RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNAB2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028931

Ensembl transcript IDs: ENSMUST00000030768.10, ENSMUST00000105648.10, ENSMUST00000159186.9, ENSMUST00000159840.8, ENSMUST00000160884.9, ENSMUST00000161236.8, ENSMUST00000161496.9, ENSMUST00000238252.2, ENSMUST00000238715.2, ENSMUST00000238738.2

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAAGCCTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTaGCCACGAGTGTCTGTCTTGAGAGGCATACTCCGATGGGCTCCA +
Preference number: 1 (lower is better)
Translates to: ASLLPPACGGASCHT*PRVSVLRGILRWAP
Trigger: TGGAGCCCATCGGAGTATGCCTCTCAAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp GTGGTTCACAGGCAGGCAGTAGCTCCCACTGTGGGCATCCCTGCATaGCTGGCCCACCTAACAAGCAGGGCCAAGGCCAGCTGTGTGGAC +
Preference number: 1 (lower is better)
Translates to: VVHRQAVAPTVGIPA*LAHLTSRAKASCVD
Trigger: GTCCACACAGCTGGCCTTGGCCCTGCTTGTTAGGTGGGCCAGGCATGCAGGGATGCCCACAGTGGGAGCTACTGCCTGCCTGTGAACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp CAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTaGAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATGGA +
Preference number: 1 (lower is better)
Translates to: QGQLCGQVWYFLLGH*RALSRKLALLARHG
Trigger: TCCATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp AGGTGTGGTTCACAGGCAGGCAGTAGCTCCCACTGTGGGCATCCCTaGATGCCTGGCCCACCTAACAAGCAGGGCCAAGGCCAGCTGTGT +
Preference number: 1 (lower is better)
Translates to: RCGSQAGSSSHCGHP*MPGPPNKQGQGQLC
Trigger: ACACAGCTGGCCTTGGCCCTGCTTGTTAGGTGGGCCAGGCATGCAGGGATGCCCACAGTGGGAGCTACTGCCTGCCTGTGAACCACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp CTCCATCCAAGCCTGCTGAGCTTGCCTGCTGTGGGGCTCAGCAGTTaGAAGATGCTGGGAAAGCCAGCTGGAATCCCTGGCCCTGCCAGC +
Preference number: 1 (lower is better)
Translates to: LHPSLLSLPAVGLSS*KMLGKPAGIPGPAS
Trigger: GCTGGCAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCACAGCAGGCAAGCTCAGCAGGCTTGGATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp TATGGTCTTGCAAGCCTGCTGCCACCTGCCTGCGGTGGGGCCAGCTaGCACACTTGCCCACGAGTGTCTGTCTTGAGAGGCATACTCCGA +
Preference number: 1 (lower is better)
Translates to: YGLASLLPPACGGAS*HTCPRVSVLRGILR
Trigger: TCGGAGTATGCCTCTCAAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp GTGAGAGCAATATGGTCTTGCAAGCCTGCTGCCACCTGCCTGCGGTaGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGTCTTGAGAGG +
Preference number: 1 (lower is better)
Translates to: VRAIWSCKPAATCLR*GQLPHLPTSVCLER
Trigger: CCTCTCAAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp CTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTGAGAGCAATATaGTCTTGCAAGCCTGCTGCCACCTGCCTGCGGTGGGGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: LPRYSRGIGRSVRAI*SCKPAATCLRWGQL
Trigger: CAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp TCCATAAATACGGGGCCGCACCTTGGTCTGAGTCTGTCGGGAAGCTaGAGGCGTTTGCTGTCGGCCTGGTGGGGTGCAGTTAGCGAGGAG +
Preference number: 1 (lower is better)
Translates to: SINTGPHLGLSLSGS*RRLLSAWWGAVSEE
Trigger: CTCCTCGCTAACTGCACCCCACCAGGCCGACAGCAAACGCCTCCAGCTTCCCGACAGACTCAGACCAAGGTGCGGCCCCGTATTTATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp AGAGGCATACTCCGATGGGCTCCATCCAAGCCTGCTGAGCTTGCCTaGTGTGGGGCTCAGCAGTTGGAAGATGCTGGGAAAGCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: RGILRWAPSKPAELA*CGAQQLEDAGKASW
Trigger: CCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCACAGCAGGCAAGCTCAGCAGGCTTGGATGGAGCCCATCGGAGTATGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp AGGTATTGGAAGGTCTGTGAGAGCAATATGGTCTTGCAAGCCTGCTaGCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAG +
Preference number: 1 (lower is better)
Translates to: RYWKVCESNMVLQAC*HLPAVGPAATLAHE
Trigger: CTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTCTCACAGACCTTCCAATACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp CAGAGGTATTGGAAGGTCTGTGAGAGCAATATGGTCTTGCAAGCCTaGTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCAC +
Preference number: 1 (lower is better)
Translates to: QRYWKVCESNMVLQA*CHLPAVGPAATLAH
Trigger: GTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTCTCACAGACCTTCCAATACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp CGGTACAGCAGAGGTATTGGAAGGTCTGTGAGAGCAATATGGTCTTaGAAGCCTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACAC +
Preference number: 1 (lower is better)
Translates to: RYSRGIGRSVRAIWS*KPAATCLRWGQLPH
Trigger: GTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp TGCCACACTTGCCCACGAGTGTCTGTCTTGAGAGGCATACTCCGATaGGCTCCATCCAAGCCTGCTGAGCTTGCCTGCTGTGGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: CHTCPRVSVLRGILR*APSKPAELACCGAQ
Trigger: CTGAGCCCCACAGCAGGCAAGCTCAGCAGGCTTGGATGGAGCCCATCGGAGTATGCCTCTCAAGACAGACACTCGTGGGCAAGTGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp GTGCCTTGGGACCTTGGGCTCCGAGTGCCAGATCCTCTCTCTACATaGCCCTCCTCCTGCACCAGGCCTGGCAGACTACTTCAAGGTGAA +
Preference number: 1 (lower is better)
Translates to: VPWDLGLRVPDPLST*PSSCTRPGRLLQGE
Trigger: TTCACCTTGAAGTAGTCTGCCAGGCCTGGTGCAGGAGGAGGGCCATGTAGAGAGAGGATCTGGCACTCGGAGCCCAAGGTCCCAAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 90 bp CTTGGGCTCCGAGTGCCAGATCCTCTCTCTACATGGCCCTCCTCCTaGACCAGGCCTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: LGLRVPDPLSTWPSS*TRPGRLLQGEEKLA
Trigger: AGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAGGCCTGGTGCAGGAGGAGGGCCATGTAGAGAGAGGATCTGGCACTCGGAGCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp GAGAGGCCATGGAGGAAGGAGCTGGCCTTACACCCTTTGAGGGCCTaGGGGCAAGCTCCCACTAACAGGCTGTCTGTACTTGCTCTACAT +
Preference number: 1 (lower is better)
Translates to: ERPWRKELALHPLRA*GQAPTNRLSVLALH
Trigger: ATGTAGAGCAAGTACAGACAGCCTGTTAGTGGGAGCTTGCCCCCAGGCCCTCAAAGGGTGTAAGGCCAGCTCCTTCCTCCATGGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp GGGCTCGGGTTTTATTTGCCATTCCATAAATACGGGGCCGCACCTTaGTCTGAGTCTGTCGGGAAGCTGGAGGCGTTTGCTGTCGGCCTG +
Preference number: 1 (lower is better)
Translates to: GLGFYLPFHKYGAAP*SESVGKLEAFAVGL
Trigger: CAGGCCGACAGCAAACGCCTCCAGCTTCCCGACAGACTCAGACCAAGGTGCGGCCCCGTATTTATGGAATGGCAAATAAAACCCGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp CAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATTaGAAGGTCTGTGAGAGCAATATGGTCTTGCAAGCCTGCTGCCAC +
Preference number: 1 (lower is better)
Translates to: QSPHHEPTAPVQQRY*KVCESNMVLQACCH
Trigger: GTGGCAGCAGGCTTGCAAGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 90 bp CCCCTCCGCAGAAGTTTAAGAAGCAAATCCCTGACGCTTCGAGAGTaGGTGTGGAAGACAACCTCTCAGAAACACTTGGTTAACATGTCT +
Preference number: 1 (lower is better)
Translates to: PLRRSLRSKSLTLRE*VWKTTSQKHLVNMS
Trigger: AGACATGTTAACCAAGTGTTTCTGAGAGGTTGTCTTCCACACCCACTCTCGAAGCGTCAGGGATTTGCTTCTTAAACTTCTGCGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp CTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGTCTGGAATCCCTGGCCCTaGCAGCAAGGGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: LPPACGGASCHTCPRVSVWNPWP*QQGGGW
Trigger: CCACCCTCCCCCTTGCTGGCAGGGCCAGGGATTCCA...GACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGGCCACCTGCCTGCGGTaGGGCCAGCTGCCACACTTG +
Preference number: 2 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALATCLR*GQLPHL
Trigger: CAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGC...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp CTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGTCTCCATCCAAGCCTGCTaGGCTTGCCTGCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LPPACGGASCHTCPRVSVSIQAC*ACLLWG
Trigger: GCCCCACAGCAGGCAAGCTCAGCAGGCTTGGATGGA...GACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGTCGCTGGGAAAGCCAGCTaGAATCCCTGGCCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LPPACGGASCHTCPRVSVAGKAS*NPWPCQ
Trigger: CTGGCAGGGCCAGGGATTCCAGCTGGCTTTCCCAGC...GACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCAGATCCCCTGGGAGCTGGCCATaGTCTGTGCAGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GTQVRCCALGPWAPSARSPGSWP*SVQQGR
Trigger: CCTGCCCTGCTGCACAGACCATGGCCAGCTCCCAGG...GGATCTGGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCATGGAATCCCTGGCCCTaGCAGCAAGGGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASWNPWP*QQGGGW
Trigger: CCACCCTCCCCCTTGCTGGCAGGGCCAGGGATTCCA...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCAGTCTTGCAAGCCTGCTaGCACCTGCCTGCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASVLQAC*HLPAVG
Trigger: CCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGAC...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp GGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGTCTTGCAAGCCTGCTaGCACCTGCCTGCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GPRPAVWTGLVLPAGPLQVLQAC*HLPAVG
Trigger: CCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGAC...CTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGCCAGCTGGAATCCCTaGCCCTGCCAGCAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: GPRPAVWTGLVLPAGPLQASWNP*PCQQGG
Trigger: TCCCCCTTGCTGGCAGGGCCAGGGATTCCAGCTGGC...CTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCAGCAGGGCAGGAGGCTaGTCTCCTAGGGAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: RAGTQVRCCALGPWAPSASRAGG*SPREAA
Trigger: AGCTGCCTCCCTAGGAGACCAGCCTCCTGCCCTGCT...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 90 bp TGCAAGCCTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTaGCCCACGAGTGTCTGTCTTGAGAGGCATACTCCGATGGGCTCC +
Preference number: 2 (lower is better)
Translates to: CKPAATCLRWGQLPH*PTSVCLERHTPMGS
Trigger: GGAGCCCATCGGAGTATGCCTCTCAAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCGTGGGCATCCCTGCATaGCTGGCCCACCTAACAAGC +
Preference number: 2 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAVGIPA*LAHLTS
Trigger: GCTTGTTAGGTGGGCCAGGCATGCAGGGATGCCCAC...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp GGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCAGATCCCACTGTGGGCATCCCTaGATGCCTGGCCCACCTAAC +
Preference number: 2 (lower is better)
Translates to: GTQVRCCALGPWAPSARSHCGHP*MPGPPN
Trigger: GTTAGGTGGGCCAGGCATGCAGGGATGCCCACAGTG...GGATCTGGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTGCCAGCTGGAATCCCTaGCCCTGCCAGCAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: QVWYFLLGHCRALSRKLAASWNP*PCQQGG
Trigger: TCCCCCTTGCTGGCAGGGCCAGGGATTCCAGCTGGC...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp AGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTCTGCTGCCACCTGCCTaGGGTGGGGCCAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: SPHHEPTAPVQQRYWKVCLLPPA*GGASCH
Trigger: GTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAG...ACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTTTCCGTGAAGGGCCATaGCTGGGGGCAAGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: LLPPACGGASCHTCPRVSFREGP*LGASVS
Trigger: AGAAACACTTGCCCCCAGCCATGGCCCTTCACGGAA...AGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATGGACTTGTGCCTGGGAGCTaGCCATGGTCTGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LGHCRALSRKLALLARHGLVPGS*PWSVQQ
Trigger: CTGCTGCACAGACCATGGCCAGCTCCCAGGCACAAG...TCCATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCCTGTGTGGACAGGTCTaGTACTTCCTGCTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: RAGTQVRCCALGPWAPSALCGQV*YFLLGH
Trigger: GTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAG...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCCTGCTGAGCTTGCCTaGTGTGGGGCTCAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: QVWYFLLGHCRALSRKLAPAELA*CGAQQL
Trigger: CAACTGCTGAGCCCCACAGCAGGCAAGCTCAGCAGG...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTAGATAAGCAGAGGTGGTaGGCTTGGGCGGGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLDKQRW*AWAGAS
Trigger: AGAGGCTCCCGCCCAAGCCCACCACCTCTGCTTATC...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CAAGCAGGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCAAAGGATAAGCAGAGGTaGTGGGCTTGGGCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: QAGPRPAVWTGLVLPAGPKDKQR*WAWAGA
Trigger: GGCTCCCGCCCAAGCCCACCACCTCTGCTTATCCTT...TGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCCTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTTCCGTGAAGGGCCATaGCTGGGGGCAAGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALFREGP*LGASVS
Trigger: AGAAACACTTGCCCCCAGCCATGGCCCTTCACGGAA...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATAGTACCTGGTGTCCATaGAAAGAGGGAGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: LLGHCRALSRKLALLARHSTWCP*KEGGPC
Trigger: GCAGGGCCCTCCCTCTTTCCATGGACACCAGGTACT...ATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCAAGTACCTGGTGTCCATaGAAAGAGGGAGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASSTWCP*KEGGPC
Trigger: GCAGGGCCCTCCCTCTTTCCATGGACACCAGGTACT...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp AGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTGCCACCTGCCTGCGGTaGGGCCAGCTGCCACACTTG +
Preference number: 2 (lower is better)
Translates to: SPHHEPTAPVQQRYWKVCATCLR*GQLPHL
Trigger: CAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGC...ACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCAGCATCACAAAACCATaGGATGGGGCCTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: RAGTQVRCCALGPWAPSASITKP*DGASRQ
Trigger: CTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCT...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp CTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGTCCATCCAAGCCTGCTaGGCTTGCCTGCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LADYFKVKRSWLGLACRQSIQAC*ACLLWG
Trigger: GCCCCACAGCAGGCAAGCTCAGCAGGCTTGGATGGA...CTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp AGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTGTCTTGCAAGCCTGCTaGCACCTGCCTGCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SPHHEPTAPVQQRYWKVCVLQAC*HLPAVG
Trigger: CCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGAC...ACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GGGCCCTGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGGATAAGCAGAGGTGGTaGGCTTGGGCGGGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: GPCSNHQDSGRRVHTPLLDKQRW*AWAGAS
Trigger: AGAGGCTCCCGCCCAAGCCCACCACCTCTGCTTATC...CAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTATCCCGCAGGCTCCCTaGCATCAACATCCATGCAGG +
Preference number: 2 (lower is better)
Translates to: QVWYFLLGHCRALSRKLAIPQAP*HQHPCR
Trigger: CCTGCATGGATGTTGATGCCAGGGAGCCTGCGGGAT...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 90 bp CCGGTACAGCAGAGGTATTGGAAGGTCTGTGAGAGCAATATGGTCTaGCAAGCCTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACA +
Preference number: 2 (lower is better)
Translates to: PVQQRYWKVCESNMV*QACCHLPAVGPAAT
Trigger: TGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp CAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGAGGATGTCCCCCTAACTaGTGCCATCCCCTGGCATCC +
Preference number: 2 (lower is better)
Translates to: QLGSYVSQGSVGMWGRSRGCPPN*CHPLAS
Trigger: GGATGCCAGGGGATGGCATCAGTTAGGGGGACATCC...TCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGAGATAAGCAGAGGTGGTaGGCTTGGGCGGGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: QLGSYVSQGSVGMWGRSRDKQRW*AWAGAS
Trigger: AGAGGCTCCCGCCCAAGCCCACCACCTCTGCTTATC...TCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATGGAGTGAAGGGCCATGGCTaGGGGCAAGTGTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: LGHCRALSRKLALLARHGVKGHG*GQVFLL
Trigger: AAGAAGAAACACTTGCCCCCAGCCATGGCCCTTCAC...TCCATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTATTCCGTGAAGGGCCATaGCTGGGGGCAAGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLFREGP*LGASVS
Trigger: AGAAACACTTGCCCCCAGCCATGGCCCTTCACGGAA...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GCCAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAAGTACCTGGTGTCCATaGAAAGAGGGAGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: ASWVAMSAKARWVCGAGQSTWCP*KEGGPC
Trigger: GCAGGGCCCTCCCTCTTTCCATGGACACCAGGTACT...TTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATGCTGGGAAAGCCAGCTaGAATCCCTGGCCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYAGKAS*NPWPCQ
Trigger: CTGGCAGGGCCAGGGATTCCAGCTGGCTTTCCCAGC...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCACAAAACCATGGGATaGGGCCTCCAGGCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: QVWYFLLGHCRALSRKLAHKTMG*GLQAVC
Trigger: ACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTG...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp CTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTACACAGAGCTGCTTCTaGGGTCTTAGGGTCAGCACT +
Preference number: 2 (lower is better)
Translates to: LVLPAGPLQGPVQKAGSATQSCF*GLRVST
Trigger: AGTGCTGACCCTAAGACCTCAGAAGCAGCTCTGTGT...AGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp CCCCTGTCCTCACCTCTGCCCAGCCTTAAGAGCAGCAAGGAGCAGCCTTGTAATCCTGCTGAGCTTGCCTaGTGTGGGGCTCAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: PLSSPLPSLKSSKEQPCNPAELA*CGAQQL
Trigger: CAACTGCTGAGCCCCACAGCAGGCAAGCTCAGCAGG...ATTACAAGGCTGCTCCTTGCTGCTCTTAAGGCTGGGCAGAGGTGAGGACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTCCTGCTGAGCTTGCCTaGTGTGGGGCTCAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPPAELA*CGAQQL
Trigger: CAACTGCTGAGCCCCACAGCAGGCAAGCTCAGCAGG...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGACCACACTCTGCATTTaGCTTTGGAACAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALTTLCI*LWNSRS
Trigger: GCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGT...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCACCACACTCTGCATTTaGCTTTGGAACAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: RAGTQVRCCALGPWAPSATTLCI*LWNSRS
Trigger: GCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGT...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp TCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGAGATAAGCAGAGGTGGTaGGCTTGGGCGGGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: SAKARWVCGAGQDLGRMGDKQRW*AWAGAS
Trigger: AGAGGCTCCCGCCCAAGCCCACCACCTCTGCTTATC...TCCCATTCTTCCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCAAGGATAAGCAGAGGTaGTGGGCTTGGGCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: VCGAGQDLGRMGSRPALSKDKQR*WAWAGA
Trigger: GGCTCCCGCCCAAGCCCACCACCTCTGCTTATCCTT...GCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCCCCACATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp TCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGAAAGGATAAGCAGAGGTaGTGGGCTTGGGCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: SAKARWVCGAGQDLGRMGKDKQR*WAWAGA
Trigger: GGCTCCCGCCCAAGCCCACCACCTCTGCTTATCCTT...TCCCATTCTTCCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTAGTGAAGGGCCATGGCTaGGGGCAAGTGTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLVKGHG*GQVFLL
Trigger: AAGAAGAAACACTTGCCCCCAGCCATGGCCCTTCAC...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GGGCCCTGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGTTCCGTGAAGGGCCATaGCTGGGGGCAAGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: GPCSNHQDSGRRVHTPLLFREGP*LGASVS
Trigger: AGAAACACTTGCCCCCAGCCATGGCCCTTCACGGAA...CAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTGAGAGCAATATGGTCTGCCAGCTGGAATCCCTaGCCCTGCCAGCAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: PLPRYSRGIGRSVRAIWSASWNP*PCQQGG
Trigger: TCCCCCTTGCTGGCAGGGCCAGGGATTCCAGCTGGC...AGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCCCAGTGATAAAGGGCTaGCTATCCTTTCCACTACTT +
Preference number: 2 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAPVIKG*LSFPLL
Trigger: AAGTAGTGGAAAGGATAGGCAGCCCTTTATCACTGG...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GCCAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGTGAAGGGCCATGGCTaGGGGCAAGTGTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: ASWVAMSAKARWVCGAGQVKGHG*GQVFLL
Trigger: AAGAAGAAACACTTGCCCCCAGCCATGGCCCTTCAC...TTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCGTACAGCAGAGGTATTaGAAGGTCTGTGAGAGCAAT +
Preference number: 2 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAVQQRY*KVCESN
Trigger: ATTGCTCTCACAGACCTTCCAATACCTCTGCTGTAC...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp ACGTTATGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGAGCAGGGCAGGAGGCTaGTCTCCTAGGGAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: TLCMYMRRAGTQVRCCALSRAGG*SPREAA
Trigger: AGCTGCCTCCCTAGGAGACCAGCCTCCTGCCCTGCT...CAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACATAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCAGCAAGTGTTTCTTCTTaGAGGATAAGCAGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASASVSS*RISRGG
Trigger: ACCACCTCTGCTTATCCTTCAAGAAGAAACACTTGC...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp CTGTTTTCCTGTCTCTTGCACATCACCAGCAGGAGCTTAGCTCTGAGGTGTGGTTCCATCCAAGCCTGCTaGGCTTGCCTGCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LFSCLLHITSRSLALRCGSIQAC*ACLLWG
Trigger: GCCCCACAGCAGGCAAGCTCAGCAGGCTTGGATGGA...ACCACACCTCAGAGCTAAGCTCCTGCTGGTGATGTGCAAGAGACAGGAAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGACCACACTCTGCATTTaGCTTTGGAACAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: GIRCRTVSSEEAAGGIWRTTLCI*LWNSRS
Trigger: GCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGT...CCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCAAAGTACCTGGTGTCGATAAGCAGAGGTGGTaGGCTTGGGCGGGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: QDLGRMGSRPALSKVPGVDKQRW*AWAGAS
Trigger: AGAGGCTCCCGCCCAAGCCCACCACCTCTGCTTATC...GACACCAGGTACTTTGCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCAGTACAGCAGAGGTATTaGAAGGTCTGTGAGAGCAAT +
Preference number: 2 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASVQQRY*KVCESN
Trigger: ATTGCTCTCACAGACCTTCCAATACCTCTGCTGTAC...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp CCCCTGGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTACCACACTCTGCATTTaGCTTTGGAACAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: PLASVVGQYPVKKRQAASTTLCI*LWNSRS
Trigger: GCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGT...AGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTGTGAAGGGCCATGGCTaGGGGCAAGTGTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPVKGHG*GQVFLL
Trigger: AAGAAGAAACACTTGCCCCCAGCCATGGCCCTTCAC...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp ACGTTATGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGATCCCGCAGGCTCCCTaGCATCAACATCCATGCAGG +
Preference number: 2 (lower is better)
Translates to: TLCMYMRRAGTQVRCCALIPQAP*HQHPCR
Trigger: CCTGCATGGATGTTGATGCCAGGGAGCCTGCGGGAT...CAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACATAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GAGACCAAAGGGCTCGGGTTTTATTTGCCATTCCATAAATACGGGGCCGCACCTCTTGTGCCTGGGAGCTaGCCATGGTCTGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: ETKGLGFYLPFHKYGAAPLVPGS*PWSVQQ
Trigger: CTGCTGCACAGACCATGGCCAGCTCCCAGGCACAAG...AGGTGCGGCCCCGTATTTATGGAATGGCAAATAAAACCCGAGCCCTTTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GAGACCAAAGGGCTCGGGTTTTATTTGCCATTCCATAAATACGGGGCCGCACCTGAAGAGAAGCTGGCTTaGGCTGGCCTGCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: ETKGLGFYLPFHKYGAAPEEKLA*AGLQAA
Trigger: AGCTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTC...AGGTGCGGCCCCGTATTTATGGAATGGCAAATAAAACCCGAGCCCTTTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp CACCCGGCCATGGCTTCTAGAATTTCCGTGAAGGGCCATGGCTGGGGGCAAGTGATTTCCCTTTGGATGTaGACCACACTCTGCATTTGG +
Preference number: 2 (lower is better)
Translates to: HPAMASRISVKGHGWGQVISLWM*TTLCIW
Trigger: CCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAAT...CACTTGCCCCCAGCCATGGCCCTTCACGGAAATTCTAGAAGCCATGGCCGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTATTTCCCTTTGGATGTaGACCACACTCTGCATTTGG +
Preference number: 2 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGISLWM*TTLCIW
Trigger: CCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAAT...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp GCCAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAATTTCCCTTTGGATGTaGACCACACTCTGCATTTGG +
Preference number: 2 (lower is better)
Translates to: ASWVAMSAKARWVCGAGQISLWM*TTLCIW
Trigger: CCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAAT...TTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp CTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGCAACATAGCTCTAAGTaGTTCATCTGGGCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: LADYFKVKRSWLGLACRQQHSSK*FIWAKP
Trigger: GGGCTTTGCCCAGATGAAGCACTTAGAGCTATGTTG...CTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR GCA 90 bp CTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGCGTAGTTCCCTGGCTTaGAACATAGCTCTAAGTGCT +
Preference number: 2 (lower is better)
Translates to: LADYFKVKRSWLGLACRQRSSLA*NIALSA
Trigger: AGCACTTAGAGCTATGTTGCAAGCCAGGGAACTACG...CTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGAACCACACTCTGCATTTaGCTTTGGAACAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGTTLCI*LWNSRS
Trigger: GCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGT...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CCA 90 bp ACGTTATGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGTGAAGGGCCATGGCTaGGGGCAAGTGTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: TLCMYMRRAGTQVRCCALVKGHG*GQVFLL
Trigger: AAGAAGAAACACTTGCCCCCAGCCATGGCCCTTCAC...CAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACATAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 90 bp CATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATTTGGCTTaGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGG +
Preference number: 2 (lower is better)
Translates to: HSDFPLDVNHTLHLA*EQQKRANRDEEGTG
Trigger: CCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATGCAAGTGTTTCTTCTTaGAGGATAAGCAGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYASVSS*RISRGG
Trigger: ACCACCTCTGCTTATCCTTCAAGAAGAAACACTTGC...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 90 bp TCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATTaGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: SGHSDFPLDVNHTLH*ALEQQKRANRDEEG
Trigger: TCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp GGCCTCCCAAGCCAAACCCCTCCGCAGAAGTTTAAGAAGCAAATCCCTGACGCTATTTCCCTTTGGATGTaGACCACACTCTGCATTTGG +
Preference number: 2 (lower is better)
Translates to: GLPSQTPPQKFKKQIPDAISLWM*TTLCIW
Trigger: CCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAAT...AGCGTCAGGGATTTGCTTCTTAAACTTCTGCGGAGGGGTTTGGCTTGGGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR TCA 90 bp GGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCAAAGTACCGCAAGTGTTTCTTCTTaGAGGATAAGCAGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: GRSRPRKNGIQASLEQSTASVSS*RISRGG
Trigger: ACCACCTCTGCTTATCCTTCAAGAAGAAACACTTGC...GGTACTTTGCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 90 bp TTTGGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTaGGATGTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: FGGRFPVTSGHSDFP*DVNHTLHLALEQQK
Trigger: CTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGTCCCAAGCCTGCTGAGCTaGCCTGCTGTGGGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: LPPACGGASCHTCPRVSVPSLLS*PAVGLS
Trigger: GCTGAGCCCCACAGCAGGCAAGCTCAGCAGGCTTGG...GACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTGCAGAGGTGGTGGGCTaGGGCGGGAGCCTCTGGATG +
Preference number: 3 (lower is better)
Translates to: LVLPAGPLQGPVQKAGSAAEVVG*GGSLWM
Trigger: CATCCAGAGGCTCCCGCCCAAGCCCACCACCTCTGC...AGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTGCAGAGGTGGTGGGCTaGGGCGGGAGCCTCTGGATG +
Preference number: 3 (lower is better)
Translates to: QVWYFLLGHCRALSRKLAAEVVG*GGSLWM
Trigger: CATCCAGAGGCTCCCGCCCAAGCCCACCACCTCTGC...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp AGGCAGGCAGTAGCTCCCACTGTGGGCATCCCTGCATaGCTGGCCCACCTAACAAGCAGGGCCAAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: RQAVAPTVGIPA*LAHLTSRAKAS
Trigger: GCTGGCCTTGGCCCTGCTTGTTAGGTGGGCCAGGCATGCAGGGATGCCCACAGTGGGAGCTACTGCCTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp CAGTTGGAAGATGCTGGGAAAGCCAGCTGGAATCCCTaGCCCTGCCAGCAAGGGGGAGGGTGGGGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: QLEDAGKASWNP*PCQQGGGWGPR
Trigger: CCTTGGCCCCCACCCTCCCCCTTGCTGGCAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGGTGCACACCCCTCTTTaGAGATGGGCTCTTGGCGGC +
Preference number: 3 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALVHTPL*RWALGG
Trigger: GCCGCCAAGAGCCCATCTCAAAAGAGGGGTGTGCAC...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGGATCCAGGCCAGCCTaGAGCAAAGTACCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: LLPPACGGASCHTCPRVSGSRPA*SKVPGV
Trigger: GACACCAGGTACTTTGCTCAAGGCTGGCCTGGATCC...AGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGGGCCAGCTGCCACACTaGCCCACGAGTGTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALGQLPH*PTSVCL
Trigger: AAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCC...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp CTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTaGCCACGAGTGTCTGTCTTGAGAGGCATACTCCGA +
Preference number: 3 (lower is better)
Translates to: LPPACGGASCHT*PRVSVLRGILR
Trigger: TCGGAGTATGCCTCTCAAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp GAGCAATATGGTCTTGCAAGCCTGCTGCCACCTGCCTaGGGTGGGGCCAGCTGCCACACTTGCCCACGAGTG +
Preference number: 3 (lower is better)
Translates to: EQYGLASLLPPA*GGASCHTCPRV
Trigger: CACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp GCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTaGTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGG +
Preference number: 3 (lower is better)
Translates to: AKASCVDRSGTS*WATAGPCPESW
Trigger: CCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp TCACAGGCAGGCAGTAGCTCCCACTGTGGGCATCCCTaGATGCCTGGCCCACCTAACAAGCAGGGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: SQAGSSSHCGHP*MPGPPNKQGQG
Trigger: GCCTTGGCCCTGCTTGTTAGGTGGGCCAGGCATGCAGGGATGCCCACAGTGGGAGCTACTGCCTGCCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp AACAAGCAGGGCCAAGGCCAGCTGTGTGGACAGGTCTaGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCC +
Preference number: 3 (lower is better)
Translates to: NKQGQGQLCGQV*YFLLGHCRALS
Trigger: GGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCCTGCTTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCGGATCCAGGCCAGCCTaGAGCAAAGTACCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAGSRPA*SKVPGV
Trigger: GACACCAGGTACTTTGCTCAAGGCTGGCCTGGATCC...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTGCAGAGGTGGTGGGCTaGGGCGGGAGCCTCTGGATG +
Preference number: 3 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPAEVVG*GGSLWM
Trigger: CATCCAGAGGCTCCCGCCCAAGCCCACCACCTCTGC...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CAAGCAGGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCAGTGCACACCCCTCTTTaGAGATGGGCTCTTGGCGGC +
Preference number: 3 (lower is better)
Translates to: QAGPRPAVWTGLVLPAGPVHTPL*RWALGG
Trigger: GCCGCCAAGAGCCCATCTCAAAAGAGGGGTGTGCAC...TGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCCTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CAAGCAGGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCAGGCCAGCTGCCACACTaGCCCACGAGTGTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: QAGPRPAVWTGLVLPAGPGQLPH*PTSVCL
Trigger: AAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCC...TGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCCTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR TCA 72 bp CTCCTCCTGCACCAGGCCTGGCAGACTACTTCAAGGTaGAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: LLLHQAWQTTSR*REAGLGWPAGS
Trigger: GCTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAGGCCTGGTGCAGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp CTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTaGAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCC +
Preference number: 3 (lower is better)
Translates to: LCGQVWYFLLGH*RALSRKLALLA
Trigger: GGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp GTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTaGCTTGGGACCTTGGGCTCCGAGTGCCAGATCCTC +
Preference number: 3 (lower is better)
Translates to: VHEESRHTGALL*LGTLGSECQIL
Trigger: GAGGATCTGGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp GCTTGCCTGCTGTGGGGCTCAGCAGTTGGAAGATGCTaGGAAAGCCAGCTGGAATCCCTGGCCCTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: ACLLWGSAVGRC*ESQLESLALPA
Trigger: TGCTGGCAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCACAGCAGGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp ATATGGTCTTGCAAGCCTGCTGCCACCTGCCTGCGGTaGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: IWSCKPAATCLR*GQLPHLPTSVC
Trigger: ACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp AAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTaGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: KASCVDRSGTSC*ATAGPCPESWL
Trigger: GAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp TGGGGCTCAGCAGTTGGAAGATGCTGGGAAAGCCAGCTGGAATCCCTGGCCCTGGTGCACACCCCTCTTTaGAGATGGGCTCTTGGCGGC +
Preference number: 3 (lower is better)
Translates to: WGSAVGRCWESQLESLALVHTPL*RWALGG
Trigger: GCCGCCAAGAGCCCATCTCAAAAGAGGGGTGTGCAC...CAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp GCCAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGTGCACACCCCTCTTTaGAGATGGGCTCTTGGCGGC +
Preference number: 3 (lower is better)
Translates to: ASWVAMSAKARWVCGAGQVHTPL*RWALGG
Trigger: GCCGCCAAGAGCCCATCTCAAAAGAGGGGTGTGCAC...TTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTGGATCCAGGCCAGCCTaGAGCAAAGTACCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: QVWYFLLGHCRALSRKLAGSRPA*SKVPGV
Trigger: GACACCAGGTACTTTGCTCAAGGCTGGCCTGGATCC...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR TCA 72 bp AGAGGCCATGGAGGAAGGAGCTGGCCTTACACCCTTTaGGGGCCTGGGGGCAAGCTCCCACTAACAGGCTGT +
Preference number: 3 (lower is better)
Translates to: RGHGGRSWPYTL*GPGGKLPLTGC
Trigger: ACAGCCTGTTAGTGGGAGCTTGCCCCCAGGCCCTCAAAGGGTGTAAGGCCAGCTCCTTCCTCCATGGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp TGGAAGGTCTGTGAGAGCAATATGGTCTTGCAAGCCTaGTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACA +
Preference number: 3 (lower is better)
Translates to: WKVCESNMVLQA*CHLPAVGPAAT
Trigger: TGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTCTCACAGACCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp GGACCCTGTCCCCCAGAGCATCACAAAACCATGGGATaGGGCCTCCAGGCAGTGTGTACTGACCAATCCCGC +
Preference number: 3 (lower is better)
Translates to: GPCPPEHHKTMG*GLQAVCTDQSR
Trigger: GCGGGATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTGGGGGACAGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp TGGGGCTCAGCAGTTGGAAGATGCTGGGAAAGCCAGCTGGAATCCCTGGCCCTGGGATCCAGGCCAGCCTaGAGCAAAGTACCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: WGSAVGRCWESQLESLALGSRPA*SKVPGV
Trigger: GACACCAGGTACTTTGCTCAAGGCTGGCCTGGATCC...CAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp GGCCTCCCAAGCCAAACCCCTCCGCAGAAGTTTAAGAAGCAAATCCCTGACGCTCCAAGCCTGCTGAGCTaGCCTGCTGTGGGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: GLPSQTPPQKFKKQIPDAPSLLS*PAVGLS
Trigger: GCTGAGCCCCACAGCAGGCAAGCTCAGCAGGCTTGG...AGCGTCAGGGATTTGCTTCTTAAACTTCTGCGGAGGGGTTTGGCTTGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGGGCCAGCTGCCACACTaGCCCACGAGTGTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: LADYFKVKRSWLGLACRQGQLPH*PTSVCL
Trigger: AAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCC...CTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR TCA 72 bp GTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTaGCTTTGGAGGTCGATTCCCTGTCACGTCTGGGCA +
Preference number: 3 (lower is better)
Translates to: VSSEEAAGGIWR*LWRSIPCHVWA
Trigger: TGCCCAGACGTGACAGGGAATCGACCTCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR TCA 72 bp CGTGAAGGGCCATGGCTGGGGGCAAGTGTTTCTTCTTaGAGGATAAGCAGAGGTGGTGGGCTTGGGCGGGAG +
Preference number: 3 (lower is better)
Translates to: REGPWLGASVSS*RISRGGGLGRE
Trigger: CTCCCGCCCAAGCCCACCACCTCTGCTTATCCTTCAAGAAGAAACACTTGCCCCCAGCCATGGCCCTTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR TCA 72 bp GAGAGGCATACTCCGATGGGCTCCATCCAAGCCTGCTaGGCTTGCCTGCTGTGGGGCTCAGCAGTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: ERHTPMGSIQAC*ACLLWGSAVGR
Trigger: TCTTCCAACTGCTGAGCCCCACAGCAGGCAAGCTCAGCAGGCTTGGATGGAGCCCATCGGAGTATGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp CTCCGATGGGCTCCATCCAAGCCTGCTGAGCTTGCCTaGTGTGGGGCTCAGCAGTTGGAAGATGCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: LRWAPSKPAELA*CGAQQLEDAGK
Trigger: TTTCCCAGCATCTTCCAACTGCTGAGCCCCACAGCAGGCAAGCTCAGCAGGCTTGGATGGAGCCCATCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTaGTGTGCCTTGGGACCTTGGGCTCCGAGTGCCAGA +
Preference number: 3 (lower is better)
Translates to: CMYMRRAGTQVR*CALGPWAPSAR
Trigger: TCTGGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTGGCCAGCTGCCACACTaGCCCACGAGTGTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPGQLPH*PTSVCL
Trigger: AAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCC...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp GGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGAACCACACTCTGCATTaGGCTTTGGAACAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: GPRPAVWTGLVLPAGPLQNHTLH*ALEQQK
Trigger: CTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT...CTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp CAAAGTACCTGGTGTCCATGGAAAGAGGGAGGGCCCTaGTCTAACCACCAGGACTCTGGGAGAAGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: QSTWCPWKEGGP*SNHQDSGRRVH
Trigger: GTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCAGGGCCCTCCCTCTTTCCATGGACACCAGGTACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp CGAGTGCCAGATCCTCTCTCTACATGGCCCTCCTCCTaGACCAGGCCTGGCAGACTACTTCAAGGTGAAGAG +
Preference number: 3 (lower is better)
Translates to: RVPDPLSTWPSS*TRPGRLLQGEE
Trigger: CTCTTCACCTTGAAGTAGTCTGCCAGGCCTGGTGCAGGAGGAGGGCCATGTAGAGAGAGGATCTGGCACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp TGCCCACGAGTGTCTGTCTTGAGAGGCATACTCCGATaGGCTCCATCCAAGCCTGCTGAGCTTGCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: CPRVSVLRGILR*APSKPAELACC
Trigger: ACAGCAGGCAAGCTCAGCAGGCTTGGATGGAGCCCATCGGAGTATGCCTCTCAAGACAGACACTCGTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp TGGAGGAAGGAGCTGGCCTTACACCCTTTGAGGGCCTaGGGGCAAGCTCCCACTAACAGGCTGTCTGTACTT +
Preference number: 3 (lower is better)
Translates to: WRKELALHPLRA*GQAPTNRLSVL
Trigger: AAGTACAGACAGCCTGTTAGTGGGAGCTTGCCCCCAGGCCCTCAAAGGGTGTAAGGCCAGCTCCTTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTAACCACACTCTGCATTaGGCTTTGGAACAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: QVWYFLLGHCRALSRKLANHTLH*ALEQQK
Trigger: CTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp CTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATGGACATAGTGATTTCCCTTaGGATGTGAACCACACTCTG +
Preference number: 3 (lower is better)
Translates to: LGHCRALSRKLALLARHGHSDFP*DVNHTL
Trigger: CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATG...TCCATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR TCA 72 bp GAGACCTCCACCCGGCCATGGCTTCTAGAATTTCCGTaGAGGGCCATGGCTGGGGGCAAGTGTTTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: ETSTRPWLLEFP*RAMAGGKCFFL
Trigger: CAAGAAGAAACACTTGCCCCCAGCCATGGCCCTTCACGGAAATTCTAGAAGCCATGGCCGGGTGGAGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTAACCACACTCTGCATTaGGCTTTGGAACAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGNHTLH*ALEQQK
Trigger: CTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp ACGTTATGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGATCCAGGCCAGCCTaGAGCAAAGTACCTGGTGTC +
Preference number: 3 (lower is better)
Translates to: TLCMYMRRAGTQVRCCALGSRPA*SKVPGV
Trigger: GACACCAGGTACTTTGCTCAAGGCTGGCCTGGATCC...CAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACATAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCACCTCTCAGAAACACTaGGTTAACATGTCTTTTGCA +
Preference number: 3 (lower is better)
Translates to: RAGTQVRCCALGPWAPSATSQKH*VNMSFA
Trigger: TGCAAAAGACATGTTAACCAAGTGTTTCTGAGAGGT...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp TACAGCAGAGGTATTGGAAGGTCTGTGAGAGCAATATaGTCTTGCAAGCCTGCTGCCACCTGCCTGCGGTGG +
Preference number: 3 (lower is better)
Translates to: YSRGIGRSVRAI*SCKPAATCLRW
Trigger: CCACCGCAGGCAGGTGGCAGCAGGCTTGCAAGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR TCA 72 bp CACAGAGCTGCTTCTGAGGTCTTAGGGTCAGCACTATaGGCAGCGAAGGTTAGAGAGCTCAGGGTTTTCGGG +
Preference number: 3 (lower is better)
Translates to: HRAASEVLGSAL*AAKVRELRVFG
Trigger: CCCGAAAACCCTGAGCTCTCTAACCTTCGCTGCTCATAGTGCTGACCCTAAGACCTCAGAAGCAGCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp CATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATTaGAAGGTCTGTGAGAGCAATATGGTCTTGCAAGCC +
Preference number: 3 (lower is better)
Translates to: HHEPTAPVQQRY*KVCESNMVLQA
Trigger: GGCTTGCAAGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATCATAGTGATTTCCCTTaGGATGTGAACCACACTCTG +
Preference number: 3 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYHSDFP*DVNHTL
Trigger: CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATG...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp ACGTTATGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGAACCACACTCTGCATTaGGCTTTGGAACAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: TLCMYMRRAGTQVRCCALNHTLH*ALEQQK
Trigger: CTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT...CAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACATAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp TGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGCATAGTGATTTCCCTTaGGATGTGAACCACACTCTG +
Preference number: 3 (lower is better)
Translates to: CSNHQDSGRRVHTPLLRWHSDFP*DVNHTL
Trigger: CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATG...CCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp AACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGGCTCTTCATAGTGATTTCCCTTaGGATGTGAACCACACTCTG +
Preference number: 3 (lower is better)
Translates to: NHQDSGRRVHTPLLRWALHSDFP*DVNHTL
Trigger: CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATG...AAGAGCCCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp GGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCAAAGTACCCATAGTGATTTCCCTTaGGATGTGAACCACACTCTG +
Preference number: 3 (lower is better)
Translates to: GRSRPRKNGIQASLEQSTHSDFP*DVNHTL
Trigger: CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATG...GGTACTTTGCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp TTTTATTTGCCATTCCATAAATACGGGGCCGCACCTTaGTCTGAGTCTGTCGGGAAGCTGGAGGCGTTTGCT +
Preference number: 3 (lower is better)
Translates to: FYLPFHKYGAAP*SESVGKLEAFA
Trigger: AGCAAACGCCTCCAGCTTCCCGACAGACTCAGACCAAGGTGCGGCCCCGTATTTATGGAATGGCAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR-3UTR CAA 90 bp GAGACCAAAGGGCTCGGGTTTTATTTGCCATTCCATAAATACGGGGCCGCACCTAACCACACTCTGCATTaGGCTTTGGAACAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: ETKGLGFYLPFHKYGAAPNHTLH*ALEQQK
Trigger: CTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT...AGGTGCGGCCCCGTATTTATGGAATGGCAAATAAAACCCGAGCCCTTTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
3UTR TCA 72 bp CTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTaGACCACACTCTGCATTTGGCTTTGGAACAGCAGA +
Preference number: 3 (lower is better)
Translates to: LSRLGIVISLWM*TTLCIWLWNSR
Trigger: TCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR GCA 72 bp AACATCCATGCAGGATTTATCCCAGTGATAAAGGGCTaGCTATCCTTTCCACTACTTCCTCTCCCCATCCTG +
Preference number: 3 (lower is better)
Translates to: NIHAGFIPVIKG*LSFPLLPLPIL
Trigger: CAGGATGGGGAGAGGAAGTAGTGGAAAGGATAGGCAGCCCTTTATCACTGGGATAAATCCTGCATGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp GAGAGTGGGTGTGGAAGACAACCTCTCAGAAACACTTaGTTAACATGTCTTTTGCATCTAGGGCTCCTGTGG +
Preference number: 3 (lower is better)
Translates to: ESGCGRQPLRNT*LTCLLHLGLLW
Trigger: CCACAGGAGCCCTAGATGCAAAAGACATGTTAACCAAGTGTTTCTGAGAGGTTGTCTTCCACACCCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CCA 72 bp AGAAGTTTAAGAAGCAAATCCCTGACGCTTCGAGAGTaGGTGTGGAAGACAACCTCTCAGAAACACTTGGTT +
Preference number: 3 (lower is better)
Translates to: RSLRSKSLTLRE*VWKTTSQKHLV
Trigger: AACCAAGTGTTTCTGAGAGGTTGTCTTCCACACCCACTCTCGAAGCGTCAGGGATTTGCTTCTTAAACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGCTGTGCGCTGGGCGGTaGAGCCGTCCAGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: ASEQRRGGNRELSGWGTRLCAGR*SRPGKG
Trigger: GCCTTTCCCTGGACGGCTGCACCGCCCAGCGCACAG...CCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR GCA 90 bp GCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCCCGGGGGAGCCTGTCTaGCGCAGGGAGAGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: AEASEQRRGGNRELSGWGPGEPV*RRESRA
Trigger: AGCTCGACTCTCCCTGCGGCAGACAGGCTCCCCCGG...GCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTAGCTCTCCATGTTCCTaGCCTGGGCGGCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LLPPACGGASCHTCPRVSSSPCS*PGRLPA
Trigger: TGCGGGCAGCCGCCCAGGCCAGGAACATGGAGAGCT...AGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR GCA 90 bp CTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGTCTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LPPACGGASCHTCPRVSVSFSLA*WRRPSS
Trigger: TGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGA...GACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGGCAGTTCCTTCAGCTTaGCCTGCTGGCGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: ASEQRRGGNRELSGWGTRAVPSA*PAGGDP
Trigger: AGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGC...CCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCCAGGCTATGGCCAGCTaGGGTAGGGTGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AEASEQRRGGNRELSGWGQAMAS*GRVQPR
Trigger: CCTGGGCTGCACCCTACCCCAGCTGGCCATAGCCTG...GCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGCCGGGGGAGCCTGTCTaGCGCAGGGAGAGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GIRCRTVSSEEAAGGIWRPGEPV*RRESRA
Trigger: AGCTCGACTCTCCCTGCGGCAGACAGGCTCCCCCGG...CCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCTCCACGTACTCCAGCTaGAGCCGCTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: AEASEQRRGGNRELSGWGSTYSS*SRSRDA
Trigger: AGCGTCCCTGGAGCGGCTGCAGCTGGAGTACGTGGA...GCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGACACGGGTGCCTGGGCTaGGGCTGCTGGCTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGHGCLG*GCWLPS
Trigger: GCTCGGCAGCCAGCAGCCCCAGCCCAGGCACCCGTG...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS-3UTR CCA 90 bp CAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGAGCGTCCACGGGTGCCTaGGCTGGGGCTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLGSYVSQGSVGMWGRSRASTGA*AGAAGC
Trigger: GCAGCCAGCAGCCCCAGCCCAGGCACCCGTGGACGC...TCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
3UTR CAA 72 bp GCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTaGCCCACGAGTGTCTGTCTTGAGAGGCATACTCCG +
Preference number: 4 (lower is better)
Translates to: AATCLRWGQLPH*PTSVCLERHTP
Trigger: CGGAGTATGCCTCTCAAGACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCCATGGAGCTCCAGCGTaGTGTGCCCCAGTACATGGC +
Preference number: 4 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAHGAPA*CAPVHG
Trigger: GCCATGTACTGGGGCACATCACGCTGGAGCTCCATG...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCCCGAGTAGGCCTCCATaGTCTCCATGGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAPSRPP*SPWSSS
Trigger: GCTGGAGCTCCATGGAGATCATGGAGGCCTACTCGG...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp GCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCCCAGAAGCACGGAGCTaGCACCCTCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AEASEQRRGGNRELSGWGPEARS*HPHSSG
Trigger: GCCTGAGGAATGAGGGTGTCAGCTCCGTGCTTCTGG...GCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCATCCACGTACTCCAGCTaGAGCCGCTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASSTYSS*SRSRDA
Trigger: AGCGTCCCTGGAGCGGCTGCAGCTGGAGTACGTGGA...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCAGCACGGTCTCTTCCATaGGCGTGTTGGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASARSLP*ACWGLG
Trigger: GCCCAGACCCCAACACGCCCATGGAAGAGACCGTGC...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
CDS-3UTR CCA 90 bp AGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SRSERTETRREPGTVRVGFSLAC*RRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAA...CCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTACAGGCTATGGCCAGCTaGGGTAGGGTGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLQAMAS*GRVQPR
Trigger: CCTGGGCTGCACCCTACCCCAGCTGGCCATAGCCTG...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATGGATCAGGCACCAGGCTATaGCCAGCTGGGGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LGHCRALSRKLALLARHGSGTRL*PAGVGC
Trigger: GCACCCTACCCCAGCTGGCCATAGCCTGGTGCCTGA...TCCATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATGGACCAGAAGCACGGAGCTaGCACCCTCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LGHCRALSRKLALLARHGPEARS*HPHSSG
Trigger: GCCTGAGGAATGAGGGTGTCAGCTCCGTGCTTCTGG...TCCATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTTTTGAGATGGGCTCTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCCGGGGGAGCCTGTCTaGCGCAGGGAGAGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: LLRWALGGPSCSKDETSTPGEPV*RRESRA
Trigger: AGCTCGACTCTCCCTGCGGCAGACAGGCTCCCCCGG...GGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAGAGCCCATCTCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGAGCTCCAGCGTGATGTaGCCCAGTACATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALSSSVM*PSTWPS
Trigger: GGATGGCCATGTACTGGGGCACATCACGCTGGAGCT...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGTCATCTCATCCGTGATCTaGCCCCCGAAGGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: LPPACGGASCHTCPRVSVISSVI*PPKVTH
Trigger: ATGGGTGACCTTCGGGGGCCAGATCACGGATGAGAT...GACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp AGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGGGGCGTGTTGGGGTCTaGGCGGTTGGCAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: SRSERTETRREPGTVRVGGRVGV*AVGKNH
Trigger: GTGGTTTTTGCCAACCGCCCAGACCCCAACACGCCC...CCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCAGGGCGTGTTGGGGTCTaGGCGGTTGGCAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASGRVGV*AVGKNH
Trigger: GTGGTTTTTGCCAACCGCCCAGACCCCAACACGCCC...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTATTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLFSLAC*RRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAA...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GIRCRTVSSEEAAGGIWRFSLAC*RRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAA...CCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: QVWYFLLGHCRALSRKLAFSLAC*RRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAA...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTTCCCTCTGGAACATGTaGTATTCCGCTTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LLPPACGGASCHTCPRVSSLWNM*YSACSQ
Trigger: CTGCGAGCAAGCGGAATATCACATGTTCCAGAGGGA...AGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGGTCCCTCTGGAACATGTaGTATTCCGCTTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: RANRDEEGTGNCPGGARGSLWNM*YSACSQ
Trigger: CTGCGAGCAAGCGGAATATCACATGTTCCAGAGGGA...CCCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTACCAGAAGCACGGAGCTaGCACCCTCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLPEARS*HPHSSG
Trigger: GCCTGAGGAATGAGGGTGTCAGCTCCGTGCTTCTGG...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CAAGCAGGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACCAGAAGCACGGAGCTaGCACCCTCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QAGPRPAVWTGLVLPAGPPEARS*HPHSSG
Trigger: GCCTGAGGAATGAGGGTGTCAGCTCCGTGCTTCTGG...TGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCCTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TGGGGCTCAGCAGTTGGAAGATGCTGGGAAAGCCAGCTGGAATCCCTGGCCCTGTCCACGTACTCCAGCTaGAGCCGCTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: WGSAVGRCWESQLESLALSTYSS*SRSRDA
Trigger: AGCGTCCCTGGAGCGGCTGCAGCTGGAGTACGTGGA...CAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp AGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGAGCTCCAGCGTGATGTaGCCCAGTACATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SRSERTETRREPGTVRVGSSSVM*PSTWPS
Trigger: GGATGGCCATGTACTGGGGCACATCACGCTGGAGCT...CCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TGGGGCTCAGCAGTTGGAAGATGCTGGGAAAGCCAGCTGGAATCCCTGGCCCTGTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WGSAVGRCWESQLESLALSFSLA*WRRPSS
Trigger: TGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGA...CAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCCCTGGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PLASVVGQYPVKKRQAASSFSLA*WRRPSS
Trigger: TGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGA...AGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp AGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRSERTETRREPGTVRVGRSAMA*SSFSLA
Trigger: GGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACG...CCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATCGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LLGHCRALSRKLALLARHRSAMA*SSFSLA
Trigger: GGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACG...ATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCACGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASRSAMA*SSFSLA
Trigger: GGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACG...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAAGCAGGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCAGGGCGTGTTGGGGTCTaGGCGGTTGGCAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: QAGPRPAVWTGLVLPAGPGRVGV*AVGKNH
Trigger: GTGGTTTTTGCCAACCGCCCAGACCCCAACACGCCC...TGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCCTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGCACGGTCTCTTCCATaGGCGTGTTGGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGARSLP*ACWGLG
Trigger: GCCCAGACCCCAACACGCCCATGGAAGAGACCGTGC...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
CDS-3UTR CCA 90 bp CGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGGGAGGGGACCAGGTCATaGCACCTACTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: RANRDEEGTGNCPGGARGEGTRS*HLLLSC
Trigger: ACAAGATAGGAGTAGGTGCCATGACCTGGTCCCCTC...CCCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGGGCTCTGGAGTAGGGTaGGATCCCGCTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALGSGVG*DPAVIL
Trigger: AAGTATGACAGCGGGATCCCACCCTACTCCAGAGCC...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GCCAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGCAGTTCCTTCAGCTTaGCCTGCTGGCGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: ASWVAMSAKARWVCGAGQAVPSA*PAGGDP
Trigger: AGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGC...TTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTTCAGGCACCAGGCTATaGCCAGCTGGGGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGSGTRL*PAGVGC
Trigger: GCACCCTACCCCAGCTGGCCATAGCCTGGTGCCTGA...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 72 bp AGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTaGGGCTCCGAGTGCCAGATCCTCTCTCTACATGGC +
Preference number: 4 (lower is better)
Translates to: SRHTGALLCLGT*GSECQILSLHG
Trigger: GCCATGTAGAGAGAGGATCTGGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 72 bp ATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTaGGGACCTTGGGCTCCGAGTGCCAGATCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: MRRAGTQVRCCA*GPWAPSARSSL
Trigger: GAGAGAGGATCTGGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGCCGGGGGAGCCTGTCTaGCGCAGGGAGAGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: CSNHQDSGRRVHTPLLRWPGEPV*RRESRA
Trigger: AGCTCGACTCTCCCTGCGGCAGACAGGCTCCCCCGG...CCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GGCCTCCCAAGCCAAACCCCTCCGCAGAAGTTTAAGAAGCAAATCCCTGACGCTCCGGGGGAGCCTGTCTaGCGCAGGGAGAGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GLPSQTPPQKFKKQIPDAPGEPV*RRESRA
Trigger: AGCTCGACTCTCCCTGCGGCAGACAGGCTCCCCCGG...AGCGTCAGGGATTTGCTTCTTAAACTTCTGCGGAGGGGTTTGGCTTGGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGATCCACGTACTCCAGCTaGAGCCGCTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGSTYSS*SRSRDA
Trigger: AGCGTCCCTGGAGCGGCTGCAGCTGGAGTACGTGGA...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTTTTGAGATGGGCTCTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLRWALGGPSCSKDETSTSFSLA*WRRPSS
Trigger: TGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGA...GGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAGAGCCCATCTCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LADYFKVKRSWLGLACRQSFSLA*WRRPSS
Trigger: TGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGA...CTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TGGGGCTCAGCAGTTGGAAGATGCTGGGAAAGCCAGCTGGAATCCCTGGCCCTGGATACTTCATGCCTGTaGGCTGGGCGGTGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: WGSAVGRCWESQLESLALDTSCL*AGRCSR
Trigger: ACGGCTGCACCGCCCAGCGCACAGGCATGAAGTATC...CAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CCA 90 bp CTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATGGAATCTCATCCGTGATCTaGCCCCCGAAGGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: LGHCRALSRKLALLARHGISSVI*PPKVTH
Trigger: ATGGGTGACCTTCGGGGGCCAGATCACGGATGAGAT...TCCATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATGGATGGGGTCTGGGCGGTTaGCAAAAACCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: LGHCRALSRKLALLARHGWGLGG*QKPHPR
Trigger: ACGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCA...TCCATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGTGGGGTCTGGGCGGTTaGCAAAAACCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: GPRPAVWTGLVLPAGPLQWGLGG*QKPHPR
Trigger: ACGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCA...CTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCCCTGGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTCTTCCATGGGCGTGTTaGGGTCTGGGCGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PLASVVGQYPVKKRQAASLPWAC*GLGGWQ
Trigger: TTGCCAACCGCCCAGACCCCAACACGCCCATGGAAG...AGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTCTTCCATGGGCGTGTTaGGGTCTGGGCGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGLPWAC*GLGGWQ
Trigger: TTGCCAACCGCCCAGACCCCAACACGCCCATGGAAG...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGGCACGGTCTCTTCCATaGGCGTGTTGGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LADYFKVKRSWLGLACRQARSLP*ACWGLG
Trigger: GCCCAGACCCCAACACGCCCATGGAAGAGACCGTGC...CTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
CDS-3UTR CCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCAGGCTCTGGAGTAGGGTaGGATCCCGCTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASGSGVG*DPAVIL
Trigger: AAGTATGACAGCGGGATCCCACCCTACTCCAGAGCC...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GSYVSQGSVGMWGRSRPRFSLAC*RRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAA...CCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGAGCAGTTCCTTCAGCTTaGCCTGCTGGCGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: QLGSYVSQGSVGMWGRSRAVPSA*PAGGDP
Trigger: AGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGC...TCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp AGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTCAGGCTATGGCCAGCTaGGGTAGGGTGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPHHEPTAPVQQRYWKVCQAMAS*GRVQPR
Trigger: CCTGGGCTGCACCCTACCCCAGCTGGCCATAGCCTG...ACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTCAGGCTATGGCCAGCTaGGGTAGGGTGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPQAMAS*GRVQPR
Trigger: CCTGGGCTGCACCCTACCCCAGCTGGCCATAGCCTG...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCCCTGTCCTCACCTCTGCCCAGCCTTAAGAGCAGCAAGGAGCAGCCTTGTAATCAGGCTATGGCCAGCTaGGGTAGGGTGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLSSPLPSLKSSKEQPCNQAMAS*GRVQPR
Trigger: CCTGGGCTGCACCCTACCCCAGCTGGCCATAGCCTG...ATTACAAGGCTGCTCCTTGCTGCTCTTAAGGCTGGGCAGAGGTGAGGACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGTCAGGCACCAGGCTATaGCCAGCTGGGGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSYVSQGSVGMWGRSRPRSGTRL*PAGVGC
Trigger: GCACCCTACCCCAGCTGGCCATAGCCTGGTGCCTGA...CCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGATCAGGCACCAGGCTATaGCCAGCTGGGGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: QLGSYVSQGSVGMWGRSRSGTRL*PAGVGC
Trigger: GCACCCTACCCCAGCTGGCCATAGCCTGGTGCCTGA...TCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 72 bp CACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTaGAGATGGGCTCTTGGCGGCCCCTCCTGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: HQDSGRRVHTPL*RWALGGPSCSK
Trigger: CTTAGAGCAGGAGGGGCCGCCAAGAGCCCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGCATGGAGCTCCAGCGTaGTGTGCCCCAGTACATGGC +
Preference number: 4 (lower is better)
Translates to: LADYFKVKRSWLGLACRQHGAPA*CAPVHG
Trigger: GCCATGTACTGGGGCACATCACGCTGGAGCTCCATG...CTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp GGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGCCGAGTAGGCCTCCATaGTCTCCATGGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GFGTAEASEQRRGGNRELPSRPP*SPWSSS
Trigger: GCTGGAGCTCCATGGAGATCATGGAGGCCTACTCGG...CAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGACCGAGTAGGCCTCCATaGTCTCCATGGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGPSRPP*SPWSSS
Trigger: GCTGGAGCTCCATGGAGATCATGGAGGCCTACTCGG...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTCCACGTACTCCAGCTaGAGCCGCTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: LALEQQKRANRDEEGTGNSTYSS*SRSRDA
Trigger: AGCGTCCCTGGAGCGGCTGCAGCTGGAGTACGTGGA...GTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTAGCTCCAGCGTGATGTaGCCCAGTACATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGSSSVM*PSTWPS
Trigger: GGATGGCCATGTACTGGGGCACATCACGCTGGAGCT...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GGGCCCTGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGCTCCAGCGTGATGTaGCCCAGTACATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GPCSNHQDSGRRVHTPLLSSSVM*PSTWPS
Trigger: GGATGGCCATGTACTGGGGCACATCACGCTGGAGCT...CAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TGGGGCTCAGCAGTTGGAAGATGCTGGGAAAGCCAGCTGGAATCCCTGGCCCTGAGCTCCAGCGTGATGTaGCCCAGTACATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: WGSAVGRCWESQLESLALSSSVM*PSTWPS
Trigger: GGATGGCCATGTACTGGGGCACATCACGCTGGAGCT...CAGGGCCAGGGATTCCAGCTGGCTTTCCCAGCATCTTCCAACTGCTGAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPSFSLA*WRRPSS
Trigger: TGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGA...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CACCCGGCCATGGCTTCTAGAATTTCCGTGAAGGGCCATGGCTGGGGGCAAGTGGATTCCGATACTTCATaGCTGTGCGCTGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: HPAMASRISVKGHGWGQVDSDTS*LCAGRC
Trigger: GCACCGCCCAGCGCACAGGCATGAAGTATCGGAATC...CACTTGCCCCCAGCCATGGCCCTTCACGGAAATTCTAGAAGCCATGGCCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CCA 90 bp CTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTATCTCATCCGTGATCTaGCCCCCGAAGGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: LVLPAGPLQGPVQKAGSAISSVI*PPKVTH
Trigger: ATGGGTGACCTTCGGGGGCCAGATCACGGATGAGAT...AGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGAGCACGGTCTCTTCCATaGGCGTGTTGGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAKARWVCGAGQDLGRMGARSLP*ACWGLG
Trigger: GCCCAGACCCCAACACGCCCATGGAAGAGACCGTGC...TCCCATTCTTCCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
CDS-3UTR CCA 90 bp GTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: VCGAGQDLGRMGSRPALSFSLAC*RRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAA...GCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCCCCACATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTGCAGTTCCTTCAGCTTaGCCTGCTGGCGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPAVPSA*PAGGDP
Trigger: AGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGC...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGCTCCGGGCCACCATaGCCACAGCGCGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: EPHSAFGFGTAEASEQRRGSGPP*PQRGSV
Trigger: GACGCTTCCGCGCTGTGGCCATGGTGGCCCGGAGCC...TCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS-3UTR CCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGGTGTCGTTGCTGTTTaGGGCACTCTGCACGGACAG +
Preference number: 4 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGGVVAV*GTLHGQ
Trigger: CTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACC...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS-3UTR TCA 90 bp CCCCTGTCCTCACCTCTGCCCAGCCTTAAGAGCAGCAAGGAGCAGCCTTGTAATCCGAGTAGGCCTCCATaGTCTCCATGGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLSSPLPSLKSSKEQPCNPSRPP*SPWSSS
Trigger: GCTGGAGCTCCATGGAGATCATGGAGGCCTACTCGG...ATTACAAGGCTGCTCCTTGCTGCTCTTAAGGCTGGGCAGAGGTGAGGACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTATCCCTCTGGAACATGTaGTATTCCGCTTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLSLWNM*YSACSQ
Trigger: CTGCGAGCAAGCGGAATATCACATGTTCCAGAGGGA...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CCCCTGTCCTCACCTCTGCCCAGCCTTAAGAGCAGCAAGGAGCAGCCTTGTAATCCAGAAGCACGGAGCTaGCACCCTCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PLSSPLPSLKSSKEQPCNPEARS*HPHSSG
Trigger: GCCTGAGGAATGAGGGTGTCAGCTCCGTGCTTCTGG...ATTACAAGGCTGCTCCTTGCTGCTCTTAAGGCTGGGCAGAGGTGAGGACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GGCCTCCCAAGCCAAACCCCTCCGCAGAAGTTTAAGAAGCAAATCCCTGACGCTTCCACGTACTCCAGCTaGAGCCGCTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: GLPSQTPPQKFKKQIPDASTYSS*SRSRDA
Trigger: AGCGTCCCTGGAGCGGCTGCAGCTGGAGTACGTGGA...AGCGTCAGGGATTTGCTTCTTAAACTTCTGCGGAGGGGTTTGGCTTGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGAAGCTCCAGCGTGATGTaGCCCAGTACATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGSSSVM*PSTWPS
Trigger: GGATGGCCATGTACTGGGGCACATCACGCTGGAGCT...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGTCCTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPPACGGASCHTCPRVSVLHKLF*IGSTQK
Trigger: CTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAG...GACAGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCGTTTATTGCCCAGAATaGTGTCGATCTCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAVYCPE*CRSRGR
Trigger: TCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGTGCTGTAGGGTTTATTaGCCAGAATGCTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: ASEQRRGGNRELSGWGTRCCRVY*PECCRS
Trigger: AGATCGACAGCATTCTGGGCAATAAACCCTACAGCA...CCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTAGTCTGAATGGCATCTaGTGCTTACGCTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: QVWYFLLGHCRALSRKLASLNGI*CLRSAD
Trigger: GTCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACT...AGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTATCTCATCCGTGATCTaGCCCCCGAAGGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGISSVI*PPKVTH
Trigger: ATGGGTGACCTTCGGGGGCCAGATCACGGATGAGAT...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCCCTGGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTTGGGGTCTGGGCGGTTaGCAAAAACCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: PLASVVGQYPVKKRQAASWGLGG*QKPHPR
Trigger: ACGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCA...AGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp AGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTCTTCCATGGGCGTGTTaGGGTCTGGGCGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SPHHEPTAPVQQRYWKVCLPWAC*GLGGWQ
Trigger: TTGCCAACCGCCCAGACCCCAACACGCCCATGGAAG...ACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAAGCAGGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCAGAGGGGACCAGGTCATaGCACCTACTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: QAGPRPAVWTGLVLPAGPEGTRS*HLLLSC
Trigger: ACAAGATAGGAGTAGGTGCCATGACCTGGTCCCCTC...TGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCCTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGGCTCTGGAGTAGGGTaGGATCCCGCTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: WNSRSERTETRREPGTVRGSGVG*DPAVIL
Trigger: AAGTATGACAGCGGGATCCCACCCTACTCCAGAGCC...CCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGTCAGGCACCAGGCTATaGCCAGCTGGGGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: CSNHQDSGRRVHTPLLRWSGTRL*PAGVGC
Trigger: GCACCCTACCCCAGCTGGCCATAGCCTGGTGCCTGA...CCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCCATGGAGCTCCAGCGTaGTGTGCCCCAGTACATGGC +
Preference number: 4 (lower is better)
Translates to: LHLALEQQKRANRDEEGTHGAPA*CAPVHG
Trigger: GCCATGTACTGGGGCACATCACGCTGGAGCTCCATG...GGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CAGAGCATCACAAAACCATGGGATGGGGCCTCCAGGCAGTGTGTACTGACCAATTCCACGTACTCCAGCTaGAGCCGCTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: QSITKPWDGASRQCVLTNSTYSS*SRSRDA
Trigger: AGCGTCCCTGGAGCGGCTGCAGCTGGAGTACGTGGA...ATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGATCCACGTACTCCAGCTaGAGCCGCTCCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: PHSAFGFGTAEASEQRRGSTYSS*SRSRDA
Trigger: AGCGTCCCTGGAGCGGCTGCAGCTGGAGTACGTGGA...TCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CAGAGCATCACAAAACCATGGGATGGGGCCTCCAGGCAGTGTGTACTGACCAATTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QSITKPWDGASRQCVLTNSFSLA*WRRPSS
Trigger: TGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGA...ATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACCGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LALEQQKRANRDEEGTGNRSAMA*SSFSLA
Trigger: GGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACG...GTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATCGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYRSAMA*SSFSLA
Trigger: GGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACG...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTTGGAAGGACCTGTATTaGTCCAATGTTCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: LLPPACGGASCHTCPRVSWKDLY*SNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA...AGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCAGATCCCAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GTQVRCCALGPWAPSARSQLCAS*KGLSQS
Trigger: AGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTG...GGATCTGGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGCAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALQLCAS*KGLSQS
Trigger: AGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTG...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGATGGGGTCTGGGCGGTTaGCAAAAACCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: QLGSYVSQGSVGMWGRSRWGLGG*QKPHPR
Trigger: ACGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCA...TCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGGGGCGTGTTGGGGTCTaGGCGGTTGGCAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: CSNHQDSGRRVHTPLLRWGRVGV*AVGKNH
Trigger: GTGGTTTTTGCCAACCGCCCAGACCCCAACACGCCC...CCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp AACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGGCTCTTCTTCCATGGGCGTGTTaGGGTCTGGGCGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NHQDSGRRVHTPLLRWALLPWAC*GLGGWQ
Trigger: TTGCCAACCGCCCAGACCCCAACACGCCCATGGAAG...AAGAGCCCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGCACGGTCTCTTCCATaGGCGTGTTGGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PHSAFGFGTAEASEQRRGARSLP*ACWGLG
Trigger: GCCCAGACCCCAACACGCCCATGGAAGAGACCGTGC...TCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
CDS-3UTR CCA 90 bp TGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGAGGGGACCAGGTCATaGCACCTACTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: WNSRSERTETRREPGTVREGTRS*HLLLSC
Trigger: ACAAGATAGGAGTAGGTGCCATGACCTGGTCCCCTC...CCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCCCTGGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGAGGGGACCAGGTCATaGCACCTACTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: PLASVVGQYPVKKRQAASEGTRS*HLLLSC
Trigger: ACAAGATAGGAGTAGGTGCCATGACCTGGTCCCCTC...AGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTTTTGAGATGGGCTCTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCGGCTCTGGAGTAGGGTaGGATCCCGCTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: LLRWALGGPSCSKDETSTGSGVG*DPAVIL
Trigger: AAGTATGACAGCGGGATCCCACCCTACTCCAGAGCC...GGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAGAGCCCATCTCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTGAGAGCAATATGGTCTTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: PLPRYSRGIGRSVRAIWSFSLAC*RRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAA...AGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGACAGGCTATGGCCAGCTaGGGTAGGGTGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EPHSAFGFGTAEASEQRRQAMAS*GRVQPR
Trigger: CCTGGGCTGCACCCTACCCCAGCTGGCCATAGCCTG...TCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCAGGCTATGGCCAGCTaGGGTAGGGTGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNQAMAS*GRVQPR
Trigger: CCTGGGCTGCACCCTACCCCAGCTGGCCATAGCCTG...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGATCAGGCACCAGGCTATaGCCAGCTGGGGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PHSAFGFGTAEASEQRRGSGTRL*PAGVGC
Trigger: GCACCCTACCCCAGCTGGCCATAGCCTGGTGCCTGA...TCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACTTCATGCCTGTGCGCTaGGCGGTGCAGCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNFMPVR*AVQPSR
Trigger: CCTGGACGGCTGCACCGCCCAGCGCACAGGCATGAA...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR TCA 90 bp CAGAGCATCACAAAACCATGGGATGGGGCCTCCAGGCAGTGTGTACTGACCAATCATGGAGCTCCAGCGTaGTGTGCCCCAGTACATGGC +
Preference number: 4 (lower is better)
Translates to: QSITKPWDGASRQCVLTNHGAPA*CAPVHG
Trigger: GCCATGTACTGGGGCACATCACGCTGGAGCTCCATG...ATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGATCCCTCTGGAACATGTaGTATTCCGCTTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGSLWNM*YSACSQ
Trigger: CTGCGAGCAAGCGGAATATCACATGTTCCAGAGGGA...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp ACGTTATGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGCCAGAAGCACGGAGCTaGCACCCTCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TLCMYMRRAGTQVRCCALPEARS*HPHSSG
Trigger: GCCTGAGGAATGAGGGTGTCAGCTCCGTGCTTCTGG...CAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACATAACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp GCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGAATGATGAATGTCCGTaGCTTGAAGGAACTAAATGG +
Preference number: 4 (lower is better)
Translates to: ASEQRRGGNRELSGWGTRNDECP*LEGTKW
Trigger: CCATTTAGTTCCTTCAAGTCACGGACATTCATCATT...CCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp AACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NHTLHLALEQQKRANRDESFSLA*WRRPSS
Trigger: TGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGA...CTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGCGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CSNHQDSGRRVHTPLLRWRSAMA*SSFSLA
Trigger: GGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACG...CCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp AGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGTGCTGTAGGGTTTATTaGCCAGAATGCTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: SRSERTETRREPGTVRVGCCRVY*PECCRS
Trigger: AGATCGACAGCATTCTGGGCAATAAACCCTACAGCA...CCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCATGCTGTAGGGTTTATTaGCCAGAATGCTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASCCRVY*PECCRS
Trigger: AGATCGACAGCATTCTGGGCAATAAACCCTACAGCA...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCACAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASQLCAS*KGLSQS
Trigger: AGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTG...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCAAAGTACCTGGTGTCGGGCGTGTTGGGGTCTaGGCGGTTGGCAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: QDLGRMGSRPALSKVPGVGRVGV*AVGKNH
Trigger: GTGGTTTTTGCCAACCGCCCAGACCCCAACACGCCC...GACACCAGGTACTTTGCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGACTTCCATGGGCGTGTTaGGGTCTGGGCGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PHSAFGFGTAEASEQRRGLPWAC*GLGGWQ
Trigger: TTGCCAACCGCCCAGACCCCAACACGCCCATGGAAG...TCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACGCACGGTCTCTTCCATaGGCGTGTTGGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNARSLP*ACWGLG
Trigger: GCCCAGACCCCAACACGCCCATGGAAGAGACCGTGC...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
CDS-3UTR CCA 90 bp GGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGGAGGGGACCAGGTCATaGCACCTACTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: GFGTAEASEQRRGGNRELEGTRS*HLLLSC
Trigger: ACAAGATAGGAGTAGGTGCCATGACCTGGTCCCCTC...CAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGTTTTCCTGTCTCTTGCACATCACCAGCAGGAGCTTAGCTCTGAGGTGTGGTTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: LFSCLLHITSRSLALRCGFSLAC*RRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAA...ACCACACCTCAGAGCTAAGCTCCTGCTGGTGATGTGCAAGAGACAGGAAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACGCAGTTCCTTCAGCTTaGCCTGCTGGCGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNAVPSA*PAGGDP
Trigger: AGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGC...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACTCAGGCACCAGGCTATaGCCAGCTGGGGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: VNHTLHLALEQQKRANRDSGTRL*PAGVGC
Trigger: GCACCCTACCCCAGCTGGCCATAGCCTGGTGCCTGA...GTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp GTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACCCGAGTAGGCCTCCATaGTCTCCATGGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VNHTLHLALEQQKRANRDPSRPP*SPWSSS
Trigger: GCTGGAGCTCCATGGAGATCATGGAGGCCTACTCGG...GTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CCCCTGTCCTCACCTCTGCCCAGCCTTAAGAGCAGCAAGGAGCAGCCTTGTAATTCCCTCTGGAACATGTaGTATTCCGCTTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PLSSPLPSLKSSKEQPCNSLWNM*YSACSQ
Trigger: CTGCGAGCAAGCGGAATATCACATGTTCCAGAGGGA...ATTACAAGGCTGCTCCTTGCTGCTCTTAAGGCTGGGCAGAGGTGAGGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CTGTTTTCCTGTCTCTTGCACATCACCAGCAGGAGCTTAGCTCTGAGGTGTGGTCCAGAAGCACGGAGCTaGCACCCTCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LFSCLLHITSRSLALRCGPEARS*HPHSSG
Trigger: GCCTGAGGAATGAGGGTGTCAGCTCCGTGCTTCTGG...ACCACACCTCAGAGCTAAGCTCCTGCTGGTGATGTGCAAGAGACAGGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp TTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACATGCAGGGTCCAGTCTaGATGGCATCTGCTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LALEQQKRANRDEEGTGNMQGPV*MASAAY
Trigger: GTAAGCAGCAGATGCCATTCAGACTGGACCCTGCAT...GTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR GCA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTACTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLLHKLF*IGSTQK
Trigger: CTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAG...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GAGGCTGGTCTCCTAGGGAGGCAGCTGGGTAGGACCCTGTCCCCCAGAGCATCATGGAAGGACCTGTATTaGTCCAATGTTCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: EAGLLGRQLGRTLSPRASWKDLY*SNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA...TGATGCTCTGGGGGACAGGGTCCTACCCAGCTGCCTCCCTAGGAGACCAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGTGGAAGGACCTGTATTaGTCCAATGTTCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: GPRPAVWTGLVLPAGPLQWKDLY*SNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA...CTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGTTTATTGCCCAGAATaGTGTCGATCTCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGVYCPE*CRSRGR
Trigger: TCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTCTGAATGGCATCTGCTaGTTACGCTCCGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPLNGIC*LRSADS
Trigger: AGAGTCTGCGGAGCGTAAGCAGCAGATGCCATTCAG...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR GCA 90 bp TGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGTCCAGGGAAAGGCCGTaGATTTGGAGGAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CSNHQDSGRRVHTPLLRWSRERP*IWRKLS
Trigger: GGAGAGCTTCCTCCAAATGCACGGCCTTTCCCTGGA...CCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CCA 90 bp GGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCAAAGTACCTGGGGTCTGGGCGGTTaGCAAAAACCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: GRSRPRKNGIQASLEQSTWGLGG*QKPHPR
Trigger: ACGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCA...GGTACTTTGCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGGCGTGTTGGGGTCTaGGCGGTTGGCAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: EPHSAFGFGTAEASEQRRGRVGV*AVGKNH
Trigger: GTGGTTTTTGCCAACCGCCCAGACCCCAACACGCCC...TCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGGGCGTGTTGGGGTCTaGGCGGTTGGCAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: VNHTLHLALEQQKRANRDGRVGV*AVGKNH
Trigger: GTGGTTTTTGCCAACCGCCCAGACCCCAACACGCCC...GTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGTTTTCCTGTCTCTTGCACATCACCAGCAGGAGCTTAGCTCTGAGGTGTGGTGGGCGTGTTGGGGTCTaGGCGGTTGGCAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: LFSCLLHITSRSLALRCGGRVGV*AVGKNH
Trigger: GTGGTTTTTGCCAACCGCCCAGACCCCAACACGCCC...ACCACACCTCAGAGCTAAGCTCCTGCTGGTGATGTGCAAGAGACAGGAAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp AACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGCTTCCATGGGCGTGTTaGGGTCTGGGCGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NHTLHLALEQQKRANRDELPWAC*GLGGWQ
Trigger: TTGCCAACCGCCCAGACCCCAACACGCCCATGGAAG...CTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GAGACCAAAGGGCTCGGGTTTTATTTGCCATTCCATAAATACGGGGCCGCACCTCTTCCATGGGCGTGTTaGGGTCTGGGCGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ETKGLGFYLPFHKYGAAPLPWAC*GLGGWQ
Trigger: TTGCCAACCGCCCAGACCCCAACACGCCCATGGAAG...AGGTGCGGCCCCGTATTTATGGAATGGCAAATAAAACCCGAGCCCTTTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCTTCCATGGGCGTGTTaGGGTCTGGGCGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNLPWAC*GLGGWQ
Trigger: TTGCCAACCGCCCAGACCCCAACACGCCCATGGAAG...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGCCTCCCAAGCCAAACCCCTCCGCAGAAGTTTAAGAAGCAAATCCCTGACGCTGGCTCTGGAGTAGGGTaGGATCCCGCTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: GLPSQTPPQKFKKQIPDAGSGVG*DPAVIL
Trigger: AAGTATGACAGCGGGATCCCACCCTACTCCAGAGCC...AGCGTCAGGGATTTGCTTCTTAAACTTCTGCGGAGGGGTTTGGCTTGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGGCAGTTCCTTCAGCTTaGCCTGCTGGCGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: FPVTSGHSDFPLDVNHTLAVPSA*PAGGDP
Trigger: AGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGC...CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGGCAGACTACTTCAAGGTGAAGAGAAGCTGGCTTGGGCTGGCCTGCAGGCAGCTTGAAGGAACTAAATaGGTCCCCTTCCATGGGCGT +
Preference number: 4 (lower is better)
Translates to: LADYFKVKRSWLGLACRQLEGTK*VPFHGR
Trigger: ACGCCCATGGAAGGGGACCCATTTAGTTCCTTCAAG...CTGCCTGCAGGCCAGCCCAAGCCAGCTTCTCTTCACCTTGAAGTAGTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp TTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATGGAGCTCCAGCGTaGTGTGCCCCAGTACATGGC +
Preference number: 4 (lower is better)
Translates to: FPVTSGHSDFPLDVNHTLHGAPA*CAPVHG
Trigger: GCCATGTACTGGGGCACATCACGCTGGAGCTCCATG...CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp TGTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACCGAGTAGGCCTCCATaGTCTCCATGGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CEPHSAFGFGTAEASEQRPSRPP*SPWSSS
Trigger: GCTGGAGCTCCATGGAGATCATGGAGGCCTACTCGG...TCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp AACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGAGCTCCAGCGTGATGTaGCCCAGTACATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: NHTLHLALEQQKRANRDESSSVM*PSTWPS
Trigger: GGATGGCCATGTACTGGGGCACATCACGCTGGAGCT...CTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGACGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EPHSAFGFGTAEASEQRRRSAMA*SSFSLA
Trigger: GGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACG...TCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTGTTTTCCTGTCTCTTGCACATCACCAGCAGGAGCTTAGCTCTGAGGTGTGGTCGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LFSCLLHITSRSLALRCGRSAMA*SSFSLA
Trigger: GGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACG...ACCACACCTCAGAGCTAAGCTCCTGCTGGTGATGTGCAAGAGACAGGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGAGTTTATTGCCCAGAATaGTGTCGATCTCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGVYCPE*CRSRGR
Trigger: TCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp ACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGTGGGGTCTGGGCGGTTaGCAAAAACCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: TTLCIWLWNSRSERTETRWGLGG*QKPHPR
Trigger: ACGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCA...CCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGATGGGGTCTGGGCGGTTaGCAAAAACCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: PHSAFGFGTAEASEQRRGWGLGG*QKPHPR
Trigger: ACGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCA...TCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAGAGCATCACAAAACCATGGGATGGGGCCTCCAGGCAGTGTGTACTGACCAATTGGGGTCTGGGCGGTTaGCAAAAACCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: QSITKPWDGASRQCVLTNWGLGG*QKPHPR
Trigger: ACGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCA...ATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp AACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGGCTCTTGAGGGGACCAGGTCATaGCACCTACTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: NHQDSGRRVHTPLLRWALEGTRS*HLLLSC
Trigger: ACAAGATAGGAGTAGGTGCCATGACCTGGTCCCCTC...AAGAGCCCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCGAAAGGCCGTGCATTTaGAGGAAGCTCTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: VCGAGQDLGRMGSRPALSERPCI*RKLSMF
Trigger: GAACATGGAGAGCTTCCTCCAAATGCACGGCCTTTC...GCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCCCCACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR TCA 90 bp CCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTGAGAGCAATATGGTCTTCCCTCTGGAACATGTaGTATTCCGCTTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PLPRYSRGIGRSVRAIWSSLWNM*YSACSQ
Trigger: CTGCGAGCAAGCGGAATATCACATGTTCCAGAGGGA...AGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTTTTGAGATGGGCTCTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLRWALGGPSCSKDETSTLHKLF*IGSTQK
Trigger: CTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAG...GGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAGAGCCCATCTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTTGGAAGGACCTGTATTaGTCCAATGTTCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: ASVVGQYPVKKRQAASGGWKDLY*SNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA...ACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTAGAATTTCCGGTTTATTGCCCAGAATaGTGTCGATCTCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: PSCSKDETSTRPWLLEFPVYCPE*CRSRGR
Trigger: TCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC...CGGAAATTCTAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTGCTGTAGGGTTTATTaGCCAGAATGCTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: GFGTAEASEQRRGGNRELCCRVY*PECCRS
Trigger: AGATCGACAGCATTCTGGGCAATAAACCCTACAGCA...CAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTAGAATTTCCGCCCGAAGGCCAGATTTaGCCAGATTCCTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: PSCSKDETSTRPWLLEFPPEGQI*PDSCKT
Trigger: AGTTTTACAGGAATCTGGGCAAATCTGGCCTTCGGG...CGGAAATTCTAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105648.10
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATCCCGAAGGCCAGATTTaGCCAGATTCCTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYPEGQI*PDSCKT
Trigger: AGTTTTACAGGAATCTGGGCAAATCTGGCCTTCGGG...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGCTCTGGAGTAGGGTaGGATCCCGCTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: EPHSAFGFGTAEASEQRRGSGVG*DPAVIL
Trigger: AAGTATGACAGCGGGATCCCACCCTACTCCAGAGCC...TCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp AACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGGCTCTGGAGTAGGGTaGGATCCCGCTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: NHTLHLALEQQKRANRDEGSGVG*DPAVIL
Trigger: AAGTATGACAGCGGGATCCCACCCTACTCCAGAGCC...CTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACGGCTCTGGAGTAGGGTaGGATCCCGCTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNGSGVG*DPAVIL
Trigger: AAGTATGACAGCGGGATCCCACCCTACTCCAGAGCC...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCAAAGTACCCTTGAAGGAACTAAATaGGTCCCCTTCCATGGGCGT +
Preference number: 4 (lower is better)
Translates to: GRSRPRKNGIQASLEQSTLEGTK*VPFHGR
Trigger: ACGCCCATGGAAGGGGACCCATTTAGTTCCTTCAAG...GGTACTTTGCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACCCTATATTTCATCCCTaGCTGCTTCAAGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LALEQQKRANRDEEGTGNPIFHP*LLQAGV
Trigger: GACACCAGCTTGAAGCAGCCAGGGATGAAATATAGG...GTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS-3UTR TCA 90 bp CAGAGCATCACAAAACCATGGGATGGGGCCTCCAGGCAGTGTGTACTGACCAATCTTGAGGCTGTGCTCTaGACACACGAAAGATACCTG +
Preference number: 4 (lower is better)
Translates to: QSITKPWDGASRQCVLTNLEAVL*THERYL
Trigger: CAGGTATCTTTCGTGTGTTCAGAGCACAGCCTCAAG...ATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS-3UTR CCA 90 bp CCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATATCTCATCCGTGATCTaGCCCCCGAAGGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: PVTSGHSDFPLDVNHTLHISSVI*PPKVTH
Trigger: ATGGGTGACCTTCGGGGGCCAGATCACGGATGAGAT...ATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACCAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LALEQQKRANRDEEGTGNQLCAS*KGLSQS
Trigger: AGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTG...GTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACGAGGGGACCAGGTCATaGCACCTACTCCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNEGTRS*HLLLSC
Trigger: ACAAGATAGGAGTAGGTGCCATGACCTGGTCCCCTC...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGACTGGAGCTGTCTTTTaGGACTCCCATAACGAGTAC +
Preference number: 4 (lower is better)
Translates to: CSNHQDSGRRVHTPLLRWTGAVF*DSHNEY
Trigger: GTACTCGTTATGGGAGTCCCAAAAGACAGCTCCAGT...CCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000105648.10
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp CCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATTCCCTCTGGAACATGTaGTATTCCGCTTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PVTSGHSDFPLDVNHTLHSLWNM*YSACSQ
Trigger: CTGCGAGCAAGCGGAATATCACATGTTCCAGAGGGA...ATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp TGTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGATCCCTCTGGAACATGTaGTATTCCGCTTGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: CEPHSAFGFGTAEASEQRSLWNM*YSACSQ
Trigger: CTGCGAGCAAGCGGAATATCACATGTTCCAGAGGGA...TCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGATGGAAGGACCTGTATTaGTCCAATGTTCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: SAKARWVCGAGQDLGRMGWKDLY*SNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA...TCCCATTCTTCCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CAGAGCATCACAAAACCATGGGATGGGGCCTCCAGGCAGTGTGTACTGACCAATCCCGAAGGCCAGATTTaGCCAGATTCCTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: QSITKPWDGASRQCVLTNPEGQI*PDSCKT
Trigger: AGTTTTACAGGAATCTGGGCAAATCTGGCCTTCGGG...ATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160884.9
ENSMUST00000238738.2
3UTR CAA 72 bp TTCCCTTTGGATGTGAACCACACTCTGCATTTGGCTTaGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: FPLDVNHTLHLA*EQQKRANRDEE
Trigger: CTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACATCCAAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp ACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGCTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TTLCIWLWNSRSERTETRLHKLF*IGSTQK
Trigger: CTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAG...CCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGACTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PHSAFGFGTAEASEQRRGLHKLF*IGSTQK
Trigger: CTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAG...TCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp GAGACCAAAGGGCTCGGGTTTTATTTGCCATTCCATAAATACGGGGCCGCACCTGTTTATTGCCCAGAATaGTGTCGATCTCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: ETKGLGFYLPFHKYGAAPVYCPE*CRSRGR
Trigger: TCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC...AGGTGCGGCCCCGTATTTATGGAATGGCAAATAAAACCCGAGCCCTTTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CTGTTTTCCTGTCTCTTGCACATCACCAGCAGGAGCTTAGCTCTGAGGTGTGGTGTTTATTGCCCAGAATaGTGTCGATCTCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: LFSCLLHITSRSLALRCGVYCPE*CRSRGR
Trigger: TCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC...ACCACACCTCAGAGCTAAGCTCCTGCTGGTGATGTGCAAGAGACAGGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CAGAGCATCACAAAACCATGGGATGGGGCCTCCAGGCAGTGTGTACTGACCAATCAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: QSITKPWDGASRQCVLTNQLCAS*KGLSQS
Trigger: AGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTG...ATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp ACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGACAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TLHLALEQQKRANRDEEGQLCAS*KGLSQS
Trigger: AGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTG...TCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp CTGTTTTCCTGTCTCTTGCACATCACCAGCAGGAGCTTAGCTCTGAGGTGTGGTACTGGAGCTGTCTTTTaGGACTCCCATAACGAGTAC +
Preference number: 4 (lower is better)
Translates to: LFSCLLHITSRSLALRCGTGAVF*DSHNEY
Trigger: GTACTCGTTATGGGAGTCCCAAAAGACAGCTCCAGT...ACCACACCTCAGAGCTAAGCTCCTGCTGGTGATGTGCAAGAGACAGGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR TCA 90 bp AACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGGCTCTTAATGATGAATGTCCGTaGCTTGAAGGAACTAAATGG +
Preference number: 4 (lower is better)
Translates to: NHQDSGRRVHTPLLRWALNDECP*LEGTKW
Trigger: CCATTTAGTTCCTTCAAGTCACGGACATTCATCATT...AAGAGCCCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp AACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGCTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: NHTLHLALEQQKRANRDELHKLF*IGSTQK
Trigger: CTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAG...CTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp ACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGATGGAAGGACCTGTATTaGTCCAATGTTCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: TLHLALEQQKRANRDEEGWKDLY*SNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA...TCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGATGGAAGGACCTGTATTaGTCCAATGTTCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: PHSAFGFGTAEASEQRRGWKDLY*SNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA...TCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGGTTTATTGCCCAGAATaGTGTCGATCTCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: FPVTSGHSDFPLDVNHTLVYCPE*CRSRGR
Trigger: TCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC...CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATGTTTATTGCCCAGAATaGTGTCGATCTCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: PVTSGHSDFPLDVNHTLHVYCPE*CRSRGR
Trigger: TCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC...ATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp AACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGTGCTGTAGGGTTTATTaGCCAGAATGCTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: NHTLHLALEQQKRANRDECCRVY*PECCRS
Trigger: AGATCGACAGCATTCTGGGCAATAAACCCTACAGCA...CTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNQLCAS*KGLSQS
Trigger: AGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTG...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TGTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGAACTGGAGCTGTCTTTTaGGACTCCCATAACGAGTAC +
Preference number: 4 (lower is better)
Translates to: CEPHSAFGFGTAEASEQRTGAVF*DSHNEY
Trigger: GTACTCGTTATGGGAGTCCCAAAAGACAGCTCCAGT...TCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105648.10
ENSMUST00000160884.9
ENSMUST00000238738.2
3UTR CAA 72 bp AGTGATTTCCCTTTGGATGTGAACCACACTCTGCATTaGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGAC +
Preference number: 4 (lower is better)
Translates to: SDFPLDVNHTLH*ALEQQKRANRD
Trigger: GTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 72 bp CGAGAGTGGGTGTGGAAGACAACCTCTCAGAAACACTaGGTTAACATGTCTTTTGCATCTAGGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: REWVWKTTSQKH*VNMSFASRAPV
Trigger: CACAGGAGCCCTAGATGCAAAAGACATGTTAACCAAGTGTTTCTGAGAGGTTGTCTTCCACACCCACTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FPVTSGHSDFPLDVNHTLLHKLF*IGSTQK
Trigger: CTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAG...CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATTGCTGTAGGGTTTATTaGCCAGAATGCTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: PVTSGHSDFPLDVNHTLHCCRVY*PECCRS
Trigger: AGATCGACAGCATTCTGGGCAATAAACCCTACAGCA...ATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp TTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGTGCTGTAGGGTTTATTaGCCAGAATGCTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: FPVTSGHSDFPLDVNHTLCCRVY*PECCRS
Trigger: AGATCGACAGCATTCTGGGCAATAAACCCTACAGCA...CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CCA 90 bp TTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FPVTSGHSDFPLDVNHTLQLCAS*KGLSQS
Trigger: AGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTG...CAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR GCA 90 bp CCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATTGGAAGGACCTGTATTaGTCCAATGTTCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: PVTSGHSDFPLDVNHTLHWKDLY*SNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA...ATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
3UTR CAA 72 bp AGACAACCTCTCAGAAACACTTGGTTAACATGTCTTTaGCATCTAGGGCTCCTGTGGGCTAAATCCTATGGG +
Preference number: 4 (lower is better)
Translates to: RQPLRNTWLTCL*HLGLLWAKSYG
Trigger: CCCATAGGATTTAGCCCACAGGAGCCCTAGATGCAAAAGACATGTTAACCAAGTGTTTCTGAGAGGTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 90 bp GGGCCACCATGGCCACAGCGCGGAAGCGTCCACGGGTGCCTGGGCTaGGGCTGCTGGCTGCCGAGCGACCCAGCCGGTCTTCGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: GPPWPQRGSVHGCLG*GCWLPSDPAGLRGH
Trigger: GTGGCCCCGAAGACCGGCTGGGTCGCTCGGCAGCCAGCAGCCCCAGCCCAGGCACCCGTGGACGCTTCCGCGCTGTGGCCATGGTGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CCA 90 bp GCTCCGGGCCACCATGGCCACAGCGCGGAAGCGTCCACGGGTGCCTaGGCTGGGGCTGCTGGCTGCCGAGCGACCCAGCCGGTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: APGHHGHSAEASTGA*AGAAGCRATQPVFG
Trigger: CCCGAAGACCGGCTGGGTCGCTCGGCAGCCAGCAGCCCCAGCCCAGGCACCCGTGGACGCTTCCGCGCTGTGGCCATGGTGGCCCGGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS GCA 90 bp CCATGGCCACAGCGCGGAAGCGTCCACGGGTGCCTGGGCTGGGGCTaGTGGCTGCCGAGCGACCCAGCCGGTCTTCGGGGCCACGGCTCT +
Preference number: 5 (lower is better)
Translates to: PWPQRGSVHGCLGWG*WLPSDPAGLRGHGS
Trigger: AGAGCCGTGGCCCCGAAGACCGGCTGGGTCGCTCGGCAGCCAGCAGCCCCAGCCCAGGCACCCGTGGACGCTTCCGCGCTGTGGCCATGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CCA 90 bp TTGGGGCACTCTGCACGGACAGCTGTCCCAGGCTCCGGGCCACCATaGCCACAGCGCGGAAGCGTCCACGGGTGCCTGGGCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LGHSARTAVPGSGPP*PQRGSVHGCLGWGC
Trigger: GCAGCCCCAGCCCAGGCACCCGTGGACGCTTCCGCGCTGTGGCCATGGTGGCCCGGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS GCA 90 bp TCCATGTTCCTGGCCTGGGCGGCTGCCCGCACCTCCCTCAGCCGCTaGAGCTCCAGGGTGTCTGTCTGGCGGACTGGATGCAGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SMFLAWAAARTSLSR*SSRVSVWRTGCRVQ
Trigger: CTGGACCCTGCATCCAGTCCGCCAGACAGACACCCTGGAGCTGCAGCGGCTGAGGGAGGTGCGGGCAGCCGCCCAGGCCAGGAACATGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS GCA 90 bp ATGGCCAGCTGGGGTAGGGTGCAGCCCAGGCGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCCTGCTGGCGGCGACCCTCCTCACTC +
Preference number: 5 (lower is better)
Translates to: MASWGRVQPRRSAMA*SSFSLACWRRPSSL
Trigger: GAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACGCCTGGGCTGCACCCTACCCCAGCTGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp GCCGTGCATTTGGAGGAAGCTCTCCATGTTCCTGGCCTGGGCGGCTaGCCGCACCTCCCTCAGCCGCTGCAGCTCCAGGGTGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: AVHLEEALHVPGLGG*PHLPQPLQLQGVCL
Trigger: CAGACAGACACCCTGGAGCTGCAGCGGCTGAGGGAGGTGCGGGCAGCCGCCCAGGCCAGGAACATGGAGAGCTTCCTCCAAATGCACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS GCA 90 bp ATCCCTGGCTGCTTCAAGCTGGTGTCGTTGCTGTTTGGGGCACTCTaGACGGACAGCTGTCCCAGGCTCCGGGCCACCATGGCCACAGCG +
Preference number: 5 (lower is better)
Translates to: IPGCFKLVSLLFGAL*TDSCPRLRATMATA
Trigger: CGCTGTGGCCATGGTGGCCCGGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CCA 90 bp GCTGCCCGCACCTCCCTCAGCCGCTGCAGCTCCAGGGTGTCTGTCTaGCGGACTGGATGCAGGGTCCAGTCTGAATGGCATCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: AARTSLSRCSSRVSV*RTGCRVQSEWHLLL
Trigger: AAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGACACCCTGGAGCTGCAGCGGCTGAGGGAGGTGCGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CAA 90 bp GCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGTTGGGGTCTGGGCGGTaGGCAAAAACCACATCCACG +
Preference number: 5 (lower is better)
Translates to: ASEQRRGGNRELSGWGTRLGSGR*AKTTST
Trigger: CGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCAA...CCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 90 bp GGGTGCAGCCCAGGCGTTCGGCAATGGCCTGCAGTTCCTTCAGCTTaGCCTGCTGGCGGCGACCCTCCTCACTCAGGATCTTGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GCSPGVRQWPAVPSA*PAGGDPPHSGSCPS
Trigger: TGAAGGACAAGATCCTGAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACGCCTGGGCTGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCTTGGGGTCTGGGCGGTaGGCAAAAACCACATCCACG +
Preference number: 5 (lower is better)
Translates to: RAGTQVRCCALGPWAPSALGSGR*AKTTST
Trigger: CGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCAA...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGGGCCCTGTTGGGGTCTGGGCGGTaGGCAAAAACCACATCCACG +
Preference number: 5 (lower is better)
Translates to: GQLCGQVWYFLLGHCRALLGSGR*AKTTST
Trigger: CGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCAA...CAGGGCCCTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGCATGTGATATTCCGCTaGCTCGCAGATGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: ASEQRRGGNRELSGWGTRHVIFR*LADGRD
Trigger: ATCCCGCCCATCTGCGAGCAAGCGGAATATCACATG...CCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGGCACCTACTCCTATCTaGTGGAACAGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: ASEQRRGGNRELSGWGTRAPTPI*WNSSGS
Trigger: GCTGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGC...CCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CTGCTGCCACCTGCCTGCGGTGGGGCCAGCTGCCACACTTGCCCACGAGTGTCTGCACCTACTCCTATCTaGTGGAACAGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LLPPACGGASCHTCPRVSAPTPI*WNSSGS
Trigger: GCTGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGC...AGACACTCGTGGGCAAGTGTGGCAGCTGGCCCCACCGCAGGCAGGTGGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGTGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCC +
Preference number: 5 (lower is better)
Translates to: WNSRSERTETRREPGTVRCSSFS*ACWRRP
Trigger: GGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCA...CCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CACCCGGCCATGGCTTCTAGAATTTCCGTGAAGGGCCATGGCTGGGGGCAAGTGTGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCC +
Preference number: 5 (lower is better)
Translates to: HPAMASRISVKGHGWGQVCSSFS*ACWRRP
Trigger: GGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCA...CACTTGCCCCCAGCCATGGCCCTTCACGGAAATTCTAGAAGCCATGGCCGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp CAGCCCAGGCGTTCGGCAATGGCCTGCAGTTCCTTCAGCTTGGCCTaGTGGCGGCGACCCTCCTCACTCAGGATCTTGTCCTTCAACCAC +
Preference number: 5 (lower is better)
Translates to: QPRRSAMACSSFSLA*WRRPSSLRILSFNH
Trigger: GTGGTTGAAGGACAAGATCCTGAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACGCCTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp TCCCTCAGCCGCTGCAGCTCCAGGGTGTCTGTCTGGCGGACTGGATaGAGGGTCCAGTCTGAATGGCATCTGCTGCTTACGCTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: SLSRCSSRVSVWRTG*RVQSEWHLLLTLRR
Trigger: TCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGACACCCTGGAGCTGCAGCGGCTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CCA 90 bp CCCAGGCGTTCGGCAATGGCCTGCAGTTCCTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTCAGGATCTTGTCCTTCAACCACTGG +
Preference number: 5 (lower is better)
Translates to: PRRSAMACSSFSLAC*RRPSSLRILSFNHW
Trigger: CCAGTGGTTGAAGGACAAGATCCTGAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCAGATCCCATGTGATATTCCGCTaGCTCGCAGATGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: GTQVRCCALGPWAPSARSHVIFR*LADGRD
Trigger: ATCCCGCCCATCTGCGAGCAAGCGGAATATCACATG...GGATCTGGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCGCACCTACTCCTATCTaGTGGAACAGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAAPTPI*WNSSGS
Trigger: GCTGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGC...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCC +
Preference number: 5 (lower is better)
Translates to: GFGTAEASEQRRGGNRELCSSFS*ACWRRP
Trigger: GGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCA...CAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGCCTTCCATGGGCGTGTaGGGGTCTGGGCGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GSYVSQGSVGMWGRSRPRPSMGV*GSGRLA
Trigger: TGCCAACCGCCCAGACCCCAACACGCCCATGGAAGG...CCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CAAGCAGGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCAATGGCCATCCCCTGGTaGATGACATGGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: QAGPRPAVWTGLVLPAGPMAIPW*MTWVMA
Trigger: GGCCATGACCCATGTCATCAACCAGGGGATGGCCAT...TGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GGCATCCGTTGTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGATGGCCATCCCCTGGTaGATGACATGGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: GIRCRTVSSEEAAGGIWRMAIPW*MTWVMA
Trigger: GGCCATGACCCATGTCATCAACCAGGGGATGGCCAT...CCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGACAACGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CTTGGCGGCCCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTAATGGCCATCCCCTGGTaGATGACATGGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: LGGPSCSKDETSTRPWLLMAIPW*MTWVMA
Trigger: GGCCATGACCCATGTCATCAACCAGGGGATGGCCAT...TAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGGGCCGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CTGCTGGGCCACTGCAGGGCCCTGTCCAGAAAGCTGGCTCTGCTAGCCAGGCATCATGTGATATTCCGCTaGCTCGCAGATGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: LLGHCRALSRKLALLARHHVIFR*LADGRD
Trigger: ATCCCGCCCATCTGCGAGCAAGCGGAATATCACATG...ATGCCTGGCTAGCAGAGCCAGCTTTCTGGACAGGGCCCTGCAGTGGCCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp AGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGGCACCTACTCCTATCTaGTGGAACAGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRSERTETRREPGTVRVGAPTPI*WNSSGS
Trigger: GCTGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGC...CCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CCCCTGTCCTCACCTCTGCCCAGCCTTAAGAGCAGCAAGGAGCAGCCTTGTAATTGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCC +
Preference number: 5 (lower is better)
Translates to: PLSSPLPSLKSSKEQPCNCSSFS*ACWRRP
Trigger: GGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCA...ATTACAAGGCTGCTCCTTGCTGCTCTTAAGGCTGGGCAGAGGTGAGGACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CCCTCCTGCTCTAAGGATGAGACCTCCACCCGGCCATGGCTTCTAGAATTTCCGCCTTCCATGGGCGTGTaGGGGTCTGGGCGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PSCSKDETSTRPWLLEFPPSMGV*GSGRLA
Trigger: TGCCAACCGCCCAGACCCCAACACGCCCATGGAAGG...CGGAAATTCTAGAAGCCATGGCCGGGTGGAGGTCTCATCCTTAGAGCAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp CTCTGGAGTAGGGTGGGATCCCGCTGTCATACTTCCCTGAGACGATaGCGCACGCCAGAGGGGACCAGGTCATGGCACCTACTCCTATCT +
Preference number: 5 (lower is better)
Translates to: LWSRVGSRCHTSLRR*RTPEGTRSWHLLLS
Trigger: AGATAGGAGTAGGTGCCATGACCTGGTCCCCTCTGGCGTGCGGCATCGTCTCAGGGAAGTATGACAGCGGGATCCCACCCTACTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp AGACCCGAAGGCCAGATTTGCCCAGATTCCGATACTTCATGCCTGTaGGCTGGGCGGTGCAGCCGTCCAGGGAAAGGCCGTGCATTTGGA +
Preference number: 5 (lower is better)
Translates to: RPEGQICPDSDTSCL*AGRCSRPGKGRAFG
Trigger: TCCAAATGCACGGCCTTTCCCTGGACGGCTGCACCGCCCAGCGCACAGGCATGAAGTATCGGAATCTGGGCAAATCTGGCCTTCGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CCA 90 bp CGAAGGCCAGATTTGCCCAGATTCCGATACTTCATGCCTGTGCGCTaGGCGGTGCAGCCGTCCAGGGAAAGGCCGTGCATTTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RRPDLPRFRYFMPVR*AVQPSRERPCIWRK
Trigger: CTTCCTCCAAATGCACGGCCTTTCCCTGGACGGCTGCACCGCCCAGCGCACAGGCATGAAGTATCGGAATCTGGGCAAATCTGGCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CAA 90 bp CACCCGGCCATGGCTTCTAGAATTTCCGTGAAGGGCCATGGCTGGGGGCAAGTGATGGCCATCCCCTGGTaGATGACATGGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: HPAMASRISVKGHGWGQVMAIPW*MTWVMA
Trigger: GGCCATGACCCATGTCATCAACCAGGGGATGGCCAT...CACTTGCCCCCAGCCATGGCCCTTCACGGAAATTCTAGAAGCCATGGCCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCTGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCC +
Preference number: 5 (lower is better)
Translates to: LHLALEQQKRANRDEEGTCSSFS*ACWRRP
Trigger: GGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCA...GGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCTCGGGGCCACGGCTCTaGAGGCTGTGCTCTGAACAC +
Preference number: 5 (lower is better)
Translates to: VCGAGQDLGRMGSRPALSSGPRL*RLCSEH
Trigger: GTGTTCAGAGCACAGCCTCAAGAGCCGTGGCCCCGA...GCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCCCCACATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS TCA 90 bp CAGCTCCAGGGTGTCTGTCTGGCGGACTGGATGCAGGGTCCAGTCTaGATGGCATCTGCTGCTTACGCTCCGCAGACTCTCGCTGTATGT +
Preference number: 5 (lower is better)
Translates to: QLQGVCLADWMQGPV*MASAAYAPQTLAVC
Trigger: ACATACAGCGAGAGTCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGACACCCTGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS GCA 90 bp CAGATTTGCCCAGATTCCGATACTTCATGCCTGTGCGCTGGGCGGTaGAGCCGTCCAGGGAAAGGCCGTGCATTTGGAGGAAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: QICPDSDTSCLCAGR*SRPGKGRAFGGSSP
Trigger: TGGAGAGCTTCCTCCAAATGCACGGCCTTTCCCTGGACGGCTGCACCGCCCAGCGCACAGGCATGAAGTATCGGAATCTGGGCAAATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CCA 90 bp CCTATATTTCATCCCTGGCTGCTTCAAGCTGGTGTCGTTGCTGTTTaGGGCACTCTGCACGGACAGCTGTCCCAGGCTCCGGGCCACCAT +
Preference number: 5 (lower is better)
Translates to: PIFHPWLLQAGVVAV*GTLHGQLSQAPGHH
Trigger: ATGGTGGCCCGGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS-3UTR CAA 90 bp GGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGTTGGGGTCTGGGCGGTaGGCAAAAACCACATCCACG +
Preference number: 5 (lower is better)
Translates to: GSYVSQGSVGMWGRSRPRLGSGR*AKTTST
Trigger: CGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCAA...CCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGAATGGCCATCCCCTGGTaGATGACATGGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGMAIPW*MTWVMA
Trigger: GGCCATGACCCATGTCATCAACCAGGGGATGGCCAT...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTGTCCGGGTGGGGCACGAGGTGGAAGACGACAATTTaGGAAGGACCTGTATTGCTC +
Preference number: 5 (lower is better)
Translates to: ASEQRRGGNRELSGWGTRWKTTI*EGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCA...CCTCGTGCCCCACCCGGACAGTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp CCAGATTCCTATATTTCATCCCTGGCTGCTTCAAGCTGGTGTCGTTaGTGTTTGGGGCACTCTGCACGGACAGCTGTCCCAGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: PDSYISSLAASSWCR*CLGHSARTAVPGSG
Trigger: CCCGGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAGGAATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CCA 90 bp TCCAGGGTGTCTGTCTGGCGGACTGGATGCAGGGTCCAGTCTGAATaGCATCTGCTGCTTACGCTCCGCAGACTCTCGCTGTATGTCATG +
Preference number: 5 (lower is better)
Translates to: SRVSVWRTGCRVQSE*HLLLTLRRLSLYVM
Trigger: CATGACATACAGCGAGAGTCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGACACCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CAA 90 bp GGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAGACCTAGGCCACCCCAGAAGATCTaGGTGGTGATGACAAGGCTG +
Preference number: 5 (lower is better)
Translates to: GSYVSQGSVGMWGRSRPRPPQKI*VVMTRL
Trigger: CAGCCTTGTCATCACCACCAAGATCTTCTGGGGTGG...CCTAGGTCTTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCGGGAACTTGGGGTCTGGGCGGTaGGCAAAAACCACATCCACG +
Preference number: 5 (lower is better)
Translates to: LALEQQKRANRDEEGTGNLGSGR*AKTTST
Trigger: CGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCAA...GTTCCCGGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATTTGGGGTCTGGGCGGTaGGCAAAAACCACATCCACG +
Preference number: 5 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYLGSGR*AKTTST
Trigger: CGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCAA...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTATGGCCATCCCCTGGTaGATGACATGGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPMAIPW*MTWVMA
Trigger: GGCCATGACCCATGTCATCAACCAGGGGATGGCCAT...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GTCGGACAGTATCCAGTGAAGAAGCGGCAGGCGGCATCTGGCGGTGACTTTGGACATGTGATATTCCGCTaGCTCGCAGATGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: VGQYPVKKRQAASGGDFGHVIFR*LADGRD
Trigger: ATCCCGCCCATCTGCGAGCAAGCGGAATATCACATG...TCCAAAGTCACCGCCAGATGCCGCCTGCCGCTTCTTCACTGGATACTGTCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GAGACCAAAGGGCTCGGGTTTTATTTGCCATTCCATAAATACGGGGCCGCACCTTGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCC +
Preference number: 5 (lower is better)
Translates to: ETKGLGFYLPFHKYGAAPCSSFS*ACWRRP
Trigger: GGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCA...AGGTGCGGCCCCGTATTTATGGAATGGCAAATAAAACCCGAGCCCTTTGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGATGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCC +
Preference number: 5 (lower is better)
Translates to: EPHSAFGFGTAEASEQRRCSSFS*ACWRRP
Trigger: GGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCA...TCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp AGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGGCTCCGAGTGCCTGGAAGACGACAATTTaGGAAGGACCTGTATTGCTC +
Preference number: 5 (lower is better)
Translates to: RAGTQVRCCALGPWAPSAWKTTI*EGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCA...GGCACTCGGAGCCCAAGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp TCCAGCTGCAGCCGCTCCAGGGACGCTTTCAGTCCTTCAATTATGTaGTTCCTGGAAAGGCCTCTCTCAGTCTCCGCTTTTCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: SSCSRSRDAFSPSIM*FLERPLSVSAFPPQ
Trigger: CTGGGGTGGAAAAGCGGAGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTGAAGGACTGAAAGCGTCCCTGGAGCGGCTGCAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp TGTCTGTCTGGCGGACTGGATGCAGGGTCCAGTCTGAATGGCATCTaGTGCTTACGCTCCGCAGACTCTCGCTGTATGTCATGGACAGCA +
Preference number: 5 (lower is better)
Translates to: CLSGGLDAGSSLNGI*CLRSADSRCMSWTA
Trigger: TGCTGTCCATGACATACAGCGAGAGTCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CAA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATCCACCCCAGAAGATCTaGGTGGTGATGACAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYPPQKI*VVMTRL
Trigger: CAGCCTTGTCATCACCACCAAGATCTTCTGGGGTGG...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATCATGTGATATTCCGCTaGCTCGCAGATGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYHVIFR*LADGRD
Trigger: ATCCCGCCCATCTGCGAGCAAGCGGAATATCACATG...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GTATGTGGGGCAGGTCAAGACCTAGGAAGAATGGGATCCAGGCCAGCCTTGAGCCATGTGATATTCCGCTaGCTCGCAGATGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: VCGAGQDLGRMGSRPALSHVIFR*LADGRD
Trigger: ATCCCGCCCATCTGCGAGCAAGCGGAATATCACATG...GCTCAAGGCTGGCCTGGATCCCATTCTTCCTAGGTCTTGACCTGCCCCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TCATCTGGGCAAAGCCCACATCATGAGCCCACTGCCCCGGTACAGCAGAGGTATGCACCTACTCCTATCTaGTGGAACAGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SSGQSPHHEPTAPVQQRYAPTPI*WNSSGS
Trigger: GCTGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGC...ATACCTCTGCTGTACCGGGGCAGTGGGCTCATGATGTGGGCTTTGCCCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GGGCCAAGGCCAGCTGTGTGGACAGGTCTGGTACTTCCTGCTGGGCCACTGCAGTGGAAGACGACAATTTaGGAAGGACCTGTATTGCTC +
Preference number: 5 (lower is better)
Translates to: GPRPAVWTGLVLPAGPLQWKTTI*EGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCA...CTGCAGTGGCCCAGCAGGAAGTACCAGACCTGTCCACACAGCTGGCCTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GGCCTCCCAAGCCAAACCCCTCCGCAGAAGTTTAAGAAGCAAATCCCTGACGCTCCACCCCAGAAGATCTaGGTGGTGATGACAAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLPSQTPPQKFKKQIPDAPPQKI*VVMTRL
Trigger: CAGCCTTGTCATCACCACCAAGATCTTCTGGGGTGG...AGCGTCAGGGATTTGCTTCTTAAACTTCTGCGGAGGGGTTTGGCTTGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TGCTCTAACCACCAGGACTCTGGGAGAAGGGTGCACACCCCTCTTTTGAGATGGCATGTGATATTCCGCTaGCTCGCAGATGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: CSNHQDSGRRVHTPLLRWHVIFR*LADGRD
Trigger: ATCCCGCCCATCTGCGAGCAAGCGGAATATCACATG...CCATCTCAAAAGAGGGGTGTGCACCCTTCTCCCAGAGTCCTGGTGGTTAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS TCA 90 bp GACATGGGTCATGGCCCGCACGGTCTCTTCAATGATGAATGTCCGTaGCTTGAAGGAACTAAATGGGTCCCCTTCCATGGGCGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: DMGHGPHGLFNDECP*LEGTKWVPFHGRVG
Trigger: CCCAACACGCCCATGGAAGGGGACCCATTTAGTTCCTTCAAGTCACGGACATTCATCATTGAAGAGACCGTGCGGGCCATGACCCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp ACCCGAAGGCCAGATTTGCCCAGATTCCTATATTTCATCCCTGGCTaGTTCAAGCTGGTGTCGTTGCTGTTTGGGGCACTCTGCACGGAC +
Preference number: 5 (lower is better)
Translates to: TRRPDLPRFLYFIPG*FKLVSLLFGALCTD
Trigger: GTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAGGAATCTGGGCAAATCTGGCCTTCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CCA 90 bp GGAGACCCGAAGGCCAGATTTGCCCAGATTCCTATATTTCATCCCTaGCTGCTTCAAGCTGGTGTCGTTGCTGTTTGGGGCACTCTGCAC +
Preference number: 5 (lower is better)
Translates to: GDPKARFAQIPIFHP*LLQAGVVAVWGTLH
Trigger: GTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAGGAATCTGGGCAAATCTGGCCTTCGGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS-3UTR CAA 90 bp GGAGGTCGATTCCCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACATGGCCATCCCCTGGTaGATGACATGGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: GGRFPVTSGHSDFPLDVNMAIPW*MTWVMA
Trigger: GGCCATGACCCATGTCATCAACCAGGGGATGGCCAT...GTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGGGAATCGACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp ACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGGCACCTACTCCTATCTaGTGGAACAGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: TTLCIWLWNSRSERTETRAPTPI*WNSSGS
Trigger: GCTGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGC...CCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp ACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAGCACCTACTCCTATCTaGTGGAACAGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: TLHLALEQQKRANRDEEGAPTPI*WNSSGS
Trigger: GCTGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGC...TCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GCCAGCTGGGTAGCTATGTCAGCCAAGGCTCGGTGGGTATGTGGGGCAGGTCAAATGAATGTCCGTGACTaGAAGGAACTAAATGGGTCC +
Preference number: 5 (lower is better)
Translates to: ASWVAMSAKARWVCGAGQMNVRD*KELNGS
Trigger: GGACCCATTTAGTTCCTTCAAGTCACGGACATTCAT...TTGACCTGCCCCACATACCCACCGAGCCTTGGCTGACATAGCTACCCAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 90 bp CAGATTTGCCCAGATTCCTATATTTCATCCCTGGCTGCTTCAAGCTaGTGTCGTTGCTGTTTGGGGCACTCTGCACGGACAGCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: QICPDSYISSLAASS*CRCCLGHSARTAVP
Trigger: TGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAGGAATCTGGGCAAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS-3UTR CAA 90 bp AACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGCCACCCCAGAAGATCTaGGTGGTGATGACAAGGCTG +
Preference number: 5 (lower is better)
Translates to: NHTLHLALEQQKRANRDEPPQKI*VVMTRL
Trigger: CAGCCTTGTCATCACCACCAAGATCTTCTGGGGTGG...CTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TGTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGATTGGGGTCTGGGCGGTaGGCAAAAACCACATCCACG +
Preference number: 5 (lower is better)
Translates to: CEPHSAFGFGTAEASEQRLGSGR*AKTTST
Trigger: CGTGGATGTGGTTTTTGCCAACCGCCCAGACCCCAA...TCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TGTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGAATGGCCATCCCCTGGTaGATGACATGGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: CEPHSAFGFGTAEASEQRMAIPW*MTWVMA
Trigger: GGCCATGACCCATGTCATCAACCAGGGGATGGCCAT...TCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATCCACCCCAGAAGATCTaGGTGGTGATGACAAGGCTG +
Preference number: 5 (lower is better)
Translates to: PVTSGHSDFPLDVNHTLHPPQKI*VVMTRL
Trigger: CAGCCTTGTCATCACCACCAAGATCTTCTGGGGTGG...ATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CCTGTCACGTCTGGGCATAGTGATTTCCCTTTGGATGTGAACCACACTCTGCATGCACCTACTCCTATCTaGTGGAACAGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: PVTSGHSDFPLDVNHTLHAPTPI*WNSSGS
Trigger: GCTGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGC...ATGCAGAGTGTGGTTCACATCCAAAGGGAAATCACTATGCCCAGACGTGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp TGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGGGACCTTGGAAGACGACAATTTaGGAAGGACCTGTATTGCTC +
Preference number: 5 (lower is better)
Translates to: CMYMRRAGTQVRCCALGPWKTTI*EGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCA...AGGTCCCAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGGAAAGGCCGTGCATTaGGAGGAAGCTCTCCATGTT +
Preference number: 5 (lower is better)
Translates to: VNHTLHLALEQQKRANRDGKAVH*EEALHV
Trigger: AACATGGAGAGCTTCCTCCAAATGCACGGCCTTTCC...GTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS-3UTR CAA 90 bp CTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACGAGGAGGGAACCTGGAAGACGACAATTTaGGAAGGACCTGTATTGCTC +
Preference number: 5 (lower is better)
Translates to: LHLALEQQKRANRDEEGTWKTTI*EGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCA...GGTTCCCTCCTCGTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp ACGTTATGTATGTACATGAGGAGAGCAGGCACACAGGTGCGCTGCTGTGCCTTGTGGAAGACGACAATTTaGGAAGGACCTGTATTGCTC +
Preference number: 5 (lower is better)
Translates to: TLCMYMRRAGTQVRCCALWKTTI*EGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCA...CAAGGCACAGCAGCGCACCTGTGTGCCTGCTCTCCTCATGTACATACATAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CAGAGCATCACAAAACCATGGGATGGGGCCTCCAGGCAGTGTGTACTGACCAATTGGAAGACGACAATTTaGGAAGGACCTGTATTGCTC +
Preference number: 5 (lower is better)
Translates to: QSITKPWDGASRQCVLTNWKTTI*EGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCA...ATTGGTCAGTACACACTGCCTGGAGGCCCCATCCCATGGTTTTGTGATGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp CCACTGCCCCGGTACAGCAGAGGTATTGGAAGGTCTGTGAGAGCAATATGGTCTTGGAAGACGACAATTTaGGAAGGACCTGTATTGCTC +
Preference number: 5 (lower is better)
Translates to: PLPRYSRGIGRSVRAIWSWKTTI*EGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCA...AGACCATATTGCTCTCACAGACCTTCCAATACCTCTGCTGTACCGGGGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS-3UTR CAA 90 bp GTGAACCACACTCTGCATTTGGCTTTGGAACAGCAGAAGCGAGCGAACAGAGACATGAATGTCCGTGACTaGAAGGAACTAAATGGGTCC +
Preference number: 5 (lower is better)
Translates to: VNHTLHLALEQQKRANRDMNVRD*KELNGS
Trigger: GGACCCATTTAGTTCCTTCAAGTCACGGACATTCAT...GTCTCTGTTCGCTCGCTTCTGCTGTTCCAAAGCCAAATGCAGAGTGTGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 90 bp TTTTGGAAGGACCTGTATTGCTCCAATGTTCTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAGCACGGAGCTGACACCCTCATTCCT +
Preference number: 5 (lower is better)
Translates to: FWKDLYCSNVLHKLF*IGSTQKHGADTLIP
Trigger: AGGAATGAGGGTGTCAGCTCCGTGCTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAGAACATTGGAGCAATACAGGTCCTTCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 90 bp GCCCAGAATGCTGTCGATCTCGTGGACGATGGAAGACGACAATTTTaGAAGGACCTGTATTGCTCCAATGTTCTCCATAAGTTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AQNAVDLVDDGRRQF*KDLYCSNVLHKLFC
Trigger: GCAGAACAACTTATGGAGAACATTGGAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCATCGTCCACGAGATCGACAGCATTCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 90 bp TGCTGTAGGGTTTATTGCCCAGAATGCTGTCGATCTCGTGGACGATaGAAGACGACAATTTTGGAAGGACCTGTATTGCTCCAATGTTCT +
Preference number: 5 (lower is better)
Translates to: CCRVYCPECCRSRGR*KTTILEGPVLLQCS
Trigger: AGAACATTGGAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCATCGTCCACGAGATCGACAGCATTCTGGGCAATAAACCCTACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 72 bp CGCGGAAGCGTCCACGGGTGCCTGGGCTGGGGCTGCTaGCTGCCGAGCGACCCAGCCGGTCTTCGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: RGSVHGCLGWGC*LPSDPAGLRGH
Trigger: GTGGCCCCGAAGACCGGCTGGGTCGCTCGGCAGCCAGCAGCCCCAGCCCAGGCACCCGTGGACGCTTCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CCA 72 bp TCTGCACGGACAGCTGTCCCAGGCTCCGGGCCACCATaGCCACAGCGCGGAAGCGTCCACGGGTGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: SARTAVPGSGPP*PQRGSVHGCLG
Trigger: GCCCAGGCACCCGTGGACGCTTCCGCGCTGTGGCCATGGTGGCCCGGAGCCTGGGACAGCTGTCCGTGCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS GCA 72 bp TGGGGTAGGGTGCAGCCCAGGCGTTCGGCAATGGCCTaGAGTTCCTTCAGCTTGGCCTGCTGGCGGCGACCC +
Preference number: 6 (lower is better)
Translates to: WGRVQPRRSAMA*SSFSLACWRRP
Trigger: GGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACGCCTGGGCTGCACCCTACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CAA 72 bp CCCAGGCGTTCGGCAATGGCCTGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCCTCCTCACTCAGGATC +
Preference number: 6 (lower is better)
Translates to: PRRSAMACSSFS*ACWRRPSSLRI
Trigger: GATCCTGAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACGCCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 72 bp CCAGGCGTTCGGCAATGGCCTGCAGTTCCTTCAGCTTaGCCTGCTGGCGGCGACCCTCCTCACTCAGGATCT +
Preference number: 6 (lower is better)
Translates to: PGVRQWPAVPSA*PAGGDPPHSGS
Trigger: AGATCCTGAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CAA 72 bp GCCGAGCGACCCAGCCGGTCTTCGGGGCCACGGCTCTaGAGGCTGTGCTCTGAACACACGAAAGATACCTGC +
Preference number: 6 (lower is better)
Translates to: AERPSRSSGPRL*RLCSEHTKDTC
Trigger: GCAGGTATCTTTCGTGTGTTCAGAGCACAGCCTCAAGAGCCGTGGCCCCGAAGACCGGCTGGGTCGCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CAA 90 bp AGGGTGCAGCCCAGGCGTTCGGCAATGGCCTGCAGTTCCTTCAGCTaGGCCTGCTGGCGGCGACCCTCCTCACTCAGGATCTTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: RVQPRRSAMACSSFS*ACWRRPSSLRILSF
Trigger: GAAGGACAAGATCCTGAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGAACGCCTGGGCTGCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 72 bp AGGGTGGGATCCCGCTGTCATACTTCCCTGAGACGATaGCGCACGCCAGAGGGGACCAGGTCATGGCACCTA +
Preference number: 6 (lower is better)
Translates to: RVGSRCHTSLRR*RTPEGTRSWHL
Trigger: TAGGTGCCATGACCTGGTCCCCTCTGGCGTGCGGCATCGTCTCAGGGAAGTATGACAGCGGGATCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 72 bp TGCTTCAAGCTGGTGTCGTTGCTGTTTGGGGCACTCTaGACGGACAGCTGTCCCAGGCTCCGGGCCACCATG +
Preference number: 6 (lower is better)
Translates to: CFKLVSLLFGAL*TDSCPRLRATM
Trigger: CATGGTGGCCCGGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CCA 72 bp ACCTCCCTCAGCCGCTGCAGCTCCAGGGTGTCTGTCTaGCGGACTGGATGCAGGGTCCAGTCTGAATGGCAT +
Preference number: 6 (lower is better)
Translates to: TSLSRCSSRVSV*RTGCRVQSEWH
Trigger: ATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGACACCCTGGAGCTGCAGCGGCTGAGGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CCA 72 bp CATCCCTGGCTGCTTCAAGCTGGTGTCGTTGCTGTTTaGGGCACTCTGCACGGACAGCTGTCCCAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: HPWLLQAGVVAV*GTLHGQLSQAP
Trigger: CGGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS TCA 72 bp TCTGGAGTAGGGTGGGATCCCGCTGTCATACTTCCCTaGGACGATGCCGCACGCCAGAGGGGACCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: SGVGWDPAVILP*DDAARQRGPGH
Trigger: ATGACCTGGTCCCCTCTGGCGTGCGGCATCGTCTCAGGGAAGTATGACAGCGGGATCCCACCCTACTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 72 bp TTCCAAGCCCCAGGCAGGAGACCCGAAGGCCAGATTTaGCCAGATTCCTGTAGATCATCCCGGGGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: FQAPGRRPEGQI*PDSCRSSRGSL
Trigger: CAGGCTCCCCCGGGATGATCTACAGGAATCTGGGCAAATCTGGCCTTCGGGTCTCCTGCCTGGGGCTTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030768.10
ENSMUST00000159840.8
CDS GCA 72 bp CGCTGCAGCTCCAGGGTGTCTGTCTGGCGGACTGGATaGAGGGTCCAGTCTGAATGGCATCTGCTGCTTACG +
Preference number: 6 (lower is better)
Translates to: RCSSRVSVWRTG*RVQSEWHLLLT
Trigger: CGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGACACCCTGGAGCTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS GCA 72 bp CCAGATTCCGATACTTCATGCCTGTGCGCTGGGCGGTaGAGCCGTCCAGGGAAAGGCCGTGCATTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: PDSDTSCLCAGR*SRPGKGRAFGG
Trigger: TCCTCCAAATGCACGGCCTTTCCCTGGACGGCTGCACCGCCCAGCGCACAGGCATGAAGTATCGGAATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS GCA 72 bp CCCGAAGGCCAGATTTGCCCAGATTCCGATACTTCATaGCTGTGCGCTGGGCGGTGCAGCCGTCCAGGGAAA +
Preference number: 6 (lower is better)
Translates to: PEGQICPDSDTS*LCAGRCSRPGK
Trigger: TTTCCCTGGACGGCTGCACCGCCCAGCGCACAGGCATGAAGTATCGGAATCTGGGCAAATCTGGCCTTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CCA 72 bp TCGGCAATGGCCTGCAGTTCCTTCAGCTTGGCCTGCTaGCGGCGACCCTCCTCACTCAGGATCTTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: SAMACSSFSLAC*RRPSSLRILSF
Trigger: GAAGGACAAGATCCTGAGTGAGGAGGGTCGCCGCCAGCAGGCCAAGCTGAAGGAACTGCAGGCCATTGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CAA 72 bp TCATCCCTGGCTGCTTCAAGCTGGTGTCGTTGCTGTTaGGGGCACTCTGCACGGACAGCTGTCCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: SSLAASSWCRCC*GHSARTAVPGS
Trigger: GGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS TCA 72 bp GGTGTCTGTCTGGCGGACTGGATGCAGGGTCCAGTCTaGATGGCATCTGCTGCTTACGCTCCGCAGACTCTC +
Preference number: 6 (lower is better)
Translates to: GVCLADWMQGPV*MASAAYAPQTL
Trigger: GAGAGTCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CCA 72 bp CTGAGACGATGCCGCACGCCAGAGGGGACCAGGTCATaGCACCTACTCCTATCTTGTGGAACAGCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: LRRCRTPEGTRS*HLLLSCGTALA
Trigger: TGCCAGAGCTGTTCCACAAGATAGGAGTAGGTGCCATGACCTGGTCCCCTCTGGCGTGCGGCATCGTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 72 bp TCTGTCTGGCGGACTGGATGCAGGGTCCAGTCTGAATaGCATCTGCTGCTTACGCTCCGCAGACTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: SVWRTGCRVQSE*HLLLTLRRLSL
Trigger: CAGCGAGAGTCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCCAGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CCA 72 bp GATTTGCCCAGATTCCGATACTTCATGCCTGTGCGCTaGGCGGTGCAGCCGTCCAGGGAAAGGCCGTGCATT +
Preference number: 6 (lower is better)
Translates to: DLPRFRYFMPVR*AVQPSRERPCI
Trigger: AATGCACGGCCTTTCCCTGGACGGCTGCACCGCCCAGCGCACAGGCATGAAGTATCGGAATCTGGGCAAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CAA 90 bp TCCTATATTTCATCCCTGGCTGCTTCAAGCTGGTGTCGTTGCTGTTaGGGGCACTCTGCACGGACAGCTGTCCCAGGCTCCGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: SYISSLAASSWCRCC*GHSARTAVPGSGPP
Trigger: TGGTGGCCCGGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CAA 90 bp CCCAGATTCCTATATTTCATCCCTGGCTGCTTCAAGCTGGTGTCGTaGCTGTTTGGGGCACTCTGCACGGACAGCTGTCCCAGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: PRFLYFIPGCFKLVS*LFGALCTDSCPRLR
Trigger: CCGGAGCCTGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAGGAATCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS GCA 72 bp GGCGGACTGGATGCAGGGTCCAGTCTGAATGGCATCTaGTGCTTACGCTCCGCAGACTCTCGCTGTATGTCA +
Preference number: 6 (lower is better)
Translates to: GGLDAGSSLNGI*CLRSADSRCMS
Trigger: TGACATACAGCGAGAGTCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS GCA 72 bp GGACTGGATGCAGGGTCCAGTCTGAATGGCATCTGCTaGTTACGCTCCGCAGACTCTCGCTGTATGTCATGG +
Preference number: 6 (lower is better)
Translates to: GLDAGSSLNGIC*LRSADSRCMSW
Trigger: CCATGACATACAGCGAGAGTCTGCGGAGCGTAAGCAGCAGATGCCATTCAGACTGGACCCTGCATCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238715.2
CDS CAA 72 bp CTATATTTCATCCCTGGCTGCTTCAAGCTGGTGTCGTaGCTGTTTGGGGCACTCTGCACGGACAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: LYFIPGCFKLVS*LFGALCTDSCP
Trigger: GGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CAA 90 bp TGGGTCATGGCCCGCACGGTCTCTTCAATGATGAATGTCCGTGACTaGAAGGAACTAAATGGGTCCCCTTCCATGGGCGTGTTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: WVMARTVSSMMNVRD*KELNGSPSMGVLGS
Trigger: AGACCCCAACACGCCCATGGAAGGGGACCCATTTAGTTCCTTCAAGTCACGGACATTCATCATTGAAGAGACCGTGCGGGCCATGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 72 bp TATATTTCATCCCTGGCTGCTTCAAGCTGGTGTCGTTaGTGTTTGGGGCACTCTGCACGGACAGCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: YISSLAASSWCR*CLGHSARTAVP
Trigger: TGGGACAGCTGTCCGTGCAGAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS CCA 72 bp CCAGGGACGCTTTCAGTCCTTCAATTATGTGCTTCCTaGAAAGGCCTCTCTCAGTCTCCGCTTTTCCACCCC +
Preference number: 6 (lower is better)
Translates to: PGTLSVLQLCAS*KGLSQSPLFHP
Trigger: GGGGTGGAAAAGCGGAGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTGAAGGACTGAAAGCGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CAA 72 bp GCCCGCACGGTCTCTTCAATGATGAATGTCCGTGACTaGAAGGAACTAAATGGGTCCCCTTCCATGGGCGTG +
Preference number: 6 (lower is better)
Translates to: ARTVSSMMNVRD*KELNGSPSMGV
Trigger: CACGCCCATGGAAGGGGACCCATTTAGTTCCTTCAAGTCACGGACATTCATCATTGAAGAGACCGTGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS TCA 72 bp TTCCAGCAGCGTAGACCTCCGCCGTATCGAACAGGTTaGTGCCATTATCGTAGGCCAAGGTCATTAGGTGCT +
Preference number: 6 (lower is better)
Translates to: FQQRRPPPYRTG*CHYRRPRSLGA
Trigger: AGCACCTAATGACCTTGGCCTACGATAATGGCATCAACCTGTTCGATACGGCGGAGGTCTACGCTGCTGGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000161236.8
ENSMUST00000161496.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS TCA 72 bp CATGGCCCGCACGGTCTCTTCAATGATGAATGTCCGTaGCTTGAAGGAACTAAATGGGTCCCCTTCCATGGG +
Preference number: 6 (lower is better)
Translates to: HGPHGLFNDECP*LEGTKWVPFHG
Trigger: CCCATGGAAGGGGACCCATTTAGTTCCTTCAAGTCACGGACATTCATCATTGAAGAGACCGTGCGGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 72 bp AGCCGCTCCAGGGACGCTTTCAGTCCTTCAATTATGTaGTTCCTGGAAAGGCCTCTCTCAGTCTCCGCTTTT +
Preference number: 6 (lower is better)
Translates to: SRSRDAFSPSIM*FLERPLSVSAF
Trigger: AAAAGCGGAGACTGAGAGAGGCCTTTCCAGGAAGCACATAATTGAAGGACTGAAAGCGTCCCTGGAGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CAA 90 bp GGAAGGACCTGTATTGCTCCAATGTTCTCCATAAGTTGTTCTGCATaGGAAGCACCCAGAAGCACGGAGCTGACACCCTCATTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: GRTCIAPMFSISCSA*EAPRSTELTPSFLR
Trigger: CCTGAGGAATGAGGGTGTCAGCTCCGTGCTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAGAACATTGGAGCAATACAGGTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS GCA 72 bp CCAGATTTGCCCAGATTCCTATATTTCATCCCTGGCTaGTTCAAGCTGGTGTCGTTGCTGTTTGGGGCACTC +
Preference number: 6 (lower is better)
Translates to: PDLPRFLYFIPG*FKLVSLLFGAL
Trigger: GAGTGCCCCAAACAGCAACGACACCAGCTTGAAGCAGCCAGGGATGAAATATAGGAATCTGGGCAAATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238252.2
CDS GCA 72 bp GACCTGTATTGCTCCAATGTTCTCCATAAGTTGTTCTaGATTGGAAGCACCCAGAAGCACGGAGCTGACACC +
Preference number: 6 (lower is better)
Translates to: DLYCSNVLHKLF*IGSTQKHGADT
Trigger: GGTGTCAGCTCCGTGCTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAGAACATTGGAGCAATACAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CAA 90 bp CGACAATTTTGGAAGGACCTGTATTGCTCCAATGTTCTCCATAAGTaGTTCTGCATTGGAAGCACCCAGAAGCACGGAGCTGACACCCTC +
Preference number: 6 (lower is better)
Translates to: RQFWKDLYCSNVLHK*FCIGSTQKHGADTL
Trigger: GAGGGTGTCAGCTCCGTGCTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAGAACATTGGAGCAATACAGGTCCTTCCAAAATTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CAA 72 bp TGGAAGGACCTGTATTGCTCCAATGTTCTCCATAAGTaGTTCTGCATTGGAAGCACCCAGAAGCACGGAGCT +
Preference number: 6 (lower is better)
Translates to: WKDLYCSNVLHK*FCIGSTQKHGA
Trigger: AGCTCCGTGCTTCTGGGTGCTTCCAATGCAGAACAACTTATGGAGAACATTGGAGCAATACAGGTCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 72 bp GCTGTCGATCTCGTGGACGATGGAAGACGACAATTTTaGAAGGACCTGTATTGCTCCAATGTTCTCCATAAG +
Preference number: 6 (lower is better)
Translates to: AVDLVDDGRRQF*KDLYCSNVLHK
Trigger: CTTATGGAGAACATTGGAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCATCGTCCACGAGATCGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2
CDS CCA 72 bp GTTTATTGCCCAGAATGCTGTCGATCTCGTGGACGATaGAAGACGACAATTTTGGAAGGACCTGTATTGCTC +
Preference number: 6 (lower is better)
Translates to: VYCPECCRSRGR*KTTILEGPVLL
Trigger: GAGCAATACAGGTCCTTCCAAAATTGTCGTCTTCCATCGTCCACGAGATCGACAGCATTCTGGGCAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030768.10
ENSMUST00000105648.10
ENSMUST00000159186.9
ENSMUST00000159840.8
ENSMUST00000160884.9
ENSMUST00000238252.2
ENSMUST00000238715.2
ENSMUST00000238738.2