Pregenerated sensors for KCNA10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042861Ensembl transcript IDs: ENSMUST00000055064.8
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GAACAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTaGGCCATAGAACATAATTTTCATCTTAGGAAAACAGTGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: EQKHGFIKTAHRDGL*AIEHNFHLRKTVRG Trigger: TCCTCTCACTGTTTTCCTAAGATGAAAATTATGTTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGCCCCAGCTCCCGCATaGAAGCCTTCAGCGTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEAPAPA*KPSASA Trigger: GGCAGACGCTGAAGGCTTCCATGCGGGAGCTGGGGC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR GCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGCCAGGGACATGTTCTaGTGGGCACTTGGCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEARDMF*WALGSV Trigger: GACCGAGCCAAGTGCCCAGCAGAACATGTCCCTGGC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATCCTCCTGGGGTGGTTaGGCACATGTCACCGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIESSWGG*AHVTVA Trigger: GGCTACGGTGACATGTGCCCAACCACCCCAGGAGGA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGATAGGCACGTTGGCTaGCCGCCGTATTTTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEDRHVG*PPYFPT Trigger: GGTGGGAAAATACGGCGGCCAGCCAACGTGCCTATC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAACCCGGAACTGGTCCATaGCCTCGCTACCCAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEPGTGP*PRYPVH Trigger: ATGAACTGGGTAGCGAGGCCATGGACCAGTTCCGGG...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAAGGGACATGTTCTGCTaGGCACTTGGCTCGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIERDMFC*ALGSVS Trigger: GGAGACCGAGCCAAGTGCCCAGCAGAACATGTCCCT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR TCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAAGCCAGAATTGCCGGTaGAAGTCATTGGTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIESQNCR*KSLVGS Trigger: GCTGCCCACCAATGACTTTCACCGGCAATTCTGGCT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR GCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGTCTGCCCCAGGATCTaGAGCCCTTTAGAGTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEVCPRI*SPLECR Trigger: TCGACACTCTAAAGGGCTGCAGATCCTGGGGCAGAC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGGCGGCCTTTTGAGCTaGTTGGGTCAAAGTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEGGLLS*LGQSLW Trigger: CCACAGACTTTGACCCAACCAGCTCAAAAGGCCGCC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGCCGGTGAAAGTCATTaGTGGGCAGCAGTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEAGESH*WAAVSQ Trigger: CTGAGACACTGCTGCCCACCAATGACTTTCACCGGC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATCTTTCCTCCTGGGGTaGTTGGGCACATGTCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIESFLLG*LGTCHR Trigger: ACGGTGACATGTGCCCAACCACCCCAGGAGGAAAGA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR GCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAACTTCCTGGACTTCTCTaGAGAGCAGCTGCCATTGGT | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIELPGLL*RAAAIG Trigger: ACCAATGGCAGCTGCTCTGCAGAGAAGTCCAGGAAG...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAAGAAGTCAGTCTTGCTaGGGCAGACCACAAACCGGA | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIERSQSC*GRPQTG Trigger: TCCGGTTTGTGGTCTGCCCCAGCAAGACTGACTTCT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAACACAATCTTTCCTCCTaGGGTGGTTGGGCACATGTC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEHNLSS*GGWAHV Trigger: GACATGTGCCCAACCACCCCAGGAGGAAAGATTGTG...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR TCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATGCCATTGGTCTTGTTaGGAGACTCAGTACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIECHWSC*ETQYSP Trigger: TGGGGAGTACTGAGTCTCTCAACAAGACCAATGGCA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGGAATGCTAGAGAAATaGGACTCTGGCTCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEGMLEK*DSGSST Trigger: GGTGGATGAGCCAGAGTCCCATTTCTCTAGCATTCC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR TCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGTACTAGCTCTGTTATaGGGGTTGCAAAGTAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEVLALL*GLQSRG Trigger: TCCCCTACTTTGCAACCCTCATAACAGAGCTAGTAC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR TCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATGGAGCCCATGCTGTTaGGGATTTTGTCAAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEWSPCC*GFCQVL Trigger: GAGAACTTGACAAAATCCTCAACAGCATGGGCTCCA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGTCTGTGGCATAGCCTaGCTCTTCATGGATTTCATC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEVCGIA*LFMDFI Trigger: GATGAAATCCATGAAGAGCCAGGCTATGCCACAGAC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATTGGGTCAAAGTCTGTaGCATAGCCTGGCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIELGQSL*HSLALH Trigger: ATGAAGAGCCAGGCTATGCCACAGACTTTGACCCAA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAACTCTCCTGGGATCTTaGAGAAGGCAGTTTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIETLLGS*RRQFHG Trigger: ACCATGAAACTGCCTTCTCCAAGATCCCAGGAGAGT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAATCCACATACTCTCCTaGGATCTTGGAGAAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEIHILS*DLGEGS Trigger: ACTGCCTTCTCCAAGATCCCAGGAGAGTATGTGGAT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAAGAGAAATGGGACTCTaGCTCATCCACCTCAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEREMGL*LIHLSK Trigger: TTTGCTGAGGTGGATGAGCCAGAGTCCCATTTCTCT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATTCTCCTGGGATGTTTaGCTTCTCCTCGTTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEFSWDV*LLLVLS Trigger: ACTGAGAACGAGGAGAAGCCAAACATCCCAGGAGAA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR GCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAACTCTGTTATGAGGGTTaGAAAGTAGGGGATGATGGA | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIELCYEG*KVGDDG Trigger: TCCATCATCCCCTACTTTGCAACCCTCATAACAGAG...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATCAGTGAACATGGTCTaGGAGAGGCCTGTTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIESVNMV*ERPVLF Trigger: AAACAAAACAGGCCTCTCCCAGACCATGTTCACTGA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR TCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAACCGAGTTATCAAAATTaGCCAGAGCAACCTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEPSYQN*PEQPPF Trigger: AAATGGAGGTTGCTCTGGTCAATTTTGATAACTCGG...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGAGAAGGCAGTTTCATaGTTGGTGTTGTCACTGATA | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEEKAVS*LVLSLI Trigger: TATCAGTGACAACACCAACCATGAAACTGCCTTCTC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATTGATGATCACCCTTTaGTTTCCCTCATTCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIELMITL*FPSFKT Trigger: GGTCTTGAATGAGGGAAACCAAAGGGTGATCATCAA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATCCCAGGAGTGTCTCTaGGAATTGATTAAGTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QKHGFIKTAHRDGLLAIESQECL*ELIKCS Trigger: AGAACACTTAATCAATTCCCAGAGACACTCCTGGGA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| 3UTR CAA 72 bp | CATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTaGGCCATAGAACATAATTTTCATCTTAGGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: HGFIKTAHRDGL*AIEHNFHLRKT Trigger: TGTTTTCCTAAGATGAAAATTATGTTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS TCA 90 bp | AAGGACTCTCCAATTGGAAAAGGGACTGCTACCAGGGCGGCCTTTTaGGCTGGTTGGGTCAAAGTCTGTGGCATAGCCTGGCTCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: KDSPIGKGTATRAAF*AGWVKVCGIAWLFM Trigger: CATGAAGAGCCAGGCTATGCCACAGACTTTGACCCAACCAGCTCAAAAGGCCGCCCTGGTAGCAGTCCCTTTTCCAATTGGAGAGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 90 bp | CTCTCCAATTGGAAAAGGGACTGCTACCAGGGCGGCCTTTTGAGCTaGTTGGGTCAAAGTCTGTGGCATAGCCTGGCTCTTCATGGATTT | + |
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Preference number: 5 (lower is better) Translates to: LSNWKRDCYQGGLLS*LGQSLWHSLALHGF Trigger: AAATCCATGAAGAGCCAGGCTATGCCACAGACTTTGACCCAACCAGCTCAAAAGGCCGCCCTGGTAGCAGTCCCTTTTCCAATTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 90 bp | AGCAATGTTGATGATCACCCTTTGGTTTCCCTCATTCAAGACCACTaGCTCAGGTCCCGGGGGATCCACATACTCTCCTGGGATCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SNVDDHPLVSLIQDH*LRSRGIHILSWDLG Trigger: TCCAAGATCCCAGGAGAGTATGTGGATCCCCCGGGACCTGAGCCAGTGGTCTTGAATGAGGGAAACCAAAGGGTGATCATCAACATTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 90 bp | CCCCATTCTGGAGCCCATGCTGTTGAGGATTTTGTCAAGTTCTCCTaGGATGTTTGGCTTCTCCTCGTTCTCAGTCTCACGGTGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: PHSGAHAVEDFVKFS*DVWLLLVLSLTVVE Trigger: TTCTACCACCGTGAGACTGAGAACGAGGAGAAGCCAAACATCCCAGGAGAACTTGACAAAATCCTCAACAGCATGGGCTCCAGAATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 90 bp | GACTGCTACCAGGGCGGCCTTTTGAGCTGGTTGGGTCAAAGTCTGTaGCATAGCCTGGCTCTTCATGGATTTCATCCGAGTTATCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: DCYQGGLLSWLGQSL*HSLALHGFHPSYQN Trigger: ATTTTGATAACTCGGATGAAATCCATGAAGAGCCAGGCTATGCCACAGACTTTGACCCAACCAGCTCAAAAGGCCGCCCTGGTAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 90 bp | ATGCAGGTGGACTCCACCATGAAGAAAGGATCAGTGAACATGGTCTaGGAGAGGCCTGTTTTGTTTGTATTGATGCTGGGGTCTCTGACC | + |
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Preference number: 5 (lower is better) Translates to: MQVDSTMKKGSVNMV*ERPVLFVLMLGSLT Trigger: GGTCAGAGACCCCAGCATCAATACAAACAAAACAGGCCTCTCCCAGACCATGTTCACTGATCCTTTCTTCATGGTGGAGTCCACCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATTCCTCCTGGGGTGGTaGGGCACATGTCACCGTAGC | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEFLLGW*GTCHRS Trigger: GCTACGGTGACATGTGCCCAACCACCCCAGGAGGAA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 90 bp | GGGGGATCCACATACTCTCCTGGGATCTTGGAGAAGGCAGTTTCATaGTTGGTGTTGTCACTGATAAGGACTCTCCAATTGGAAAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GGSTYSPGILEKAVS*LVLSLIRTLQLEKG Trigger: TCCCTTTTCCAATTGGAGAGTCCTTATCAGTGACAACACCAACCATGAAACTGCCTTCTCCAAGATCCCAGGAGAGTATGTGGATCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATACCAGGGCGGCCTTTaGAGCTGGTTGGGTCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEYQGGL*SWLGQS Trigger: ACTTTGACCCAACCAGCTCAAAAGGCCGCCCTGGTA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGTTCTCCTGGGATGTTaGGCTTCTCCTCGTTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEVLLGC*ASPRSQ Trigger: CTGAGAACGAGGAGAAGCCAAACATCCCAGGAGAAC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATACTCTCCTGGGATCTaGGAGAAGGCAGTTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEYSPGI*EKAVSW Trigger: CCATGAAACTGCCTTCTCCAAGATCCCAGGAGAGTA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAACAGCTGCCATTGGTCTaGTTGAGAGACTCAGTACTC | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEQLPLV*LRDSVL Trigger: GAGTACTGAGTCTCTCAACAAGACCAATGGCAGCTG...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAACCTGTTTTGTTTGTATaGATGCTGGGGTCTCTGACC | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEPVLFV*MLGSLT Trigger: GGTCAGAGACCCCAGCATCAATACAAACAAAACAGG...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAAAGGCAGTTTCATGGTaGGTGTTGTCACTGATAAGG | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEKAVSW*VLSLIR Trigger: CCTTATCAGTGACAACACCAACCATGAAACTGCCTT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGTTGATGATCACCCTTaGGTTTCCCTCATTCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEVDDHP*VSLIQD Trigger: GTCTTGAATGAGGGAAACCAAAGGGTGATCATCAAC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAACTCAGACCAGCAATGTaGATGATCACCCTTTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIELRPAM*MITLWF Trigger: AAACCAAAGGGTGATCATCAACATTGCTGGTCTGAG...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAGAGTGTCTCTGGGAATaGATTAAGTGTTCTGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEECLWE*IKCSEL Trigger: CAGCTCAGAACACTTAATCAATTCCCAGAGACACTC...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAAAAGAGAAGCCAGAATaGCCGGTGAAAGTCATTGGT | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEKEKPE*PVKVIG Trigger: ACCAATGACTTTCACCGGCAATTCTGGCTTCTCTTT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAAATGCTGTTGAGGATTTaGTCAAGTTCTCCTGGGATG | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIEMLLRI*SSSPGM Trigger: CATCCCAGGAGAACTTGACAAAATCCTCAACAGCAT...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACATGGATTTATTAAGACAGCTCACAGAGATGGCCTCTTGGCCATAGAATCCGAGTTATCAAAATaGACCAGAGCAACCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: QKHGFIKTAHRDGLLAIESELSK*TRATSI Trigger: AATGGAGGTTGCTCTGGTCAATTTTGATAACTCGGA...TTCTATGGCCAAGAGGCCATCTCTGTGAGCTGTCTTAATAAATCCATGTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS TCA 72 bp | CCAATTGGAAAAGGGACTGCTACCAGGGCGGCCTTTTaGGCTGGTTGGGTCAAAGTCTGTGGCATAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PIGKGTATRAAF*AGWVKVCGIAW Trigger: CCAGGCTATGCCACAGACTTTGACCCAACCAGCTCAAAAGGCCGCCCTGGTAGCAGTCCCTTTTCCAATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 72 bp | CACTGGCTCAGGTCCCGGGGGATCCACATACTCTCCTaGGATCTTGGAGAAGGCAGTTTCATGGTTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: HWLRSRGIHILS*DLGEGSFMVGV Trigger: AACACCAACCATGAAACTGCCTTCTCCAAGATCCCAGGAGAGTATGTGGATCCCCCGGGACCTGAGCCAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 72 bp | GATGATCACCCTTTGGTTTCCCTCATTCAAGACCACTaGCTCAGGTCCCGGGGGATCCACATACTCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: DDHPLVSLIQDH*LRSRGIHILSW Trigger: CCAGGAGAGTATGTGGATCCCCCGGGACCTGAGCCAGTGGTCTTGAATGAGGGAAACCAAAGGGTGATCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 72 bp | CTGGACTTCTCTGCAGAGCAGCTGCCATTGGTCTTGTaGAGAGACTCAGTACTCCCCATTCTGGAGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: LDFSAEQLPLVL*RDSVLPILEPM Trigger: CATGGGCTCCAGAATGGGGAGTACTGAGTCTCTCAACAAGACCAATGGCAGCTGCTCTGCAGAGAAGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 72 bp | TTCCTGGACTTCTCTGCAGAGCAGCTGCCATTGGTCTaGTTGAGAGACTCAGTACTCCCCATTCTGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FLDFSAEQLPLV*LRDSVLPILEP Trigger: GGGCTCCAGAATGGGGAGTACTGAGTCTCTCAACAAGACCAATGGCAGCTGCTCTGCAGAGAAGTCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 90 bp | ACCACTGGCTCAGGTCCCGGGGGATCCACATACTCTCCTGGGATCTaGGAGAAGGCAGTTTCATGGTTGGTGTTGTCACTGATAAGGACT | + |
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Preference number: 6 (lower is better) Translates to: TTGSGPGGSTYSPGI*EKAVSWLVLSLIRT Trigger: AGTCCTTATCAGTGACAACACCAACCATGAAACTGCCTTCTCCAAGATCCCAGGAGAGTATGTGGATCCCCCGGGACCTGAGCCAGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 90 bp | GAGCTGAGTCTCGAATCTCAGACCAGCAATGTTGATGATCACCCTTaGGTTTCCCTCATTCAAGACCACTGGCTCAGGTCCCGGGGGATC | + |
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Preference number: 6 (lower is better) Translates to: ELSLESQTSNVDDHP*VSLIQDHWLRSRGI Trigger: GATCCCCCGGGACCTGAGCCAGTGGTCTTGAATGAGGGAAACCAAAGGGTGATCATCAACATTGCTGGTCTGAGATTCGAGACTCAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 90 bp | AAGGCAGTTTCATGGTTGGTGTTGTCACTGATAAGGACTCTCCAATaGGAAAAGGGACTGCTACCAGGGCGGCCTTTTGAGCTGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: KAVSWLVLSLIRTLQ*EKGLLPGRPFELVG Trigger: CCCAACCAGCTCAAAAGGCCGCCCTGGTAGCAGTCCCTTTTCCAATTGGAGAGTCCTTATCAGTGACAACACCAACCATGAAACTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 72 bp | GGAGCCCATGCTGTTGAGGATTTTGTCAAGTTCTCCTaGGATGTTTGGCTTCTCCTCGTTCTCAGTCTCACG | + |
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Preference number: 6 (lower is better) Translates to: GAHAVEDFVKFS*DVWLLLVLSLT Trigger: CGTGAGACTGAGAACGAGGAGAAGCCAAACATCCCAGGAGAACTTGACAAAATCCTCAACAGCATGGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 72 bp | GTACTCCCCATTCTGGAGCCCATGCTGTTGAGGATTTaGTCAAGTTCTCCTGGGATGTTTGGCTTCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VLPILEPMLLRI*SSSPGMFGFSS Trigger: CGAGGAGAAGCCAAACATCCCAGGAGAACTTGACAAAATCCTCAACAGCATGGGCTCCAGAATGGGGAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 90 bp | AGAGACTCAGTACTCCCCATTCTGGAGCCCATGCTGTTGAGGATTTaGTCAAGTTCTCCTGGGATGTTTGGCTTCTCCTCGTTCTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RDSVLPILEPMLLRI*SSSPGMFGFSSFSV Trigger: GACTGAGAACGAGGAGAAGCCAAACATCCCAGGAGAACTTGACAAAATCCTCAACAGCATGGGCTCCAGAATGGGGAGTACTGAGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 90 bp | GTCTTGTTGAGAGACTCAGTACTCCCCATTCTGGAGCCCATGCTGTaGAGGATTTTGTCAAGTTCTCCTGGGATGTTTGGCTTCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VLLRDSVLPILEPML*RILSSSPGMFGFSS Trigger: CGAGGAGAAGCCAAACATCCCAGGAGAACTTGACAAAATCCTCAACAGCATGGGCTCCAGAATGGGGAGTACTGAGTCTCTCAACAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS TCA 72 bp | GAGACTCAGTACTCCCCATTCTGGAGCCCATGCTGTTaGGGATTTTGTCAAGTTCTCCTGGGATGTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: ETQYSPFWSPCC*GFCQVLLGCLA Trigger: AGCCAAACATCCCAGGAGAACTTGACAAAATCCTCAACAGCATGGGCTCCAGAATGGGGAGTACTGAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 72 bp | TCATGGTTGGTGTTGTCACTGATAAGGACTCTCCAATaGGAAAAGGGACTGCTACCAGGGCGGCCTTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SWLVLSLIRTLQ*EKGLLPGRPFE Trigger: CTCAAAAGGCCGCCCTGGTAGCAGTCCCTTTTCCAATTGGAGAGTCCTTATCAGTGACAACACCAACCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 72 bp | CTCGAATCTCAGACCAGCAATGTTGATGATCACCCTTaGGTTTCCCTCATTCAAGACCACTGGCTCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LESQTSNVDDHP*VSLIQDHWLRS Trigger: GGACCTGAGCCAGTGGTCTTGAATGAGGGAAACCAAAGGGTGATCATCAACATTGCTGGTCTGAGATTCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 72 bp | AGAGACTCAGTACTCCCCATTCTGGAGCCCATGCTGTaGAGGATTTTGTCAAGTTCTCCTGGGATGTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: RDSVLPILEPML*RILSSSPGMFG Trigger: GCCAAACATCCCAGGAGAACTTGACAAAATCCTCAACAGCATGGGCTCCAGAATGGGGAGTACTGAGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 72 bp | TTGCATCCTTTTCTCCCGGTCTCCCAGGAGTGTCTCTaGGAATTGATTAAGTGTTCTGAGCTGAGTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: LHPFLPVSQECL*ELIKCSELSLE Trigger: TTCGAGACTCAGCTCAGAACACTTAATCAATTCCCAGAGACACTCCTGGGAGACCGGGAGAAAAGGATGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CCA 72 bp | GATCTCATCAGCGAAAACATCGATAGGCACGTTGGCTaGCCGCCGTATTTTCCCACCAGACTGGTAATAATA | + |
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Preference number: 6 (lower is better) Translates to: DLISENIDRHVG*PPYFPTRLVII Trigger: TATTATTACCAGTCTGGTGGGAAAATACGGCGGCCAGCCAACGTGCCTATCGATGTTTTCGCTGATGAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 90 bp | GGATCCACATACTCTCCTGGGATCTTGGAGAAGGCAGTTTCATGGTaGGTGTTGTCACTGATAAGGACTCTCCAATTGGAAAAGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: GSTYSPGILEKAVSW*VLSLIRTLQLEKGL Trigger: CAGTCCCTTTTCCAATTGGAGAGTCCTTATCAGTGACAACACCAACCATGAAACTGCCTTCTCCAAGATCCCAGGAGAGTATGTGGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 90 bp | ACATACTCTCCTGGGATCTTGGAGAAGGCAGTTTCATGGTTGGTGTaGTCACTGATAAGGACTCTCCAATTGGAAAAGGGACTGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: TYSPGILEKAVSWLV*SLIRTLQLEKGLLP Trigger: TGGTAGCAGTCCCTTTTCCAATTGGAGAGTCCTTATCAGTGACAACACCAACCATGAAACTGCCTTCTCCAAGATCCCAGGAGAGTATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 90 bp | AAATTGCATCCTTTTCTCCCGGTCTCCCAGGAGTGTCTCTGGGAATaGATTAAGTGTTCTGAGCTGAGTCTCGAATCTCAGACCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: KLHPFLPVSQECLWE*IKCSELSLESQTSN Trigger: ATTGCTGGTCTGAGATTCGAGACTCAGCTCAGAACACTTAATCAATTCCCAGAGACACTCCTGGGAGACCGGGAGAAAAGGATGCAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 72 bp | CCTGGGATCTTGGAGAAGGCAGTTTCATGGTTGGTGTaGTCACTGATAAGGACTCTCCAATTGGAAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PGILEKAVSWLV*SLIRTLQLEKG Trigger: TCCCTTTTCCAATTGGAGAGTCCTTATCAGTGACAACACCAACCATGAAACTGCCTTCTCCAAGATCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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| CDS CAA 72 bp | CCTGGCTCTTCATGGATTTCATCCGAGTTATCAAAATaGACCAGAGCAACCTCCATTTCTTTCCAGCTACAC | + |
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Preference number: 6 (lower is better) Translates to: PGSSWISSELSK*TRATSISFQLH Trigger: GTGTAGCTGGAAAGAAATGGAGGTTGCTCTGGTCAATTTTGATAACTCGGATGAAATCCATGAAGAGCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055064.8 |
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