Pregenerated sensors for KCNA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047959Ensembl transcript IDs: ENSMUST00000052718.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCGCCTCCCGCCGCCTCTaGCTCCAGCAGGTGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: RPRGHVPHNTGHRIGNRIASRRL*LQQVVP Trigger: GGGGACCACCTGCTGGAGCCAGAGGCGGCGGGAGGC...GATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | CAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATGGCGGGCAGCGCGGGTaGCAGTGGCTCGTAGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: QTKGACSTQYWAQNWQPYGGQRG*QWLVAV Trigger: GACCGCTACGAGCCACTGCCACCCGCGCTGCCCGCC...ATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | ACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATCACCGCCGCCGCCACTaGCACAGCCTCCCTGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: TKGACSTQYWAQNWQPYHHRRRH*HSLPEA Trigger: CGCCTCAGGGAGGCTGTGGCAGTGGCGGCGGCGGTG...ATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | CCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATCGCCGCAGCAATCTTaGTCGCCCGCGGCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRGHVPHNTGHRIGNRIISPQQS*SPAAGS Trigger: GCTGCCCGCCGCGGGCGAGCAAGATTGCTGCGGCGA...TATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | GACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCACTGACACAATGGCAATaGCCCGGGCCGGCCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DQGGMFHTILGTELATVSLTQWQ*PGPARS Trigger: GCTCCGGGCCGGCCCGGGGCATTGCCATTGTGTCAG...TGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | AGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCTCTGGCTCCAGCAGGTaGTCCCCGGGCACCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPRGHVPHNTGHRIGNRISGSSR*SPGTTV Trigger: GACCGTGGTGCCCGGGGACCACCTGCTGGAGCCAGA...GATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR TCA 90 bp | CAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATTGTCGATGGGCACGTTaGCCGGCCGGCGAATGCGGC | + |
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Preference number: 4 (lower is better) Translates to: QGGMFHTILGTELATVSYCRWAR*PAGECG Trigger: GCCGCATTCGCCGGCCGGTCAACGTGCCCATCGACA...ATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR TCA 90 bp | ACAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATGGAGTTGCCCGTTTTaGAGGGGGTCTGCGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDQGGMFHTILGTELATVWSCPF*RGSAGR Trigger: CCTTCCCGCAGACCCCCTTCAAAACGGGCAACTCCA...TACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | CCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATAGGTCAAAGTACCGCATaGGCCGCTTGGGGTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRGHVPHNTGHRIGNRIIGQSTA*AAWGRP Trigger: TGGGCGACCCCAAGCGGCGCATGCGGTACTTTGACC...TATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | CAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATACCGCATGCGCCGCTTaGGGTCGCCCAGCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGMFHTILGTELATVSYTACAA*GRPAVS Trigger: AGACACTGCTGGGCGACCCCAAGCGGCGCATGCGGT...ATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | CCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATAGCCCCAGCTCCCGCATaGAAGCCTTCAGCGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGHVPHNTGHRIGNRIIAPAPA*KPSASV Trigger: GACAGACGCTGAAGGCTTCCATGCGGGAGCTGGGGC...TATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | CAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATAGTGTCTCGGGGAACTaGCAGAGGGTCTTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTKGACSTQYWAQNWQPYSVSGN*QRVLSC Trigger: GCAGCTCAAGACCCTCTGCCAGTTCCCCGAGACACT...ATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | AAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATACCAGCACTGACACAATaGCAATGCCCCGGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KGACSTQYWAQNWQPYHIPALTQ*QCPGPA Trigger: GGCCGGCCCGGGGCATTGCCATTGTGTCAGTGCTGG...TATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | AGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCGAAGAGGAGAGGTGCTaGCAACTGCCCACGTGCATG | + |
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Preference number: 4 (lower is better) Translates to: RPRGHVPHNTGHRIGNRIEEERC*QLPTCM Trigger: CATGCACGTGGGCAGTTGCCAGCACCTCTCCTCTTC...GATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | CCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATAGCCAGCGACATGGCCTaGTGCCCATTACCTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PRGHVPHNTGHRIGNRIIASDMA*CPLPCR Trigger: ACGACAAGGTAATGGGCAGCAGGCCATGTCGCTGGC...TATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | CCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATAAGAGGTGCTGGCAACTaGCCACGTGCATGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGHVPHNTGHRIGNRIIRGAGN*PRACTG Trigger: CCCAGTACATGCACGTGGGCAGTTGCCAGCACCTCT...TATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | ACAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTACACGGAACTTTTCCATaGCCTCCTCACCCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDQGGMFHTILGTELATVHGTFP*PPHPAG Trigger: ACCAGCTGGGTGAGGAGGCCATGGAAAAGTTCCGTG...TACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | AGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCGTACTCATTGCGGAGTaGGTCAAAGTACCGCATGCG | + |
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Preference number: 4 (lower is better) Translates to: RPRGHVPHNTGHRIGNRIVLIAE*VKVPHA Trigger: CGCATGCGGTACTTTGACCCACTCCGCAATGAGTAC...GATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | ACAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATGTTCGTGGTGCAAGTaGCTGTGGAGTTGCCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: TDQGGMFHTILGTELATVCSWCK*LWSCPF Trigger: AAACGGGCAACTCCACAGCCACTTGCACCACGAACA...TACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | ACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATGAGAGCCCACAATCTTaGCTCCTATGGTCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKGACSTQYWAQNWQPYHESPQS*LLWSLG Trigger: ACCCAGTGACCATAGGAGGCAAGATTGTGGGCTCTC...ATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | CAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCACAGGAACTGGCAATaGAATGGTCAAGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTKGACSTQYWAQNWQPYHRNWQ*NGQDTC Trigger: GCAGGTGTCTTGACCATTGCATTGCCAGTTCCTGTG...ATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | ACAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTAGGTTATTGTTCGTGGTaGAAGTGGCTGTGGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: TDQGGMFHTILGTELATVGYCSW*KWLWSC Trigger: GCAACTCCACAGCCACTTGCACCACGAACAATAACC...TACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | CAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATGCCTCCTATGGTCACTaGGTGCATATCACCATAACC | + |
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Preference number: 4 (lower is better) Translates to: QTKGACSTQYWAQNWQPYASYGH*VHITIT Trigger: GGTTATGGTGATATGCACCCAGTGACCATAGGAGGC...ATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | ACAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCAAGACACCTGCGATaGCACAAAGAGAGCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: TDQGGMFHTILGTELATVSRHLR*HKESPQ Trigger: TTGTGGGCTCTCTTTGTGCCATCGCAGGTGTCTTGA...TACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | ACAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTAGAACTGGCAATGCAATaGTCAAGACACCTGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: TDQGGMFHTILGTELATVELAMQ*SRHLRW Trigger: CCATCGCAGGTGTCTTGACCATTGCATTGCCAGTTC...TACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | ACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATAATGGTCAAGACACCTaGGATGGCACAAAGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: TKGACSTQYWAQNWQPYHNGQDT*DGTKRA Trigger: GGCTCTCTTTGTGCCATCGCAGGTGTCTTGACCATT...ATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR GCA 90 bp | AAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATAAGCGACATGGCCTGCTaGCCATTACCTTGTCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: KGACSTQYWAQNWQPYHISDMAC*PLPCRS Trigger: TGAACGACAAGGTAATGGGCAGCAGGCCATGTCGCT...TATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | AAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATACCGACTTACTCAGAGTaGAGTTACTCCGGGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KGACSTQYWAQNWQPYHIPTYSE*SYSGLF Trigger: GAAAAGCCCGGAGTAACTCCACTCTGAGTAAGTCGG...TATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | AAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATATGGGGTTATTGTTCGTaGTGCAAGTGGCTGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: KGACSTQYWAQNWQPYHIWGYCS*CKWLWS Trigger: ACTCCACAGCCACTTGCACCACGAACAATAACCCCA...TATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR TCA 90 bp | GACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATGTCTATCAAGTTCATaGTATTTCTGGAGAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DQGGMFHTILGTELATVSCLSSS*YFWRRW Trigger: CCACCTTCTCCAGAAATATCATGAACTTGATAGACA...TGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | CAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATTATTTCTGGAGAAGGTaGCTTTACTGGGGCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: QGGMFHTILGTELATVSYYFWRR*LYWGKQ Trigger: TTGCTTGCCCCAGTAAAGCCACCTTCTCCAGAAATA...ATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CCA 90 bp | AAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATAAACAATCACAGGAACTaGCAATGCAATGGTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: KGACSTQYWAQNWQPYHINNHRN*QCNGQD Trigger: GTCTTGACCATTGCATTGCCAGTTCCTGTGATTGTT...TATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS GCA 90 bp | GAGTTACTCCGGGCTTTTCGGAGCTCCTCGGCTGAAGAGGAGAGGTaGTGGCAACTGCCCACGTGCATGTACTGGGCTTGCTCTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: ELLRAFRSSSAEEER*WQLPTCMYWACSSP Trigger: AGGGGAAGAGCAAGCCCAGTACATGCACGTGGGCAGTTGCCAGCACCTCTCCTCTTCAGCCGAGGAGCTCCGAAAAGCCCGGAGTAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS CCA 90 bp | TTACTCCGGGCTTTTCGGAGCTCCTCGGCTGAAGAGGAGAGGTGCTaGCAACTGCCCACGTGCATGTACTGGGCTTGCTCTTCCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LLRAFRSSSAEEERC*QLPTCMYWACSSPS Trigger: AGAAGGGGAAGAGCAAGCCCAGTACATGCACGTGGGCAGTTGCCAGCACCTCTCCTCTTCAGCCGAGGAGCTCCGAAAAGCCCGGAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | AGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCTACCGCATGCGCCGCTaGGGGTCGCCCAGCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RPRGHVPHNTGHRIGNRIYRMRR*GSPSSV Trigger: GACACTGCTGGGCGACCCCAAGCGGCGCATGCGGTA...GATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | ACAGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTACGCAGCCCAGAGATGTaGATGACCACACGCTCGCCG | + |
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Preference number: 5 (lower is better) Translates to: TDQGGMFHTILGTELATVRSPEM*MTTRSP Trigger: CGGCGAGCGTGTGGTCATCAACATCTCTGGGCTGCG...TACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | AAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATAATGTCGATGGGCACGTaGACCGGCCGGCGAATGCGG | + |
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Preference number: 5 (lower is better) Translates to: KGACSTQYWAQNWQPYHIMSMGT*TGRRMR Trigger: CCGCATTCGCCGGCCGGTCAACGTGCCCATCGACAT...TATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | CAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATCCCGACGTGCTGTTGTaGGCAGCCTCAAACACGTCC | + |
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Preference number: 5 (lower is better) Translates to: QGGMFHTILGTELATVSYPDVLL*AASNTS Trigger: GGACGTGTTTGAGGCTGCCAACAACAGCACGTCGGG...ATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | CCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATAAGAGAGCCCACAATCTaGCCTCCTATGGTCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: PRGHVPHNTGHRIGNRIIREPTI*PPMVTG Trigger: CCCAGTGACCATAGGAGGCAAGATTGTGGGCTCTCT...TATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | CAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATCAAGTGGCTGTGGAGTaGCCCGTTTTGAAGGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: QGGMFHTILGTELATVSYQVAVE*PVLKGV Trigger: GACCCCCTTCAAAACGGGCAACTCCACAGCCACTTG...ATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | CAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATCAGGAGTTGGGGTTATaGTTCGTGGTGCAAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: QGGMFHTILGTELATVSYQELGL*FVVQVA Trigger: AGCCACTTGCACCACGAACAATAACCCCAACTCCTG...ATATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | AGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATGTTGACACAGGAGTaGGGGTTATTGTTCGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RPRGHVPHNTGHRIGNRIMLTQE*GLLFVV Trigger: CACCACGAACAATAACCCCAACTCCTGTGTCAACAT...GATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | AGACCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCAATATCTTCTTGATGTaGACACAGGAGTTGGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: RPRGHVPHNTGHRIGNRINIFLM*TQELGL Trigger: TAACCCCAACTCCTGTGTCAACATCAAGAAGATATT...GATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS-3UTR CAA 90 bp | CCAAGGGGGCATGTTCCACACAATACTGGGCACAGAATTGGCAACCGTATCATATCAGTGAATATCTTCTaGATGTTGACACAGGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: PRGHVPHNTGHRIGNRIISVNIF*MLTQEL Trigger: CAACTCCTGTGTCAACATCAAGAAGATATTCACTGA...TATGATACGGTTGCCAATTCTGTGCCCAGTATTGTGTGGAACATGCCCCCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS CCA 72 bp | GCAGCAATCTTGCTCGCCCGCGGCGGGCAGCGCGGGTaGCAGTGGCTCGTAGCGGTCGCAGCCGCCACCGCC | + |
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Preference number: 6 (lower is better) Translates to: AAILLARGGQRG*QWLVAVAAATA Trigger: GGCGGTGGCGGCTGCGACCGCTACGAGCCACTGCCACCCGCGCTGCCCGCCGCGGGCGAGCAAGATTGCTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS GCA 72 bp | CCGAGAAGCTGGAGGCTCCAGAAGGGGCCCCCGACGTaGTGTTGTTGGCAGCCTCAAACACGTCCTGCGACG | + |
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Preference number: 6 (lower is better) Translates to: PRSWRLQKGPPT*CCWQPQTRPAT Trigger: CGTCGCAGGACGTGTTTGAGGCTGCCAACAACAGCACGTCGGGGGCCCCTTCTGGAGCCTCCAGCTTCTCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS GCA 72 bp | TCGGCTGAAGAGGAGAGGTGCTGGCAACTGCCCACGTaGATGTACTGGGCTTGCTCTTCCCCTTCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SAEEERCWQLPT*MYWACSSPSVS Trigger: GGAGACAGAAGGGGAAGAGCAAGCCCAGTACATGCACGTGGGCAGTTGCCAGCACCTCTCCTCTTCAGCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS TCA 72 bp | TGTTCGTGGTGCAAGTGGCTGTGGAGTTGCCCGTTTTaGAGGGGGTCTGCGGGAAGGCGCTGTGGTTCATAC | + |
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Preference number: 6 (lower is better) Translates to: CSWCKWLWSCPF*RGSAGRRCGSY Trigger: GTATGAACCACAGCGCCTTCCCGCAGACCCCCTTCAAAACGGGCAACTCCACAGCCACTTGCACCACGAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS CAA 72 bp | TTGTTCGTGGTGCAAGTGGCTGTGGAGTTGCCCGTTTaGAAGGGGGTCTGCGGGAAGGCGCTGTGGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LFVVQVAVELPV*KGVCGKALWFI Trigger: TATGAACCACAGCGCCTTCCCGCAGACCCCCTTCAAAACGGGCAACTCCACAGCCACTTGCACCACGAACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS CAA 90 bp | ACATCAGTGAATATCTTCTTGATGTTGACACAGGAGTTGGGGTTATaGTTCGTGGTGCAAGTGGCTGTGGAGTTGCCCGTTTTGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TSVNIFLMLTQELGL*FVVQVAVELPVLKG Trigger: CCCCTTCAAAACGGGCAACTCCACAGCCACTTGCACCACGAACAATAACCCCAACTCCTGTGTCAACATCAAGAAGATATTCACTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS CAA 72 bp | AATATCTTCTTGATGTTGACACAGGAGTTGGGGTTATaGTTCGTGGTGCAAGTGGCTGTGGAGTTGCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: NIFLMLTQELGL*FVVQVAVELPV Trigger: AACGGGCAACTCCACAGCCACTTGCACCACGAACAATAACCCCAACTCCTGTGTCAACATCAAGAAGATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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| CDS CAA 72 bp | ACATCAGTGAATATCTTCTTGATGTTGACACAGGAGTaGGGGTTATTGTTCGTGGTGCAAGTGGCTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: TSVNIFLMLTQE*GLLFVVQVAVE Trigger: CTCCACAGCCACTTGCACCACGAACAATAACCCCAACTCCTGTGTCAACATCAAGAAGATATTCACTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052718.5 |
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