATCGGGGGAGGTGTGGTTCTCCAGCTTaGATTTCTCTTGGGCCCCGGGACCTTTCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: ACAHRGRCGSPA*ISLGPRDLSQV
Trigger: TACCTGGGAAAGGTCCCGGGGCCCAAGAGAAATGCAAGCTGGAGAACCACACCTCCCCCGATGTGCACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp CGCCTCGAAGTTGAACGCTATTGCTGTGTGTTTCTCTaGGGAGCGAGGGGGCGTCCTGGCACTTGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: RLEVERYCCVFL*GARGRPGTCCG
Trigger: ACCACAGCAAGTGCCAGGACGCCCCCTCGCTCCCCAGAGAAACACACAGCAATAGCGTTCAACTTCGAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp AGCATGTGCACATCGGGGGAGGTGTGGTTCTCCAGCTaGCATTTCTCTTGGGCCCCGGGACCTTTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: SMCTSGEVWFSS*HFSWAPGPFPG
Trigger: ACCTGGGAAAGGTCCCGGGGCCCAAGAGAAATGCAAGCTGGAGAACCACACCTCCCCCGATGTGCACATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 90 bp GACCTGGCCTTCTCAGGAGATCCCTGCTCCTTGGTTTCAAAGGACTaGCTCGAGCTGGTCTCGGAGAGCGCCCTCTTGGTCCATTTCCAC +
Preference number: 6 (lower is better)
Translates to: DLAFSGDPCSLVSKD*LELVSESALLVHFH
Trigger: GTGGAAATGGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGAAGGCCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 90 bp TCGCCCTCCAGGAAGTTAACCTTGAGCGCTCGCAGCTTCATGGGGTaGTGGGTCTTCATGGAACTCCGGGGGCTCTCCACGAAGAAACCA +
Preference number: 6 (lower is better)
Translates to: SPSRKLTLSARSFMG*WVFMELRGLSTKKP
Trigger: TGGTTTCTTCGTGGAGAGCCCCCGGAGTTCCATGAAGACCCACAACCCCATGAAGCTGCGAGCGCTCAAGGTTAACTTCCTGGAGGGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp TCTCAGGAGATCCCTGCTCCTTGGTTTCAAAGGACTTaGTCGAGCTGGTCTCGGAGAGCGCCCTCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: SQEIPAPWFQRT*SSWSRRAPSWS
Trigger: GGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp AGGAAGTTAACCTTGAGCGCTCGCAGCTTCATGGGGTaGTGGGTCTTCATGGAACTCCGGGGGCTCTCCACG +
Preference number: 6 (lower is better)
Translates to: RKLTLSARSFMG*WVFMELRGLST
Trigger: CGTGGAGAGCCCCCGGAGTTCCATGAAGACCCACAACCCCATGAAGCTGCGAGCGCTCAAGGTTAACTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp ACGAGGACCTGGCCTTCTCAGGAGATCCCTGCTCCTTaGTTTCAAAGGACTTGCTCGAGCTGGTCTCGGAGA +
Preference number: 6 (lower is better)
Translates to: TRTWPSQEIPAP*FQRTCSSWSRR
Trigger: TCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGAAGGCCAGGTCCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp AAGTTAACCTTGAGCGCTCGCAGCTTCATGGGGTTGTaGGTCTTCATGGAACTCCGGGGGCTCTCCACGAAG +
Preference number: 6 (lower is better)
Translates to: KLTLSARSFMGL*VFMELRGLSTK
Trigger: CTTCGTGGAGAGCCCCCGGAGTTCCATGAAGACCCACAACCCCATGAAGCTGCGAGCGCTCAAGGTTAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp TTCTCAGGAGATCCCTGCTCCTTGGTTTCAAAGGACTaGCTCGAGCTGGTCTCGGAGAGCGCCCTCTTGGTC +
Preference number: 6 (lower is better)
Translates to: FSGDPCSLVSKD*LELVSESALLV
Trigger: GACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 90 bp GAGGATGGGTTGAGACTGGGTCTTGGCCATCTTGCTGTACATGTCTaGCAGCTGCTGGACGTTCAAGTGCTGCGGACTAGACGAGGACCT +
Preference number: 6 (lower is better)
Translates to: EDGLRLGLGHLAVHV*QLLDVQVLRTRRGP
Trigger: AGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAGATGGCCAAGACCCAGTCTCAACCCATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp CTGTACATGTCTTGCAGCTGCTGGACGTTCAAGTGCTaGGGACTAGACGAGGACCTGGCCTTCTCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: LYMSCSCWTFKC*GLDEDLAFSGD
Trigger: ATCTCCTGAGAAGGCCAGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp TTGCTGTACATGTCTTGCAGCTGCTGGACGTTCAAGTaGTGCGGACTAGACGAGGACCTGGCCTTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: LLYMSCSCWTFK*CGLDEDLAFSG
Trigger: TCCTGAGAAGGCCAGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp TGGGTCTTGGCCATCTTGCTGTACATGTCTTGCAGCTaGTGGACGTTCAAGTGCTGCGGACTAGACGAGGAC +
Preference number: 6 (lower is better)
Translates to: WVLAILLYMSCS*WTFKCCGLDED
Trigger: GTCCTCGTCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAGATGGCCAAGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp GCCCTCTTGGTCCATTTCCACTTGTTGGGAGACAGGTaGTTATCCTGCACCTTGTCCTTCTTAGCCACGCCC +
Preference number: 6 (lower is better)
Translates to: ALLVHFHLLGDR*LSCTLSFLATP
Trigger: GGGCGTGGCTAAGAAGGACAAGGTGCAGGATAACCACCTGTCTCCCAACAAGTGGAAATGGACCAAGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp AGGACTTGCTCGAGCTGGTCTCGGAGAGCGCCCTCTTaGTCCATTTCCACTTGTTGGGAGACAGGTGGTTAT +
Preference number: 6 (lower is better)
Translates to: RTCSSWSRRAPS*SISTCWETGGY
Trigger: ATAACCACCTGTCTCCCAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp ATCCCTGCTCCTTGGTTTCAAAGGACTTGCTCGAGCTaGTCTCGGAGAGCGCCCTCTTGGTCCATTTCCACT +
Preference number: 6 (lower is better)
Translates to: IPAPWFQRTCSS*SRRAPSWSIST
Trigger: AGTGGAAATGGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp GTCTTGGCCATCTTGCTGTACATGTCTTGCAGCTGCTaGACGTTCAAGTGCTGCGGACTAGACGAGGACCTG +
Preference number: 6 (lower is better)
Translates to: VLAILLYMSCSC*TFKCCGLDEDL
Trigger: CAGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAGATGGCCAAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp AAGGACTTGCTCGAGCTGGTCTCGGAGAGCGCCCTCTaGGTCCATTTCCACTTGTTGGGAGACAGGTGGTTA +
Preference number: 6 (lower is better)
Translates to: KDLLELVSESAL*VHFHLLGDRWL
Trigger: TAACCACCTGTCTCCCAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp TCGGTGTCTATGTACTGGTGGACCCCCGCCTCGAAGTaGAACGCTATTGCTGTGTGTTTCTCTGGGGAGCGA +
Preference number: 6 (lower is better)
Translates to: SVSMYWWTPASK*NAIAVCFSGER
Trigger: TCGCTCCCCAGAGAAACACACAGCAATAGCGTTCAACTTCGAGGCGGGGGTCCACCAGTACATAGACACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 90 bp TTGGTTTCAAAGGACTTGCTCGAGCTGGTCTCGGAGAGCGCCCTCTaGGTCCATTTCCACTTGTTGGGAGACAGGTGGTTATCCTGCACC +
Preference number: 6 (lower is better)
Translates to: LVSKDLLELVSESAL*VHFHLLGDRWLSCT
Trigger: GGTGCAGGATAACCACCTGTCTCCCAACAAGTGGAAATGGACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp TTGAGACTGGGTCTTGGCCATCTTGCTGTACATGTCTaGCAGCTGCTGGACGTTCAAGTGCTGCGGACTAGA +
Preference number: 6 (lower is better)
Translates to: LRLGLGHLAVHV*QLLDVQVLRTR
Trigger: TCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAGATGGCCAAGACCCAGTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp AAGTGGTTCTTTTCTGTTCTAGCTCCAAGGCTGAACTaGGGGCTGGTACTCCCGTGGAGACTCTTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: KWFFSVLAPRLN*GLVLPWRLLGG
Trigger: TCCTCCCAAGAGTCTCCACGGGAGTACCAGCCCCAAGTTCAGCCTTGGAGCTAGAACAGAAAAGAACCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS GCA 72 bp CTCCATTTTTCTCCACCACGATGTCCATCATCTCGATaGTCCGGGCGAAGGCATCCTTCATGTTCATGGACA +
Preference number: 6 (lower is better)
Translates to: LHFSPPRCPSSR*SGRRHPSCSWT
Trigger: TGTCCATGAACATGAAGGATGCCTTCGCCCGGAGCATCGAGATGATGGACATCGTGGTGGAGAAAAATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CAA 72 bp TTCCACTTGTTGGGAGACAGGTGGTTATCCTGCACCTaGTCCTTCTTAGCCACGCCCTCTCCATTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: FHLLGDRWLSCT*SFLATPSPFFS
Trigger: GGAGAAAAATGGAGAGGGCGTGGCTAAGAAGGACAAGGTGCAGGATAACCACCTGTCTCCCAACAAGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2
CDS CCA 72 bp CTCCTTGTAGAACTCGGAGAAGTTATTGACGATAATTaGAATGGGGAGGGCAATCACCAGGACACCGGCAAT +
Preference number: 6 (lower is better)
Translates to: LLVELGEVIDDN*NGEGNHQDTGN
Trigger: ATTGCCGGTGTCCTGGTGATTGCCCTCCCCATTCCAATTATCGTCAATAACTTCTCCGAGTTCTACAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059826.10
ENSMUST00000207917.2