Pregenerated sensors for KCNA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042604Ensembl transcript IDs: ENSMUST00000037012.3
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTCCTATGTGTTTATACTGAGTGTTCTGAGCTGTATTTTATGGTaGTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTC | + |
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Preference number: 1 (lower is better) Translates to: ASYVFILSVLSCILW*YSCSWCIPCSYSKL Trigger: GAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGTATAAACACATAGGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR GCA 90 bp | CTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTGGTaGATTCCTTGTTCCTACTCCAAACTCAAGAATAGCTATTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LSVLSCILWCYSCSW*IPCSYSKLKNSYCE Trigger: CTCACAATAGCTATTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR CCA 90 bp | AATGCCTCCTATGTGTTTATACTGAGTGTTCTGAGCTGTATTTTATaGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: NASYVFILSVLSCIL*CYSCSWCIPCSYSK Trigger: TTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGTATAAACACATAGGAGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR CCA 90 bp | ATACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTaGTGCATTCCTTGTTCCTACTCCAAACTCAAGAATAGCTATTGT | + |
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Preference number: 1 (lower is better) Translates to: ILSVLSCILWCYSCS*CIPCSYSKLKNSYC Trigger: ACAATAGCTATTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR GCA 90 bp | TGTTGCATATTTAATAAAAAGATCTTAAGCCATAATTGCTGTAGCTaGTGGGTGCCTTATTTCTCCAAGAATTCTCTCTGTGCATGCAAT | + |
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Preference number: 1 (lower is better) Translates to: CCIFNKKILSHNCCS*WVPYFSKNSLCACN Trigger: ATTGCATGCACAGAGAGAATTCTTGGAGAAATAAGGCACCCAGCAGCTACAGCAATTATGGCTTAAGATCTTTTTATTAAATATGCAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR CCA 90 bp | TGCATATTTAATAAAAAGATCTTAAGCCATAATTGCTGTAGCTGCTaGGTGCCTTATTTCTCCAAGAATTCTCTCTGTGCATGCAATAAC | + |
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Preference number: 1 (lower is better) Translates to: CIFNKKILSHNCCSC*VPYFSKNSLCACNN Trigger: GTTATTGCATGCACAGAGAGAATTCTTGGAGAAATAAGGCACCCAGCAGCTACAGCAATTATGGCTTAAGATCTTTTTATTAAATATGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR CAA 90 bp | TTCAGAATGCCAACTTTTTCCATCACGGCACAATTCCCAACAGTGTaGACAATTTACTTACATACCCAGGTACACACACTCTCTCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FRMPTFSITAQFPTV*TIYLHTQVHTLSRS Trigger: AGAGCGAGAGAGTGTGTGTACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGAAAAAGTTGGCATTCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCATCATCGTAACAAACCAATTTCAAAAGATTCGGCTGCTGAACGTTACTTCGAATATATTTGGAGATaGGGGGACAGTGGCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: KHHRNKPISKDSAAERYFEYIWR*GDSGRW Trigger: CCACCTGCCACTGTCCCCCCATCTCCAAATATATTC...GAAGTAACGTTCAGCAGCCGAATCTTTTGAAATTGGTTTGTTACGATGATGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAAAAAGCAGGAATCATGTaGTGTTATTTGTGTGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: MVLQLFVVHSLFLLQTQEKAGIM*CYLCGH Trigger: ATGGCCACACAAATAACAGCACATGATTCCTGCTTT...TTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAATATCCAATGATTGTCATTaGACTGATTGGTGCATTAGT | + |
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Preference number: 2 (lower is better) Translates to: GATVVRGAFLVPTPNSRISNDCH*TDWCIS Trigger: ACTAATGCACCAATCAGTTCAATGACAATCATTGGA...TATTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAATAGAAGAGAACAATAAATaGGACGAAGAACCCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: GATVVRGAFLVPTPNSRIEENNK*DEEPIL Trigger: AAGAATGGGTTCTTCGTCTCATTTATTGTTCTCTTC...TATTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAATGCAGTGCAATCGTTTaGATATCTCATTTTCATAAC | + |
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Preference number: 2 (lower is better) Translates to: MVLQLFVVHSLFLLQTQECSAIV*ISHFHN Trigger: GTTATGAAAATGAGATATGCAAACGATTGCACTGCA...TTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR GCA 72 bp | CTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTGGTaGATTCCTTGTTCCTACTCCAAACTCAAGAATAGC | + |
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Preference number: 3 (lower is better) Translates to: LSCILWCYSCSW*IPCSYSKLKNS Trigger: GCTATTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR TCA 72 bp | TTCCCTAACTCTGATTTAGCAGAGTGCTTTAGCATTTaGGGCGAATCCCCACATTTCGTGTTCTGTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: FPNSDLAECFSI*GESPHFVFCFV Trigger: AACAAAACAGAACACGAAATGTGGGGATTCGCCTCAAATGCTAAAGCACTCTGCTAAATCAGAGTTAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR GCA 72 bp | GTGTTTATACTGAGTGTTCTGAGCTGTATTTTATGGTaGTACAGTTGTTCGTGGTGCATTCCTTGTTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: VFILSVLSCILW*YSCSWCIPCSY Trigger: GTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGTATAAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR CCA 72 bp | GTTCTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTaGTGCATTCCTTGTTCCTACTCCAAACTCAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: VLSCILWCYSCS*CIPCSYSKLKN Trigger: ATTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR CCA 72 bp | TATGTGTTTATACTGAGTGTTCTGAGCTGTATTTTATaGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: YVFILSVLSCIL*CYSCSWCIPCS Trigger: GGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGTATAAACACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR-3UTR CAA 90 bp | AAAAAGATCTTAAGCCATAATTGCTGTAGCTGCTGGGTGCCTTATTTCTCCAAGACCTGTGAACAAAACTaGTTACATTTCCTCCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: KKILSHNCCSCWVPYFSKTCEQN*LHFLQN Trigger: ATTCTGGAGGAAATGTAACAAGTTTTGTTCACAGGT...CTTGGAGAAATAAGGCACCCAGCAGCTACAGCAATTATGGCTTAAGATCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR CCA 72 bp | AATAAAAAGATCTTAAGCCATAATTGCTGTAGCTGCTaGGTGCCTTATTTCTCCAAGAATTCTCTCTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: NKKILSHNCCSC*VPYFSKNSLCA Trigger: TGCACAGAGAGAATTCTTGGAGAAATAAGGCACCCAGCAGCTACAGCAATTATGGCTTAAGATCTTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR-3UTR CAA 90 bp | AAGCATCATCGTAACAAACCAATTTCAAAAGATTCGGCTGCTGAACGTTACTTCCAGAATGTTAGGCATTaGCTATTATATCTCCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: KHHRNKPISKDSAAERYFQNVRH*LLYLPK Trigger: TTTGGGGAGATATAATAGCAAATGCCTAACATTCTG...GAAGTAACGTTCAGCAGCCGAATCTTTTGAAATTGGTTTGTTACGATGATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR GCA 72 bp | TTTAATAAAAAGATCTTAAGCCATAATTGCTGTAGCTaGTGGGTGCCTTATTTCTCCAAGAATTCTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: FNKKILSHNCCS*WVPYFSKNSLC Trigger: ACAGAGAGAATTCTTGGAGAAATAAGGCACCCAGCAGCTACAGCAATTATGGCTTAAGATCTTTTTATTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR GCA 90 bp | ACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTGGTGCATTCCTGCGACAGCAGCAGCTaGAGCTGCCCTGGAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TECSELYFMVLQLFVVHSCDSSS*SCPGVS Trigger: GCTCACTCCAGGGCAGCTGCAGCTGCTGCTGTCGCA...GGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTGGTGCATTCCCAGCTGCAGCTGCCCTaGAGTGAGCGAGTCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TECSELYFMVLQLFVVHSQLQLP*SERVSP Trigger: GGGAGAGACTCGCTCACTCCAGGGCAGCTGCAGCTG...GGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR GCA 90 bp | TTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTACACACACTCTCTCGCAAGGACATGGCCTGCTaGTGCTGGCCATTGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: FPTVLTIYLHTQVHTLSRKDMAC*CWPLPP Trigger: GGGTGGCAATGGCCAGCAGCAGCAGGCCATGTCCTT...GCGAGAGAGTGTGTGTACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | ACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTGGTGCATTCCATGGCTGTTGCACCCTaGGCTCTCGGCACTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: TECSELYFMVLQLFVVHSMAVAP*ALGTHH Trigger: ATGGTGAGTGCCGAGAGCTCAGGGTGCAACAGCCAT...GGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR GCA 90 bp | CACACACACTCACTCTCCTCAGAACCACCTTTACTATTAACATTTTTCCCATTAAGCAGCCGTGGCAGCTaGGACAGCAGCAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTHSLSSEPPLLLTFFPLSSRGS*DSSSCS Trigger: GCTGCAGCTGCTGCTGTCGCAGCTGCCACGGCTGCT...TAATGGGAAAAATGTTAATAGTAAAGGTGGTTCTGAGGAGAGTGAGTGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR CCA 90 bp | ATGGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAAGGATGGCAAAGGACATaGCCTGCTGCTGCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: MVLQLFVVHSLFLLQTQEGWQRT*PAAAGH Trigger: ATGGCCAGCAGCAGCAGGCCATGTCCTTTGCCATCC...TTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | TCTCTCGCTCTCTCACACACACACACTCACTCTCCTCAGAACCACCTTTACTATATCAGGTCTGAGCAATaGGGAAAACTGCTCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLALSHTHTHSPQNHLYYIRSEQ*GKLLCL Trigger: CAGGCAGAGCAGTTTTCCTCATTGCTCAGACCTGAT...ATAGTAAAGGTGGTTCTGAGGAGAGTGAGTGTGTGTGTGTGAGAGAGCGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTGGTGCATTCCAAAGGGGACATTGACTaGTCTCTTCAGGCGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TECSELYFMVLQLFVVHSKGDID*SLQAAS Trigger: GGAGGCCGCCTGAAGAGACCAGTCAATGTCCCCTTT...GGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | AAGCATCATCGTAACAAACCAATTTCAAAAGATTCGGCTGCTGAACGTTACTTCCATCCTCCCGGAACTTaGGCAGGGCTTCCTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KHHRNKPISKDSAAERYFHPPGT*AGLPLP Trigger: TGGGAGAGGAAGCCCTGCTCAAGTTCCGGGAGGATG...GAAGTAACGTTCAGCAGCCGAATCTTTTGAAATTGGTTTGTTACGATGATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | TCCATCACGGCACAATTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTAGGTCCCTATCATCCCTaGACTCCGGCAAGGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SITAQFPTVLTIYLHTQVGPYHP*TPARFP Trigger: TGGAAACCTTGCCGGAGTTCAGGGATGATAGGGACC...TACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | TCCATCACGGCACAATTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTAGAATATTGTGTGCCCTaGGTTCTCCAGGTGGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SITAQFPTVLTIYLHTQVEYCVP*VLQVGC Trigger: GCACCCCACCTGGAGAACTCAGGGCACACAATATTC...TACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR GCA 90 bp | TCCATCACGGCACAATTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTAAAGGCATATGGCTGTTaGACCCTGAGCTCTCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SITAQFPTVLTIYLHTQVKAYGC*TLSSRH Trigger: GTGCCGAGAGCTCAGGGTGCAACAGCCATATGCCTT...TACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR GCA 90 bp | GTCATTGAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGGGCCCAGTTCCCGCATaGTGGCTCTTAGGGTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VIELIGALVNIHSMKSLSGPVPA*WLLGCG Trigger: GCCACACCCTAAGAGCCAGCATGCGGGAACTGGGCC...CGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTCAATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR CCA 90 bp | AAGCATCATCGTAACAAACCAATTTCAAAAGATTCGGCTGCTGAACGTTACTTCCCAGTTCCCGCATGCTaGCTCTTAGGGTGTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KHHRNKPISKDSAAERYFPVPAC*LLGCGP Trigger: TGGGCCACACCCTAAGAGCCAGCATGCGGGAACTGG...GAAGTAACGTTCAGCAGCCGAATCTTTTGAAATTGGTTTGTTACGATGATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR CCA 90 bp | GGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAATATTAAGACACCCGCAATaGCACACAGGGACCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: GATVVRGAFLVPTPNSRILRHPQ*HTGTPQ Trigger: TTGTGGGGTCCCTGTGTGCCATTGCGGGTGTCTTAA...TATTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | ATGGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAATTCTTCTCAGTTCGCTaGCGCCTCCTCCTTCTACTT | + |
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Preference number: 4 (lower is better) Translates to: MVLQLFVVHSLFLLQTQEFFSVR*RLLLLL Trigger: AAGTAGAAGGAGGAGGCGTCAGCGAACTGAGAAGAA...TTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | AATGCCAACTTTTTCCATCACGGCACAATTCCCAACAGTGTTGACAATTTACTTGTCACTATAGCGGACTaGACTGTAGCCGCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: NANFFHHGTIPNSVDNLLVTIAD*TVAATT Trigger: GGTGGTGGCGGCTACAGTTCAGTCCGCTATAGTGAC...AAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGAAAAAGTTGGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR CCA 90 bp | AAGCATCATCGTAACAAACCAATTTCAAAAGATTCGGCTGCTGAACGTTACTTCCCTGAGTTCTCCAGGTaGGGTGCCGAGGTGTCATTC | + |
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Preference number: 4 (lower is better) Translates to: KHHRNKPISKDSAAERYFPEFSR*GAEVSF Trigger: GAATGACACCTCGGCACCCCACCTGGAGAACTCAGG...GAAGTAACGTTCAGCAGCCGAATCTTTTGAAATTGGTTTGTTACGATGATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| 3UTR CAA 72 bp | GCATTTGAGGCGAATCCCCACATTTCGTGTTCTGTTTaGTTTTTGCAGCTGCACACACAGACACACACAGAC | + |
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Preference number: 4 (lower is better) Translates to: AFEANPHISCSV*FLQLHTQTHTD Trigger: GTCTGTGTGTGTCTGTGTGTGCAGCTGCAAAAACAAAACAGAACACGAAATGTGGGGATTCGCCTCAAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | AATGCCAACTTTTTCCATCACGGCACAATTCCCAACAGTGTTGACAATTTACTTTCTTTCCCCCGACTGTaGTGGGCTTCATGTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: NANFFHHGTIPNSVDNLLSFPRL*WASCPH Trigger: ATGGGGACATGAAGCCCATCACAGTCGGGGGAAAGA...AAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGAAAAAGTTGGCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR GCA 90 bp | CACACACACTCACTCTCCTCAGAACCACCTTTACTATTAACATTTTTCCCATTAGGCCCTGGCCTGGGCTaGATAACCATAAGGCATATG | + |
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Preference number: 4 (lower is better) Translates to: HTHSLSSEPPLLLTFFPLGPGLG*ITIRHM Trigger: CATATGCCTTATGGTTATGCAGCCCAGGCCAGGGCC...TAATGGGAAAAATGTTAATAGTAAAGGTGGTTCTGAGGAGAGTGAGTGTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR GCA 90 bp | GTCATTGAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGGCAAAGGACATGGCCTaGTGCTGCTGGCCATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VIELIGALVNIHSMKSLSAKDMA*CCWPLP Trigger: TGGCAATGGCCAGCAGCAGCAGGCCATGTCCTTTGC...CGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTCAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR CCA 90 bp | TCCTATGTGTTTATACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTCCAGGACAGACACAATaGCTATACCCCTGGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SYVFILSVLSCILWCYSCPGQTQ*LYPWQG Trigger: GCCCTGCCAGGGGTATAGCCATTGTGTCTGTCCTGG...ACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGTATAAACACATAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR CCA 90 bp | TTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTACACACACTCTCTCGCAGAAGAGTGCTTGGCTaGGACAAGCAAAGCATCGAA | + |
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Preference number: 4 (lower is better) Translates to: FPTVLTIYLHTQVHTLSRRRVLG*DKQSIE Trigger: TTCGATGCTTTGCTTGTCCCAGCCAAGCACTCTTCT...GCGAGAGAGTGTGTGTACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | AAAAAGATCTTAAGCCATAATTGCTGTAGCTGCTGGGTGCCTTATTTCTCCAAGAAAGGGTCGAAGTACTaGGTCCTCTTCTCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KKILSHNCCSCWVPYFSKKGSKY*VLFSGS Trigger: AGACCCTGAGAAGAGGACTCAGTACTTCGACCCTTT...CTTGGAGAAATAAGGCACCCAGCAGCTACAGCAATTATGGCTTAAGATCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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| CDS-3UTR TCA 90 bp | TCCATCACGGCACAATTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTAGTAGGTATGGACAACTaGCTGCGTTTTGTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SITAQFPTVLTIYLHTQVVGMDN*LRFVSA Trigger: AGCTGACACAAAACGCAGTCAGTTGTCCATACCTAC...TACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CCA 90 bp | GGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAATACCACCAAAACGCATCTaGAATGCTTTGGAAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GATVVRGAFLVPTPNSRIPPKRI*NALEMG Trigger: ACCCATTTCCAAAGCATTCCAGATGCGTTTTGGTGG...TATTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR TCA 90 bp | GTCATTGAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGTATCAAAGGGGACATTaGCTGGTCTCTTCAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIELIGALVNIHSMKSLSYQRGH*LVSSGG Trigger: GCCGCCTGAAGAGACCAGTCAATGTCCCCTTTGATA...CGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTCAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR TCA 90 bp | TTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTACACACACTCTCTCGCCACATAATGATTCCTTaGCCCCTTCTTCCATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FPTVLTIYLHTQVHTLSRHIMIP*PLLPSL Trigger: TAGAGATGGAAGAAGGGGTCAAGGAATCATTATGTG...GCGAGAGAGTGTGTGTACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR TCA 90 bp | CACACACACTCACTCTCCTCAGAACCACCTTTACTATTAACATTTTTCCCATTATCATCTCCCTTTCCCTaGCACTTCTCCTCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHSLSSEPPLLLTFFPLSSPFP*HFSSFP Trigger: TGGAAAGGAGGAGAAGTGTCAGGGAAAGGGAGATGA...TAATGGGAAAAATGTTAATAGTAAAGGTGGTTCTGAGGAGAGTGAGTGTGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| 3UTR CAA 72 bp | CCAACTTTTTCCATCACGGCACAATTCCCAACAGTGTaGACAATTTACTTACATACCCAGGTACACACACTC | + |
|
Preference number: 4 (lower is better) Translates to: PTFSITAQFPTV*TIYLHTQVHTL Trigger: GAGTGTGTGTACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGAAAAAGTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| 3UTR CAA 72 bp | ACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTaGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TECSELYFMVLQ*FVVHSLFLLQT Trigger: AGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR TCA 90 bp | AAAAAGATCTTAAGCCATAATTGCTGTAGCTGCTGGGTGCCTTATTTCTCCAAGCTTCAGGCGGCCTCCTaGCTGGTAATAATACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKILSHNCCSCWVPYFSKLQAAS*LVIIQN Trigger: ATTTTGTATTATTACCAGTCAGGAGGCCGCCTGAAG...CTTGGAGAAATAAGGCACCCAGCAGCTACAGCAATTATGGCTTAAGATCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR TCA 90 bp | TCCTATGTGTTTATACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTAGTGTCTGGAGAGCTTaGAGATCCGGAATACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SYVFILSVLSCILWCYSCSVWRA*RSGILG Trigger: TCCGAGTATTCCGGATCTTCAAGCTCTCCAGACACT...ACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGTATAAACACATAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR GCA 90 bp | CACACACACTCACTCTCCTCAGAACCACCTTTACTATTAACATTTTTCCCATTAGTATGGACAACTGACTaGGTTTTGTGTCAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHSLSSEPPLLLTFFPLVWTTD*VLCQLG Trigger: ACCCAGCTGACACAAAACGCAGTCAGTTGTCCATAC...TAATGGGAAAAATGTTAATAGTAAAGGTGGTTCTGAGGAGAGTGAGTGTGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CCA 90 bp | GTCATTGAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGTCTCTTCAGAGCCACTaGGCATCAGGTCTGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VIELIGALVNIHSMKSLSSLQSH*ASGLSN Trigger: ATTGCTCAGACCTGATGCCCAGTGGCTCTGAAGAGA...CGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTCAATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTTCGTGGTGCATTCCAGAGTTTCTGGAAACTaGGCCAAAGTTTTCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TECSELYFMVLQLFVVHSRVSGN*AKVFIW Trigger: CCAAATGAAAACTTTGGCCCAGTTTCCAGAAACTCT...GGAATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CCA 90 bp | GTCATTGAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGGGAATGCTTTGGAAATaGGTAGTGGGTTCATCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIELIGALVNIHSMKSLSGMLWK*VVGSSA Trigger: GGCGGATGAACCCACTACCCATTTCCAAAGCATTCC...CGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTCAATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR GCA 90 bp | AAGCATCATCGTAACAAACCAATTTCAAAAGATTCGGCTGCTGAACGTTACTTCTCATTGAATATTGTGTaGCCTGAGTTCTCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHHRNKPISKDSAAERYFSLNIV*PEFSRW Trigger: CCACCTGGAGAACTCAGGGCACACAATATTCAATGA...GAAGTAACGTTCAGCAGCCGAATCTTTTGAAATTGGTTTGTTACGATGATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR GCA 90 bp | GAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGGGCTTCGTTTTTGAAGAAGAGTaGTTGGCTGGGACAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELIGALVNIHSMKSLSGFVFEEE*LAGTSK Trigger: TTTGCTTGTCCCAGCCAAGCACTCTTCTTCAAAAAC...GAAGCCCGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR GCA 90 bp | TTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTACACACACTCTCTCGCAGTCTCCACAGCCTTTaGATTAGAACAGTTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPTVLTIYLHTQVHTLSRSLHSL*IRTVVF Trigger: AAAAACAACTGTTCTAATGCAAAGGCTGTGGAGACT...GCGAGAGAGTGTGTGTACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CCA 90 bp | GAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGGGCTTCGCCAAAGTTTTCATTTaGGTTTCGAAGCGTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ELIGALVNIHSMKSLSGFAKVFI*VSKRRP Trigger: TGGTCTACGCTTCGAAACCCAAATGAAAACTTTGGC...GAAGCCCGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CCA 90 bp | GTCATTGAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGTCCCAACAGAGTTTCTaGAAACTGGGCCAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VIELIGALVNIHSMKSLSSQQSF*KLGQSF Trigger: AAAACTTTGGCCCAGTTTCCAGAAACTCTGTTGGGA...CGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTCAATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CCA 90 bp | TCCTATGTGTTTATACTGAGTGTTCTGAGCTGTATTTTATGGTGCTACAGTTGTGCGTTTTGTGTCAGCTaGGTCTGTTCTTCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYVFILSVLSCILWCYSCAFCVS*VCSSFS Trigger: TGAAAATGAAGAACAGACCCAGCTGACACAAAACGC...ACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAGTATAAACACATAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS GCA 90 bp | CACGTGTCTGATGATGGTGGTGGGGGCCTCCACCAGAACCCCCAGTaGCTTCGACAGCAGCCGTGGCAGCTGCGACAGCAGCAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HVSDDGGGGLHQNPQ*LRQQPWQLRQQQLQ Trigger: CTGCAGCTGCTGCTGTCGCAGCTGCCACGGCTGCTGTCGAAGGCACTGGGGGTTCTGGTGGAGGCCCCCACCACCATCATCAGACACGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS GCA 90 bp | CAGGTGGGGTGCCGAGGTGTCATTCAGCAATCTGCTGTGCCCGCCTaGACTGAGGGCCATAATAAGGTCCCTATCATCCCTGAACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QVGCRGVIQQSAVPA*TEGHNKVPIIPELR Trigger: CCGGAGTTCAGGGATGATAGGGACCTTATTATGGCCCTCAGTGCAGGCGGGCACAGCAGATTGCTGAATGACACCTCGGCACCCCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS GCA 90 bp | GAGTTCTCCAGGTGGGGTGCCGAGGTGTCATTCAGCAATCTGCTGTaGCCGCCTGCACTGAGGGCCATAATAAGGTCCCTATCATCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EFSRWGAEVSFSNLL*PPALRAIIRSLSSL Trigger: CAGGGATGATAGGGACCTTATTATGGCCCTCAGTGCAGGCGGGCACAGCAGATTGCTGAATGACACCTCGGCACCCCACCTGGAGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS GCA 90 bp | TCTCTTCAGAGCCACTGGGCATCAGGTCTGAGCAATGAGGAAAACTaGTCTGCCTGTGGTGGAGTTTCTTCTTCTCAGTTCGCTGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLQSHWASGLSNEEN*SACGGVSSSQFADA Trigger: GGCGTCAGCGAACTGAGAAGAAGAAACTCCACCACAGGCAGAGCAGTTTTCCTCATTGCTCAGACCTGATGCCCAGTGGCTCTGAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS TCA 90 bp | CTCAGGATCTTCTCTTCAGAGCCACTGGGCATCAGGTCTGAGCAATaGGGAAAACTGCTCTGCCTGTGGTGGAGTTTCTTCTTCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRIFSSEPLGIRSEQ*GKLLCLWWSFFFSV Trigger: AACTGAGAAGAAGAAACTCCACCACAGGCAGAGCAGTTTTCCTCATTGCTCAGACCTGATGCCCAGTGGCTCTGAAGAGAAGATCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | TCTCTCGCTCTCTCACACACACACACTCACTCTCCTCAGAACCACCTTTACTATACTTCCACGGCTACCTaGAGGATCATGGGAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLALSHTHTHSPQNHLYYTSTAT*RIMGGV Trigger: TACTCCTCCCATGATCCTCAAGGTAGCCGTGGAAGT...ATAGTAAAGGTGGTTCTGAGGAGAGTGAGTGTGTGTGTGTGAGAGAGCGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | AAGCATCATCGTAACAAACCAATTTCAAAAGATTCGGCTGCTGAACGTTACTTCTCATCCTCCCGGAACTaGAGCAGGGCTTCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KHHRNKPISKDSAAERYFSSSRN*SRASSP Trigger: GGGAGAGGAAGCCCTGCTCAAGTTCCGGGAGGATGA...GAAGTAACGTTCAGCAGCCGAATCTTTTGAAATTGGTTTGTTACGATGATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | TTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTACACACACTCTCTCGCATATCAAAGGGGACATaGACTGGTCTCTTCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FPTVLTIYLHTQVHTLSRISKGT*TGLFRR Trigger: CCGCCTGAAGAGACCAGTCAATGTCCCCTTTGATAT...GCGAGAGAGTGTGTGTACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | TCTCTCGCTCTCTCACACACACACACTCACTCTCCTCAGAACCACCTTTACTATATGAAGAAAGGGTCATaGAATATTGTGTGCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLALSHTHTHSPQNHLYYMKKGS*NIVCPE Trigger: CTCAGGGCACACAATATTCAATGACCCTTTCTTCAT...ATAGTAAAGGTGGTTCTGAGGAGAGTGAGTGTGTGTGTGTGAGAGAGCGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | TCCATCACGGCACAATTCCCAACAGTGTTGACAATTTACTTACATACCCAGGTAACAACTGACTGCGTTTaGTGTCAGCTGGGTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SITAQFPTVLTIYLHTQVTTDCV*CQLGLF Trigger: GAACAGACCCAGCTGACACAAAACGCAGTCAGTTGT...TACCTGGGTATGTAAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | AATCCTCAGGAAGCCCCTGTGATAAAGATGATAATGATTTACAATGACCATTGGGAGTGTCTGGAGAGCTaGAAGATCCGGAATACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: NPQEAPVIKMIMIYNDHWECLES*KIRNTR Trigger: CCGAGTATTCCGGATCTTCAAGCTCTCCAGACACTC...CCAATGGTCATTGTAAATCATTATCATCTTTATCACAGGGGCTTCCTGAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | AAAAAGATCTTAAGCCATAATTGCTGTAGCTGCTGGGTGCCTTATTTCTCCAAGCGCATCTGGAATGCTTaGGAAATGGGTAGTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KKILSHNCCSCWVPYFSKRIWNA*EMGSGF Trigger: GAACCCACTACCCATTTCCAAAGCATTCCAGATGCG...CTTGGAGAAATAAGGCACCCAGCAGCTACAGCAATTATGGCTTAAGATCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | ATGGTGCTACAGTTGTTCGTGGTGCATTCCTTGTTCCTACTCCAAACTCAAGAAGAGCTCCGAAATTTCTaGAGCAAATTAGAAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: MVLQLFVVHSLFLLQTQEELRNF*SKLEGR Trigger: CCTACCTTCTAATTTGCTCAAGAAATTTCGGAGCTC...TTCTTGAGTTTGGAGTAGGAACAAGGAATGCACCACGAACAACTGTAGCACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | AATGCCAACTTTTTCCATCACGGCACAATTCCCAACAGTGTTGACAATTTACTTTCTAGATACTCTGACTaGTCCCCCAGGGAAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NANFFHHGTIPNSVDNLLSRYSD*SPREEE Trigger: TTCTTCTTCCCTGGGGGACAAGTCAGAGTATCTAGA...AAGTAAATTGTCAACACTGTTGGGAATTGTGCCGTGATGGAAAAAGTTGGCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | AATCCTCAGGAAGCCCCTGTGATAAAGATGATAATGATTTACAATGACCATTGGCCACATAATGATTCCTaGACCCCTTCTTCCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NPQEAPVIKMIMIYNDHWPHNDS*TPSSIS Trigger: AGAGATGGAAGAAGGGGTCAAGGAATCATTATGTGG...CCAATGGTCATTGTAAATCATTATCATCTTTATCACAGGGGCTTCCTGAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | GAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGGGCTTCATGTTCATGATGTTTTaGAAGAAGAGTGCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELIGALVNIHSMKSLSGFMFMMF*KKSAWL Trigger: CAGCCAAGCACTCTTCTTCAAAAACATCATGAACAT...GAAGCCCGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS-3UTR CAA 90 bp | GTCATTGAACTGATTGGTGCATTAGTAAACATTCATAGTATGAAGTCTCTCTCGTTTGCATTAGAACAGTaGTTTTTATCTGTCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VIELIGALVNIHSMKSLSFALEQ*FLSVSL Trigger: GAGCGAGACAGATAAAAACAACTGTTCTAATGCAAA...CGAGAGAGACTTCATACTATGAATGTTTACTAATGCACCAATCAGTTCAATGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS GCA 72 bp | GATGATGGTGGTGGGGGCCTCCACCAGAACCCCCAGTaGCTTCGACAGCAGCCGTGGCAGCTGCGACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DDGGGGLHQNPQ*LRQQPWQLRQQ Trigger: CTGCTGTCGCAGCTGCCACGGCTGCTGTCGAAGGCACTGGGGGTTCTGGTGGAGGCCCCCACCACCATCATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS CAA 72 bp | TCGCTGACGCCTCCTCCTTCTACTTCCACGGCTACCTaGAGGATCATGGGAGGAGTAGGCCCCACGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTPPPSTSTAT*RIMGGVGPTCL Trigger: CAGACACGTGGGGCCTACTCCTCCCATGATCCTCAAGGTAGCCGTGGAAGTAGAAGGAGGAGGCGTCAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS CAA 90 bp | CTTCTCAGTTCGCTGACGCCTCCTCCTTCTACTTCCACGGCTACCTaGAGGATCATGGGAGGAGTAGGCCCCACGTGTCTGATGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLSSLTPPPSTSTAT*RIMGGVGPTCLMMV Trigger: CACCATCATCAGACACGTGGGGCCTACTCCTCCCATGATCCTCAAGGTAGCCGTGGAAGTAGAAGGAGGAGGCGTCAGCGAACTGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS GCA 72 bp | TGGCCTGGGCTGCATAACCATAAGGCATATGGCTGTTaGACCCTGAGCTCTCGGCACTCACCATCGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: WPGLHNHKAYGC*TLSSRHSPSPL Trigger: AAGTGGCGATGGTGAGTGCCGAGAGCTCAGGGTGCAACAGCCATATGCCTTATGGTTATGCAGCCCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS GCA 72 bp | TGCCGAGGTGTCATTCAGCAATCTGCTGTGCCCGCCTaGACTGAGGGCCATAATAAGGTCCCTATCATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRGVIQQSAVPA*TEGHNKVPIIP Trigger: AGGGATGATAGGGACCTTATTATGGCCCTCAGTGCAGGCGGGCACAGCAGATTGCTGAATGACACCTCGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS CCA 72 bp | GGGTCATTGAATATTGTGTGCCCTGAGTTCTCCAGGTaGGGTGCCGAGGTGTCATTCAGCAATCTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSLNIVCPEFSR*GAEVSFSNLLC Trigger: GCACAGCAGATTGCTGAATGACACCTCGGCACCCCACCTGGAGAACTCAGGGCACACAATATTCAATGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS TCA 72 bp | TTCTCTTCAGAGCCACTGGGCATCAGGTCTGAGCAATaGGGAAAACTGCTCTGCCTGTGGTGGAGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSEPLGIRSEQ*GKLLCLWWSFF Trigger: GAAGAAACTCCACCACAGGCAGAGCAGTTTTCCTCATTGCTCAGACCTGATGCCCAGTGGCTCTGAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS GCA 72 bp | AGCCACTGGGCATCAGGTCTGAGCAATGAGGAAAACTaGTCTGCCTGTGGTGGAGTTTCTTCTTCTCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SHWASGLSNEEN*SACGGVSSSQF Trigger: GAACTGAGAAGAAGAAACTCCACCACAGGCAGAGCAGTTTTCCTCATTGCTCAGACCTGATGCCCAGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS CAA 72 bp | TCCTTGACCCCTTCTTCCATCTCTAGATACTCTGACTaGTCCCCCAGGGAAGAAGAAGTGGAGCTCCGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SLTPSSISRYSD*SPREEEVELRN Trigger: ATTTCGGAGCTCCACTTCTTCTTCCCTGGGGGACAAGTCAGAGTATCTAGAGATGGAAGAAGGGGTCAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS CAA 90 bp | CATAATGATTCCTTGACCCCTTCTTCCATCTCTAGATACTCTGACTaGTCCCCCAGGGAAGAAGAAGTGGAGCTCCGAAATTTCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HNDSLTPSSISRYSD*SPREEEVELRNFLS Trigger: GCTCAAGAAATTTCGGAGCTCCACTTCTTCTTCCCTGGGGGACAAGTCAGAGTATCTAGAGATGGAAGAAGGGGTCAAGGAATCATTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS CAA 90 bp | TCTGACTTGTCCCCCAGGGAAGAAGAAGTGGAGCTCCGAAATTTCTaGAGCAAATTAGAAGGTAGGTATGGACAACTGACTGCGTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SDLSPREEEVELRNF*SKLEGRYGQLTAFC Trigger: ACAAAACGCAGTCAGTTGTCCATACCTACCTTCTAATTTGCTCAAGAAATTTCGGAGCTCCACTTCTTCTTCCCTGGGGGACAAGTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
||
| CDS CAA 72 bp | TCCCCCAGGGAAGAAGAAGTGGAGCTCCGAAATTTCTaGAGCAAATTAGAAGGTAGGTATGGACAACTGACT | + |
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Preference number: 6 (lower is better) Translates to: SPREEEVELRNF*SKLEGRYGQLT Trigger: AGTCAGTTGTCCATACCTACCTTCTAATTTGCTCAAGAAATTTCGGAGCTCCACTTCTTCTTCCCTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037012.3 |
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