Pregenerated sensors for KCNA7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038201

Ensembl transcript IDs: ENSMUST00000107774.3

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CCAGCCGCTCGCAGCAGCCGCAGGGCGGCGGGCACCGTGGCTCCATaGCGCGCACAGCCCGGGCGACCGGTGAACGGACGTGTGGCCCCG	+
Preference number: 5 (lower is better) Translates to: PAARSSRRAAGTVAP*RAQPGRPVNGRVAP Trigger: CGGGGCCACACGTCCGTTCACCGGTCGCCCGGGCTGTGCGCGCCATGGAGCCACGGTGCCCGCCGCCCTGCGGCTGCTGCGAGCGGCTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107774.3
CDS TCA 90 bp	CGGCGGGCACCGTGGCTCCATGGCGCGCACAGCCCGGGCGACCGGTaGACGGACGTGTGGCCCCGACGCCGCAGCCACCCCAGTCGGGTG	+
Preference number: 5 (lower is better) Translates to: RRAPWLHGAHSPGDR*TDVWPRRRSHPSRV Trigger: CACCCGACTGGGGTGGCTGCGGCGTCGGGGCCACACGTCCGTTCACCGGTCGCCCGGGCTGTGCGCGCCATGGAGCCACGGTGCCCGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107774.3
CDS TCA 72 bp	CCGTGGCTCCATGGCGCGCACAGCCCGGGCGACCGGTaGACGGACGTGTGGCCCCGACGCCGCAGCCACCCC	+
Preference number: 6 (lower is better) Translates to: PWLHGAHSPGDR*TDVWPRRRSHP Trigger: GGGGTGGCTGCGGCGTCGGGGCCACACGTCCGTTCACCGGTCGCCCGGGCTGTGCGCGCCATGGAGCCACGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107774.3
CDS CCA 72 bp	CGCAGCAGCCGCAGGGCGGCGGGCACCGTGGCTCCATaGCGCGCACAGCCCGGGCGACCGGTGAACGGACGT	+
Preference number: 6 (lower is better) Translates to: RSSRRAAGTVAP*RAQPGRPVNGR Trigger: ACGTCCGTTCACCGGTCGCCCGGGCTGTGCGCGCCATGGAGCCACGGTGCCCGCCGCCCTGCGGCTGCTGCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107774.3
CDS GCA 72 bp	CCGGCTGGCCCACACCCCGCTGCCGGGCTAACTCCGTaGCCAGGGCCACGAAGTAAGGCAGGATGGCCACGA	+
Preference number: 6 (lower is better) Translates to: PAGPHPAAGLTP*PGPRSKAGWPR Trigger: TCGTGGCCATCCTGCCTTACTTCGTGGCCCTGGGCACGGAGTTAGCCCGGCAGCGGGGTGTGGGCCAGCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107774.3
CDS TCA 72 bp	GTGTCTCGAGGCAAAAGACCACGATGGAGACCAGGATaGCGAGTACGGAGACCACGGCGAGCACGCGCGCAG	+
Preference number: 6 (lower is better) Translates to: VSRGKRPRWRPG*RVRRPRRARAQ Trigger: CTGCGCGCGTGCTCGCCGTGGTCTCCGTACTCGTCATCCTGGTCTCCATCGTGGTCTTTTGCCTCGAGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107774.3
CDS CCA 72 bp	TTGCCCTCCAGGGTACCGCAGGGCTGTGTGTCCACATaGCTGTACATCCCTGCCTCTTCGCCCTCTGTCTCC	+
Preference number: 6 (lower is better) Translates to: LPSRVPQGCVST*LYIPASSPSVS Trigger: GGAGACAGAGGGCGAAGAGGCAGGGATGTACAGCCATGTGGACACACAGCCCTGCGGTACCCTGGAGGGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107774.3

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