Pregenerated sensors for KCNA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040724Ensembl transcript IDs: ENSMUST00000038695.6, ENSMUST00000196403.2, ENSMUST00000197470.5
Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CACCTCCCACAAAGGAGAAGAAGAGAAGCACAGAGGCTTTGTGCCTaGCATGGGATGCCCTGCAGTCACCTGGGGATATGGGTGACCAGG | + |
Preference number: 1 (lower is better) Translates to: HLPQRRRREAQRLCA*HGMPCSHLGIWVTR Trigger: CCTGGTCACCCATATCCCCAGGTGACTGCAGGGCATCCCATGCCAGGCACAAAGCCTCTGTGCTTCTCTTCTTCTCCTTTGTGGGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | CCAGGAAGAGGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTaGAGCTCAATCATGGGCCTTTCCAGCTTCCCGGAGCCCTTCAAA | + |
Preference number: 1 (lower is better) Translates to: PGRGQFGWGIVCSAG*SSIMGLSSFPEPFK Trigger: TTTGAAGGGCTCCGGGAAGCTGGAAAGGCCCATGATTGAGCTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | ATCCAAGCACGACAACAAAAGGAAACTGGGTCGCCGGCTCCCACGTaGAGGCAGAACTGGGGCAAGCACGGAGCATGTTCAAACTCTCAG | + |
Preference number: 1 (lower is better) Translates to: IQARQQKETGSPAPT*RQNWGKHGACSNSQ Trigger: CTGAGAGTTTGAACATGCTCCGTGCTTGCCCCAGTTCTGCCTTCACGTGGGAGCCGGCGACCCAGTTTCCTTTTGTTGTCGTGCTTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | AGAGGGGTGCATGACTGCAGAAACCCAGGAAGAGGCCAATTTGGCTaGGGCATTGTTTGCTCAGCAGGCTGGAGCTCAATCATGGGCCTT | + |
Preference number: 1 (lower is better) Translates to: RGVHDCRNPGRGQFG*GIVCSAGWSSIMGL Trigger: AAGGCCCATGATTGAGCTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTTCTGCAGTCATGCACCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | GCTTTCTGGCACCATTCGTCCTGGCTGTTCCAAGATTACCCTCAGTaGAGAGAGGGGTGCATGACTGCAGAAACCCAGGAAGAGGCCAAT | + |
Preference number: 1 (lower is better) Translates to: AFWHHSSWLFQDYPQ*REGCMTAETQEEAN Trigger: ATTGGCCTCTTCCTGGGTTTCTGCAGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGGAACAGCCAGGACGAATGGTGCCAGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | TCAGACCCTACTGACACAGGAACTCTCAGCTGCAGAAGTCCTGGGTaGGGCAGTGTTGGTGGGGCTGAAAGCTTCCAGAATATGTCAGCA | + |
Preference number: 1 (lower is better) Translates to: SDPTDTGTLSCRSPG*GSVGGAESFQNMSA Trigger: TGCTGACATATTCTGGAAGCTTTCAGCCCCACCAACACTGCCCCACCCAGGACTTCTGCAGCTGAGAGTTCCTGTGTCAGTAGGGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | CTGAGGAGTGTGCAAGGGATCCCTTACCTCTCCTTCCCTGCTTTCTaGTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
Preference number: 1 (lower is better) Translates to: LRSVQGIPYLSFPAF*SLCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACAGAGAGAGCAGAAAGCAGGGAAGGAGAGGTAAGGGATCCCTTGCACACTCCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | GGAGCTGAGGCTCACCCTTGCCAAAGCCATCCAGGCCTCTCCTCTTaGTTTTCTATTCCAGGTCTTAGCCTTGAACTCGTGTGCTCCTTT | + |
Preference number: 1 (lower is better) Translates to: GAEAHPCQSHPGLSS*FSIPGLSLELVCSF Trigger: AAAGGAGCACACGAGTTCAAGGCTAAGACCTGGAATAGAAAAGCAAGAGGAGAGGCCTGGATGGCTTTGGCAAGGGTGAGCCTCAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | ATAATAATGGAGATGATTAATGGGATGGATTCTAGGGAGGAGGCCTaGGTGGGCCTGGCCCAGGATAGCTGGAGCTGTGAGGGCTATAGG | + |
Preference number: 1 (lower is better) Translates to: IIMEMINGMDSREEA*VGLAQDSWSCEGYR Trigger: CCTATAGCCCTCACAGCTCCAGCTATCCTGGGCCAGGCCCACCCAGGCCTCCTCCCTAGAATCCATCCCATTAATCATCTCCATTATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR TCA 90 bp | CAGCCTATTGTGAATGAGAGTCAGAGGGCGATTCCCAACTCTGCCTaGGTAACTGATCCCATCCGTACACCCCATGGCTACATTCCTTGG | + |
Preference number: 1 (lower is better) Translates to: QPIVNESQRAIPNSA*VTDPIRTPHGYIPW Trigger: CCAAGGAATGTAGCCATGGGGTGTACGGATGGGATCAGTTACTCAGGCAGAGTTGGGAATCGCCCTCTGACTCTCATTCACAATAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | TGGAGCTCAATCATGGGCCTTTCCAGCTTCCCGGAGCCCTTCAAATaGAGAAACCATCCAAGCACGACAACAAAAGGAAACTGGGTCGCC | + |
Preference number: 1 (lower is better) Translates to: WSSIMGLSSFPEPFK*RNHPSTTTKGNWVA Trigger: GGCGACCCAGTTTCCTTTTGTTGTCGTGCTTGGATGGTTTCTTCATTTGAAGGGCTCCGGGAAGCTGGAAAGGCCCATGATTGAGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | TCCGTCAGGAGAATGATGCAAGGGCTTCTCAGCGGCACACTCAGCTaGAACATATCTGACTATTTTAGGAGTGAGGAGGAGCACGGGAAG | + |
Preference number: 1 (lower is better) Translates to: SVRRMMQGLLSGTLS*NISDYFRSEEEHGK Trigger: CTTCCCGTGCTCCTCCTCACTCCTAAAATAGTCAGATATGTTCCAGCTGAGTGTGCCGCTGAGAAGCCCTTGCATCATTCTCCTGACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | AATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTGGAGCTCAATCATaGGCCTTTCCAGCTTCCCGGAGCCCTTCAAATGAAGAAACCATC | + |
Preference number: 1 (lower is better) Translates to: NLAGALFAQQAGAQS*AFPASRSPSNEETI Trigger: GATGGTTTCTTCATTTGAAGGGCTCCGGGAAGCTGGAAAGGCCCATGATTGAGCTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | CATCCTGTAGTGGGAGGTGGGGCTTATTTCACTAATGATATCCCTTaGCGACCCATGCCTCTGTGCCTGTTCACCTCTACCCAAAGCTCT | + |
Preference number: 1 (lower is better) Translates to: HPVVGGGAYFTNDIP*RPMPLCLFTSTQSS Trigger: AGAGCTTTGGGTAGAGGTGAACAGGCACAGAGGCATGGGTCGTCAAGGGATATCATTAGTGAAATAAGCCCCACCTCCCACTACAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | ATCTATGTACATATATCAGACCCTACTGACACAGGAACTCTCAGCTaGAGAAGTCCTGGGTGGGGCAGTGTTGGTGGGGCTGAAAGCTTC | + |
Preference number: 1 (lower is better) Translates to: IYVHISDPTDTGTLS*RSPGWGSVGGAESF Trigger: GAAGCTTTCAGCCCCACCAACACTGCCCCACCCAGGACTTCTGCAGCTGAGAGTTCCTGTGTCAGTAGGGTCTGATATATGTACATAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | CATGCAGTTCTATTGCATGACTGGTATACTCCACTGCAGTGTCAGTaGAGCTGGGCCACACCACCAGGAAAGCAGATGTCTTGCAAACTC | + |
Preference number: 1 (lower is better) Translates to: HAVLLHDWYTPLQCQ*SWATPPGKQMSCKL Trigger: GAGTTTGCAAGACATCTGCTTTCCTGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGGAGTATACCAGTCATGCAATAGAACTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CCA 90 bp | CTGCTCCGCCTTCAGCTCTCATTGGTTCTCTGTCTCTTATCACCATaGAGACCCACGTTCCCTTTCAGCATCATCCTTAGGAAGCTTTGC | + |
Preference number: 1 (lower is better) Translates to: LLRLQLSLVLCLLSP*RPTFPFSIILRKLC Trigger: GCAAAGCTTCCTAAGGATGATGCTGAAAGGGAACGTGGGTCTCCATGGTGATAAGAGACAGAGAACCAATGAGAGCTGAAGGCGGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | CCAGACACTTGGAGAGGAGTTCGGGTCCTCAGTGTAGATTTTCTTTaGAAGAAAAGGGATAGCAAGGGAGCCCACAAGAGGTTGCCAGCT | + |
Preference number: 1 (lower is better) Translates to: PDTWRGVRVLSVDFL*KKRDSKGAHKRLPA Trigger: AGCTGGCAACCTCTTGTGGGCTCCCTTGCTATCCCTTTTCTTTCAAAGAAAATCTACACTGAGGACCCGAACTCCTCTCCAAGTGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | GTGGAGCAAAGTAGATTGAGAAGGAATGGAATGGGCTCCTGGGGTTaGCAGCCTTTCCTGTCCAGTCTGAATGTTAATAGCTCACCTCAC | + |
Preference number: 1 (lower is better) Translates to: VEQSRLRRNGMGSWG*QPFLSSLNVNSSPH Trigger: GTGAGGTGAGCTATTAACATTCAGACTGGACAGGAAAGGCTGGCAACCCCAGGAGCCCATTCCATTCCTTCTCAATCTACTTTGCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTaGTATACTCCACTGCAGTGTCAGTGGAGCTGGGCCACACCACCA | + |
Preference number: 1 (lower is better) Translates to: IEIHAVNTHAVLLHD*YTPLQCQWSWATPP Trigger: TGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGGAGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CCA 90 bp | AATGGAAACAAGAGAATCCTCCTTGCTTTCTGGCACCATTCGTCCTaGCTGTTCCAAGATTACCCTCAGTGGAGAGAGGGGTGCATGACT | + |
Preference number: 1 (lower is better) Translates to: NGNKRILLAFWHHSS*LFQDYPQWREGCMT Trigger: AGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGGAACAGCCAGGACGAATGGTGCCAGAAAGCAAGGAGGATTCTCTTGTTTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | CCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTTaGGATTTTCCAACGTTAGGCTATGCAAAGGTGTGTGGAGCAAAG | + |
Preference number: 1 (lower is better) Translates to: PQITRIAKHPGHPPP*DFPTLGYAKVCGAK Trigger: CTTTGCTCCACACACCTTTGCATAGCCTAACGTTGGAAAATCTCAAGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | ACAGTATTATGTAATCACACCTGCCCTATGCATCCGTCAGGAGAATaGTGCAAGGGCTTCTCAGCGGCACACTCAGCTGGAACATATCTG | + |
Preference number: 1 (lower is better) Translates to: TVLCNHTCPMHPSGE*CKGFSAAHSAGTYL Trigger: CAGATATGTTCCAGCTGAGTGTGCCGCTGAGAAGCCCTTGCATCATTCTCCTGACGGATGCATAGGGCAGGTGTGATTACATAATACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | AATGTCAAAAGAAAGCCTTCTTGTGGGCCTTCCTTGAGTGCACACTaGACCTCTGTGTATATGTTCATTCCAGAGGGAGGTCGGACCTCA | + |
Preference number: 1 (lower is better) Translates to: NVKRKPSCGPSLSAH*TSVYMFIPEGGRTS Trigger: TGAGGTCCGACCTCCCTCTGGAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | AGGTGTGTGGAGCAAAGTAGATTGAGAAGGAATGGAATGGGCTCCTaGGGTTGCCAGCCTTTCCTGTCCAGTCTGAATGTTAATAGCTCA | + |
Preference number: 1 (lower is better) Translates to: RCVEQSRLRRNGMGS*GCQPFLSSLNVNSS Trigger: TGAGCTATTAACATTCAGACTGGACAGGAAAGGCTGGCAACCCCAGGAGCCCATTCCATTCCTTCTCAATCTACTTTGCTCCACACACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | AACCCAGAGGTTCCAGTGCTCGATATGGTGCCACATCTTTCCACTTaGAACCTCAGGAGTTATGTCTCAGGAATGAGGTTGGATGCCAAA | + |
Preference number: 1 (lower is better) Translates to: NPEVPVLDMVPHLST*NLRSYVSGMRLDAK Trigger: TTTGGCATCCAACCTCATTCCTGAGACATAACTCCTGAGGTTTCAAGTGGAAAGATGTGGCACCATATCGAGCACTGGAACCTCTGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | CATTCCAGAGGGAGGTCGGACCTCAGCAGACAGGAATCATTCATATaGCCATGTAGGAAGAAGAAGTACAGAAACCGTGAACAGATGTCC | + |
Preference number: 1 (lower is better) Translates to: HSRGRSDLSRQESFI*PCRKKKYRNREQMS Trigger: GGACATCTGTTCACGGTTTCTGTACTTCTTCTTCCTACATGGTCATATGAATGATTCCTGTCTGCTGAGGTCCGACCTCCCTCTGGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | AAGACAGAATGTCAAAAGAAAGCCTTCTTGTGGGCCTTCCTTGAGTaGACACTGCACCTCTGTGTATATGTTCATTCCAGAGGGAGGTCG | + |
Preference number: 1 (lower is better) Translates to: KTECQKKAFLWAFLE*TLHLCVYVHSRGRS Trigger: CGACCTCCCTCTGGAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTTGACATTCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | TGTGAGAATTTAAGCCACTGTGTTAAAAGGCAAAGACACCCAGTATaGGGAAGCAAAGGCCTTCCCCACTCTCTTCCTAGGGACAACACA | + |
Preference number: 1 (lower is better) Translates to: CENLSHCVKRQRHPV*GSKGLPHSLPRDNT Trigger: TGTGTTGTCCCTAGGAAGAGAGTGGGGAAGGCCTTTGCTTCCCCATACTGGGTGTCTTTGCCTTTTAACACAGTGGCTTAAATTCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | TTCCAGGTCTTAGCCTTGAACTCGTGTGCTCCTTTTAGCCTCACTTaGCAGGTCAGAGTCTCTACACTTTGTAAGTCCAGAACTCAGTCA | + |
Preference number: 1 (lower is better) Translates to: FQVLALNSCAPFSLT*QVRVSTLCKSRTQS Trigger: TGACTGAGTTCTGGACTTACAAAGTGTAGAGACTCTGACCTGCCAAGTGAGGCTAAAAGGAGCACACGAGTTCAAGGCTAAGACCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | CTTAACCTTCTACTATCCCAAGTTTGTCCCTTCCACCCCATGTCATaGAATTCAGCACCACCTCCCACAAAGGAGAAGAAGAGAAGCACA | + |
Preference number: 1 (lower is better) Translates to: LNLLLSQVCPFHPMS*NSAPPPTKEKKRST Trigger: TGTGCTTCTCTTCTTCTCCTTTGTGGGAGGTGGTGCTGAATTTCATGACATGGGGTGGAAGGGACAAACTTGGGATAGTAGAAGGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | TTTTCCGTTACGAAACATAAGCCTCCGGAGCATCTAGTTGGCAACTaGAATTCACAAACCCCAGCCTGTGACACAGAAAGTAGTTCCAAC | + |
Preference number: 1 (lower is better) Translates to: FSVTKHKPPEHLVGN*NSQTPACDTESSSN Trigger: GTTGGAACTACTTTCTGTGTCACAGGCTGGGGTTTGTGAATTGCAGTTGCCAACTAGATGCTCCGGAGGCTTATGTTTCGTAACGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR GCA 90 bp | TCATGCATGAACAGCAAAGAAGCCGGTGAAATCCTAATTAGTCTGTaGTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTAT | + |
Preference number: 1 (lower is better) Translates to: SCMNSKEAGEILISL*CMSLSERPFPQCVY Trigger: ATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCACAGACTAATTAGGATTTCACCGGCTTCTTTGCTGTTCATGCATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | GAAAAGTGTTTCCCCATGACTTTAACACTGCTAGGCAAGACAGAATaGAGGGCATATTTAGGATCCCACCCAGCAGTCTACAGCTCATCT | + |
Preference number: 1 (lower is better) Translates to: EKCFPMTLTLLGKTE*RAYLGSHPAVYSSS Trigger: AGATGAGCTGTAGACTGCTGGGTGGGATCCTAAATATGCCCTCCATTCTGTCTTGCCTAGCAGTGTTAAAGTCATGGGGAAACACTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | TCCAGATCTACTTTAGCTAGCATCATTCAGCCTGTCCTTTTTGTCTaGTTCACCTCTGTTTCCAGGCACCAAGCACTGAGATTTAGAAGG | + |
Preference number: 1 (lower is better) Translates to: SRSTLASIIQPVLFV*FTSVSRHQALRFRR Trigger: CCTTCTAAATCTCAGTGCTTGGTGCCTGGAAACAGAGGTGAAGCAGACAAAAAGGACAGGCTGAATGATGCTAGCTAAAGTAGATCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | TGCATGAACAGCAAAGAAGCCGGTGAAATCCTAATTAGTCTGTGCTaGATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTATAAA | + |
Preference number: 1 (lower is better) Translates to: CMNSKEAGEILISLC*MSLSERPFPQCVYK Trigger: TTTATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCACAGACTAATTAGGATTTCACCGGCTTCTTTGCTGTTCATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | CCATGGAGACCCACGTTCCCTTTCAGCATCATCCTTAGGAAGCTTTaGTATAAGCCTTGGAGTTCCTTTTTCCCTATTGATCTCAAAGAG | + |
Preference number: 1 (lower is better) Translates to: PWRPTFPFSIILRKL*YKPWSSFFPIDLKE Trigger: CTCTTTGAGATCAATAGGGAAAAAGGAACTCCAAGGCTTATAGCAAAGCTTCCTAAGGATGATGCTGAAAGGGAACGTGGGTCTCCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | AACCTGATTCAGGGTTCAGAATCCTATAGTTTCTTGGACCATCACTaGTTCAAGACAATAGGGAGAAATCTGGAGATCCCAGACACTTGG | + |
Preference number: 1 (lower is better) Translates to: NLIQGSESYSFLDHH*FKTIGRNLEIPDTW Trigger: CCAAGTGTCTGGGATCTCCAGATTTCTCCCTATTGTCTTGAAGCAGTGATGGTCCAAGAAACTATAGGATTCTGAACCCTGAATCAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | GTTGGATGCCAAAGAAGAGGCTCCTTGGAGAATATTGAGGGATATTaGTATGGGCAAGGAAAAGCAATTAAATCTGATCCCTTGCCTTCA | + |
Preference number: 1 (lower is better) Translates to: VGCQRRGSLENIEGY*YGQGKAIKSDPLPS Trigger: TGAAGGCAAGGGATCAGATTTAATTGCTTTTCCTTGCCCATATCAATATCCCTCAATATTCTCCAAGGAGCCTCTTCTTTGGCATCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | TTCTTATCTATTGGTAAGCACTCTCCTACAGACTTCCATTACACCTaGCAGACAGACACAAATTCAACAAGACAGGCTGGCATAAGGTCA | + |
Preference number: 1 (lower is better) Translates to: FLSIGKHSPTDFHYT*QTDTNSTRQAGIRS Trigger: TGACCTTATGCCAGCCTGTCTTGTTGAATTTGTGTCTGTCTGTCAGGTGTAATGGAAGTCTGTAGGAGAGTGCTTACCAATAGATAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 90 bp | CCACAGAGGCCTCATGAAGCTATGGTGGAAATTGATATCTTGCTTTaGAAACTCAAGTCTCAGTGTGTTAAGTGTACAAGTTTTGAACCA | + |
Preference number: 1 (lower is better) Translates to: PQRPHEAMVEIDILL*KLKSQCVKCTSFEP Trigger: TGGTTCAAAACTTGTACACTTAACACACTGAGACTTGAGTTTCCAAAGCAAGATATCAATTTCCACCATAGCTTCATGAGGCCTCTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | AATGAATCAAGAGTTGTCGTCATTGGACTCATGCCTAAGAGTAAGTaGAATGCCACGAGCAAGGAAAGCATTTTAAGAGCTAAGTCTATA | + |
Preference number: 1 (lower is better) Translates to: NESRVVVIGLMPKSK*NATSKESILRAKSI Trigger: TATAGACTTAGCTCTTAAAATGCTTTCCTTGCTCGTGGCATTTCACTTACTCTTAGGCATGAGTCCAATGACGACAACTCTTGATTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR TCA 90 bp | AGCAAGGAAAGCATTTTAAGAGCTAAGTCTATAGATCCAACTTTCTaGCCTGGATCCAGACAACACTACTTTGGAAAGAGTGTTAATAAG | + |
Preference number: 1 (lower is better) Translates to: SKESILRAKSIDPTF*PGSRQHYFGKSVNK Trigger: CTTATTAACACTCTTTCCAAAGTAGTGTTGTCTGGATCCAGGTCAGAAAGTTGGATCTATAGACTTAGCTCTTAAAATGCTTTCCTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 90 bp | AGGGATATTGATATGGGCAAGGAAAAGCAATTAAATCTGATCCCTTaGCTTCATTTATCAATTTTTAGATGTGGAAGCAGAGGCAGTCAA | + |
Preference number: 1 (lower is better) Translates to: RDIDMGKEKQLNLIP*LHLSIFRCGSRGSQ Trigger: TTGACTGCCTCTGCTTCCACATCTAAAAATTGATAAATGAAGGCAAGGGATCAGATTTAATTGCTTTTCCTTGCCCATATCAATATCCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | CCTGGAGTACCCTACACATCAGAACCCTCACAGGCCTTAGCCATCCCATTCCCCGTGGGGTGGAGGGAATaGACCTCCCAGGTGTGCTCA | + |
Preference number: 2 (lower is better) Translates to: PGVPYTSEPSQALAIPFPVGWRE*TSQVCS Trigger: TGAGCACACCTGGGAGGTGCATTCCCTCCACCCCAC...GGGGAATGGGATGGCTAAGGCCTGTGAGGGTTCTGATGTGTAGGGTACTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | AAACCCAGGAAGAGGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTGGAGGTGGTAGGGGTGGGGTaGAGGGAATGCACCTCCCAG | + |
Preference number: 2 (lower is better) Translates to: KPRKRPIWLGHCLLSRLEVVGVG*RECTSQ Trigger: CTGGGAGGTGCATTCCCTCCACCCCACCCCTACCAC...CTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | GGAGGCCTCTCCCAAGGACCCAGAGACACAGCATATAGTCCTCTGGGTAACTACCCACTGCAGTGTCAGTaGAGCTGGGCCACACCACCA | + |
Preference number: 2 (lower is better) Translates to: GGLSQGPRDTAYSPLGNYPLQCQ*SWATPP Trigger: TGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGG...GTAGTTACCCAGAGGACTATATGCTGTGTCTCTGGGTCCTTGGGAGAGGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | TGTGATTTAGTTCTACCAAAGGCCACAAAGCCCATCCCCGCCCCACCTCCCTTTGTGAAAGACCAGAGGTaGGCTGAGAGGGCCAGCCAG | + |
Preference number: 2 (lower is better) Translates to: CDLVLPKATKPIPAPPPFVKDQR*AERASQ Trigger: CTGGCTGGCCCTCTCAGCCCACCTCTGGTCTTTCAC...AAAGGGAGGTGGGGCGGGGATGGGCTTTGTGGCCTTTGGTAGAACTAAATCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | TATACTCCACTGCAGTGTCAGTGGAGCTGGGCCACACCACCAGGAAAGCAGATGGAGGGGGCTGCATTGTaGCTTTCTGAGATGCTGGCT | + |
Preference number: 2 (lower is better) Translates to: YTPLQCQWSWATPPGKQMEGAAL*LSEMLA Trigger: AGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTC...CATCTGCTTTCCTGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGGAGTATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | CCAAGATTACCCTCAGTGGAGAGAGGGGTGCATGACTGCAGAAACCCAGGAAGAGGCTGGGGCATTGTTTaGTCAGCAGGCTGGAGCTCA | + |
Preference number: 2 (lower is better) Translates to: PRLPSVERGVHDCRNPGRGWGIV*SAGWSS Trigger: TGAGCTCCAGCCTGCTGAGCAAACAATGCCCCAGCC...TCTTCCTGGGTTTCTGCAGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | TGTGATTTAGTTCTACCAAAGGCCACAAAGCCCATCCCCGCCCCACCTCCCTTTCAGTGTCAGTGGAGCTaGGCCACACCACCAGGAAAG | + |
Preference number: 2 (lower is better) Translates to: CDLVLPKATKPIPAPPPFQCQWS*ATPPGK Trigger: CTTTCCTGGTGGTGTGGCCCAGCTCCACTGACACTG...AAAGGGAGGTGGGGCGGGGATGGGCTTTGTGGCCTTTGGTAGAACTAAATCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTTCAGCCGTGGGAAACTaGAGCTGCAGCACATGGAGG | + |
Preference number: 2 (lower is better) Translates to: PISPQITRIAKHPGHPPPSAVGN*SCSTWR Trigger: CCTCCATGTGCTGCAGCTTCAGTTTCCCACGGCTGA...AGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | GCTTTGTGCCTGGCATGGGATGCCCTGCAGTCACCTGGGGATATGGGTGACCAGGGTGACCCTGAAGCTTaGAAAATGGTATCTGAAGCT | + |
Preference number: 2 (lower is better) Translates to: ALCLAWDALQSPGDMGDQGDPEA*KMVSEA Trigger: AGCTTCAGATACCATTTTGCAAGCTTCAGGGTCACC...CTGGTCACCCATATCCCCAGGTGACTGCAGGGCATCCCATGCCAGGCACAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | AAACCCAGGAAGAGGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTGGAGGAGGTTGCCAGCTCTTaGAGTTCCCACAGCTTTCAC | + |
Preference number: 2 (lower is better) Translates to: KPRKRPIWLGHCLLSRLEEVASS*SSHSFH Trigger: GTGAAAGCTGTGGGAACTGCAAGAGCTGGCAACCTC...CTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | AAAAGAAAGCCTTCTTGTGGGCCTTCCTTGAGTGCACACTGCACCTCTGTGTATAGACCAGAGGTGGGCTaGGAGGGCCAGCCAGAAGTT | + |
Preference number: 2 (lower is better) Translates to: KRKPSCGPSLSAHCTSVYRPEVG*EGQPEV Trigger: AACTTCTGGCTGGCCCTCTCAGCCCACCTCTGGTCT...ATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | AAAAGAAAGCCTTCTTGTGGGCCTTCCTTGAGTGCACACTGCACCTCTGTGTATCTTGAATGGGAAGCCTaGGTTCCCTGGGAGCCTGGG | + |
Preference number: 2 (lower is better) Translates to: KRKPSCGPSLSAHCTSVYLEWEA*VPWEPG Trigger: CCCAGGCTCCCAGGGAACTCAGGCTTCCCATTCAAG...ATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | AGGAGAATGATGCAAGGGCTTCTCAGCGGCACACTCAGCTGGAACATATCTGACGGAATGTGGGGGAAATaGCAGCCACCCCTGTATCAC | + |
Preference number: 2 (lower is better) Translates to: RRMMQGLLSGTLSWNISDGMWGK*QPPLYH Trigger: GTGATACAGGGGTGGCTGTCATTTCCCCCACATTCC...GTCAGATATGTTCCAGCTGAGTGTGCCGCTGAGAAGCCCTTGCATCATTCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | CAGGATAGCTGGAGCTGTGAGGGCTATAGGACCCTTGTGCACTCAGTAAGACAATTGAACCCACAGACCTaGCTGTCTTCAGGACCCTGG | + |
Preference number: 2 (lower is better) Translates to: QDSWSCEGYRTLVHSVRQLNPQT*LSSGPW Trigger: CCAGGGTCCTGAAGACAGGCAGGTCTGTGGGTTCAA...TTGTCTTACTGAGTGCACAAGGGTCCTATAGCCCTCACAGCTCCAGCTATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | CCAAGATTACCCTCAGTGGAGAGAGGGGTGCATGACTGCAGAAACCCAGGAAGATGGGCCTTCCTTGAGTaGACACTGCACCTCTGTGTA | + |
Preference number: 2 (lower is better) Translates to: PRLPSVERGVHDCRNPGRWAFLE*TLHLCV Trigger: TACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCA...TCTTCCTGGGTTTCTGCAGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | CCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTAATGGAATGGGCTCCTaGGGTTGCCAGCCTTTCCTG | + |
Preference number: 2 (lower is better) Translates to: PISPQITRIAKHPGHPPPNGMGS*GCQPFL Trigger: CAGGAAAGGCTGGCAACCCCAGGAGCCCATTCCATT...AGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | AGGAGAATGATGCAAGGGCTTCTCAGCGGCACACTCAGCTGGAACATATCTGACCAAACCCAGGCCCAGTaGGTTTACTGTACCCATTGG | + |
Preference number: 2 (lower is better) Translates to: RRMMQGLLSGTLSWNISDQTQAQ*VYCTHW Trigger: CCAATGGGTACAGTAAACCCACTGGGCCTGGGTTTG...GTCAGATATGTTCCAGCTGAGTGTGCCGCTGAGAAGCCCTTGCATCATTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | TGTGATTTAGTTCTACCAAAGGCCACAAAGCCCATCCCCGCCCCACCTCCCTTTGCAGAACTGGGGAGGTaGAAAGAATGCAAAGAAGGT | + |
Preference number: 2 (lower is better) Translates to: CDLVLPKATKPIPAPPPFAELGR*KECKEG Trigger: ACCTTCTTTGCATTCTTTTCACCTCCCCAGTTCTGC...AAAGGGAGGTGGGGCGGGGATGGGCTTTGTGGCCTTTGGTAGAACTAAATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | CATTTTCAAGGAGAAGCAGGGCCTGGAGGCCTCTCCCAAGGACCCAGAGACACAGGTATGCACATTGCATaGTTATGCGGCATATACATG | + |
Preference number: 2 (lower is better) Translates to: HFQGEAGPGGLSQGPRDTGMHIA*LCGIYM Trigger: CATGTATATGCCGCATAAGCATGCAATGTGCATACC...TGTGTCTCTGGGTCCTTGGGAGAGGCCTCCAGGCCCTGCTTCTCCTTGAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGATGGGCTCCTGGGGTTaGCAGCCTTTCCTGTCCAGT | + |
Preference number: 2 (lower is better) Translates to: LLLFFLCIPECLCSLTNKMGSWG*QPFLSS Trigger: ACTGGACAGGAAAGGCTGGCAACCCCAGGAGCCCAT...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | AAACCCAGGAAGAGGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTGGAGCTCCTTTTCTTTCTCTaGATCCCCGAGTGTTTATGC | + |
Preference number: 2 (lower is better) Translates to: KPRKRPIWLGHCLLSRLELLFFL*IPECLC Trigger: GCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAG...CTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGCTGCATCAGTCCTGTTaGGCTGTGAGTACATTAGTA | + |
Preference number: 2 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLLHQSC*AVSTLV Trigger: TACTAATGTACTCACAGCTCAACAGGACTGATGCAG...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR-3UTR TCA 90 bp | GAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTCCAAAGGGGCAGATGGGCTaGAATAGGGTGGTAGGGGTG | + |
Preference number: 2 (lower is better) Translates to: EIHAVNTHAVLLHDWYTPKGQMG*NRVVGV Trigger: CACCCCTACCACCCTATTTCAGCCCATCTGCCCCTT...TGGAGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR TCA 90 bp | AACCACACATTTTCCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGGCATGTCTGAGGCAATaGCAGCAAACCCAGGCCCAG | + |
Preference number: 2 (lower is better) Translates to: NHTFSHFSSNNQDRKASRACLRQ*QQTQAQ Trigger: CTGGGCCTGGGTTTGCTGTCATTGCCTCAGACATGC...CCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGGAAAATGTGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | TGTGATTTAGTTCTACCAAAGGCCACAAAGCCCATCCCCGCCCCACCTCCCTTTATTCCCTTTGATCCTTaGGGCAGGAAGGGAAAAGAA | + |
Preference number: 2 (lower is better) Translates to: CDLVLPKATKPIPAPPPFIPFDP*GRKGKE Trigger: TTCTTTTCCCTTCCTGCCTCAAGGATCAAAGGGAAT...AAAGGGAGGTGGGGCGGGGATGGGCTTTGTGGCCTTTGGTAGAACTAAATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATCTATTATGCAACATCTaGATCAGTCCTGTTGAGCTG | + |
Preference number: 2 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHLLCNI*ISPVEL Trigger: CAGCTCAACAGGACTGATGCAGATGTTGCATAATAG...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | TATACTCCACTGCAGTGTCAGTGGAGCTGGGCCACACCACCAGGAAAGCAGATGCTATTATGCAACATCTaGATCAGTCCTGTTGAGCTG | + |
Preference number: 2 (lower is better) Translates to: YTPLQCQWSWATPPGKQMLLCNI*ISPVEL Trigger: CAGCTCAACAGGACTGATGCAGATGTTGCATAATAG...CATCTGCTTTCCTGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGGAGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGTTGAACCCACAGACCTaGCTGTCTTCAGGACCCTGG | + |
Preference number: 2 (lower is better) Translates to: LLLFFLCIPECLCSLTNKLNPQT*LSSGPW Trigger: CCAGGGTCCTGAAGACAGGCAGGTCTGTGGGTTCAA...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | CCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTCCATTATCTGCTCATTaGCTCCTCTATAGAGGCCTG | + |
Preference number: 2 (lower is better) Translates to: PISPQITRIAKHPGHPPPPLSAH*LLYRGL Trigger: CAGGCCTCTATAGAGGAGGCAATGAGCAGATAATGG...AGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 90 bp | TTTACTTCAGCTAAACTGGTCTGCGATTTTGTCAAGGCACAACACTaGAATGGGAAGCCTGAGTTCCCTGGGAGCCTGGGTTGGGAAGTA | + |
Preference number: 2 (lower is better) Translates to: FTSAKLVCDFVKAQH*NGKPEFPGSLGWEV Trigger: TACTTCCCAACCCAGGCTCCCAGGGAACTCAGGCTTCCCATTCAAGTGTTGTGCCTTGACAAAATCGCAGACCAGTTTAGCTGAAGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | AAGAGGAAGCTAAATAGACCAGTGCTGAGCCAAGTCTCTGAGTGTCCCACTCCCCTGCATCAGTCCTGTTaGGCTGTGAGTACATTAGTA | + |
Preference number: 2 (lower is better) Translates to: KRKLNRPVLSQVSECPTPLHQSC*AVSTLV Trigger: TACTAATGTACTCACAGCTCAACAGGACTGATGCAG...GGGAGTGGGACACTCAGAGACTTGGCTCAGCACTGGTCTATTTAGCTTCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGTGCATTGTGCCTTTCTaGGATGCTGGCTCCATGGGT | + |
Preference number: 2 (lower is better) Translates to: LLLFFLCIPECLCSLTNKCIVPF*DAGSMG Trigger: ACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCA...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CATTTTCAAGGAGAAGCAGGGCCTGGAGGCCTCTCCCAAGGACCCAGAGACACAAGTTCATTGTGTTTGTaGGAATTTAAGCCACTGTGT | + |
Preference number: 2 (lower is better) Translates to: HFQGEAGPGGLSQGPRDTSSLCL*EFKPLC Trigger: ACACAGTGGCTTAAATTCTCACAAACACAATGAACT...TGTGTCTCTGGGTCCTTGGGAGAGGCCTCCAGGCCCTGCTTCTCCTTGAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTGTTATGTCTCAGGAATaGGGTTGGATGCCAAAGAAG | + |
Preference number: 2 (lower is better) Translates to: PISPQITRIAKHPGHPPPVMSQE*GWMPKK Trigger: CTTCTTTGGCATCCAACCTCATTCCTGAGACATAAC...AGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGGATCTCGATTCCCTTTaGTCCTTGAGGCAGGAAGGG | + |
Preference number: 2 (lower is better) Translates to: LLLFFLCIPECLCSLTNKDLDSL*SLRQEG Trigger: CCCTTCCTGCCTCAAGGATCAAAGGGAATCGAGATC...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGCAATGCAGGCTATTATaGAACATCTGCATCAGTCCT | + |
Preference number: 2 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLQCRLL*NICISP Trigger: AGGACTGATGCAGATGTTGCATAATAGCCTGCATTG...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATAACTATTGCTTTCCATaGAGAACCAGATGCTGTAGA | + |
Preference number: 2 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHNYCFP*RTRCCR Trigger: TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTT...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTGTGGGGTGGAGGGAATaGACCTCCCAGGTGTGCTCA | + |
Preference number: 2 (lower is better) Translates to: IEIHAVNTHAVLLHDWYTVGWRE*TSQVCS Trigger: TGAGCACACCTGGGAGGTGCATTCCCTCCACCCCAC...AGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | AAACCCAGGAAGAGGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTGGAGTGTTGGTATGCACATTaGATGCTTATGCGGCATATA | + |
Preference number: 2 (lower is better) Translates to: KPRKRPIWLGHCLLSRLECWYAH*MLMRHI Trigger: TATATGCCGCATAAGCATGCAATGTGCATACCAACA...CTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | CATTTTCAAGGAGAAGCAGGGCCTGGAGGCCTCTCCCAAGGACCCAGAGACACATATTCTATGTTGGTATaGACATTGCATGCTTATGCG | + |
Preference number: 2 (lower is better) Translates to: HFQGEAGPGGLSQGPRDTYSMLV*TLHAYA Trigger: CGCATAAGCATGCAATGTGCATACCAACATAGAATA...TGTGTCTCTGGGTCCTTGGGAGAGGCCTCCAGGCCCTGCTTCTCCTTGAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | CAGTATGCTAGGGAGAGAGAGTCTGAGTTTAGTAATCAAAATGATGCTTTGGGTGTGAAAGACCAGAGGTaGGCTGAGAGGGCCAGCCAG | + |
Preference number: 2 (lower is better) Translates to: QYARERESEFSNQNDALGVKDQR*AERASQ Trigger: CTGGCTGGCCCTCTCAGCCCACCTCTGGTCTTTCAC...ACCCAAAGCATCATTTTGATTACTAAACTCAGACTCTCTCTCCCTAGCATACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CAA 90 bp | AAACCCAGAGGTTCCAGTGCTCGATATGGTGCCACATCTTTCCACTaGAAACCTCAGGAGTTATGTCTCAGGAATGAGGTTGGATGCCAA | + |
Preference number: 2 (lower is better) Translates to: KPRGSSARYGATSFH*KPQELCLRNEVGCQ Trigger: TTGGCATCCAACCTCATTCCTGAGACATAACTCCTGAGGTTTCAAGTGGAAAGATGTGGCACCATATCGAGCACTGGAACCTCTGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 90 bp | TCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTaGAGATTTTCCAACGTTAGGCTATGCAAAGGTGTGTGGAGCAAA | + |
Preference number: 2 (lower is better) Translates to: SSNNQDRKASRTPSS*RFSNVRLCKGVWSK Trigger: TTTGCTCCACACACCTTTGCATAGCCTAACGTTGGAAAATCTCAAGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAACTATTGCTTTCCATaGAGAACCAGATGCTGTAGA | + |
Preference number: 2 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLNYCFP*RTRCCR Trigger: TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTT...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATAGATCAAAAGTCACTTaGACGAACTATTGCTTTCCA | + |
Preference number: 2 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHRSKVT*TNYCFP Trigger: TGGAAAGCAATAGTTCGTGCAAGTGACTTTTGATCT...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | TGGCTCAGGATGCTTTATTCTTATCTATTGGTAAGCACTCTCCTACAGACTTCCGAGGGGGCTGCATTGTaGCTTTCTGAGATGCTGGCT | + |
Preference number: 2 (lower is better) Translates to: WLRMLYSYLLVSTLLQTSEGAAL*LSEMLA Trigger: AGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTC...GGAAGTCTGTAGGAGAGTGCTTACCAATAGATAAGAATAAAGCATCCTGAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | GGAGGCCTCTCCCAAGGACCCAGAGACACAGCATATAGTCCTCTGGGTAACTACAGAGAAAAAGCAGAATaGAGCATTTTTCCGTTACGA | + |
Preference number: 2 (lower is better) Translates to: GGLSQGPRDTAYSPLGNYREKAE*SIFPLR Trigger: TCGTAACGGAAAAATGCTGCATTCTGCTTTTTCTCT...GTAGTTACCCAGAGGACTATATGCTGTGTCTCTGGGTCCTTGGGAGAGGCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | AAAAGAAAGCCTTCTTGTGGGCCTTCCTTGAGTGCACACTGCACCTCTGTGTATAGGAATGAGGTTGGATaGCAAAGAAGAGGCTCCTTG | + |
Preference number: 2 (lower is better) Translates to: KRKPSCGPSLSAHCTSVYRNEVG*QRRGSL Trigger: CAAGGAGCCTCTTCTTTGGCATCCAACCTCATTCCT...ATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | GAAATCCTAATTAGTCTGTGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGATCACACCTGCCCTATaGATCCGTCAGGAGAATGAT | + |
Preference number: 2 (lower is better) Translates to: EILISLCCMSLSERPFPQITPAL*IRQEND Trigger: ATCATTCTCCTGACGGATGCATAGGGCAGGTGTGAT...CTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCACAGACTAATTAGGATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | TGTGATTTAGTTCTACCAAAGGCCACAAAGCCCATCCCCGCCCCACCTCCCTTTCTGAAGCTTGCAAAATaGTATCTGAAGCTGAGAAGT | + |
Preference number: 2 (lower is better) Translates to: CDLVLPKATKPIPAPPPFLKLAK*YLKLRS Trigger: ACTTCTCAGCTTCAGATACCATTTTGCAAGCTTCAG...AAAGGGAGGTGGGGCGGGGATGGGCTTTGTGGCCTTTGGTAGAACTAAATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CCA 90 bp | CAGTATGCTAGGGAGAGAGAGTCTGAGTTTAGTAATCAAAATGATGCTTTGGGTCAGTGTCAGTGGAGCTaGGCCACACCACCAGGAAAG | + |
Preference number: 2 (lower is better) Translates to: QYARERESEFSNQNDALGQCQWS*ATPPGK Trigger: CTTTCCTGGTGGTGTGGCCCAGCTCCACTGACACTG...ACCCAAAGCATCATTTTGATTACTAAACTCAGACTCTCTCTCCCTAGCATACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR CCA 90 bp | AAGAGGAAGCTAAATAGACCAGTGCTGAGCCAAGTCTCTGAGTGTCCCACTCCCGTTCTATTGCATGACTaGTATACTCCACTGCAGTGT | + |
Preference number: 2 (lower is better) Translates to: KRKLNRPVLSQVSECPTPVLLHD*YTPLQC Trigger: ACACTGCAGTGGAGTATACCAGTCATGCAATAGAAC...GGGAGTGGGACACTCAGAGACTTGGCTCAGCACTGGTCTATTTAGCTTCCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | AGGAGAATGATGCAAGGGCTTCTCAGCGGCACACTCAGCTGGAACATATCTGACAACACTGTAGAACACTaGCTACAATGCAGGCTATTA | + |
Preference number: 2 (lower is better) Translates to: RRMMQGLLSGTLSWNISDNTVEH*LQCRLL Trigger: TAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTT...GTCAGATATGTTCCAGCTGAGTGTGCCGCTGAGAAGCCCTTGCATCATTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CCAAGATTACCCTCAGTGGAGAGAGGGGTGCATGACTGCAGAAACCCAGGAAGATATTTGTTCTTGGGGTaGGGATTAATTCTTTACCCA | + |
Preference number: 2 (lower is better) Translates to: PRLPSVERGVHDCRNPGRYLFLG*GLILYP Trigger: TGGGTAAAGAATTAATCCTCACCCCAAGAACAAATA...TCTTCCTGGGTTTCTGCAGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGATTGAATTCCCTGCCTaGGGATCTTCAGAAGCTCTG | + |
Preference number: 2 (lower is better) Translates to: LLLFFLCIPECLCSLTNKIEFPA*GSSEAL Trigger: CAGAGCTTCTGAAGATCCTCAGGCAGGGAATTCAAT...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR GCA 90 bp | CCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTTTATTTTGGCTGGTGTaGATTTTGCATGTGTGCTGT | + |
Preference number: 2 (lower is better) Translates to: PISPQITRIAKHPGHPPPLFWLV*ILHVCC Trigger: ACAGCACACATGCAAAATGCACACCAGCCAAAATAA...AGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | GAAATCCTAATTAGTCTGTGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTCCGGAGCATCTAGTTaGCAACTGCAATTCACAAAC | + |
Preference number: 2 (lower is better) Translates to: EILISLCCMSLSERPFPQSGASS*QLQFTN Trigger: GTTTGTGAATTGCAGTTGCCAACTAGATGCTCCGGA...CTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCACAGACTAATTAGGATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | TTCCTTGAGTGCACACTGCACCTCTGTGTATATGTTCATTCCAGAGGGAGGTCGTTTCTCTACTTTTCCTaGACTCTTTCCTGTCCAACC | + |
Preference number: 2 (lower is better) Translates to: FLECTLHLCVYVHSRGRSFLYFS*TLSCPT Trigger: GGTTGGACAGGAAAGAGTCCAGGAAAAGTAGAGAAA...CGACCTCCCTCTGGAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CCA 90 bp | CCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTCCCATAGTTTTTCTCTaGGGAAGATGTGTTTCTAAC | + |
Preference number: 2 (lower is better) Translates to: PISPQITRIAKHPGHPPPPIVFL*GRCVSN Trigger: GTTAGAAACACATCTTCCCCAGAGAAAAACTATGGG...AGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | TTCCTTGAGTGCACACTGCACCTCTGTGTATATGTTCATTCCAGAGGGAGGTCGCAGGAATCATTCATATaGCCATGTAGGAAGAAGAAG | + |
Preference number: 2 (lower is better) Translates to: FLECTLHLCVYVHSRGRSQESFI*PCRKKK Trigger: CTTCTTCTTCCTACATGGTCATATGAATGATTCCTG...CGACCTCCCTCTGGAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | AACCACACATTTTCCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGCATCTAGTTGGCAACTaGAATTCACAAACCCCAGCC | + |
Preference number: 2 (lower is better) Translates to: NHTFSHFSSNNQDRKASRHLVGN*NSQTPA Trigger: GGCTGGGGTTTGTGAATTGCAGTTGCCAACTAGATG...CCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGGAAAATGTGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR GCA 90 bp | AAGAGGAAGCTAAATAGACCAGTGCTGAGCCAAGTCTCTGAGTGTCCCACTCCCTATGCGGCATATACATaGTTTGTCTATCTTTTCTGC | + |
Preference number: 2 (lower is better) Translates to: KRKLNRPVLSQVSECPTPYAAYT*FVYLFC Trigger: GCAGAAAAGATAGACAAAGCATGTATATGCCGCATA...GGGAGTGGGACACTCAGAGACTTGGCTCAGCACTGGTCTATTTAGCTTCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | CCAAGATTACCCTCAGTGGAGAGAGGGGTGCATGACTGCAGAAACCCAGGAAGATCATATTATTTTGGCTaGTGTGCATTTTGCATGTGT | + |
Preference number: 2 (lower is better) Translates to: PRLPSVERGVHDCRNPGRSYYFG*CAFCMC Trigger: ACACATGCAAAATGCACACCAGCCAAAATAATATGA...TCTTCCTGGGTTTCTGCAGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | AAGCCTTGGAGTTCCTTTTTCCCTATTGATCTCAAAGAGGCTTATGGATCTTCCACTGCACTCCCCTCATaGCCTCCACATGTTGTTTGT | + |
Preference number: 2 (lower is better) Translates to: KPWSSFFPIDLKEAYGSSTALPS*PPHVVC Trigger: ACAAACAACATGTGGAGGCCATGAGGGGAGTGCAGT...GGAAGATCCATAAGCCTCTTTGAGATCAATAGGGAAAAAGGAACTCCAAGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 90 bp | TCGGGGCATTTCAACCTGATTCAGGGTTCAGAATCCTATAGTTTCTaGGACCATCACTGCTTCAAGACAATAGGGAGAAATCTGGAGATC | + |
Preference number: 2 (lower is better) Translates to: SGHFNLIQGSESYSF*DHHCFKTIGRNLEI Trigger: GATCTCCAGATTTCTCCCTATTGTCTTGAAGCAGTGATGGTCCAAGAAACTATAGGATTCTGAACCCTGAATCAGGTTGAAATGCCCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGCTGCATCAGTCCTGTTaGGCTGTGAGTACATTAGTA | + |
Preference number: 2 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLLHQSC*AVSTLV Trigger: TACTAATGTACTCACAGCTCAACAGGACTGATGCAG...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR-3UTR TCA 90 bp | AACCACACATTTTCCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACTCTAACACACCACTaGAGTTCTAGAAAGGCACAG | + |
Preference number: 2 (lower is better) Translates to: NHTFSHFSSNNQDRKASRTLTHH*SSRKAQ Trigger: CTGTGCCTTTCTAGAACTTCAGTGGTGTGTTAGAGT...CCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGGAAAATGTGTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGCTATTATGCAACATCTaGATCAGTCCTGTTGAGCTG | + |
Preference number: 2 (lower is better) Translates to: LLLFFLCIPECLCSLTNKLLCNI*ISPVEL Trigger: CAGCTCAACAGGACTGATGCAGATGTTGCATAATAG...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | GAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTCCAGGTGACCCTGAAGCTTaGAAAATGGTATCTGAAGCT | + |
Preference number: 2 (lower is better) Translates to: EIHAVNTHAVLLHDWYTPGDPEA*KMVSEA Trigger: AGCTTCAGATACCATTTTGCAAGCTTCAGGGTCACC...TGGAGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | CCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTTGGAAATTGATATCTTaGTTTGGAAACTCAAGTCTC | + |
Preference number: 2 (lower is better) Translates to: PISPQITRIAKHPGHPPPWKLIS*FGNSSL Trigger: GAGACTTGAGTTTCCAAAGCAAGATATCAATTTCCA...AGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | TGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTATAAATATAAAGGAATCCATGAACACTaGAGCATGTCTGAGGCAATG | + |
Preference number: 2 (lower is better) Translates to: CCMSLSERPFPQCVYKYKGIHEH*SMSEAM Trigger: CATTGCCTCAGACATGCTCCAGTGTTCATGGATTCC...TTTATATTTATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGCATGGCTACATTCCTTaGTATTCATTTCCCTGGAGA | + |
Preference number: 2 (lower is better) Translates to: LLLFFLCIPECLCSLTNKHGYIP*YSFPWR Trigger: TCTCCAGGGAAATGAATACCAAGGAATGTAGCCATG...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | CTGGTAAGCTGTGTAGTCATGCCCACGACTAGATTAATCCCCAAAGTTCAGTCAAACACTGTAGAACACTaGCTACAATGCAGGCTATTA | + |
Preference number: 2 (lower is better) Translates to: LVSCVVMPTTRLIPKVQSNTVEH*LQCRLL Trigger: TAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTT...TGACTGAACTTTGGGGATTAATCTAGTCGTGGGCATGACTACACAGCTTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | TCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTCAATGCAGGCTATTATaGAACATCTGCATCAGTCCT | + |
Preference number: 2 (lower is better) Translates to: SLARTIAFHAEPDAVEHCQCRLL*NICISP Trigger: AGGACTGATGCAGATGTTGCATAATAGCCTGCATTG...ACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR CAA 90 bp | CTGAGGCCACAGAGGCCTCATGAAGCTATGGTGGAAATTGATATCTaGCTTTGGAAACTCAAGTCTCAGTGTGTTAAGTGTACAAGTTTT | + |
Preference number: 2 (lower is better) Translates to: LRPQRPHEAMVEIDI*LWKLKSQCVKCTSF Trigger: AAAACTTGTACACTTAACACACTGAGACTTGAGTTTCCAAAGCAAGATATCAATTTCCACCATAGCTTCATGAGGCCTCTGTGGCCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR TCA 90 bp | TGGCTCAGGATGCTTTATTCTTATCTATTGGTAAGCACTCTCCTACAGACTTCCTTTCTAGGGTACTGCTaGAGAAAAGGTAGAAAGGCA | + |
Preference number: 2 (lower is better) Translates to: WLRMLYSYLLVSTLLQTSFLGYC*RKGRKA Trigger: TGCCTTTCTACCTTTTCTTCAGCAGTACCCTAGAAA...GGAAGTCTGTAGGAGAGTGCTTACCAATAGATAAGAATAAAGCATCCTGAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGAACACATGCATAAATTaGCCTGTGTCAAGATATTGC | + |
Preference number: 2 (lower is better) Translates to: LLLFFLCIPECLCSLTNKNTCIN*PVSRYC Trigger: GCAATATCTTGACACAGGGCAATTTATGCATGTGTT...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | GAAATCCTAATTAGTCTGTGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTAATGGCTCAGGATaGTTTATTCTTATCTATTGG | + |
Preference number: 2 (lower is better) Translates to: EILISLCCMSLSERPFPQCNGSG*FILIYW Trigger: CCAATAGATAAGAATAAAGCATCCTGAGCCATTACA...CTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCACAGACTAATTAGGATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTTCCGGAGCATCTAGTTaGCAACTGCAATTCACAAAC | + |
Preference number: 2 (lower is better) Translates to: IEIHAVNTHAVLLHDWYTSGASS*QLQFTN Trigger: GTTTGTGAATTGCAGTTGCCAACTAGATGCTCCGGA...AGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CAA 90 bp | CTGAGCTTGTGTGCAGAAACAATAACAAAGCATCACTTATGTAACTaGCATGTATATCCATTGTCCCCGACCCCCAGTTGGATTTGTATA | + |
Preference number: 2 (lower is better) Translates to: LSLCAETITKHHLCN*HVYPLSPTPSWICI Trigger: TATACAAATCCAACTGGGGGTCGGGGACAATGGATATACATGCAAGTTACATAAGTGATGCTTTGTTATTGTTTCTGCACACAAGCTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 90 bp | TCAGGAATGAGGTTGGATGCCAAAGAAGAGGCTCCTTGGAGAATATaGAGGGATATTGATATGGGCAAGGAAAAGCAATTAAATCTGATC | + |
Preference number: 2 (lower is better) Translates to: SGMRLDAKEEAPWRI*RDIDMGKEKQLNLI Trigger: GATCAGATTTAATTGCTTTTCCTTGCCCATATCAATATCCCTCAATATTCTCCAAGGAGCCTCTTCTTTGGCATCCAACCTCATTCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | AAGCCTTGGAGTTCCTTTTTCCCTATTGATCTCAAAGAGGCTTATGGATCTTCCAACTATTGCTTTCCATaGAGAACCAGATGCTGTAGA | + |
Preference number: 2 (lower is better) Translates to: KPWSSFFPIDLKEAYGSSNYCFP*RTRCCR Trigger: TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTT...GGAAGATCCATAAGCCTCTTTGAGATCAATAGGGAAAAAGGAACTCCAAGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR GCA 90 bp | TGGCTCAGGATGCTTTATTCTTATCTATTGGTAAGCACTCTCCTACAGACTTCCGGAAAGCAGATGTCTTaGAAACTCCAGAGTAAAAGA | + |
Preference number: 2 (lower is better) Translates to: WLRMLYSYLLVSTLLQTSGKQMS*KLQSKR Trigger: TCTTTTACTCTGGAGTTTGCAAGACATCTGCTTTCC...GGAAGTCTGTAGGAGAGTGCTTACCAATAGATAAGAATAAAGCATCCTGAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | AAGCCTTGGAGTTCCTTTTTCCCTATTGATCTCAAAGAGGCTTATGGATCTTCCGCAGCTATTCTATGTTaGTATGCACATTGCATGCTT | + |
Preference number: 2 (lower is better) Translates to: KPWSSFFPIDLKEAYGSSAAILC*YAHCML Trigger: AAGCATGCAATGTGCATACCAACATAGAATAGCTGC...GGAAGATCCATAAGCCTCTTTGAGATCAATAGGGAAAAAGGAACTCCAAGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 90 bp | TATGCTAGGGAGAGAGAGTCTGAGTTTAGTAATCAAAATGATGCTTaGGGTCATTTAGGGAATCCATCCCTTGGTTCTGGAATTAGGAAA | + |
Preference number: 2 (lower is better) Translates to: YARERESEFSNQNDA*GHLGNPSLGSGIRK Trigger: TTTCCTAATTCCAGAACCAAGGGATGGATTCCCTAAATGACCCAAAGCATCATTTTGATTACTAAACTCAGACTCTCTCTCCCTAGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | CTGAACAGCCTGACCACAGTTCATTGTGTTTGTGAGAATTTAAGCCACTGTGTTAGATCAAAAGTCACTTaGACGAACTATTGCTTTCCA | + |
Preference number: 2 (lower is better) Translates to: LNSLTTVHCVCENLSHCVRSKVT*TNYCFP Trigger: TGGAAAGCAATAGTTCGTGCAAGTGACTTTTGATCT...AACACAGTGGCTTAAATTCTCACAAACACAATGAACTGTGGTCAGGCTGTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTCTGAAGCTTGCAAAATaGTATCTGAAGCTGAGAAGT | + |
Preference number: 2 (lower is better) Translates to: IEIHAVNTHAVLLHDWYTLKLAK*YLKLRS Trigger: ACTTCTCAGCTTCAGATACCATTTTGCAAGCTTCAG...AGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR GCA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTAGAGAAAAAGCAGAATaGAGCATTTTTCCGTTACGA | + |
Preference number: 2 (lower is better) Translates to: IEIHAVNTHAVLLHDWYTREKAE*SIFPLR Trigger: TCGTAACGGAAAAATGCTGCATTCTGCTTTTTCTCT...AGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR CCA 90 bp | GTTAAGTGTACAAGTTTTGAACCACATGTCCATTATCTGCTCATTGCCTCCTCTTCTAGACCTTATGTATaGTTTGCCTTAACCTTCTAC | + |
Preference number: 2 (lower is better) Translates to: VKCTSFEPHVHYLLIASSSRPYV*FALTFY Trigger: GTAGAAGGTTAAGGCAAACCATACATAAGGTCTAGA...AGAGGAGGCAATGAGCAGATAATGGACATGTGGTTCAAAACTTGTACACTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | GTTAAGTGTACAAGTTTTGAACCACATGTCCATTATCTGCTCATTGCCTCCTCTTGCCTCATATTATTTTaGCTGGTGTGCATTTTGCAT | + |
Preference number: 2 (lower is better) Translates to: VKCTSFEPHVHYLLIASSCLILF*LVCILH Trigger: ATGCAAAATGCACACCAGCCAAAATAATATGAGGCA...AGAGGAGGCAATGAGCAGATAATGGACATGTGGTTCAAAACTTGTACACTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CCA 90 bp | TGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTATAAATATAAAAACTTGATCCAAGACTaGATGCAACTTTTAACTTCT | + |
Preference number: 2 (lower is better) Translates to: CCMSLSERPFPQCVYKYKNLIQD*MQLLTS Trigger: AGAAGTTAAAAGTTGCATCCAGTCTTGGATCAAGTT...TTTATATTTATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 72 bp | GTGGCAGGGTCTGTGTTCCCAGTGAAAGACCAGAGGTaGGCTGAGAGGGCCAGCCAGAAGTTTTGGTTCCCC | + |
Preference number: 3 (lower is better) Translates to: VAGSVFPVKDQR*AERASQKFWFP Trigger: GGGGAACCAAAACTTCTGGCTGGCCCTCTCAGCCCACCTCTGGTCTTTCACTGGGAACACAGACCCTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CCA 72 bp | GAGATGATTAATGGGATGGATTCTAGGGAGGAGGCCTaGGTGGGCCTGGCCCAGGATAGCTGGAGCTGTGAG | + |
Preference number: 3 (lower is better) Translates to: EMINGMDSREEA*VGLAQDSWSCE Trigger: CTCACAGCTCCAGCTATCCTGGGCCAGGCCCACCCAGGCCTCCTCCCTAGAATCCATCCCATTAATCATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CCA 72 bp | GGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTaGAGCTCAATCATGGGCCTTTCCAGCTTCCCGGAG | + |
Preference number: 3 (lower is better) Translates to: GQFGWGIVCSAG*SSIMGLSSFPE Trigger: CTCCGGGAAGCTGGAAAGGCCCATGATTGAGCTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 72 bp | GGGGCATTGTTTGCTCAGCAGGCTGGAGCTCAATCATaGGCCTTTCCAGCTTCCCGGAGCCCTTCAAATGAA | + |
Preference number: 3 (lower is better) Translates to: GALFAQQAGAQS*AFPASRSPSNE Trigger: TTCATTTGAAGGGCTCCGGGAAGCTGGAAAGGCCCATGATTGAGCTCCAGCCTGCTGAGCAAACAATGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | TTCCTTGAGTGCACACTGCACCTCTGTGTATATGTTCATTCCAGAGGGAGGTCGGGAGCCCACAAGAGGTaGCCAGCTCTTGCAGTTCCC | + |
Preference number: 3 (lower is better) Translates to: FLECTLHLCVYVHSRGRSGAHKR*PALAVP Trigger: GGGAACTGCAAGAGCTGGCAACCTCTTGTGGGCTCC...CGACCTCCCTCTGGAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | GAGTCAGAGGGCGATTCCCAACTCTGCCTGAGTAACTaGTCCCATCCGTACACCCCATGGCTACATTCCTTG | + |
Preference number: 3 (lower is better) Translates to: ESEGDSQLCLSN*SHPYTPWLHSL Trigger: CAAGGAATGTAGCCATGGGGTGTACGGATGGGATCAGTTACTCAGGCAGAGTTGGGAATCGCCCTCTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | GTGAATGAGAGTCAGAGGGCGATTCCCAACTCTGCCTaGGTAACTGATCCCATCCGTACACCCCATGGCTAC | + |
Preference number: 3 (lower is better) Translates to: VNESQRAIPNSA*VTDPIRTPHGY Trigger: GTAGCCATGGGGTGTACGGATGGGATCAGTTACTCAGGCAGAGTTGGGAATCGCCCTCTGACTCTCATTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | CCCATGCAGTTCTATTGCATGACTGGTATACTCCACTaGAGTGTCAGTGGAGCTGGGCCACACCACCAGGAA | + |
Preference number: 3 (lower is better) Translates to: PMQFYCMTGILH*SVSGAGPHHQE Trigger: TTCCTGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGGAGTATACCAGTCATGCAATAGAACTGCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
3UTR CCA 72 bp | TTGAGGCAGGAAGGGAAAAGAATCGACCTTTCCCTCTaGCAGGGAAGGGAAAGAGGTGACCCTGAGCCTGTT | + |
Preference number: 3 (lower is better) Translates to: LRQEGKRIDLSL*QGRERGDPEPV Trigger: AACAGGCTCAGGGTCACCTCTTTCCCTTCCCTGCCAGAGGGAAAGGTCGATTCTTTTCCCTTCCTGCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | CACCATTCGTCCTGGCTGTTCCAAGATTACCCTCAGTaGAGAGAGGGGTGCATGACTGCAGAAACCCAGGAA | + |
Preference number: 3 (lower is better) Translates to: HHSSWLFQDYPQ*REGCMTAETQE Trigger: TTCCTGGGTTTCTGCAGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGGAACAGCCAGGACGAATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | GTGGGAGGTGGGGCTTATTTCACTAATGATATCCCTTaGCGACCCATGCCTCTGTGCCTGTTCACCTCTACC | + |
Preference number: 3 (lower is better) Translates to: VGGGAYFTNDIP*RPMPLCLFTST Trigger: GGTAGAGGTGAACAGGCACAGAGGCATGGGTCGTCAAGGGATATCATTAGTGAAATAAGCCCCACCTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | GACCAGATTGTCGAGCTTCTGGGAATGTGGGGGAAATaGCAGCCACCCCTGTATCACCTCAACTGCTTCAGA | + |
Preference number: 3 (lower is better) Translates to: DQIVELLGMWGK*QPPLYHLNCFR Trigger: TCTGAAGCAGTTGAGGTGATACAGGGGTGGCTGTCATTTCCCCCACATTCCCAGAAGCTCGACAATCTGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | GTGCAAGGGATCCCTTACCTCTCCTTCCCTGCTTTCTaGTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
Preference number: 3 (lower is better) Translates to: VQGIPYLSFPAF*SLCVCVCVCVC Trigger: ACACACACACACACACACACACACACAGAGAGAGCAGAAAGCAGGGAAGGAGAGGTAAGGGATCCCTTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATaGAGTCTGACAAACAAGGCAGCCGCGTCTAGGGAG | + |
Preference number: 3 (lower is better) Translates to: LLLFFLCIPECL*SLTNKAAASRE Trigger: CTCCCTAGACGCGGCTGCCTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | AAGAGAATCCTCCTTGCTTTCTGGCACCATTCGTCCTaGCTGTTCCAAGATTACCCTCAGTGGAGAGAGGGG | + |
Preference number: 3 (lower is better) Translates to: KRILLAFWHHSS*LFQDYPQWREG Trigger: CCCCTCTCTCCACTGAGGGTAATCTTGGAACAGCCAGGACGAATGGTGCCAGAAAGCAAGGAGGATTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | GGAGGCCTCTCCCAAGGACCCAGAGACACAGCATATAGTCCTCTGGGTAACTACCACTTGCACGAACTATaGCTTTCCATGCAGAACCAG | + |
Preference number: 3 (lower is better) Translates to: GGLSQGPRDTAYSPLGNYHLHEL*LSMQNQ Trigger: CTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTG...GTAGTTACCCAGAGGACTATATGCTGTGTCTCTGGGTCCTTGGGAGAGGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | CATTTTCAAGGAGAAGCAGGGCCTGGAGGCCTCTCCCAAGGACCCAGAGACACAGCCACATCTTTCCACTaGAAACCTCAGGAGTTATGT | + |
Preference number: 3 (lower is better) Translates to: HFQGEAGPGGLSQGPRDTATSFH*KPQELC Trigger: ACATAACTCCTGAGGTTTCAAGTGGAAAGATGTGGC...TGTGTCTCTGGGTCCTTGGGAGAGGCCTCCAGGCCCTGCTTCTCCTTGAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | AAACCCAGGAAGAGGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTGGAGCAGAGCCCACAAAACTaGATCCAAGACTGGATGCAA | + |
Preference number: 3 (lower is better) Translates to: KPRKRPIWLGHCLLSRLEQSPQN*IQDWMQ Trigger: TTGCATCCAGTCTTGGATCAAGTTTTGTGGGCTCTG...CTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGCACTTGCACGAACTATaGCTTTCCATGCAGAACCAG | + |
Preference number: 3 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLHLHEL*LSMQNQ Trigger: CTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTG...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
3UTR-3UTR CAA 90 bp | AAGAGGAAGCTAAATAGACCAGTGCTGAGCCAAGTCTCTGAGTGTCCCACTCCCGTCTCAGGAATGAGGTaGGATGCCAAAGAAGAGGCT | + |
Preference number: 3 (lower is better) Translates to: KRKLNRPVLSQVSECPTPVSGMR*DAKEEA Trigger: AGCCTCTTCTTTGGCATCCAACCTCATTCCTGAGAC...GGGAGTGGGACACTCAGAGACTTGGCTCAGCACTGGTCTATTTAGCTTCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | AAACCCAGGAAGAGGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTGGAGTTTTGTATAAAGCCTTaGCCAAAATGCAGAGGCCCC | + |
Preference number: 3 (lower is better) Translates to: KPRKRPIWLGHCLLSRLEFCIKP*PKCRGP Trigger: GGGGCCTCTGCATTTTGGCAAAGGCTTTATACAAAA...CTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | CTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTaGCTCTCCTCTTTGGAAACCTGTAAGTCGGTGATG | + |
Preference number: 3 (lower is better) Translates to: LHCAFLRCWLHG*LSSLETCKSVM Trigger: CATCACCGACTTACAGGTTTCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
3UTR TCA 72 bp | GTGCACTCAGTAAGACAAGCTTCAGCCGTGGGAAACTaGAGCTGCAGCACATGGAGGGCAGAAAGACAATTC | + |
Preference number: 3 (lower is better) Translates to: VHSVRQASAVGN*SCSTWRAERQF Trigger: GAATTGTCTTTCTGCCCTCCATGTGCTGCAGCTTCAGTTTCCCACGGCTGAAGCTTGTCTTACTGAGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
3UTR TCA 72 bp | CTAAACTGGTCTGCGATTTTGTCAAGGCACAACACTTaGATGGGAAGCCTGAGTTCCCTGGGAGCCTGGGTT | + |
Preference number: 3 (lower is better) Translates to: LNWSAILSRHNT*MGSLSSLGAWV Trigger: AACCCAGGCTCCCAGGGAACTCAGGCTTCCCATTCAAGTGTTGTGCCTTGACAAAATCGCAGACCAGTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGATCTGCATCAGTCCTGTaGAGCTGTGAGTACATTAGT | + |
Preference number: 3 (lower is better) Translates to: AALCLSEMLAPWVTLLFGSASVL*SCEYIS Trigger: ACTAATGTACTCACAGCTCAACAGGACTGATGCAGA...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
3UTR-3UTR CAA 90 bp | GGAGGCCTCTCCCAAGGACCCAGAGACACAGCATATAGTCCTCTGGGTAACTACCCTGATGAAGGGCTTTaGCCTTTTGATGTGAAAAAC | + |
Preference number: 3 (lower is better) Translates to: GGLSQGPRDTAYSPLGNYPDEGL*PFDVKN Trigger: GTTTTTCACATCAAAAGGCAAAAGCCCTTCATCAGG...GTAGTTACCCAGAGGACTATATGCTGTGTCTCTGGGTCCTTGGGAGAGGCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | GGAGGCCTCTCCCAAGGACCCAGAGACACAGCATATAGTCCTCTGGGTAACTACGACCCCCAGTTGGATTaGTATATTTTGCATCTGAGT | + |
Preference number: 3 (lower is better) Translates to: GGLSQGPRDTAYSPLGNYDPQLD*YILHLS Trigger: ACTCAGATGCAAAATATACAAATCCAACTGGGGGTC...GTAGTTACCCAGAGGACTATATGCTGTGTCTCTGGGTCCTTGGGAGAGGCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | AAGCCTTGGAGTTCCTTTTTCCCTATTGATCTCAAAGAGGCTTATGGATCTTCCCCCTGGGAGCCTGGGTaGGGAAGTAAGGGGAGAACA | + |
Preference number: 3 (lower is better) Translates to: KPWSSFFPIDLKEAYGSSPWEPG*GSKGRT Trigger: TGTTCTCCCCTTACTTCCCAACCCAGGCTCCCAGGG...GGAAGATCCATAAGCCTCTTTGAGATCAATAGGGAAAAAGGAACTCCAAGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | AAGCCTTGGAGTTCCTTTTTCCCTATTGATCTCAAAGAGGCTTATGGATCTTCCAATGGGCTCCTGGGGTaGCCAGCCTTTCCTGTCCAG | + |
Preference number: 3 (lower is better) Translates to: KPWSSFFPIDLKEAYGSSNGLLG*PAFPVQ Trigger: CTGGACAGGAAAGGCTGGCAACCCCAGGAGCCCATT...GGAAGATCCATAAGCCTCTTTGAGATCAATAGGGAAAAAGGAACTCCAAGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | GATGGAGTCTCTCTAGTTGCTCAAGTCAGCCTATTGTaGATGAGAGTCAGAGGGCGATTCCCAACTCTGCCT | + |
Preference number: 3 (lower is better) Translates to: DGVSLVAQVSLL*MRVRGRFPTLP Trigger: AGGCAGAGTTGGGAATCGCCCTCTGACTCTCATTCACAATAGGCTGACTTGAGCAACTAGAGAGACTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | ACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTTaGGATTTTCCAACGTTAGGCTATGCAAAGGTGTGT | + |
Preference number: 3 (lower is better) Translates to: TRIAKHPGHPPP*DFPTLGYAKVC Trigger: ACACACCTTTGCATAGCCTAACGTTGGAAAATCTCAAGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | AGAAAGCCTTCTTGTGGGCCTTCCTTGAGTGCACACTaGACCTCTGTGTATATGTTCATTCCAGAGGGAGGT | + |
Preference number: 3 (lower is better) Translates to: RKPSCGPSLSAH*TSVYMFIPEGG Trigger: ACCTCCCTCTGGAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | TTAAGCCACTGTGTTAAAAGGCAAAGACACCCAGTATaGGGAAGCAAAGGCCTTCCCCACTCTCTTCCTAGG | + |
Preference number: 3 (lower is better) Translates to: LSHCVKRQRHPV*GSKGLPHSLPR Trigger: CCTAGGAAGAGAGTGGGGAAGGCCTTTGCTTCCCCATACTGGGTGTCTTTGCCTTTTAACACAGTGGCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | CCTAGGCTAACACGTCAGAGGACTGCACTCCCCTCATaGCCTCCACATGTTGTTTGTACTTCCCATAGTTTT | + |
Preference number: 3 (lower is better) Translates to: PRLTRQRTALPS*PPHVVCTSHSF Trigger: AAAACTATGGGAAGTACAAACAACATGTGGAGGCCATGAGGGGAGTGCAGTCCTCTGACGTGTTAGCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | GAGCAAAGTAGATTGAGAAGGAATGGAATGGGCTCCTaGGGTTGCCAGCCTTTCCTGTCCAGTCTGAATGTT | + |
Preference number: 3 (lower is better) Translates to: EQSRLRRNGMGS*GCQPFLSSLNV Trigger: AACATTCAGACTGGACAGGAAAGGCTGGCAACCCCAGGAGCCCATTCCATTCCTTCTCAATCTACTTTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | TGGTCACGCTCAGTCAAGGTTAAAGGCTTCTCCTACTaGATGATGGCTCACTTGACCAGATTGTCGAGCTTC | + |
Preference number: 3 (lower is better) Translates to: WSRSVKVKGFSY*MMAHLTRLSSF Trigger: GAAGCTCGACAATCTGGTCAAGTGAGCCATCATCCAGTAGGAGAAGCCTTTAACCTTGACTGAGCGTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | AAACCCAGGAAGAGGCCAATTTGGCTGGGGCATTGTTTGCTCAGCAGGCTGGAGAAGATCAAAAGTCACTaGCACGAACTATTGCTTTCC | + |
Preference number: 3 (lower is better) Translates to: KPRKRPIWLGHCLLSRLEKIKSH*HELLLS Trigger: GGAAAGCAATAGTTCGTGCAAGTGACTTTTGATCTT...CTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | CCTGGAGTACCCTACACATCAGAACCCTCACAGGCCTTAGCCATCCCATTCCCCCTTGGCAATTCATATTaGGTCATATTAACTGTCCCT | + |
Preference number: 3 (lower is better) Translates to: PGVPYTSEPSQALAIPFPLGNSY*VILTVP Trigger: AGGGACAGTTAATATGACCAAATATGAATTGCCAAG...GGGGAATGGGATGGCTAAGGCCTGTGAGGGTTCTGATGTGTAGGGTACTCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | TGGCTCAGGATGCTTTATTCTTATCTATTGGTAAGCACTCTCCTACAGACTTCCAGAAGCACAGAGGCTTaGTGCCTGGCATGGGATGCC | + |
Preference number: 3 (lower is better) Translates to: WLRMLYSYLLVSTLLQTSRSTEA*CLAWDA Trigger: GGCATCCCATGCCAGGCACAAAGCCTCTGTGCTTCT...GGAAGTCTGTAGGAGAGTGCTTACCAATAGATAAGAATAAAGCATCCTGAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | GATTCATGCAGTGAACACCCATGCAGTTCTATTGCATaGCTGGTATACTCCACTGCAGTGTCAGTGGAGCTG | + |
Preference number: 3 (lower is better) Translates to: DSCSEHPCSSIA*LVYSTAVSVEL Trigger: CAGCTCCACTGACACTGCAGTGGAGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
3UTR TCA 72 bp | ATCATGGGCCTTTCCAGCTTCCCGGAGCCCTTCAAATaGAGAAACCATCCAAGCACGACAACAAAAGGAAAC | + |
Preference number: 3 (lower is better) Translates to: IMGLSSFPEPFK*RNHPSTTTKGN Trigger: GTTTCCTTTTGTTGTCGTGCTTGGATGGTTTCTTCATTTGAAGGGCTCCGGGAAGCTGGAAAGGCCCATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | ACGAAACATAAGCCTCCGGAGCATCTAGTTGGCAACTaGAATTCACAAACCCCAGCCTGTGACACAGAAAGT | + |
Preference number: 3 (lower is better) Translates to: TKHKPPEHLVGN*NSQTPACDTES Trigger: ACTTTCTGTGTCACAGGCTGGGGTTTGTGAATTGCAGTTGCCAACTAGATGCTCCGGAGGCTTATGTTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
3UTR GCA 72 bp | AGTAGATTGAGAAGGAATGGAATGGGCTCCTGGGGTTaGCAGCCTTTCCTGTCCAGTCTGAATGTTAATAGC | + |
Preference number: 3 (lower is better) Translates to: SRLRRNGMGSWG*QPFLSSLNVNS Trigger: GCTATTAACATTCAGACTGGACAGGAAAGGCTGGCAACCCCAGGAGCCCATTCCATTCCTTCTCAATCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | AGCAAAGAAGCCGGTGAAATCCTAATTAGTCTGTGCTaGATGAGCCTAAGTGAGCGGCCATTTCCACAGTGT | + |
Preference number: 3 (lower is better) Translates to: SKEAGEILISLC*MSLSERPFPQC Trigger: ACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCACAGACTAATTAGGATTTCACCGGCTTCTTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | AACAGCAAAGAAGCCGGTGAAATCCTAATTAGTCTGTaGTGCATGAGCCTAAGTGAGCGGCCATTTCCACAG | + |
Preference number: 3 (lower is better) Translates to: NSKEAGEILISL*CMSLSERPFPQ Trigger: CTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCACAGACTAATTAGGATTTCACCGGCTTCTTTGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | TGGGGAAGATGTGTTTCTAACTCCTTCCCACGACTATaGGTAGCATTGAATTCCCTGCCTGAGGATCTTCAG | + |
Preference number: 3 (lower is better) Translates to: WGRCVSNSFPRL*VALNSLPEDLQ Trigger: CTGAAGATCCTCAGGCAGGGAATTCAATGCTACCCATAGTCGTGGGAAGGAGTTAGAAACACATCTTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | TTCCCCATGACTTTAACACTGCTAGGCAAGACAGAATaGAGGGCATATTTAGGATCCCACCCAGCAGTCTAC | + |
Preference number: 3 (lower is better) Translates to: FPMTLTLLGKTE*RAYLGSHPAVY Trigger: GTAGACTGCTGGGTGGGATCCTAAATATGCCCTCCATTCTGTCTTGCCTAGCAGTGTTAAAGTCATGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGCGACTATGGGTAGCATaGAATTCCCTGCCTGAGGAT | + |
Preference number: 3 (lower is better) Translates to: LLLFFLCIPECLCSLTNKRLWVA*NSLPED Trigger: ATCCTCAGGCAGGGAATTCAATGCTACCCATAGTCG...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | TGTGATTTAGTTCTACCAAAGGCCACAAAGCCCATCCCCGCCCCACCTCCCTTTAAGCTATGGTGGAAATaGATATCTTGCTTTGGAAAC | + |
Preference number: 3 (lower is better) Translates to: CDLVLPKATKPIPAPPPFKLWWK*ISCFGN Trigger: GTTTCCAAAGCAAGATATCAATTTCCACCATAGCTT...AAAGGGAGGTGGGGCGGGGATGGGCTTTGTGGCCTTTGGTAGAACTAAATCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | TTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTaGCAAACAAGGCAGCCGCGTCTAGGGAGTCATTTT | + |
Preference number: 3 (lower is better) Translates to: FSFSASPSVYAV*QTRQPRLGSHF Trigger: AAAATGACTCCCTAGACGCGGCTGCCTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | ACTTTAGCTAGCATCATTCAGCCTGTCCTTTTTGTCTaGTTCACCTCTGTTTCCAGGCACCAAGCACTGAGA | + |
Preference number: 3 (lower is better) Translates to: TLASIIQPVLFV*FTSVSRHQALR Trigger: TCTCAGTGCTTGGTGCCTGGAAACAGAGGTGAAGCAGACAAAAAGGACAGGCTGAATGATGCTAGCTAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | TTAGCCTTGAACTCGTGTGCTCCTTTTAGCCTCACTTaGCAGGTCAGAGTCTCTACACTTTGTAAGTCCAGA | + |
Preference number: 3 (lower is better) Translates to: LALNSCAPFSLT*QVRVSTLCKSR Trigger: TCTGGACTTACAAAGTGTAGAGACTCTGACCTGCCAAGTGAGGCTAAAAGGAGCACACGAGTTCAAGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | GTCTGTAATGGAAACAAGAGAATCCTCCTTGCTTTCTaGCACCATTCGTCCTGGCTGTTCCAAGATTACCCT | + |
Preference number: 3 (lower is better) Translates to: VCNGNKRILLAF*HHSSWLFQDYP Trigger: AGGGTAATCTTGGAACAGCCAGGACGAATGGTGCCAGAAAGCAAGGAGGATTCTCTTGTTTCCATTACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | CCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTATATATTTATATACATaGAACCCACAGACCTGCCTG | + |
Preference number: 3 (lower is better) Translates to: PISPQITRIAKHPGHPPPIYLYT*NPQTCL Trigger: CAGGCAGGTCTGTGGGTTCAATGTATATAAATATAT...AGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | ATTGGTAAGCACTCTCCTACAGACTTCCATTACACCTaGCAGACAGACACAAATTCAACAAGACAGGCTGGC | + |
Preference number: 3 (lower is better) Translates to: IGKHSPTDFHYT*QTDTNSTRQAG Trigger: GCCAGCCTGTCTTGTTGAATTTGTGTCTGTCTGTCAGGTGTAATGGAAGTCTGTAGGAGAGTGCTTACCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | TGTCAAAAGAAAGCCTTCTTGTGGGCCTTCCTTGAGTaGACACTGCACCTCTGTGTATATGTTCATTCCAGA | + |
Preference number: 3 (lower is better) Translates to: CQKKAFLWAFLE*TLHLCVYVHSR Trigger: TCTGGAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | TACAGCTCATCTCCAAAGACACAAGTGGGTTTTAGTTaGTCTAGGCCCAGCCCTCTGTTCTTTCATTTGATC | + |
Preference number: 3 (lower is better) Translates to: YSSSPKTQVGFS*SRPSPLFFHLI Trigger: GATCAAATGAAAGAACAGAGGGCTGGGCCTAGAGCAACTAAAACCCACTTGTGTCTTTGGAGATGAGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR CCA 72 bp | AAGACAATAGGGAGAAATCTGGAGATCCCAGACACTTaGAGAGGAGTTCGGGTCCTCAGTGTAGATTTTCTT | + |
Preference number: 3 (lower is better) Translates to: KTIGRNLEIPDT*RGVRVLSVDFL Trigger: AAGAAAATCTACACTGAGGACCCGAACTCCTCTCCAAGTGTCTGGGATCTCCAGATTTCTCCCTATTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTTCTGCATCAGTCCTGTaGAGCTGTGAGTACATTAGT | + |
Preference number: 3 (lower is better) Translates to: AEPDAVEHCRTLTTMQAISASVL*SCEYIS Trigger: ACTAATGTACTCACAGCTCAACAGGACTGATGCAGA...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
3UTR TCA 72 bp | AGAATGTCAAAAGAAAGCCTTCTTGTGGGCCTTCCTTaGGTGCACACTGCACCTCTGTGTATATGTTCATTC | + |
Preference number: 3 (lower is better) Translates to: RMSKESLLVGLP*VHTAPLCICSF Trigger: GAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTTGACATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | CAGGGTTCAGAATCCTATAGTTTCTTGGACCATCACTaGTTCAAGACAATAGGGAGAAATCTGGAGATCCCA | + |
Preference number: 3 (lower is better) Translates to: QGSESYSFLDHH*FKTIGRNLEIP Trigger: TGGGATCTCCAGATTTCTCCCTATTGTCTTGAAGCAGTGATGGTCCAAGAAACTATAGGATTCTGAACCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | TGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTATAAATATAAAGGTTTACTGTACCCATaGGGTTTCTTACACCACCAA | + |
Preference number: 3 (lower is better) Translates to: CCMSLSERPFPQCVYKYKGLLYP*GFLHHQ Trigger: TTGGTGGTGTAAGAAACCCAATGGGTACAGTAAACC...TTTATATTTATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | AACCACACATTTTCCCATTTCTCCTCAAATAACCAGGATCGCAAAGCATCCAGGCAAAGAAGAGGCTCCTaGGAGAATATTGAGGGATAT | + |
Preference number: 3 (lower is better) Translates to: NHTFSHFSSNNQDRKASRQRRGS*ENIEGY Trigger: ATATCCCTCAATATTCTCCAAGGAGCCTCTTCTTTG...CCTGGATGCTTTGCGATCCTGGTTATTTGAGGAGAAATGGGAAAATGTGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | CAGGACTGTGTGTTCTTCTCAACACAAAACCGAGAATaGCCTTTGAGTAGTCACCAGACTTTAGAACTAAGC | + |
Preference number: 3 (lower is better) Translates to: QDCVFFSTQNRE*PLSSHQTLELS Trigger: GCTTAGTTCTAAAGTCTGGTGACTACTCAAAGGTCATTCTCGGTTTTGTGTTGAGAAGAACACACAGTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
3UTR TCA 72 bp | AGAGTTGTCGTCATTGGACTCATGCCTAAGAGTAAGTaGAATGCCACGAGCAAGGAAAGCATTTTAAGAGCT | + |
Preference number: 3 (lower is better) Translates to: RVVVIGLMPKSK*NATSKESILRA Trigger: AGCTCTTAAAATGCTTTCCTTGCTCGTGGCATTTCACTTACTCTTAGGCATGAGTCCAATGACGACAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | AGGCAAGAGGGAATCCTACTTTCCAATCACAAAGGCTaGACCACACATTTTCCCATTTCTCCTCAAATAACC | + |
Preference number: 3 (lower is better) Translates to: RQEGILLSNHKG*TTHFPISPQIT Trigger: GGTTATTTGAGGAGAAATGGGAAAATGTGTGGTTCAGCCTTTGTGATTGGAAAGTAGGATTCCCTCTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | TTAGTTGCTCTAGGCCCAGCCCTCTGTTCTTTCATTTaGTCAGACTCAGCTACATGTGATTTAGTTCTACCA | + |
Preference number: 3 (lower is better) Translates to: LVALGPALCSFI*SDSATCDLVLP Trigger: TGGTAGAACTAAATCACATGTAGCTGAGTCTGATCAAATGAAAGAACAGAGGGCTGGGCCTAGAGCAACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTTCTGCATCAGTCCTGTaGAGCTGTGAGTACATTAGT | + |
Preference number: 3 (lower is better) Translates to: IEIHAVNTHAVLLHDWYTSASVL*SCEYIS Trigger: ACTAATGTACTCACAGCTCAACAGGACTGATGCAGA...AGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR CAA 90 bp | TGGCTCAGGATGCTTTATTCTTATCTATTGGTAAGCACTCTCCTACAGACTTCCATGTTGGTATGCACATaGCATGCTTATGCGGCATAT | + |
Preference number: 3 (lower is better) Translates to: WLRMLYSYLLVSTLLQTSMLVCT*HAYAAY Trigger: ATATGCCGCATAAGCATGCAATGTGCATACCAACAT...GGAAGTCTGTAGGAGAGTGCTTACCAATAGATAAGAATAAAGCATCCTGAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR-3UTR CAA 90 bp | TGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTATAAATATAAACCTCTGTTCTTTCATTaGATCAGACTCAGCTACATG | + |
Preference number: 3 (lower is better) Translates to: CCMSLSERPFPQCVYKYKPLFFH*IRLSYM Trigger: CATGTAGCTGAGTCTGATCAAATGAAAGAACAGAGG...TTTATATTTATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | AAGAAGAAATCAAACACATTCGGTGACCCTGAAGCTTaGAAAATGGTATCTGAAGCTGAGAAGTCCCTGAAT | + |
Preference number: 3 (lower is better) Translates to: KKKSNTFGDPEA*KMVSEAEKSLN Trigger: ATTCAGGGACTTCTCAGCTTCAGATACCATTTTGCAAGCTTCAGGGTCACCGAATGTGTTTGATTTCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
3UTR CCA 72 bp | CACGGGGCAAATATATCTCTTGCAGCTATTCTATGTTaGTATGCACATTGCATGCTTATGCGGCATATACAT | + |
Preference number: 3 (lower is better) Translates to: HGANISLAAILC*YAHCMLMRHIH Trigger: ATGTATATGCCGCATAAGCATGCAATGTGCATACCAACATAGAATAGCTGCAAGAGATATATTTGCCCCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CAA 90 bp | CAGTATGCTAGGGAGAGAGAGTCTGAGTTTAGTAATCAAAATGATGCTTTGGGTCCTGATGAAGGGCTTTaGCCTTTTGATGTGAAAAAC | + |
Preference number: 3 (lower is better) Translates to: QYARERESEFSNQNDALGPDEGL*PFDVKN Trigger: GTTTTTCACATCAAAAGGCAAAAGCCCTTCATCAGG...ACCCAAAGCATCATTTTGATTACTAAACTCAGACTCTCTCTCCCTAGCATACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR-3UTR CAA 90 bp | AAGCCTTGGAGTTCCTTTTTCCCTATTGATCTCAAAGAGGCTTATGGATCTTCCGAGAACAAGTCTAGATaGAATGAATCAAGAGTTGTC | + |
Preference number: 3 (lower is better) Translates to: KPWSSFFPIDLKEAYGSSENKSR*NESRVV Trigger: GACAACTCTTGATTCATTCAATCTAGACTTGTTCTC...GGAAGATCCATAAGCCTCTTTGAGATCAATAGGGAAAAAGGAACTCCAAGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR TCA 72 bp | CAAAGAAGAGGCTCCTTGGAGAATATTGAGGGATATTaGTATGGGCAAGGAAAAGCAATTAAATCTGATCCC | + |
Preference number: 3 (lower is better) Translates to: QRRGSLENIEGY*YGQGKAIKSDP Trigger: GGGATCAGATTTAATTGCTTTTCCTTGCCCATATCAATATCCCTCAATATTCTCCAAGGAGCCTCTTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 72 bp | GCTTATGCGGCATATACATGCTTTGTCTATCTTTTCTaGCTATGCCTCATATTATTTTGGCTGGTGTGCATT | + |
Preference number: 3 (lower is better) Translates to: AYAAYTCFVYLF*LCLILFWLVCI Trigger: AATGCACACCAGCCAAAATAATATGAGGCATAGGCAGAAAAGATAGACAAAGCATGTATATGCCGCATAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
3UTR GCA 72 bp | TTGTATATTTTGCATCTGAGTTGCATGCTGTGCATTTaGACACGGGGCAAATATATCTCTTGCAGCTATTCT | + |
Preference number: 3 (lower is better) Translates to: LYILHLSCMLCI*TRGKYISCSYS Trigger: AGAATAGCTGCAAGAGATATATTTGCCCCGTGTGCAAATGCACAGCATGCAACTCAGATGCAAAATATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CCA 72 bp | AGAATTATACTGTCTTTCTATACATTTAGTAGGAAGTaGCAAGTGGTAGGAGCAGCAGCATCTGATATGCCA | + |
Preference number: 3 (lower is better) Translates to: RIILSFYTFSRK*QVVGAAASDMP Trigger: TGGCATATCAGATGCTGCTGCTCCTACCACTTGCCACTTCCTACTAAATGTATAGAAAGACAGTATAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR-3UTR CAA 90 bp | CAGTATGCTAGGGAGAGAGAGTCTGAGTTTAGTAATCAAAATGATGCTTTGGGTAAACACATGCATAAATaGCCCTGTGTCAAGATATTG | + |
Preference number: 3 (lower is better) Translates to: QYARERESEFSNQNDALGKHMHK*PCVKIL Trigger: CAATATCTTGACACAGGGCAATTTATGCATGTGTTT...ACCCAAAGCATCATTTTGATTACTAAACTCAGACTCTCTCTCCCTAGCATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR TCA 72 bp | AGCATTTTAAGAGCTAAGTCTATAGATCCAACTTTCTaGCCTGGATCCAGACAACACTACTTTGGAAAGAGT | + |
Preference number: 3 (lower is better) Translates to: SILRAKSIDPTF*PGSRQHYFGKS Trigger: ACTCTTTCCAAAGTAGTGTTGTCTGGATCCAGGTCAGAAAGTTGGATCTATAGACTTAGCTCTTAAAATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 72 bp | GGCAAATATATCTCTTGCAGCTATTCTATGTTGGTATaGACATTGCATGCTTATGCGGCATATACATGCTTT | + |
Preference number: 3 (lower is better) Translates to: GKYISCSYSMLV*TLHAYAAYTCF Trigger: AAAGCATGTATATGCCGCATAAGCATGCAATGTGCATACCAACATAGAATAGCTGCAAGAGATATATTTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 72 bp | TCAGCAAGAATGATAACATCTATACACCCTGTGCAATaGAGTTACAGCTGGTGTCTAAATTTTCATGAAGCA | + |
Preference number: 3 (lower is better) Translates to: SARMITSIHPVQ*SYSWCLNFHEA Trigger: TGCTTCATGAAAATTTAGACACCAGCTGTAACTGCATTGCACAGGGTGTATAGATGTTATCATTCTTGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR GCA 72 bp | GATATGGGCAAGGAAAAGCAATTAAATCTGATCCCTTaGCTTCATTTATCAATTTTTAGATGTGGAAGCAGA | + |
Preference number: 3 (lower is better) Translates to: DMGKEKQLNLIP*LHLSIFRCGSR Trigger: TCTGCTTCCACATCTAAAAATTGATAAATGAAGGCAAGGGATCAGATTTAATTGCTTTTCCTTGCCCATATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR GCA 90 bp | GCTTTGTGCCTGGCATGGGATGCCCTGCAGTCACCTGGGGATATGGGTGACCAGGTGAAGGAGGTGGACTaGTGGTACCCGATGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: ALCLAWDALQSPGDMGDQVKEVD*WYPMVL Trigger: CAGCACCATCGGGTACCAGCAGTCCACCTCCTTCAC...CTGGTCACCCATATCCCCAGGTGACTGCAGGGCATCCCATGCCAGGCACAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR GCA 90 bp | CCTGGAGTACCCTACACATCAGAACCCTCACAGGCCTTAGCCATCCCATTCCCCATGGCCTGCTGGCCTTaGTGGGCGTCCTCTGGCTTC | + |
Preference number: 4 (lower is better) Translates to: PGVPYTSEPSQALAIPFPMACWP*WASSGF Trigger: GAAGCCAGAGGACGCCCAGCAAGGCCAGCAGGCCAT...GGGGAATGGGATGGCTAAGGCCTGTGAGGGTTCTGATGTGTAGGGTACTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR GCA 90 bp | CCAAGATTACCCTCAGTGGAGAGAGGGGTGCATGACTGCAGAAACCCAGGAAGAGCCAGTGACATGGCCTaGTGGCCTTGCTGGGCGTCC | + |
Preference number: 4 (lower is better) Translates to: PRLPSVERGVHDCRNPGRASDMA*WPCWAS Trigger: GGACGCCCAGCAAGGCCAGCAGGCCATGTCACTGGC...TCTTCCTGGGTTTCTGCAGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CCA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATAGCAGCCTCGTCCACTaGGTCTCCGGTAGCCACTGT | + |
Preference number: 4 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHSSLVH*VSGSHC Trigger: ACAGTGGCTACCGGAGACCCAGTGGACGAGGCTGCT...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | GGAGGCCTCTCCCAAGGACCCAGAGACACAGCATATAGTCCTCTGGGTAACTACGTCATAGGTGTCTTGTaGGTGCCCAGGGAGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: GGLSQGPRDTAYSPLGNYVIGVL*VPREGS Trigger: GCTGCCCTCCCTGGGCACCCACAAGACACCTATGAC...GTAGTTACCCAGAGGACTATATGCTGTGTCTCTGGGTCCTTGGGAGAGGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAGTCATAGGTGTCTTGTaGGTGCCCAGGGAGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGVIGVL*VPREGS Trigger: GCTGCCCTCCCTGGGCACCCACAAGACACCTATGAC...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR CAA 72 bp | GCAGAAACCCAGGAAGAGGCCAATTTGGCTGGGGCATaGTTTGCTCAGCAGGCTGGAGCTCAATCATGGGCC | + |
Preference number: 4 (lower is better) Translates to: AETQEEANLAGA*FAQQAGAQSWA Trigger: GGCCCATGATTGAGCTCCAGCCTGCTGAGCAAACAATGCCCCAGCCAAATTGGCCTCTTCCTGGGTTTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR TCA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATCTCTTACCAACCGGATaGCACGGAGAATGGCCAGTG | + |
Preference number: 4 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHLLPTG*HGEWPV Trigger: CACTGGCCATTCTCCGTGTCATCCGGTTGGTAAGAG...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | CCAAGATTACCCTCAGTGGAGAGAGGGGTGCATGACTGCAGAAACCCAGGAAGATGCAAGTACTGGGCCTaGTCCTCTCCCTCTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: PRLPSVERGVHDCRNPGRCKYWA*SSPSVS Trigger: GGAGACAGAGGGAGAGGAGCAGGCCCAGTACTTGCA...TCTTCCTGGGTTTCTGCAGTCATGCACCCCTCTCTCCACTGAGGGTAATCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR GCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGTGCAAGTACTGGGCCTaGTCCTCTCCCTCTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLCKYWA*SSPSVS Trigger: GGAGACAGAGGGAGAGGAGCAGGCCCAGTACTTGCA...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | AGGAGAATGATGCAAGGGCTTCTCAGCGGCACACTCAGCTGGAACATATCTGACAGTGACATGGCCTGCTaGCCTTGCTGGGCGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: RRMMQGLLSGTLSWNISDSDMAC*PCWASS Trigger: AGAGGACGCCCAGCAAGGCCAGCAGGCCATGTCACT...GTCAGATATGTTCCAGCTGAGTGTGCCGCTGAGAAGCCCTTGCATCATTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR TCA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATAATCCTGGCAGGCCCTaGGCTCTCAGGGTATTCAAA | + |
Preference number: 4 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHNPGRP*ALRVFK Trigger: TTTGAATACCCTGAGAGCTCAGGGCCTGCCAGGATT...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR TCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGCTCTTACCAACCGGATaGCACGGAGAATGGCCAGTG | + |
Preference number: 4 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLLLPTG*HGEWPV Trigger: CACTGGCCATTCTCCGTGTCATCCGGTTGGTAAGAG...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | TATACTCCACTGCAGTGTCAGTGGAGCTGGGCCACACCACCAGGAAAGCAGATGGCTGGTACCCGATGGTaGTGTTGGAATAGGTGTGGA | + |
Preference number: 4 (lower is better) Translates to: YTPLQCQWSWATPPGKQMAGTRW*CWNRCG Trigger: TCCACACCTATTCCAACAGCACCATCGGGTACCAGC...CATCTGCTTTCCTGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGGAGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | CAGGATAGCTGGAGCTGTGAGGGCTATAGGACCCTTGTGCACTCAGTAAGACAATGCAAGTACTGGGCCTaGTCCTCTCCCTCTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: QDSWSCEGYRTLVHSVRQCKYWA*SSPSVS Trigger: GGAGACAGAGGGAGAGGAGCAGGCCCAGTACTTGCA...TTGTCTTACTGAGTGCACAAGGGTCCTATAGCCCTCACAGCTCCAGCTATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
CDS-3UTR CCA 90 bp | CCTGGAGTACCCTACACATCAGAACCCTCACAGGCCTTAGCCATCCCATTCCCCTTCATGGTCTGCCTCTaGGTCATAGGTGTCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: PGVPYTSEPSQALAIPFPFMVCL*VIGVLW Trigger: CCACAAGACACCTATGACCCAGAGGCAGACCATGAA...GGGGAATGGGATGGCTAAGGCCTGTGAGGGTTCTGATGTGTAGGGTACTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAGTCACTTGCAAGTACTaGGCCTGCTCCTCTCCCTCT | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGVTCKY*ACSSPS Trigger: AGAGGGAGAGGAGCAGGCCCAGTACTTGCAAGTGAC...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR TCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAGACGCTCTTCTTCCTTaGTGTAGCCTTCATCCTCCC | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGDALLP*CSLHPP Trigger: GGGAGGATGAAGGCTACATCAAGGAAGAAGAGCGTC...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR TCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAAATCCTGGCAGGCCCTaGGCTCTCAGGGTATTCAAA | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGNPGRP*ALRVFK Trigger: TTTGAATACCCTGAGAGCTCAGGGCCTGCCAGGATT...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR GCA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTGCCAGTGACATGGCCTaGTGGCCTTGCTGGGCGTCC | + |
Preference number: 4 (lower is better) Translates to: AEPDAVEHCRTLTTMQAIASDMA*WPCWAS Trigger: GGACGCCCAGCAAGGCCAGCAGGCCATGTCACTGGC...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR GCA 90 bp | GAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTCCAGCCAGTGACATGGCCTaGTGGCCTTGCTGGGCGTCC | + |
Preference number: 4 (lower is better) Translates to: EIHAVNTHAVLLHDWYTPASDMA*WPCWAS Trigger: GGACGCCCAGCAAGGCCAGCAGGCCATGTCACTGGC...TGGAGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | TGTGATTTAGTTCTACCAAAGGCCACAAAGCCCATCCCCGCCCCACCTCCCTTTAGAAAGCATCCGGGATaGTGGGGAACTGGGAATCTC | + |
Preference number: 4 (lower is better) Translates to: CDLVLPKATKPIPAPPPFRKHPG*WGTGNL Trigger: GAGATTCCCAGTTCCCCAGCATCCCGGATGCTTTCT...AAAGGGAGGTGGGGCGGGGATGGGCTTTGTGGCCTTTGGTAGAACTAAATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
CDS-3UTR GCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAAGAAAGCATCCGGGATaGTGGGGAACTGGGAATCTC | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGRKHPG*WGTGNL Trigger: GAGATTCCCAGTTCCCCAGCATCCCGGATGCTTTCT...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAACCTCATCCGTTTCTTaGGGTCCCCTAAGAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGTSSVS*GPLRGS Trigger: AGACCCTCTTAGGGGACCCCAAGAAACGGATGAGGT...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR CCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAGGGATGCTGGGGAACTaGGAATCTCTCTCATCAGCT | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGGMLGN*ESLSSA Trigger: AGCTGATGAGAGAGATTCCCAGTTCCCCAGCATCCC...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR CCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAAGCATCCGGGATGCTaGGGAACTGGGAATCTCTCT | + |
Preference number: 4 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLKHPGC*GTGNLS Trigger: AGAGAGATTCCCAGTTCCCCAGCATCCCGGATGCTT...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAACAGCATTCATGGTCTaGCTCTGGGTCATAGGTGTC | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGTAFMV*LWVIGV Trigger: GACACCTATGACCCAGAGGCAGACCATGAATGCTGT...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR GCA 90 bp | AGGAGAATGATGCAAGGGCTTCTCAGCGGCACACTCAGCTGGAACATATCTGACGCTGGTACCCGATGGTaGTGTTGGAATAGGTGTGGA | + |
Preference number: 4 (lower is better) Translates to: RRMMQGLLSGTLSWNISDAGTRW*CWNRCG Trigger: TCCACACCTATTCCAACAGCACCATCGGGTACCAGC...GTCAGATATGTTCCAGCTGAGTGTGCCGCTGAGAAGCCCTTGCATCATTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR GCA 90 bp | GAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTCCAATGGCCTGCTGGCCTTaGTGGGCGTCCTCTGGCTTC | + |
Preference number: 4 (lower is better) Translates to: EIHAVNTHAVLLHDWYTPMACWP*WASSGF Trigger: GAAGCCAGAGGACGCCCAGCAAGGCCAGCAGGCCAT...TGGAGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
CDS-3UTR CCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGTTCATGGTCTGCCTCTaGGTCATAGGTGTCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLFMVCL*VIGVLW Trigger: CCACAAGACACCTATGACCCAGAGGCAGACCATGAA...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGACCCGATGGTGCTGTTaGAATAGGTGTGGAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLTRWCC*NRCGRS Trigger: TGACCTTCCACACCTATTCCAACAGCACCATCGGGT...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAACTGCTGGTACCCGATaGTGCTGTTGGAATAGGTGT | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGTAGTR*CCWNRC Trigger: ACACCTATTCCAACAGCACCATCGGGTACCAGCAGT...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR TCA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAAGCCACACCTGTCTCTaGAACTCATTTTCAGGCAGA | + |
Preference number: 4 (lower is better) Translates to: AALCLSEMLAPWVTLLFGSHTCL*NSFSGR Trigger: TCTGCCTGAAAATGAGTTTCAGAGACAGGTGTGGCT...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGATGGCCTGCTGGCCTTaGTGGGCGTCCTCTGGCTTC | + |
Preference number: 4 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMMACWP*WASSGF Trigger: GAAGCCAGAGGACGCCCAGCAAGGCCAGCAGGCCAT...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTAGCAGCCTCGTCCACTaGGTCTCCGGTAGCCACTGT | + |
Preference number: 4 (lower is better) Translates to: AEPDAVEHCRTLTTMQAISSLVH*VSGSHC Trigger: ACAGTGGCTACCGGAGACCCAGTGGACGAGGCTGCT...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | CAGGATAGCTGGAGCTGTGAGGGCTATAGGACCCTTGTGCACTCAGTAAGACAAACTGCTGGTACCCGATaGTGCTGTTGGAATAGGTGT | + |
Preference number: 4 (lower is better) Translates to: QDSWSCEGYRTLVHSVRQTAGTR*CCWNRC Trigger: ACACCTATTCCAACAGCACCATCGGGTACCAGCAGT...TTGTCTTACTGAGTGCACAAGGGTCCTATAGCCCTCACAGCTCCAGCTATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGTGACATGGCCTGCTaGCCTTGCTGGGCGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: SLARTIAFHAEPDAVEHCSDMAC*PCWASS Trigger: AGAGGACGCCCAGCAAGGCCAGCAGGCCATGTCACT...ACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGACTGGTAAGGCAATaGTTAACACACCTGCAATTG | + |
Preference number: 4 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHGLVRQ*LTHLQL Trigger: CAATTGCAGGTGTGTTAACCATTGCCTTACCAGTCC...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR CAA 72 bp | CTAAGAAAGCACCTGGCCCTGGGATCTCGATTCCCTTaGATCCTTGAGGCAGGAAGGGAAAAGAATCGACCT | + |
Preference number: 4 (lower is better) Translates to: LRKHLALGSRFP*ILEAGREKNRP Trigger: AGGTCGATTCTTTTCCCTTCCTGCCTCAAGGATCAAAGGGAATCGAGATCCCAGGGCCAGGTGCTTTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR GCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGCAGGTCGCCTCAACCTaGCCCCAGACTGATAGTAGT | + |
Preference number: 4 (lower is better) Translates to: LLLFFLCIPECLCSLTNKQVAST*PQTDSS Trigger: ACTACTATCAGTCTGGGGGCAGGTTGAGGCGACCTG...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR GCA 90 bp | CTGGTAAGCTGTGTAGTCATGCCCACGACTAGATTAATCCCCAAAGTTCAGTCAGTCACCCCGCCACCATaGATGTCCTCATTCTCATCC | + |
Preference number: 4 (lower is better) Translates to: LVSCVVMPTTRLIPKVQSVTPPP*MSSFSS Trigger: GGATGAGAATGAGGACATGCATGGTGGCGGGGTGAC...TGACTGAACTTTGGGGATTAATCTAGTCGTGGGCATGACTACACAGCTTACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTGTGAAGGAGGTGGACTaGTGGTACCCGATGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: AEPDAVEHCRTLTTMQAIVKEVD*WYPMVL Trigger: CAGCACCATCGGGTACCAGCAGTCCACCTCCTTCAC...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAAGCAGCCTCGTCCACTaGGTCTCCGGTAGCCACTGT | + |
Preference number: 4 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRSSLVH*VSGSHC Trigger: ACAGTGGCTACCGGAGACCCAGTGGACGAGGCTGCT...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | AAAAGAAAGCCTTCTTGTGGGCCTTCCTTGAGTGCACACTGCACCTCTGTGTATACCTCATCCGTTTCTTaGGGTCCCCTAAGAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: KRKPSCGPSLSAHCTSVYTSSVS*GPLRGS Trigger: AGACCCTCTTAGGGGACCCCAAGAAACGGATGAGGT...ATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CCA 90 bp | TTCCTTGAGTGCACACTGCACCTCTGTGTATATGTTCATTCCAGAGGGAGGTCGACTGCTGGTACCCGATaGTGCTGTTGGAATAGGTGT | + |
Preference number: 4 (lower is better) Translates to: FLECTLHLCVYVHSRGRSTAGTR*CCWNRC Trigger: ACACCTATTCCAACAGCACCATCGGGTACCAGCAGT...CGACCTCCCTCTGGAATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CCA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGGGACTGGTAAGGCAATaGTTAACACACCTGCAATTG | + |
Preference number: 4 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLGLVRQ*LTHLQL Trigger: CAATTGCAGGTGTGTTAACCATTGCCTTACCAGTCC...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR CAA 72 bp | AACCAGGATCGCAAAGCATCCAGGACACCCTCCTCCTaGAGATTTTCCAACGTTAGGCTATGCAAAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: NQDRKASRTPSS*RFSNVRLCKGV Trigger: CACACCTTTGCATAGCCTAACGTTGGAAAATCTCAAGGAGGAGGGTGTCCTGGATGCTTTGCGATCCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR TCA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGGCTAAGGTCTTTAGCTaGGTTTCGAACCGCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: LLLFFLCIPECLCSLTNKAKVFS*VSNRRP Trigger: AGGCCTGCGGTTCGAAACTCAGCTAAAGACCTTAGC...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR TCA 90 bp | CTGGTAAGCTGTGTAGTCATGCCCACGACTAGATTAATCCCCAAAGTTCAGTCAAATCCTGGCAGGCCCTaGGCTCTCAGGGTATTCAAA | + |
Preference number: 4 (lower is better) Translates to: LVSCVVMPTTRLIPKVQSNPGRP*ALRVFK Trigger: TTTGAATACCCTGAGAGCTCAGGGCCTGCCAGGATT...TGACTGAACTTTGGGGATTAATCTAGTCGTGGGCATGACTACACAGCTTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTCAGGTCGCCTCAACCTaGCCCCAGACTGATAGTAGT | + |
Preference number: 4 (lower is better) Translates to: AEPDAVEHCRTLTTMQAIQVAST*PQTDSS Trigger: ACTACTATCAGTCTGGGGGCAGGTTGAGGCGACCTG...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTGTCACCCCGCCACCATaGATGTCCTCATTCTCATCC | + |
Preference number: 4 (lower is better) Translates to: AEPDAVEHCRTLTTMQAIVTPPP*MSSFSS Trigger: GGATGAGAATGAGGACATGCATGGTGGCGGGGTGAC...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | CTGGTAAGCTGTGTAGTCATGCCCACGACTAGATTAATCCCCAAAGTTCAGTCAAGAAAGCATCCGGGATaGTGGGGAACTGGGAATCTC | + |
Preference number: 4 (lower is better) Translates to: LVSCVVMPTTRLIPKVQSRKHPG*WGTGNL Trigger: GAGATTCCCAGTTCCCCAGCATCCCGGATGCTTTCT...TGACTGAACTTTGGGGATTAATCTAGTCGTGGGCATGACTACACAGCTTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGGGACAGCTTGTCACTTaGAAGTACTGGGCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLGQLVT*KYWACS Trigger: GGAGCAGGCCCAGTACTTGCAAGTGACAAGCTGTCC...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAAGGAGGTGGACTGCTaGTACCCGATGGTGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: SLARTIAFHAEPDAVEHCKEVDC*YPMVLL Trigger: CAACAGCACCATCGGGTACCAGCAGTCCACCTCCTT...ACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTAAGGAGGTGGACTGCTaGTACCCGATGGTGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: AEPDAVEHCRTLTTMQAIKEVDC*YPMVLL Trigger: CAACAGCACCATCGGGTACCAGCAGTCCACCTCCTT...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | CTGGTAAGCTGTGTAGTCATGCCCACGACTAGATTAATCCCCAAAGTTCAGTCAAAGCATCCGGGATGCTaGGGAACTGGGAATCTCTCT | + |
Preference number: 4 (lower is better) Translates to: LVSCVVMPTTRLIPKVQSKHPGC*GTGNLS Trigger: AGAGAGATTCCCAGTTCCCCAGCATCCCGGATGCTT...TGACTGAACTTTGGGGATTAATCTAGTCGTGGGCATGACTACACAGCTTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | GAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTCCAGTCACTTGCAAGTACTaGGCCTGCTCCTCTCCCTCT | + |
Preference number: 4 (lower is better) Translates to: EIHAVNTHAVLLHDWYTPVTCKY*ACSSPS Trigger: AGAGGGAGAGGAGCAGGCCCAGTACTTGCAAGTGAC...TGGAGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTGTCACTTGCAAGTACTaGGCCTGCTCCTCTCCCTCT | + |
Preference number: 4 (lower is better) Translates to: SLARTIAFHAEPDAVEHCVTCKY*ACSSPS Trigger: AGAGGGAGAGGAGCAGGCCCAGTACTTGCAAGTGAC...ACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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3UTR CAA 72 bp | AGATTAGCAGAATCCGGTCCCAAGGAGTTTTACTCCTaGGTTTCAAAGCAGAGGATCCGCCTATGGACAGGT | + |
Preference number: 4 (lower is better) Translates to: RLAESGPKEFYS*VSKQRIRLWTG Trigger: ACCTGTCCATAGGCGGATCCTCTGCTTTGAAACCAAGGAGTAAAACTCCTTGGGACCGGATTCTGCTAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR TCA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTTTCGAACCGCAGGCCTaGGATGTTGATGACCACTCT | + |
Preference number: 4 (lower is better) Translates to: AEPDAVEHCRTLTTMQAIFEPQA*DVDDHS Trigger: AGAGTGGTCATCAACATCTCAGGCCTGCGGTTCGAA...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR TCA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGGCTAAGGTCTTTAGCTaGGTTTCGAACCGCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLAKVFS*VSNRRP Trigger: AGGCCTGCGGTTCGAAACTCAGCTAAAGACCTTAGC...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR TCA 90 bp | GAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTCCAGACGCTCTTCTTCCTTaGTGTAGCCTTCATCCTCCC | + |
Preference number: 4 (lower is better) Translates to: EIHAVNTHAVLLHDWYTPDALLP*CSLHPP Trigger: GGGAGGATGAAGGCTACATCAAGGAAGAAGAGCGTC...TGGAGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
||
CDS-3UTR TCA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGACTCTTACCAACCGGATaGCACGGAGAATGGCCAGTG | + |
Preference number: 4 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRLLPTG*HGEWPV Trigger: CACTGGCCATTCTCCGTGTCATCCGGTTGGTAAGAG...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGGTCACCCCGCCACCATaGATGTCCTCATTCTCATCC | + |
Preference number: 4 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMVTPPP*MSSFSS Trigger: GGATGAGAATGAGGACATGCATGGTGGCGGGGTGAC...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR GCA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTGCTGGTACCCGATGGTaGTGTTGGAATAGGTGTGGA | + |
Preference number: 4 (lower is better) Translates to: AEPDAVEHCRTLTTMQAIAGTRW*CWNRCG Trigger: TCCACACCTATTCCAACAGCACCATCGGGTACCAGC...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAGGACAGCTTGTCACTTaGAAGTACTGGGCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRGQLVT*KYWACS Trigger: GGAGCAGGCCCAGTACTTGCAAGTGACAAGCTGTCC...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR CCA 90 bp | CTGGTAAGCTGTGTAGTCATGCCCACGACTAGATTAATCCCCAAAGTTCAGTCATTCATGGTCTGCCTCTaGGTCATAGGTGTCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: LVSCVVMPTTRLIPKVQSFMVCL*VIGVLW Trigger: CCACAAGACACCTATGACCCAGAGGCAGACCATGAA...TGACTGAACTTTGGGGATTAATCTAGTCGTGGGCATGACTACACAGCTTACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGAAGCATCCGGGATGCTaGGGAACTGGGAATCTCTCT | + |
Preference number: 4 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLKHPGC*GTGNLS Trigger: AGAGAGATTCCCAGTTCCCCAGCATCCCGGATGCTT...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR TCA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGTTCGAACCGCAGGCCTaGGATGTTGATGACCACTCT | + |
Preference number: 4 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMFEPQA*DVDDHS Trigger: AGAGTGGTCATCAACATCTCAGGCCTGCGGTTCGAA...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
||
CDS-3UTR GCA 90 bp | ACTTTTCCTGGACTCTTTCCTGTCCAACCTCCCAGAAACTACAACTTTTACAAAGGACAGCTTGTCACTTaGAAGTACTGGGCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: TFPGLFPVQPPRNYNFYKGQLVT*KYWACS Trigger: GGAGCAGGCCCAGTACTTGCAAGTGACAAGCTGTCC...TTTGTAAAAGTTGTAGTTTCTGGGAGGTTGGACAGGAAAGAGTCCAGGAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
||
CDS-3UTR CCA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACCTCATCCGTTTCTTaGGGTCCCCTAAGAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRTSSVS*GPLRGS Trigger: AGACCCTCTTAGGGGACCCCAAGAAACGGATGAGGT...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGTCTCATCCCGGAAGATaGGCAAGGTTTCCAGACAGA | + |
Preference number: 4 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLSHPGR*ARFPDR Trigger: TCTGTCTGGAAACCTTGCCCATCTTCCGGGATGAGA...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTTCTCATCCCGGAAGATaGGCAAGGTTTCCAGACAGA | + |
Preference number: 4 (lower is better) Translates to: SLARTIAFHAEPDAVEHCSHPGR*ARFPDR Trigger: TCTGTCTGGAAACCTTGCCCATCTTCCGGGATGAGA...ACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGGGGATGCTGGGGAACTaGGAATCTCTCTCATCAGCT | + |
Preference number: 4 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMGMLGN*ESLSSA Trigger: AGCTGATGAGAGAGATTCCCAGTTCCCCAGCATCCC...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAGGGATGCTGGGGAACTaGGAATCTCTCTCATCAGCT | + |
Preference number: 4 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRGMLGN*ESLSSA Trigger: AGCTGATGAGAGAGATTCCCAGTTCCCCAGCATCCC...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | AAAAGAAAGCCTTCTTGTGGGCCTTCCTTGAGTGCACACTGCACCTCTGTGTATGGACTGGTAAGGCAATaGTTAACACACCTGCAATTG | + |
Preference number: 4 (lower is better) Translates to: KRKPSCGPSLSAHCTSVYGLVRQ*LTHLQL Trigger: CAATTGCAGGTGTGTTAACCATTGCCTTACCAGTCC...ATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 72 bp | GGTTCCAGTGCTCGATATGGTGCCACATCTTTCCACTaGAAACCTCAGGAGTTATGTCTCAGGAATGAGGTT | + |
Preference number: 4 (lower is better) Translates to: GSSARYGATSFH*KPQELCLRNEV Trigger: AACCTCATTCCTGAGACATAACTCCTGAGGTTTCAAGTGGAAAGATGTGGCACCATATCGAGCACTGGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR TCA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTGACGCTCTTCTTCCTTaGTGTAGCCTTCATCCTCCC | + |
Preference number: 4 (lower is better) Translates to: IEIHAVNTHAVLLHDWYTDALLP*CSLHPP Trigger: GGGAGGATGAAGGCTACATCAAGGAAGAAGAGCGTC...AGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACAGCATTCATGGTCTaGCTCTGGGTCATAGGTGTC | + |
Preference number: 4 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRTAFMV*LWVIGV Trigger: GACACCTATGACCCAGAGGCAGACCATGAATGCTGT...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR GCA 90 bp | AAAACCCCTGTTCAATACCATCCCAAGGCTATTAATACTCTAAGTAGGAATACTGTGAAGGAGGTGGACTaGTGGTACCCGATGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: KTPVQYHPKAINTLSRNTVKEVD*WYPMVL Trigger: CAGCACCATCGGGTACCAGCAGTCCACCTCCTTCAC...AGTATTCCTACTTAGAGTATTAATAGCCTTGGGATGGTATTGAACAGGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGATCTCATCCCGGAAGATaGGCAAGGTTTCCAGACAGA | + |
Preference number: 4 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRSHPGR*ARFPDR Trigger: TCTGTCTGGAAACCTTGCCCATCTTCCGGGATGAGA...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | TGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTATAAATATAAAACCCGATGGTGCTGTTaGAATAGGTGTGGAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: CCMSLSERPFPQCVYKYKTRWCC*NRCGRS Trigger: TGACCTTCCACACCTATTCCAACAGCACCATCGGGT...TTTATATTTATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CCA 90 bp | CTGAACAGCCTGACCACAGTTCATTGTGTTTGTGAGAATTTAAGCCACTGTGTTGGAGGACGGGATCTTTaGACAGCTTGTCACTTGCAA | + |
Preference number: 4 (lower is better) Translates to: LNSLTTVHCVCENLSHCVGGRDL*TACHLQ Trigger: TTGCAAGTGACAAGCTGTCCAAAGATCCCGTCCTCC...AACACAGTGGCTTAAATTCTCACAAACACAATGAACTGTGGTCAGGCTGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CCA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAGGAGGACGGGATCTTTaGACAGCTTGTCACTTGCAA | + |
Preference number: 4 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRGGRDL*TACHLQ Trigger: TTGCAAGTGACAAGCTGTCCAAAGATCCCGTCCTCC...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGGGAGGACGGGATCTTTaGACAGCTTGTCACTTGCAA | + |
Preference number: 4 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMGGRDL*TACHLQ Trigger: TTGCAAGTGACAAGCTGTCCAAAGATCCCGTCCTCC...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR TCA 90 bp | TGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTATAAATATAAAAGCCACACCTGTCTCTaGAACTCATTTTCAGGCAGA | + |
Preference number: 4 (lower is better) Translates to: CCMSLSERPFPQCVYKYKSHTCL*NSFSGR Trigger: TCTGCCTGAAAATGAGTTTCAGAGACAGGTGTGGCT...TTTATATTTATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR TCA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGAGCCACACCTGTCTCTaGAACTCATTTTCAGGCAGA | + |
Preference number: 4 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMSHTCL*NSFSGR Trigger: TCTGCCTGAAAATGAGTTTCAGAGACAGGTGTGGCT...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CCA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTACCCGATGGTGCTGTTaGAATAGGTGTGGAAGGTCA | + |
Preference number: 4 (lower is better) Translates to: IEIHAVNTHAVLLHDWYTTRWCC*NRCGRS Trigger: TGACCTTCCACACCTATTCCAACAGCACCATCGGGT...AGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CAA 72 bp | CAGAATGTCAAAAGAAAGCCTTCTTGTGGGCCTTCCTaGAGTGCACACTGCACCTCTGTGTATATGTTCATT | + |
Preference number: 4 (lower is better) Translates to: QNVKRKPSCGPS*SAHCTSVYMFI Trigger: AATGAACATATACACAGAGGTGCAGTGTGCACTCAAGGAAGGCCCACAAGAAGGCTTTCTTTTGACATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR TCA 90 bp | AAAACCCCTGTTCAATACCATCCCAAGGCTATTAATACTCTAAGTAGGAATACTTTCGAACCGCAGGCCTaGGATGTTGATGACCACTCT | + |
Preference number: 4 (lower is better) Translates to: KTPVQYHPKAINTLSRNTFEPQA*DVDDHS Trigger: AGAGTGGTCATCAACATCTCAGGCCTGCGGTTCGAA...AGTATTCCTACTTAGAGTATTAATAGCCTTGGGATGGTATTGAACAGGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CAA 72 bp | TGTGCAGAAACAATAACAAAGCATCACTTATGTAACTaGCATGTATATCCATTGTCCCCGACCCCCAGTTGG | + |
Preference number: 4 (lower is better) Translates to: CAETITKHHLCN*HVYPLSPTPSW Trigger: CCAACTGGGGGTCGGGGACAATGGATATACATGCAAGTTACATAAGTGATGCTTTGTTATTGTTTCTGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR GCA 90 bp | AAAACCCCTGTTCAATACCATCCCAAGGCTATTAATACTCTAAGTAGGAATACTACAGCATTCATGGTCTaGCTCTGGGTCATAGGTGTC | + |
Preference number: 4 (lower is better) Translates to: KTPVQYHPKAINTLSRNTTAFMV*LWVIGV Trigger: GACACCTATGACCCAGAGGCAGACCATGAATGCTGT...AGTATTCCTACTTAGAGTATTAATAGCCTTGGGATGGTATTGAACAGGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CAA 72 bp | GAGAGAGAGTCTGAGTTTAGTAATCAAAATGATGCTTaGGGTCATTTAGGGAATCCATCCCTTGGTTCTGGA | + |
Preference number: 4 (lower is better) Translates to: ERESEFSNQNDA*GHLGNPSLGSG Trigger: TCCAGAACCAAGGGATGGATTCCCTAAATGACCCAAAGCATCATTTTGATTACTAAACTCAGACTCTCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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3UTR CAA 72 bp | ACACGGGGCAAATATATCTCTTGCAGCTATTCTATGTaGGTATGCACATTGCATGCTTATGCGGCATATACA | + |
Preference number: 4 (lower is better) Translates to: TRGKYISCSYSM*VCTLHAYAAYT Trigger: TGTATATGCCGCATAAGCATGCAATGTGCATACCAACATAGAATAGCTGCAAGAGATATATTTGCCCCGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 72 bp | GGAAACTCAAGTCTCAGTGTGTTAAGTGTACAAGTTTaGAACCACATGTCCATTATCTGCTCATTGCCTCCT | + |
Preference number: 4 (lower is better) Translates to: GNSSLSVLSVQV*NHMSIICSLPP Trigger: AGGAGGCAATGAGCAGATAATGGACATGTGGTTCAAAACTTGTACACTTAACACACTGAGACTTGAGTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 72 bp | CAGAGGCCTCATGAAGCTATGGTGGAAATTGATATCTaGCTTTGGAAACTCAAGTCTCAGTGTGTTAAGTGT | + |
Preference number: 4 (lower is better) Translates to: QRPHEAMVEIDI*LWKLKSQCVKC Trigger: ACACTTAACACACTGAGACTTGAGTTTCCAAAGCAAGATATCAATTTCCACCATAGCTTCATGAGGCCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 72 bp | TTTGTATATTTTGCATCTGAGTTGCATGCTGTGCATTaGCACACGGGGCAAATATATCTCTTGCAGCTATTC | + |
Preference number: 4 (lower is better) Translates to: FVYFASELHAVH*HTGQIYLLQLF Trigger: GAATAGCTGCAAGAGATATATTTGCCCCGTGTGCAAATGCACAGCATGCAACTCAGATGCAAAATATACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 72 bp | TTCAACCTGATTCAGGGTTCAGAATCCTATAGTTTCTaGGACCATCACTGCTTCAAGACAATAGGGAGAAAT | + |
Preference number: 4 (lower is better) Translates to: FNLIQGSESYSF*DHHCFKTIGRN Trigger: ATTTCTCCCTATTGTCTTGAAGCAGTGATGGTCCAAGAAACTATAGGATTCTGAACCCTGAATCAGGTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 72 bp | TATATCTCTTGCAGCTATTCTATGTTGGTATGCACATaGCATGCTTATGCGGCATATACATGCTTTGTCTAT | + |
Preference number: 4 (lower is better) Translates to: YISCSYSMLVCT*HAYAAYTCFVY Trigger: ATAGACAAAGCATGTATATGCCGCATAAGCATGCAATGTGCATACCAACATAGAATAGCTGCAAGAGATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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3UTR CAA 72 bp | TATGCACATTGCATGCTTATGCGGCATATACATGCTTaGTCTATCTTTTCTGCCTATGCCTCATATTATTTT | + |
Preference number: 4 (lower is better) Translates to: YAHCMLMRHIHA*SIFSAYASYYF Trigger: AAAATAATATGAGGCATAGGCAGAAAAGATAGACAAAGCATGTATATGCCGCATAAGCATGCAATGTGCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CAA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATCATGGCCTGCTGGCCTaGCTGGGCGTCCTCTGGCTT | + |
Preference number: 5 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHHGLLA*LGVLWL Trigger: AAGCCAGAGGACGCCCAGCAAGGCCAGCAGGCCATG...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATTGGGTCATAGGTGTCTaGTGGGTGCCCAGGGAGGGC | + |
Preference number: 5 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHWVIGV*WVPREG Trigger: GCCCTCCCTGGGCACCCACAAGACACCTATGACCCA...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGCATGGCCTGCTGGCCTaGCTGGGCGTCCTCTGGCTT | + |
Preference number: 5 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLHGLLA*LGVLWL Trigger: AAGCCAGAGGACGCCCAGCAAGGCCAGCAGGCCATG...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | CCTGGAGTACCCTACACATCAGAACCCTCACAGGCCTTAGCCATCCCATTCCCCTACCTCATCCGTTTCTaGGGGTCCCCTAAGAGGGTC | + |
Preference number: 5 (lower is better) Translates to: PGVPYTSEPSQALAIPFPYLIRF*GSPKRV Trigger: GACCCTCTTAGGGGACCCCAAGAAACGGATGAGGTA...GGGGAATGGGATGGCTAAGGCCTGTGAGGGTTCTGATGTGTAGGGTACTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CAA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATTGGACAGCTTGTCACTaGCAAGTACTGGGCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHWTACH*QVLGLL Trigger: GAGCAGGCCCAGTACTTGCAAGTGACAAGCTGTCCA...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGATGGACAGCTTGTCACTaGCAAGTACTGGGCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: AALCLSEMLAPWVTLLFGWTACH*QVLGLL Trigger: GAGCAGGCCCAGTACTTGCAAGTGACAAGCTGTCCA...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | GGAGGCCTCTCCCAAGGACCCAGAGACACAGCATATAGTCCTCTGGGTAACTACGTGAAGAAGCCAGCTTaGCTGGGACAGGCAAAGAAT | + |
Preference number: 5 (lower is better) Translates to: GGLSQGPRDTAYSPLGNYVKKPA*LGQAKN Trigger: ATTCTTTGCCTGTCCCAGCAAAGCTGGCTTCTTCAC...GTAGTTACCCAGAGGACTATATGCTGTGTCTCTGGGTCCTTGGGAGAGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CAA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATCCCGAAACATCTCCATaGCTTCTTCTCCTAGCTCAT | + |
Preference number: 5 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHPETSP*LLLLAH Trigger: ATGAGCTAGGAGAAGAAGCAATGGAGATGTTTCGGG...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGCATGGCCTGCTGGCCTaGCTGGGCGTCCTCTGGCTT | + |
Preference number: 5 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMHGLLA*LGVLWL Trigger: AAGCCAGAGGACGCCCAGCAAGGCCAGCAGGCCATG...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | CATTTTCAAGGAGAAGCAGGGCCTGGAGGCCTCTCCCAAGGACCCAGAGACACATCTCTAAAGTCCTCATaGCTGTTGTTAACTCCCTCC | + |
Preference number: 5 (lower is better) Translates to: HFQGEAGPGGLSQGPRDTSLKSS*LLLTPS Trigger: GGAGGGAGTTAACAACAGCAATGAGGACTTTAGAGA...TGTGTCTCTGGGTCCTTGGGAGAGGCCTCCAGGCCCTGCTTCTCCTTGAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CAA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGATGGGTCATAGGTGTCTaGTGGGTGCCCAGGGAGGGC | + |
Preference number: 5 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRWVIGV*WVPREG Trigger: GCCCTCCCTGGGCACCCACAAGACACCTATGACCCA...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TATACTCCACTGCAGTGTCAGTGGAGCTGGGCCACACCACCAGGAAAGCAGATGAAGTCCTCATTGCTGTaGTTAACTCCCTCCTGTATC | + |
Preference number: 5 (lower is better) Translates to: YTPLQCQWSWATPPGKQMKSSLL*LTPSCI Trigger: GATACAGGAGGGAGTTAACAACAGCAATGAGGACTT...CATCTGCTTTCCTGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGGAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATAAGTCCTCATTGCTGTaGTTAACTCCCTCCTGTATC | + |
Preference number: 5 (lower is better) Translates to: LCVGVRGLHCAFLRCWLHKSSLL*LTPSCI Trigger: GATACAGGAGGGAGTTAACAACAGCAATGAGGACTT...ATGGAGCCAGCATCTCAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | ATTGAGATTCATGCAGTGAACACCCATGCAGTTCTATTGCATGACTGGTATACTTGGGTCATAGGTGTCTaGTGGGTGCCCAGGGAGGGC | + |
Preference number: 5 (lower is better) Translates to: IEIHAVNTHAVLLHDWYTWVIGV*WVPREG Trigger: GCCCTCCCTGGGCACCCACAAGACACCTATGACCCA...AGTATACCAGTCATGCAATAGAACTGCATGGGTGTTCACTGCATGAATCTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | CTCCTCCTTTTCTTTCTCTGCATCCCCGAGTGTTTATGCAGTCTGACAAACAAGGGGAGGACGGGATCTTaGGACAGCTTGTCACTTGCA | + |
Preference number: 5 (lower is better) Translates to: LLLFFLCIPECLCSLTNKGRTGS*DSLSLA Trigger: TGCAAGTGACAAGCTGTCCAAAGATCCCGTCCTCCC...CTTGTTTGTCAGACTGCATAAACACTCGGGGATGCAGAGAAAGAAAAGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CAA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAAAGTCCTCATTGCTGTaGTTAACTCCCTCCTGTATC | + |
Preference number: 5 (lower is better) Translates to: AALCLSEMLAPWVTLLFGKSSLL*LTPSCI Trigger: GATACAGGAGGGAGTTAACAACAGCAATGAGGACTT...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TGTTGCTATGGTAGGTTGTGTGTGGGTGTGAGGGGGCTGCATTGTGCCTTTCTGTCTCTAAAGTCCTCATaGCTGTTGTTAACTCCCTCC | + |
Preference number: 5 (lower is better) Translates to: CCYGRLCVGVRGLHCAFLSLKSS*LLLTPS Trigger: GGAGGGAGTTAACAACAGCAATGAGGACTTTAGAGA...CAGAAAGGCACAATGCAGCCCCCTCACACCCACACACAACCTACCATAGCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TATACTCCACTGCAGTGTCAGTGGAGCTGGGCCACACCACCAGGAAAGCAGATGTTAGCCAAGGTACAGTaGGCTGTTTTTAAGTTCTCC | + |
Preference number: 5 (lower is better) Translates to: YTPLQCQWSWATPPGKQMLAKVQ*AVFKFS Trigger: GGAGAACTTAAAAACAGCCAACTGTACCTTGGCTAA...CATCTGCTTTCCTGGTGGTGTGGCCCAGCTCCACTGACACTGCAGTGGAGTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGTACCTCATCCGTTTCTaGGGGTCCCCTAAGAGGGTC | + |
Preference number: 5 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLYLIRF*GSPKRV Trigger: GACCCTCTTAGGGGACCCCAAGAAACGGATGAGGTA...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGTGGACAGCTTGTCACTaGCAAGTACTGGGCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLWTACH*QVLGLL Trigger: GAGCAGGCCCAGTACTTGCAAGTGACAAGCTGTCCA...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGGGGAGGACGGGATCTTaGGACAGCTTGTCACTTGCA | + |
Preference number: 5 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLGRTGS*DSLSLA Trigger: TGCAAGTGACAAGCTGTCCAAAGATCCCGTCCTCCC...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS TCA 90 bp | CCTGTCTCTGAAACTCATTTTCAGGCAGAGGACGCTCTTCTTCCTTaGTGTAGCCTTCATCCTCCCGAAACATCTCCATTGCTTCTTCTC | + |
Preference number: 5 (lower is better) Translates to: PVSETHFQAEDALLP*CSLHPPETSPLLLL Trigger: GAGAAGAAGCAATGGAGATGTTTCGGGAGGATGAAGGCTACATCAAGGAAGAAGAGCGTCCTCTGCCTGAAAATGAGTTTCAGAGACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | GCTGCATTGTGCCTTTCTGAGATGCTGGCTCCATGGGTGACTCTCCTCTTTGGAGAGTGTCTGGACAACTaGAAAATCCTAAAGACTCTT | + |
Preference number: 5 (lower is better) Translates to: AALCLSEMLAPWVTLLFGECLDN*KILKTL Trigger: AAGAGTCTTTAGGATTTTCAAGTTGTCCAGACACTC...TCCAAAGAGGAGAGTCACCCATGGAGCCAGCATCTCAGAAAGGCACAATGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TTAGAACTAAGCCACAATGGTATGTTCCTCTGTGAAGGGGCAGATGGGCTGAAAGGATCTTTGGACAGCTaGTCACTTGCAAGTACTGGG | + |
Preference number: 5 (lower is better) Translates to: LELSHNGMFLCEGADGLKGSLDS*SLASTG Trigger: CCCAGTACTTGCAAGTGACAAGCTGTCCAAAGATCC...TTTCAGCCCATCTGCCCCTTCACAGAGGAACATACCATTGTGGCTTAGTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | CGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAACACTGTAGAACACTGCCCGAAACATCTCCATaGCTTCTTCTCCTAGCTCAT | + |
Preference number: 5 (lower is better) Translates to: RTIAFHAEPDAVEHCRTLPETSP*LLLLAH Trigger: ATGAGCTAGGAGAAGAAGCAATGGAGATGTTTCGGG...CAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAGTGAAGAAGCCAGCTTaGCTGGGACAGGCAAAGAAT | + |
Preference number: 5 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRVKKPA*LGQAKN Trigger: ATTCTTTGCCTGTCCCAGCAAAGCTGGCTTCTTCAC...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TCAAAAGTCACTTGCACGAACTATTGCTTTCCATGCAGAACCAGATGCTGTAGAGGATCTTTGGACAGCTaGTCACTTGCAAGTACTGGG | + |
Preference number: 5 (lower is better) Translates to: SKVTCTNYCFPCRTRCCRGSLDS*SLASTG Trigger: CCCAGTACTTGCAAGTGACAAGCTGTCCAAAGATCC...TCTACAGCATCTGGTTCTGCATGGAAAGCAATAGTTCGTGCAAGTGACTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | GTTAAGTGTACAAGTTTTGAACCACATGTCCATTATCTGCTCATTGCCTCCTCTCCCGAAACATCTCCATaGCTTCTTCTCCTAGCTCAT | + |
Preference number: 5 (lower is better) Translates to: VKCTSFEPHVHYLLIASSPETSP*LLLLAH Trigger: ATGAGCTAGGAGAAGAAGCAATGGAGATGTTTCGGG...AGAGGAGGCAATGAGCAGATAATGGACATGTGGTTCAAAACTTGTACACTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CAA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGTCTCTAAAGTCCTCATaGCTGTTGTTAACTCCCTCC | + |
Preference number: 5 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMSLKSS*LLLTPS Trigger: GGAGGGAGTTAACAACAGCAATGAGGACTTTAGAGA...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | GCAGAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTTTAGCCAAGGTACAGTaGGCTGTTTTTAAGTTCTCC | + |
Preference number: 5 (lower is better) Translates to: AEPDAVEHCRTLTTMQAILAKVQ*AVFKFS Trigger: GGAGAACTTAAAAACAGCCAACTGTACCTTGGCTAA...AATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | AAAACCCCTGTTCAATACCATCCCAAGGCTATTAATACTCTAAGTAGGAATACTGTGAAGAAGCCAGCTTaGCTGGGACAGGCAAAGAAT | + |
Preference number: 5 (lower is better) Translates to: KTPVQYHPKAINTLSRNTVKKPA*LGQAKN Trigger: ATTCTTTGCCTGTCCCAGCAAAGCTGGCTTCTTCAC...AGTATTCCTACTTAGAGTATTAATAGCCTTGGGATGGTATTGAACAGGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038695.6 ENSMUST00000197470.5 |
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CDS-3UTR CAA 90 bp | TGCTGCATGAGCCTAAGTGAGCGGCCATTTCCACAGTGTGTGTATAAATATAAATTAGCCAAGGTACAGTaGGCTGTTTTTAAGTTCTCC | + |
Preference number: 5 (lower is better) Translates to: CCMSLSERPFPQCVYKYKLAKVQ*AVFKFS Trigger: GGAGAACTTAAAAACAGCCAACTGTACCTTGGCTAA...TTTATATTTATACACACACTGTGGAAATGGCCGCTCACTTAGGCTCATGCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038695.6 |
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CDS-3UTR CAA 90 bp | GAACCAGATGCTGTAGAACACTGTAGAACACTGACTACAATGCAGGCTATTATGGAGTGTCTGGACAACTaGAAAATCCTAAAGACTCTT | + |
Preference number: 5 (lower is better) Translates to: EPDAVEHCRTLTTMQAIMECLDN*KILKTL Trigger: AAGAGTCTTTAGGATTTTCAAGTTGTCCAGACACTC...CATAATAGCCTGCATTGTAGTCAGTGTTCTACAGTGTTCTACAGCATCTGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS GCA 72 bp | TCAGGGGAGGACGGGATCTTTGGACAGCTTGTCACTTaGAAGTACTGGGCCTGCTCCTCTCCCTCTGTCTCC | + |
Preference number: 6 (lower is better) Translates to: SGEDGIFGQLVT*KYWACSSPSVS Trigger: GGAGACAGAGGGAGAGGAGCAGGCCCAGTACTTGCAAGTGACAAGCTGTCCAAAGATCCCGTCCTCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS CAA 72 bp | TTCTACTTTTCTTTAGGTCAGGGGAGGACGGGATCTTaGGACAGCTTGTCACTTGCAAGTACTGGGCCTGCT | + |
Preference number: 6 (lower is better) Translates to: FYFSLGQGRTGS*DSLSLASTGPA Trigger: AGCAGGCCCAGTACTTGCAAGTGACAAGCTGTCCAAAGATCCCGTCCTCCCCTGACCTAAAGAAAAGTAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |
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CDS TCA 72 bp | GAAACTCATTTTCAGGCAGAGGACGCTCTTCTTCCTTaGTGTAGCCTTCATCCTCCCGAAACATCTCCATTG | + |
Preference number: 6 (lower is better) Translates to: ETHFQAEDALLP*CSLHPPETSPL Trigger: CAATGGAGATGTTTCGGGAGGATGAAGGCTACATCAAGGAAGAAGAGCGTCCTCTGCCTGAAAATGAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038695.6 ENSMUST00000196403.2 ENSMUST00000197470.5 |