Pregenerated sensors for KCNAB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018470Ensembl transcript IDs: ENSMUST00000018614.3
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAATCGCTACTCGAAGCCGGGACTCGTTGGAGGGCGGAGCTACCCTaGTTCTGCCGCGGCGCTGCGTGGGAGCAGGGTTTGGTTGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: ESLLEAGTRWRAELP*FCRGAAWEQGLVGG Trigger: CCCACCAACCAAACCCTGCTCCCACGCAGCGCCGCGGCAGAATCAGGGTAGCTCCGCCCTCCAACGAGTCCCGGCTTCGAGTAGCGATTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CCA 90 bp | GTGGGAGATCTACTTTCTCTCTCGGTGCCCCATGGTGAAAGGATATaGCTTTGTTCATGCGAATCGCTACTCGAAGCCGGGACTCGTTGG | + |
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Preference number: 1 (lower is better) Translates to: VGDLLSLSVPHGERI*LCSCESLLEAGTRW Trigger: CCAACGAGTCCCGGCTTCGAGTAGCGATTCGCATGAACAAAGCCATATCCTTTCACCATGGGGCACCGAGAGAGAAAGTAGATCTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR GCA 90 bp | TTTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTaGTTTAGGTTTATTGCCAGGAAGACGACTGAAGTCATCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: FTDPWEVLQQRGHLY*FRFIARKTTEVICC Trigger: GCAGCAGATGACTTCAGTCGTCTTCCTGGCAATAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR GCA 90 bp | TATTGCTTTAGGTTTATTGCCAGGAAGACGACTGAAGTCATCTGCTaGTACATACAAAGTCCAGTTCAAGCCCAAGTTTTCCCCCAGACC | + |
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Preference number: 1 (lower is better) Translates to: YCFRFIARKTTEVIC*YIQSPVQAQVFPQT Trigger: GGTCTGGGGGAAAACTTGGGCTTGAACTGGACTTTGTATGTAGCAGCAGATGACTTCAGTCGTCTTCCTGGCAATAAACCTAAAGCAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR GCA 90 bp | CTTTATTGCTTTAGGTTTATTGCCAGGAAGACGACTGAAGTCATCTaGTGCTACATACAAAGTCCAGTTCAAGCCCAAGTTTTCCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: LYCFRFIARKTTEVI*CYIQSPVQAQVFPQ Trigger: CTGGGGGAAAACTTGGGCTTGAACTGGACTTTGTATGTAGCAGCAGATGACTTCAGTCGTCTTCCTGGCAATAAACCTAAAGCAATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CAA 90 bp | GATATGGCTTTGTTCATGCGAATCGCTACTCGAAGCCGGGACTCGTaGGAGGGCGGAGCTACCCTGATTCTGCCGCGGCGCTGCGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: DMALFMRIATRSRDS*EGGATLILPRRCVG Trigger: TCCCACGCAGCGCCGCGGCAGAATCAGGGTAGCTCCGCCCTCCAACGAGTCCCGGCTTCGAGTAGCGATTCGCATGAACAAAGCCATATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR GCA 90 bp | CGGTGCAAGACCAAATGGCAGAGAGGAGAAGGCTCATGCCCTAGATTAGCGAGAGGGTCCGGAGCTGATTaGAGGATGCAGGAAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RCKTKWQRGEGSCPRLARGSGAD*RMQESG Trigger: GCCACTTTCCTGCATCCTGCAATCAGCTCCGGACCC...TCTCGCTAATCTAGGGCATGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR CCA 90 bp | ATCAAGCTGAGATTTTTATTTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCTGCCGCGGCGCTGCGTaGGAGCAGGGTTTGGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: IKLRFLFTDPWEVLQQRGCRGAA*EQGLVG Trigger: ACCAACCAAACCCTGCTCCCACGCAGCGCCGCGGCA...GCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAAATAAAAATCTCAGCTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGTGCAAGACCAAATGGCAGAGAGGAGAAGGCTCATGCCCTAGATTAGCGGGCGTAGAGGCTGGGTaGGAGATCTACTTTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ERCKTKWQRGEGSCPRLAGVEAG*EIYFLS Trigger: AGAGAGAAAGTAGATCTCCCACCCAGCCTCTACGCC...CGCTAATCTAGGGCATGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCACCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCTGCATTCCAAAGATTATAATTACTTTCTGCCAGGGCCAGCCTGGCTTCTAGCAGGGTTTGGTTGGTaGGGGTCCGGAGCTGATTGC | + |
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Preference number: 2 (lower is better) Translates to: SLHSKDYNYFLPGPAWLLAGFGW*GSGADC Trigger: GCAATCAGCTCCGGACCCCCACCAACCAAACCCTGC...TAGAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATAATCTTTGGAATGCAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR TCA 90 bp | TTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTCTCGGTGCCCCATGGTaGAAGGATATGGCTTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LQIPGRSYSRGAIFIALGLGAPW*KDMALF Trigger: GAACAAAGCCATATCCTTTCACCATGGGGCACCGAG...ACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGACCAAATGGCAGAGAGGAGAAGGCTCATGCCCTAGATTAGCGAGAAGGCAGGATGCAGGAAAGTaGCTTTCCAGAGGGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: CKTKWQRGEGSCPRLARRQDAGK*LSRGYN Trigger: ATTGTACCCTCTGGAAAGCCACTTTCCTGCATCCTG...CCTTCTCGCTAATCTAGGGCATGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR CCA 90 bp | TTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTCGGTGCAAGACCAAATaGCAGAGAGGAGAAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LQIPGRSYSRGAIFIALGRCKTK*QRGEGS Trigger: TGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCACCG...ACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CAA 90 bp | GGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTTTATaGCCAGGAAGACGACTGAAGTCATCTGCTGCTACATACAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: GRSYSRGAIFIALGL*PGRRLKSSAATYKV Trigger: GACTTTGTATGTAGCAGCAGATGACTTCAGTCGTCTTCCTGGCAATAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR TCA 90 bp | TATAATTACTTTCTGCCAGGGCCAGCCTGGCTTCTATTAAACAAATACTACAAAGTGGGGGTCCGGAGCTaGTTGCAGGATGCAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: YNYFLPGPAWLLLNKYYKVGVRS*LQDAGK Trigger: CTTTCCTGCATCCTGCAATCAGCTCCGGACCCCCAC...TTTGTAGTATTTGTTTAATAGAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CAA 90 bp | AAACGCACTAAATCCTCCAGAGCACTTTGTTTTCTAAGGGCCACCTaGCCATTTCTGCGACACAGCCAGTACATTTCTTTCTGCCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: KRTKSSRALCFLRAT*PFLRHSQYISFCLC Trigger: ACAAAGGCAGAAAGAAATGTACTGGCTGTGTCGCAGAAATGGCAAGGTGGCCCTTAGAAAACAAAGTGCTCTGGAGGATTTAGTGCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR GCA 90 bp | ATCAAGCTGAGATTTTTATTTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCATTATAATTACTTTCTaGCAGGGCCAGCCTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: IKLRFLFTDPWEVLQQRGIIITF*QGQPGF Trigger: GAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATAAT...GCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAAATAAAAATCTCAGCTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR CCA 90 bp | CAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTTTACATGGTGAAAGGATATaGCTTTGTTCATGCGAATCG | + |
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Preference number: 2 (lower is better) Translates to: QIPGRSYSRGAIFIALGLHGERI*LCSCES Trigger: CGATTCGCATGAACAAAGCCATATCCTTTCACCATG...TAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGCTTTAGGTTTATTGCCAGGAAGACGACTGAAGTCATCTGCTGCTACAATATGGCTTTGTTCATaGGAATCGCTACTCGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: FIALGLLPGRRLKSSAATIWLCS*ESLLEA Trigger: GGCTTCGAGTAGCGATTCGCATGAACAAAGCCATAT...TGTAGCAGCAGATGACTTCAGTCGTCTTCCTGGCAATAAACCTAAAGCAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR TCA 90 bp | TATAATTACTTTCTGCCAGGGCCAGCCTGGCTTCTATTAAACAAATACTACAAATTCAAGGCCCATTTTTaGGATAGTCTCAATGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: YNYFLPGPAWLLLNKYYKFKAHF*DSLNVS Trigger: AGAAACATTGAGACTATCTCAAAAATGGGCCTTGAA...TTTGTAGTATTTGTTTAATAGAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR TCA 72 bp | CTCGAAGCCGGGACTCGTTGGAGGGCGGAGCTACCCTaGTTCTGCCGCGGCGCTGCGTGGGAGCAGGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LEAGTRWRAELP*FCRGAAWEQGL Trigger: CAAACCCTGCTCCCACGCAGCGCCGCGGCAGAATCAGGGTAGCTCCGCCCTCCAACGAGTCCCGGCTTCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR CAA 90 bp | GAGCGGTGCAAGACCAAATGGCAGAGAGGAGAAGGCTCATGCCCTAGATTAGCGCGAAGCCGGGACTCGTaGGAGGGCGGAGCTACCCTG | + |
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Preference number: 3 (lower is better) Translates to: ERCKTKWQRGEGSCPRLARSRDS*EGGATL Trigger: CAGGGTAGCTCCGCCCTCCAACGAGTCCCGGCTTCG...CGCTAATCTAGGGCATGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCACCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR TCA 72 bp | CGTGGGAGCAGGGTTTGGTTGGTGGGGGTCCGGAGCTaGTTGCAGGATGCAGGAAAGTGGCTTTCCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: RGSRVWLVGVRS*LQDAGKWLSRG Trigger: CCCTCTGGAAAGCCACTTTCCTGCATCCTGCAATCAGCTCCGGACCCCCACCAACCAAACCCTGCTCCCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR GCA 72 bp | CGGTGCAAGACCAAATGGCAGAGAGGAGAAGGCTCATaGCCTAGATTAGCGAGAAGGCCTAGCCCTAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: RCKTKWQRGEGS*PRLARRPSPRN Trigger: GTTCCTAGGGCTAGGCCTTCTCGCTAATCTAGGGCATGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CCA 72 bp | CTACTTTCTCTCTCGGTGCCCCATGGTGAAAGGATATaGCTTTGTTCATGCGAATCGCTACTCGAAGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: LLSLSVPHGERI*LCSCESLLEAG Trigger: CCCGGCTTCGAGTAGCGATTCGCATGAACAAAGCCATATCCTTTCACCATGGGGCACCGAGAGAGAAAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR TCA 72 bp | GGTGGGAGATCTACTTTCTCTCTCGGTGCCCCATGGTaGAAGGATATGGCTTTGTTCATGCGAATCGCTACT | + |
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Preference number: 3 (lower is better) Translates to: GGRSTFSLGAPW*KDMALFMRIAT Trigger: AGTAGCGATTCGCATGAACAAAGCCATATCCTTTCACCATGGGGCACCGAGAGAGAAAGTAGATCTCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR TCA 72 bp | CTATGTTTTCTGGGTTTCAGCAATAGGGGGAAGAAATaGGCGGAGCGGTGCAAGACCAAATGGCAGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: LCFLGFSNRGKK*AERCKTKWQRG Trigger: TCCTCTCTGCCATTTGGTCTTGCACCGCTCCGCTCATTTCTTCCCCCTATTGCTGAAACCCAGAAAACATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR GCA 72 bp | CCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTaGTTTAGGTTTATTGCCAGGAAGACGACTGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: PWEVLQQRGHLY*FRFIARKTTEV Trigger: GACTTCAGTCGTCTTCCTGGCAATAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR-3UTR CAA 90 bp | CAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTTTACATTTCTTTCTGCCTTaGTCAACATTTGTCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: QIPGRSYSRGAIFIALGLHFFLP*STFVFP Trigger: GGGGAAGACAAATGTTGACAAAGGCAGAAAGAAATG...TAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR GCA 72 bp | TTTAGGTTTATTGCCAGGAAGACGACTGAAGTCATCTaGTGCTACATACAAAGTCCAGTTCAAGCCCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: FRFIARKTTEVI*CYIQSPVQAQV Trigger: AACTTGGGCTTGAACTGGACTTTGTATGTAGCAGCAGATGACTTCAGTCGTCTTCCTGGCAATAAACCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CCA 72 bp | TCCAAAGATTATAATTACTTTCTGCCAGGGCCAGCCTaGCTTCTATTAAACAAATACTACAAAGCCCCGTTC | + |
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Preference number: 3 (lower is better) Translates to: SKDYNYFLPGPA*LLLNKYYKAPF Trigger: GAACGGGGCTTTGTAGTATTTGTTTAATAGAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATAATCTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | CTGCCGCGGCGCTGCGTGGGAGCAGGGTTTGGTTGGTGGGGGTCCGGAGCTGATGTTTGCGGCGTCAGCTaGCTCAGCACCTGTAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LPRRCVGAGFGWWGSGADVCGVS*LSTCRE Trigger: CTCCCTACAGGTGCTGAGTCAGCTGACGCCGCAAAC...ATCAGCTCCGGACCCCCACCAACCAAACCCTGCTCCCACGCAGCGCCGCGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR GCA 90 bp | CTGCCGCGGCGCTGCGTGGGAGCAGGGTTTGGTTGGTGGGGGTCCGGAGCTGATAGAGACGGTCCTCACTaGTCCGGCTGCGAAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LPRRCVGAGFGWWGSGADRDGPH*SGCEGS Trigger: AGAACCTTCGCAGCCGGAGCAGTGAGGACCGTCTCT...ATCAGCTCCGGACCCCCACCAACCAAACCCTGCTCCCACGCAGCGCCGCGGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | CCGGGACTCGTTGGAGGGCGGAGCTACCCTGATTCTGCCGCGGCGCTGCGTGGGGTCTCATCTGAGATCTaGGAGCCAAACGTGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: PGLVGGRSYPDSAAALRGVSSEI*EPNVTQ Trigger: CTGGGTCACGTTTGGCTCTCAGATCTCAGATGAGAC...CCCACGCAGCGCCGCGGCAGAATCAGGGTAGCTCCGCCCTCCAACGAGTCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR GCA 90 bp | TGTTCATGCGAATCGCTACTCGAAGCCGGGACTCGTTGGAGGGCGGAGCTACCCCAGTGCCTCGGCCGGTaGTCTCTCGAAGGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CSCESLLEAGTRWRAELPQCLGR*SLEGPQ Trigger: CTGGGGCCCTTCGAGAGAGCACCGGCCGAGGCACTG...GGGTAGCTCCGCCCTCCAACGAGTCCCGGCTTCGAGTAGCGATTCGCATGAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CAA 72 bp | TTGTTCATGCGAATCGCTACTCGAAGCCGGGACTCGTaGGAGGGCGGAGCTACCCTGATTCTGCCGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LFMRIATRSRDS*EGGATLILPRR Trigger: GCGCCGCGGCAGAATCAGGGTAGCTCCGCCCTCCAACGAGTCCCGGCTTCGAGTAGCGATTCGCATGAACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CCA 90 bp | TTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTGGCCCCAGCAGGTGCTaGGGGTCTAGGGACCACTGC | + |
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Preference number: 4 (lower is better) Translates to: LQIPGRSYSRGAIFIALGGPSRC*GSRDHC Trigger: GCAGTGGTCCCTAGACCCCCAGCACCTGCTGGGGCC...ACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR GCA 90 bp | TGCAAGACCAAATGGCAGAGAGGAGAAGGCTCATGCCCTAGATTAGCGAGAAGGTGTATTTCATGCCAGTaGCTCGGCCGGTGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CKTKWQRGEGSCPRLARRCISCQ*LGRCSL Trigger: GAGAGAGCACCGGCCGAGGCACTGGCATGAAATACA...CCTTCTCGCTAATCTAGGGCATGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CCA 90 bp | AGATTTTTATTTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATATGCCCTCCGCCCACTaGCCCTCCATTACCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RFLFTDPWEVLQQRGHLYMPSAH*PSITAP Trigger: GGGGGCGGTAATGGAGGGCCAGTGGGCGGAGGGCAT...ATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAAATAAAAATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CCA 90 bp | TGCAAGACCAAATGGCAGAGAGGAGAAGGCTCATGCCCTAGATTAGCGAGAAGGCTGCAGCACTCCATCTaGATGTCCCCCAGTATAGGG | + |
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Preference number: 4 (lower is better) Translates to: CKTKWQRGEGSCPRLARRLQHSI*MSPSIG Trigger: CCCTATACTGGGGGACATCCAGATGGAGTGCTGCAG...CCTTCTCGCTAATCTAGGGCATGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR GCA 90 bp | ATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTTTATTGCCTCACTGCTCCGGCTaGGAAGGTTCTGCTCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: IPGRSYSRGAIFIALGLLPHCSG*EGSARY Trigger: GTACCGAGCAGAACCTTCGCAGCCGGAGCAGTGAGG...CAATAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CCA 90 bp | CAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTTTACAGGCTATAGCTAGTTaGGCCACGGTGCAGCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: QIPGRSYSRGAIFIALGLQAIAS*ATVQPS Trigger: GCTAGGCTGCACCGTGGCCCAACTAGCTATAGCCTG...TAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | CAGGCAGGAGGCAGGAGTCTGCATTCCAAAGATTATAATTACTTTCTGCCAGGGTCTGAGAGCCAAACGTaGCCCAGGTACCAAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QAGGRSLHSKDYNYFLPGSESQT*PRYQGQ Trigger: TTGGCCTTGGTACCTGGGTCACGTTTGGCTCTCAGA...CCCTGGCAGAAAGTAATTATAATCTTTGGAATGCAGACTCCTGCCTCCTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | AGAGGAGAAGGCTCATGCCCTAGATTAGCGAGAAGGCCTAGCCCTAGGAACAGTTCCAGCCTTTGCTCTTaGGAATATTGCCAAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RGEGSCPRLARRPSPRNSSSLCS*EYCQGF Trigger: GAACCCTTGGCAATATTCTCAAGAGCAAAGGCTGGA...ACTGTTCCTAGGGCTAGGCCTTCTCGCTAATCTAGGGCATGAGCCTTCTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | AGAGGAGAAGGCTCATGCCCTAGATTAGCGAGAAGGCCTAGCCCTAGGAACAGTCTTGCAAGCCTTCAATaGTGTGTTTGCGACTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGEGSCPRLARRPSPRNSLASLQ*CVCDSS Trigger: GCTTGAGTCGCAAACACATCATTGAAGGCTTGCAAG...ACTGTTCCTAGGGCTAGGCCTTCTCGCTAATCTAGGGCATGAGCCTTCTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR GCA 90 bp | GTCTGCATTCCAAAGATTATAATTACTTTCTGCCAGGGCCAGCCTGGCTTCTATCGGCTGCGAAGGTTCTaGTCGGTACACGCGATAGAC | + |
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Preference number: 4 (lower is better) Translates to: VCIPKIIITFCQGQPGFYRLRRF*SVHAID Trigger: GTCTATCGCGTGTACCGAGCAGAACCTTCGCAGCCG...ATAGAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATAATCTTTGGAATGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR GCA 90 bp | GTCTGCATTCCAAAGATTATAATTACTTTCTGCCAGGGCCAGCCTGGCTTCTATGGTTCCTGTATTTCATaGCAGTGCCTCGGCCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VCIPKIIITFCQGQPGFYGSCIS*QCLGRC Trigger: GCACCGGCCGAGGCACTGGCATGAAATACAGGAACC...ATAGAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATAATCTTTGGAATGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGAGGCAGGAGTCTGCATTCCAAAGATTATAATTACTTTCTGCCAGGGTCAGCTGCTCTGCACTaGACACCCCCAGTAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QAGGRSLHSKDYNYFLPGSAALH*TPPVKQ Trigger: CTGTTTTACTGGGGGTGTCCAGTGCAGAGCAGCTGA...CCCTGGCAGAAAGTAATTATAATCTTTGGAATGCAGACTCCTGCCTCCTGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CCA 90 bp | AGTCTGCATTCCAAAGATTATAATTACTTTCTGCCAGGGCCAGCCTGGCTTCTATCAACGTATTCCAGCTaGAGGCGGTCCAGGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHSKDYNYFLPGPAWLLSTYSS*RRSRDP Trigger: AGGATCCCTGGACCGCCTCCAGCTGGAATACGTTGA...TAGAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATAATCTTTGGAATGCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | TTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTGGTGATAACATAGCTTaGTCTCCTCCAGCCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LQIPGRSYSRGAIFIALGGDNIA*SPPAFA Trigger: AGCAAAGGCTGGAGGAGATCAAGCTATGTTATCACC...ACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | GTCTGCATTCCAAAGATTATAATTACTTTCTGCCAGGGCCAGCCTGGCTTCTATCAGGAGGGATCAGATTaGACTGTCTGGCCATGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VCIPKIIITFCQGQPGFYQEGSD*TVWPWS Trigger: ACTCCATGGCCAGACAGTTCAATCTGATCCCTCCTG...ATAGAAGCCAGGCTGGCCCTGGCAGAAAGTAATTATAATCTTTGGAATGCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | AGATTTTTATTTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATCCAGTAAAACAGAGCTaGCACCCTCGCTTCGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RFLFTDPWEVLQQRGHLYPVKQS*HPRFGD Trigger: GTCTCCGAAGCGAGGGTGTCAGCTCTGTTTTACTGG...ATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAAATAAAAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR GCA 90 bp | CAGGCAGGAGGCAGGAGTCTGCATTCCAAAGATTATAATTACTTTCTGCCAGGGATCACTCTGGCTTGTTaGTTCTTGCCTTCCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGGRSLHSKDYNYFLPGITLAC*FLPSSL Trigger: GAGTGAGGAAGGCAAGAAGCAACAAGCCAGAGTGAT...CCCTGGCAGAAAGTAATTATAATCTTTGGAATGCAGACTCCTGCCTCCTGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR GCA 90 bp | ATAGTCTCAATGTTTCTTTTAGCTGCTCTATGTTTTCTGGGTTTCAGCAATAGGCTAGTTGGGCCACGGTaGAGCCTAGCTGGCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVSMFLLAALCFLGFSNRLVGPR*SLAGEQ Trigger: CTGCTCGCCAGCTAGGCTGCACCGTGGCCCAACTAG...CCTATTGCTGAAACCCAGAAAACATAGAGCAGCTAAAAGAAACATTGAGACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | GCTTTAGGTTTATTGCCAGGAAGACGACTGAAGTCATCTGCTGCTACATACAAATCCACCTTCTCCCTCTaGAAGAAGTGGTTCTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGLLPGRRLKSSAATYKSTFSL*KKWFSA Trigger: AGCGGAGAACCACTTCTTTCAGAGGGAGAAGGTGGA...TTTGTATGTAGCAGCAGATGACTTCAGTCGTCTTCCTGGCAATAAACCTAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CAA 72 bp | AAATCCTCCAGAGCACTTTGTTTTCTAAGGGCCACCTaGCCATTTCTGCGACACAGCCAGTACATTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSSRALCFLRAT*PFLRHSQYISF Trigger: GAAAGAAATGTACTGGCTGTGTCGCAGAAATGGCAAGGTGGCCCTTAGAAAACAAAGTGCTCTGGAGGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CAA 72 bp | TACAGCAGAGGGGCCATCTTTATTGCTTTAGGTTTATaGCCAGGAAGACGACTGAAGTCATCTGCTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: YSRGAIFIALGL*PGRRLKSSAAT Trigger: TGTAGCAGCAGATGACTTCAGTCGTCTTCCTGGCAATAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| 3UTR CAA 72 bp | ATTTCTGCGACACAGCCAGTACATTTCTTTCTGCCTTaGTCAACATTTGTCTTCCCCAACTTTATCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISATQPVHFFLP*STFVFPNFIPS Trigger: AGAGGGGATAAAGTTGGGGAAGACAAATGTTGACAAAGGCAGAAAGAAATGTACTGGCTGTGTCGCAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR TCA 90 bp | ATAGTCTCAATGTTTCTTTTAGCTGCTCTATGTTTTCTGGGTTTCAGCAATAGGTTCTGCTGTCTCATCTaGGATCTGAGAGCCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: IVSMFLLAALCFLGFSNRFCCLI*DLRAKR Trigger: ACGTTTGGCTCTCAGATCTCAGATGAGACAGCAGAA...CCTATTGCTGAAACCCAGAAAACATAGAGCAGCTAAAAGAAACATTGAGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CCA 90 bp | CGGAGACACCAGGCTATAGCTAGTTGGGCCACGGTGCAGCCTAGCTaGCGAGCAGTTGGGAGAAGATCCATCACTCTGGCTTGTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRHQAIASWATVQPS*RAVGRRSITLACCF Trigger: GAAGCAACAAGCCAGAGTGATGGATCTTCTCCCAACTGCTCGCCAGCTAGGCTGCACCGTGGCCCAACTAGCTATAGCCTGGTGTCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS TCA 90 bp | TTCCCCAAGAGCGCATCTATTTCCACCACCGTTTGCGGCGTCAGCTaGCTCAGCACCTGTAGGGAGCCCAGATGTTCCATCAGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPKSASISTTVCGVS*LSTCREPRCSISCS Trigger: AGAGCAGCTGATGGAACATCTGGGCTCCCTACAGGTGCTGAGTCAGCTGACGCCGCAAACGGTGGTGGAAATAGATGCGCTCTTGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS TCA 90 bp | CGTATTCCAGCTGGAGGCGGTCCAGGGATCCTTGCAAGCCTTCAATaGTGTGTTTGCGACTCAAGCCACGCTCTGTTTCTGCCTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RIPAGGGPGILASLQ*CVCDSSHALFLPVH Trigger: GTGGACAGGCAGAAACAGAGCGTGGCTTGAGTCGCAAACACATCATTGAAGGCTTGCAAGGATCCCTGGACCGCCTCCAGCTGGAATACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CAA 90 bp | CAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTTTAGCGGTCCAGGGATCCTaGCAAGCCTTCAATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QIPGRSYSRGAIFIALGLAVQGS*QAFNDV Trigger: CACATCATTGAAGGCTTGCAAGGATCCCTGGACCGC...TAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CAA 90 bp | TGCAAGACCAAATGGCAGAGAGGAGAAGGCTCATGCCCTAGATTAGCGAGAAGGCTCCAGCCTTTGCTCTaGAGAATATTGCCAAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CKTKWQRGEGSCPRLARRLQPLL*RILPRV Trigger: AACCCTTGGCAATATTCTCAAGAGCAAAGGCTGGAG...CCTTCTCGCTAATCTAGGGCATGAGCCTTCTCCTCTCTGCCATTTGGTCTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CAA 90 bp | ATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATTGCTTTAGGTTTATTGCTAGCTGGCGAGCAGTaGGGAGAAGATCCATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: IPGRSYSRGAIFIALGLLLAGEQ*GEDPSL Trigger: GAGTGATGGATCTTCTCCCAACTGCTCGCCAGCTAG...CAATAAACCTAAAGCAATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS GCA 90 bp | AATACTATATCAACGTATTCCAGCTGGAGGCGGTCCAGGGATCCTTaGAAGCCTTCAATGATGTGTTTGCGACTCAAGCCACGCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NTISTYSSWRRSRDP*KPSMMCLRLKPRSV Trigger: AACAGAGCGTGGCTTGAGTCGCAAACACATCATTGAAGGCTTGCAAGGATCCCTGGACCGCCTCCAGCTGGAATACGTTGATATAGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CAA 90 bp | ATCAAGCTGAGATTTTTATTTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCACTCGCCCATCATACTaGCTAGTAATGAGGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IKLRFLFTDPWEVLQQRGTRPSY*LVMRPH Trigger: GTGCGGCCTCATTACTAGCAAGTATGATGGGCGAGT...GCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAAATAAAAATCTCAGCTTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CCA 90 bp | TTAGGATCTGAACGATTGGCAAATACTATATCAACGTATTCCAGCTaGAGGCGGTCCAGGGATCCTTGCAAGCCTTCAATGATGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSERLANTISTYSS*RRSRDPCKPSMMCL Trigger: CAAACACATCATTGAAGGCTTGCAAGGATCCCTGGACCGCCTCCAGCTGGAATACGTTGATATAGTATTTGCCAATCGTTCAGATCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CAA 90 bp | AGATTTTTATTTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATCATCACTCTGGCTTGTaGCTTCTTGCCTTCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RFLFTDPWEVLQQRGHLYHHSGL*LLAFLT Trigger: AGTGAGGAAGGCAAGAAGCAACAAGCCAGAGTGATG...ATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAAATAAAAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CAA 90 bp | AGATTTTTATTTACAGATCCCTGGGAGGTCTTACAGCAGAGGGGCCATCTTTATGATCTCCTCCAGCCTTaGCTCTTGAGAATATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RFLFTDPWEVLQQRGHLYDLLQP*LLRILP Trigger: TGGCAATATTCTCAAGAGCAAAGGCTGGAGGAGATC...ATAAAGATGGCCCCTCTGCTGTAAGACCTCCCAGGGATCTGTAAATAAAAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CAA 90 bp | ATAGTCTCAATGTTTCTTTTAGCTGCTCTATGTTTTCTGGGTTTCAGCAATAGGATCCATCACTCTGGCTaGTTGCTTCTTGCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IVSMFLLAALCFLGFSNRIHHSG*LLLAFL Trigger: GAGGAAGGCAAGAAGCAACAAGCCAGAGTGATGGAT...CCTATTGCTGAAACCCAGAAAACATAGAGCAGCTAAAAGAAACATTGAGACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS-3UTR CAA 90 bp | ATAGTCTCAATGTTTCTTTTAGCTGCTCTATGTTTTCTGGGTTTCAGCAATAGGTTGCTCTTGAGAATATaGCCAAGGGTTCTTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVSMFLLAALCFLGFSNRLLLRI*PRVLSA Trigger: GGCTGAAAGAACCCTTGGCAATATTCTCAAGAGCAA...CCTATTGCTGAAACCCAGAAAACATAGAGCAGCTAAAAGAAACATTGAGACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS GCA 72 bp | CTAGGTTCCTGTATTTCATGCCAGTGCCTCGGCCGGTaGTCTCTCGAAGGGCCCCAGCAGGTGCTGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGSCISCQCLGR*SLEGPQQVLGV Trigger: GACCCCCAGCACCTGCTGGGGCCCTTCGAGAGAGCACCGGCCGAGGCACTGGCATGAAATACAGGAACCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CCA 72 bp | ACACCCTCGCTTCGGAGACACCAGGCTATAGCTAGTTaGGCCACGGTGCAGCCTAGCTGGCGAGCAGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPSLRRHQAIAS*ATVQPSWRAVG Trigger: CCCAACTGCTCGCCAGCTAGGCTGCACCGTGGCCCAACTAGCTATAGCCTGGTGTCTCCGAAGCGAGGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CCA 72 bp | CAGGCTATAGCTAGTTGGGCCACGGTGCAGCCTAGCTaGCGAGCAGTTGGGAGAAGATCCATCACTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QAIASWATVQPS*RAVGRRSITLA Trigger: AGCCAGAGTGATGGATCTTCTCCCAACTGCTCGCCAGCTAGGCTGCACCGTGGCCCAACTAGCTATAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CAA 72 bp | CTAGTTGGGCCACGGTGCAGCCTAGCTGGCGAGCAGTaGGGAGAAGATCCATCACTCTGGCTTGTTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVGPRCSLAGEQ*GEDPSLWLVAS Trigger: AGAAGCAACAAGCCAGAGTGATGGATCTTCTCCCAACTGCTCGCCAGCTAGGCTGCACCGTGGCCCAACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS TCA 72 bp | CTTCTGCTGTCTCATCTGAGATCTGAGAGCCAAACGTaGCCCAGGTACCAAGGCCAAGACAGGACACCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLLSHLRSESQT*PRYQGQDRTPG Trigger: TCCGGGTGTCCTGTCTTGGCCTTGGTACCTGGGTCACGTTTGGCTCTCAGATCTCAGATGAGACAGCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS TCA 72 bp | GCTGGAGGCGGTCCAGGGATCCTTGCAAGCCTTCAATaGTGTGTTTGCGACTCAAGCCACGCTCTGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGGGPGILASLQ*CVCDSSHALFL Trigger: CAGAAACAGAGCGTGGCTTGAGTCGCAAACACATCATTGAAGGCTTGCAAGGATCCCTGGACCGCCTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CAA 72 bp | CGGTCCAGGGATCCTTGCAAGCCTTCAATGATGTGTTaGCGACTCAAGCCACGCTCTGTTTCTGCCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRDPCKPSMMC*RLKPRSVSACP Trigger: TGGACAGGCAGAAACAGAGCGTGGCTTGAGTCGCAAACACATCATTGAAGGCTTGCAAGGATCCCTGGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CAA 72 bp | CTGGCGAGCAGTTGGGAGAAGATCCATCACTCTGGCTaGTTGCTTCTTGCCTTCCTCACTCTGAACTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LASSWEKIHHSG*LLLAFLTLNFF Trigger: GAAAAAGTTCAGAGTGAGGAAGGCAAGAAGCAACAAGCCAGAGTGATGGATCTTCTCCCAACTGCTCGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CAA 90 bp | AAATACTATATCAACGTATTCCAGCTGGAGGCGGTCCAGGGATCCTaGCAAGCCTTCAATGATGTGTTTGCGACTCAAGCCACGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KYYINVFQLEAVQGS*QAFNDVFATQATLC Trigger: ACAGAGCGTGGCTTGAGTCGCAAACACATCATTGAAGGCTTGCAAGGATCCCTGGACCGCCTCCAGCTGGAATACGTTGATATAGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CCA 72 bp | GAACGATTGGCAAATACTATATCAACGTATTCCAGCTaGAGGCGGTCCAGGGATCCTTGCAAGCCTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: ERLANTISTYSS*RRSRDPCKPSM Trigger: CATTGAAGGCTTGCAAGGATCCCTGGACCGCCTCCAGCTGGAATACGTTGATATAGTATTTGCCAATCGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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| CDS CAA 72 bp | GCGAGCAGTTGGGAGAAGATCCATCACTCTGGCTTGTaGCTTCTTGCCTTCCTCACTCTGAACTTTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSWEKIHHSGL*LLAFLTLNFFF Trigger: AAAGAAAAAGTTCAGAGTGAGGAAGGCAAGAAGCAACAAGCCAGAGTGATGGATCTTCTCCCAACTGCTCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018614.3 |
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