Pregenerated sensors for KBTBD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005505Ensembl transcript IDs: ENSMUST00000090682.4, ENSMUST00000111464.8
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTaGATGGGAGCCAAGGTGCTTCTTTTTAACACTGATCTGGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: ATRLAIDKRNGPLSS*MGAKVLLFNTDLVR Trigger: TCTTACCAGATCAGTGTTAAAAAGAAGCACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR TCA 90 bp | CCACTGTCCCATCCAAAACTCTCATACTTAATTCTTTGTGGAAAGTaGCAAGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: PLSHPKLSYLILCGK*QVATRLAIDKRNGP Trigger: AGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACTTGTCACTTTCCACAAAGAATTAAGTATGAGAGTTTTGGATGGGACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGGCATCCCATGAGCCTTaGGGATGGGTTGAGGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVASHEP*GWVEAL Trigger: CAGCGCCTCAACCCATCCCCAAGGCTCATGGGATGC...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGCTAAGCAGTCTGAAGTaGGGCACAGGATCACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVLSSLK*GTGSQG Trigger: CCCCTGTGATCCTGTGCCTCACTTCAGACTGCTTAG...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGCAAGCAGCAGCAGTGTaGAAAGCCCTACACAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVQAAAV*KALHRA Trigger: TGCTCTGTGTAGGGCTTTTCACACTGCTGCTGCTTG...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATGGGCCTCTGTCTTCCTaGATGGGAGCCAAGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHGPLSS*MGAKVL Trigger: AAGCACCTTGGCTCCCATGCAGGAAGACAGAGGCCC...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACACTAAGCAGTCTGAAGTaGGGCACAGGATCACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: WLICLYKPKIQPKFLFLTLSSLK*GTGSQG Trigger: CCCCTGTGATCCTGTGCCTCACTTCAGACTGCTTAG...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATGCATGGGAGCCAAGGTaGTTCTTTTTAACACTGATC | + |
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Preference number: 2 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHAWEPR*FFLTLI Trigger: GATCAGTGTTAAAAAGAAGCACCTTGGCTCCCATGC...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR CCA 72 bp | ACAAGTAGCCACTCGGCTGGCTATAGACAAGAGGAATaGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: TSSHSAGYRQEE*ASVFLHGSQGA Trigger: AGCACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR TCA 72 bp | ACAGGGGATAATGGCAGAGTTCAAGCAGCAGCAGTGTaGAAAGCCCTACACAGAGCATCCCATGAGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: TGDNGRVQAAAV*KALHRASHEPW Trigger: CCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTGCTGCTGCTTGAACTCTGCCATTATCCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR TCA 72 bp | AAGTCTGAGAAGAGGCTGGCTCTAAGCAGTCTGAAGTaGGGCACAGGATCACAGGGGATAATGGCAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: KSEKRLALSSLK*GTGSQGIMAEF Trigger: GAACTCTGCCATTATCCCCTGTGATCCTGTGCCTCACTTCAGACTGCTTAGAGCCAGCCTCTTCTCAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| 3UTR GCA 72 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTaGATGGGAGCCAAGGTGCTTCTTTTTAACACTGAT | + |
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Preference number: 3 (lower is better) Translates to: LAIDKRNGPLSS*MGAKVLLFNTD Trigger: ATCAGTGTTAAAAAGAAGCACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGGAAGCAGCTCTGAGCTaGCAGGACCAGCCGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVEAALS*QDQPVQ Trigger: CTGCACCGGCTGGTCCTGTCAGCTCAGAGCTGCTTC...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGGGGCCAGGTGGGTCTTaGCACAGTGCTTGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVGPGGS*HSAWQQ Trigger: CTGCTGCCAAGCACTGTGCCAAGACCCACCTGGCCC...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATCGGAAGAAGCAGCTCTaGGCTGACAGGACCAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHRKKQL*ADRTSR Trigger: CCGGCTGGTCCTGTCAGCTCAGAGCTGCTTCTTCCG...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGTCACCTGCAGGCAGTTaGCCACCTGTACCGTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVSPAGS*PPVPCV Trigger: CACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGA...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGAACTCCTCTGTGCTCTaGAGCTGGGCCAGGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRNSSVL*SWARWV Trigger: GACCCACCTGGCCCAGCTGCAGAGCACAGAGGAGTT...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGTGCGTGCATGCGGCCTaGAAAGGGCAGTACGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRCVHAA*KGQYVG Trigger: CCCTACGTACTGCCCTTTGCAGGCCGCATGCACGCA...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGGCACTGCTGCGTGCATaGGGCCTGCAAAGGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRALLRA*GLQRAV Trigger: TACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTGC...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTAACTCCTCTGTGCTCTaGAGCTGGGCCAGGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCNSSVL*SWARWV Trigger: GACCCACCTGGCCCAGCTGCAGAGCACAGAGGAGTT...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTGCACTGCTGCGTGCATaGGGCCTGCAAAGGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCALLRA*GLQRAV Trigger: TACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTGC...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGTTATGCACTGCTGCGTaGATGCGGCCTGCAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRLCTAA*MRPAKG Trigger: GCCCTTTGCAGGCCGCATGCACGCAGCAGTGCATAA...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGGAAGACAGAGCCGGGTaGAGCTGTCTAGAAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVEDRAG*SCLEGD Trigger: ATCCCCTTCTAGACAGCTTCACCCGGCTCTGTCTTC...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGGACTCGCTGACATCCTaGAGCACAATCACCCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRDSLTS*STITRL Trigger: CAACCGGGTGATTGTGCTGCAGGATGTCAGCGAGTC...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGCAAGCCACATCACCTaGAGGCAGTTGCCCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHASHIT*RQLPTC Trigger: ACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGC...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTGCCACTCGGCCTGAGTaGGACCGGTCTTTGAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCATRPE*DRSLKV Trigger: TACTTTCAAAGACCGGTCTCACTCAGGCCGAGTGGC...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGACAGCCACCTCTAACTaGGTTGTCTCTGTCCACACG | + |
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Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRTATSN*VVSVHT Trigger: CGTGTGGACAGAGACAACTCAGTTAGAGGTGGCTGT...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTTCCAGGCTCCTCTGGTaGCTCCATGGTAGCCAACTT | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCSRLLW*LHGSQL Trigger: AAGTTGGCTACCATGGAGTCACCAGAGGAGCCTGGA...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTCACCTGTACCGTGCGTaGCAGAAACCGAGAACACTC | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCHLYRA*QKPRTL Trigger: GAGTGTTCTCGGTTTCTGGCACGCACGGTACAGGTG...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATCACCTGTACCGTGCGTaGCAGAAACCGAGAACACTC | + |
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Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHHLYRA*QKPRTL Trigger: GAGTGTTCTCGGTTTCTGGCACGCACGGTACAGGTG...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGAACACCAGATCCTTATaGACTGCTGCGTGCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRNTRSL*TAACMR Trigger: CCGCATGCACGCAGCAGTGCATAAGGATCTGGTGTT...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATTCTTGGCACAGTGCTTaGCAGCAGTGTAGAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHSWHSA*QQCRAR Trigger: CCGAGCTCTACACTGCTGCCAAGCACTGTGCCAAGA...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTTCTTGGCACAGTGCTTaGCAGCAGTGTAGAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCSWHSA*QQCRAR Trigger: CCGAGCTCTACACTGCTGCCAAGCACTGTGCCAAGA...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTAGATGGTGGGGCAAGTaGAGGAACTCCTCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCRWWGK*RNSSVL Trigger: GAGCACAGAGGAGTTCCTCCACTTGCCCCACCATCT...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGTCAGTGAGTAGATGGTaGGGCAAGTGGAGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVSVSRW*GKWRNS Trigger: GGAGTTCCTCCACTTGCCCCACCATCTACTCACTGA...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGGCCTCTGTTGGGTTCTaGGAACATGGAACCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVASVGF*EHGTPS Trigger: AGATGGGGTTCCATGTTCCCAGAACCCAACAGAGGC...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTTTTCCACATGCGTCGTaGGATGGACCCTCCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCFPHAS*DGPSYH Trigger: GTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAA...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATTTTCCACATGCGTCGTaGGATGGACCCTCCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHFPHAS*DGPSYH Trigger: GTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAA...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTCTAAACACAGTTTCATaGTGCCCTGAGCCACTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCLNTVS*CPEPLG Trigger: GCCGAGTGGCTCAGGGCATCATGAAACTGTGTTTAG...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGCTCTCGGCCTTCCACTaGAATGGTGACATCAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVLSAFH*NGDISK Trigger: TTTGCTGATGTCACCATTTCAGTGGAAGGCCGAGAG...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTACAATCACCCGGTTGTaGGCCTCCTTCAGGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCTITRL*ASFRLD Trigger: ATCCAACCTGAAGGAGGCTCACAACCGGGTGATTGT...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTGCTTGCAGGCTGCAGTaGTTTGGTGGCATAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCACRLQ*FGGISC Trigger: ACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGC...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGCCCCCAGTAAGTAGATaGTTCCATTCAGGTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRPPVSR*FHSGWH Trigger: GTGCCAACCTGAATGGAATCATCTACTTACTGGGGG...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR TCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGTGTGACAGTTACAGCTaGAGTGGCAGGGTCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRCDSYS*SGRVKL Trigger: AAGCTTGACCCTGCCACTTCAGCTGTAACTGTCACA...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTCAGCCAATGAGTGCGTaGGGGATGACTCTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCQPMSA*GMTLFR Trigger: TCGGAAAAGAGTCATCCCGCACGCACTCATTGGCTG...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATCAGCCAATGAGTGCGTaGGGGATGACTCTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHQPMSA*GMTLFR Trigger: TCGGAAAAGAGTCATCCCGCACGCACTCATTGGCTG...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGTGTTACATTTCCACATaGGTCGTGGGATGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRCYIST*VVGWTL Trigger: GAGGGTCCATCCCACGACGCATGTGGAAATGTAACA...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGGAAGCAGCTCTGAGCTaGCAGGACCAGCCGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKREAALS*QDQPVQ Trigger: CTGCACCGGCTGGTCCTGTCAGCTCAGAGCTGCTTC...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGCGGAAGAAGCAGCTCTaGGCTGACAGGACCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRRKKQL*ADRTSR Trigger: CCGGCTGGTCCTGTCAGCTCAGAGCTGCTTCTTCCG...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGAAAACAGACTCGCTaGCATCCTGCAGCACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHGKQTR*HPAAQS Trigger: TGATTGTGCTGCAGGATGTCAGCGAGTCTGTTTTCC...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTGTCACTGTGTCTATCTaGAAGCCACATCACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCVTVSI*KPHHLQ Trigger: CTGCAGGTGATGTGGCTTGCAGATAGACACAGTGAC...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATTGTTACATTTCCACATaGGTCGTGGGATGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHCYIST*VVGWTL Trigger: GAGGGTCCATCCCACGACGCATGTGGAAATGTAACA...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGAGTAGTTTTCATCCATaGATGCTCCAGGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCEKPYTEHPMSLGDGLRSSFHP*MLQAPL Trigger: CAGAGGAGCCTGGAGCATCCATGGATGAAAACTACT...CCTCAACCCATCCCCAAGGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGGGGCCAGGTGGGTCTTaGCACAGTGCTTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRGPGGS*HSAWQQ Trigger: CTGCTGCCAAGCACTGTGCCAAGACCCACCTGGCCC...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTTGCTGCCATTACAGCTaGCAATCTTCCAGAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCCCHYS*QSSRGM Trigger: CATCCCTCTGGAAGATTGCCAGCTGTAATGGCAGCA...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTTTTGGCCACTTACACTaGTGGAGTCATCTTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCFGHLH*WSHLLH Trigger: GTGCAGAAGATGACTCCATCAGTGTAAGTGGCCAAA...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGTGCGTGCATGCGGCCTaGAAAGGGCAGTACGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRCVHAA*KGQYVG Trigger: CCCTACGTACTGCCCTTTGCAGGCCGCATGCACGCA...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATATATCAGTGAGTAGATaGTGGGGCAAGTGGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHISVSR*WGKWRN Trigger: GTTCCTCCACTTGCCCCACCATCTACTCACTGATAT...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGTGGCATAAGCTGTTTTaGCCACTTACACTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVWHKLF*PLTLME Trigger: CTCCATCAGTGTAAGTGGCCAAAACAGCTTATGCCA...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATCAGTTACAGCTGAAGTaGCAGGGTCAAGCTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHQLQLK*QGQAYR Trigger: CCTATAAGCTTGACCCTGCCACTTCAGCTGTAACTG...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTCAGCTGATACATGTCTaGCACCTCGTAAATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCQLIHV*HLVNFL Trigger: CAGGAAATTTACGAGGTGTCAGACATGTATCAGCTG...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTTTCTATTGCCTCTGTTaGGTTCTGGGAACATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCFYCLC*VLGTWN Trigger: GTTCCATGTTCCCAGAACCCAACAGAGGCAATAGAA...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGAATCTTCCAGAGGGATaGGGCAGAGCTCCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRNLPEG*GRAPGL Trigger: GAGGCCTGGAGCTCTGCCCCATCCCTCTGGAAGATT...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATACCAGCCGGTGCAGCTaGAACTCTCGGCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHTSRCS*NSRPST Trigger: AGTGGAAGGCCGAGAGTTTCAGCTGCACCGGCTGGT...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGGAAGACAGAGCCGGGTaGAGCTGTCTAGAAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKREDRAG*SCLEGD Trigger: ATCCCCTTCTAGACAGCTTCACCCGGCTCTGTCTTC...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGAGATGGTGGGGCAAGTaGAGGAACTCCTCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRRWWGK*RNSSVL Trigger: GAGCACAGAGGAGTTCCTCCACTTGCCCCACCATCT...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CCA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATACTCCCAGTCAACAGTaGCATTGTTACATTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSAGYRQEEWASVFLHTPSQQ*HCYIST Trigger: TGTGGAAATGTAACAATGCCACTGTTGACTGGGAGT...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGGCTTGCAGGCTGCAGTaGTTTGGTGGCATAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRACRLQ*FGGISC Trigger: ACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGC...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATTTATGCACTGCTGCGTaGATGCGGCCTGCAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHLCTAA*MRPAKG Trigger: GCCCTTTGCAGGCCGCATGCACGCAGCAGTGCATAA...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGATCCTTATGCACTGCTaGGTGCATGCGGCCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRILMHC*VHAACK Trigger: TTTGCAGGCCGCATGCACGCAGCAGTGCATAAGGAT...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATCAGATCCTTATGCACTaGTGCGTGCATGCGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHQILMH*CVHAAC Trigger: GCAGGCCGCATGCACGCAGCAGTGCATAAGGATCTG...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGGCCTCTGTTGGGTTCTaGGAACATGGAACCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRASVGF*EHGTPS Trigger: AGATGGGGTTCCATGTTCCCAGAACCCAACAGAGGC...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGGTCACTGTGTCTATCTaGAAGCCACATCACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRVTVSI*KPHHLQ Trigger: CTGCAGGTGATGTGGCTTGCAGATAGACACAGTGAC...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGGATGGAGTCATCTTCTaGACAGTGCAAGGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRDGVIF*TVQGHS Trigger: GCTGTGTCCTTGCACTGTGCAGAAGATGACTCCATC...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAACCAGCCGGTGCAGCTaGAACTCTCGGCCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTTSRCS*NSRPST Trigger: AGTGGAAGGCCGAGAGTTTCAGCTGCACCGGCTGGT...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGAAGAGAGATGTCAGCTaGTACATGTCTGACACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRKRDVS*YMSDTS Trigger: CGAGGTGTCAGACATGTATCAGCTGACATCTCTCTT...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATACAGCCACCTCTAACTaGGTTGTCTCTGTCCACACG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHTATSN*VVSVHT Trigger: CGTGTGGACAGAGACAACTCAGTTAGAGGTGGCTGT...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGGATCCAAGCTTCTATTaGCTCTGTTGGGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRDPSFY*LCWVLG Trigger: TCCCAGAACCCAACAGAGGCAATAGAAGCTTGGATC...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATAACACCAGATCCTTATaGACTGCTGCGTGCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHNTRSL*TAACMR Trigger: CCGCATGCACGCAGCAGTGCATAAGGATCTGGTGTT...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATCTCTCGGCCTTCCACTaGAATGGTGACATCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHLSAFH*NGDISK Trigger: TTTGCTGATGTCACCATTTCAGTGGAAGGCCGAGAG...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATGGAAAACAGACTCGCTaGCATCCTGCAGCACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHGKQTR*HPAAQS Trigger: TGATTGTGCTGCAGGATGTCAGCGAGTCTGTTTTCC...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATCCCCCAGTAAGTAGATaGTTCCATTCAGGTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHPPVSR*FHSGWH Trigger: GTGCCAACCTGAATGGAATCATCTACTTACTGGGGG...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAGCAAGCCACATCACCTaGAGGCAGTTGCCCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTASHIT*RQLPTC Trigger: ACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGC...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATGACACAGCCAATGAGTaGGTGCGGGATGACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHDTANE*VRDDSF Trigger: AAAAGAGTCATCCCGCACGCACTCATTGGCTGTGTC...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACACAGATCCTTATGCACTaGTGCGTGCATGCGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTQILMH*CVHAAC Trigger: GCAGGCCGCATGCACGCAGCAGTGCATAAGGATCTG...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGTGGCATAAGCTGTTTTaGCCACTTACACTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRWHKLF*PLTLME Trigger: CTCCATCAGTGTAAGTGGCCAAAACAGCTTATGCCA...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAAATCTTCCAGAGGGATaGGGCAGAGCTCCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTNLPEG*GRAPGL Trigger: GAGGCCTGGAGCTCTGCCCCATCCCTCTGGAAGATT...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATTGCTGCCATTACAGCTaGCAATCTTCCAGAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHCCHYS*QSSRGM Trigger: CATCCCTCTGGAAGATTGCCAGCTGTAATGGCAGCA...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAGCCACTCGGCCTGAGTaGGACCGGTCTTTGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTATRPE*DRSLKV Trigger: TACTTTCAAAGACCGGTCTCACTCAGGCCGAGTGGC...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATTTTGGCCACTTACACTaGTGGAGTCATCTTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHFGHLH*WSHLLH Trigger: GTGCAGAAGATGACTCCATCAGTGTAAGTGGCCAAA...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAGACTCGCTGACATCCTaGAGCACAATCACCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTDSLTS*STITRL Trigger: CAACCGGGTGATTGTGCTGCAGGATGTCAGCGAGTC...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATTCATCTTCTGCACAGTaGAAGGACACAGCCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHSSSAQ*KDTANE Trigger: CTCATTGGCTGTGTCCTTGCACTGTGCAGAAGATGA...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGACTCCCAGTCAACAGTaGCATTGTTACATTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLFNTDLVREAVPKSEKRTPSQQ*HCYIST Trigger: TGTGGAAATGTAACAATGCCACTGTTGACTGGGAGT...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATCAGTTACAGCTGAAGTaGCAGGGTCAAGCTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHQLQLK*QGQAYR Trigger: CCTATAAGCTTGACCCTGCCACTTCAGCTGTAACTG...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAACAATCACCCGGTTGTaGGCCTCCTTCAGGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTTITRL*ASFRLD Trigger: ATCCAACCTGAAGGAGGCTCACAACCGGGTGATTGT...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATCAGCTGATACATGTCTaGCACCTCGTAAATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHQLIHV*HLVNFL Trigger: CAGGAAATTTACGAGGTGTCAGACATGTATCAGCTG...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAATCCTTATGCACTGCTaGGTGCATGCGGCCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTILMHC*VHAACK Trigger: TTTGCAGGCCGCATGCACGCAGCAGTGCATAAGGAT...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACATCAGTGAGTAGATGGTaGGGCAAGTGGAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTSVSRW*GKWRNS Trigger: GGAGTTCCTCCACTTGCCCCACCATCTACTCACTGA...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATTTCTATTGCCTCTGTTaGGTTCTGGGAACATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHFYCLC*VLGTWN Trigger: GTTCCATGTTCCCAGAACCCAACAGAGGCAATAGAA...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACATGTGACAGTTACAGCTaGAGTGGCAGGGTCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTCDSYS*SGRVKL Trigger: AAGCTTGACCCTGCCACTTCAGCTGTAACTGTCACA...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAGACACAGCCAATGAGTaGGTGCGGGATGACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTDTANE*VRDDSF Trigger: AAAAGAGTCATCCCGCACGCACTCATTGGCTGTGTC...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAGATGGAGTCATCTTCTaGACAGTGCAAGGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTDGVIF*TVQGHS Trigger: GCTGTGTCCTTGCACTGTGCAGAAGATGACTCCATC...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATAGTGAGACCGGTCTTTaGAAGTATAGTTCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHSETGL*KYSSQS Trigger: ACTTTGTGAACTATACTTTCAAAGACCGGTCTCACT...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR GCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAGATCCAAGCTTCTATTaGCTCTGTTGGGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTDPSFY*LCWVLG Trigger: TCCCAGAACCCAACAGAGGCAATAGAAGCTTGGATC...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACATCATCTTCTGCACAGTaGAAGGACACAGCCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTSSSAQ*KDTANE Trigger: CTCATTGGCTGTGTCCTTGCACTGTGCAGAAGATGA...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAATATCAGTGAGTAGATaGTGGGGCAAGTGGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTISVSR*WGKWRN Trigger: GTTCCTCCACTTGCCCCACCATCTACTCACTGATAT...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTATCTGTTTGTATAAGCCAAAAATCCAACCAAAGTTTCTTTTCCTGACAAGTGAGACCGGTCTTTaGAAGTATAGTTCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLICLYKPKIQPKFLFLTSETGL*KYSSQS Trigger: ACTTTGTGAACTATACTTTCAAAGACCGGTCTCACT...TGTCAGGAAAAGAAACTTTGGTTGGATTTTTGGCTTATACAAACAGATAAGCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS GCA 90 bp | TCAGTGAGTAGATGGTGGGGCAAGTGGAGGAACTCCTCTGTGCTCTaGAGCTGGGCCAGGTGGGTCTTGGCACAGTGCTTGGCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRWWGKWRNSSVL*SWARWVLAQCLAAV Trigger: CACTGCTGCCAAGCACTGTGCCAAGACCCACCTGGCCCAGCTGCAGAGCACAGAGGAGTTCCTCCACTTGCCCCACCATCTACTCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS CCA 90 bp | GGAGGCGGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTaGCATTGTTACATTTCCACATGCGTCGTGGGATGGACCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: GGGRGAKEHTTPSQQ*HCYISTCVVGWTLL Trigger: TAGGAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTTGACTGGGAGTGGTGTGCTCCTTTGCCCCGCGACCGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS GCA 90 bp | CGGGGTCACTGTGTCTATCTGCAAGCCACATCACCTGCAGGCAGTTaGCCACCTGTACCGTGCGTGCCAGAAACCGAGAACACTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RGHCVYLQATSPAGS*PPVPCVPETENTPQ Trigger: TTGAGGAGTGTTCTCGGTTTCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGCAGATAGACACAGTGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CAA 90 bp | GGGGATACACCACAAGGGGAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTTGGGCCAGGTGGGTCTaGGCACAGTGCTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GDTPQGEGKGVSCSSHHCWARWV*AQCLAA Trigger: TGCTGCCAAGCACTGTGCCAAGACCCACCTGGCCCA...ACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTCCCCTTGTGGTGTATCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS TCA 90 bp | CCTGCAGCACAATCACCCGGTTGTGAGCCTCCTTCAGGTTGGATGTaGACATGGATCGGAAGAAGCAGCTCTGAGCTGACAGGACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAAQSPGCEPPSGWM*TWIGRSSSELTGPA Trigger: GGCTGGTCCTGTCAGCTCAGAGCTGCTTCTTCCGATCCATGTTCACATCCAACCTGAAGGAGGCTCACAACCGGGTGATTGTGCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 90 bp | AGAGTCCCCCTCAGCCACAATAAACACCAGATCCTTATGCACTGCTaGGTGCATGCGGCCTGCAAAGGGCAGTACGTAGGGCTTCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVPLSHNKHQILMHC*VHAACKGQYVGLHV Trigger: CACGTGAAGCCCTACGTACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTGCATAAGGATCTGGTGTTTATTGTGGCTGAGGGGGACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS CCA 90 bp | CCCAGTCAACAGTGGCATTGTTACATTTCCACATGCGTCGTGGGATaGACCCTCCTACCACATACAGGTCGCCACCATGCTTGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSQQWHCYISTCVVG*TLLPHTGRHHACRL Trigger: CAGCCTGCAAGCATGGTGGCGACCTGTATGTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTTGACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 90 bp | TGCAAGCCACATCACCTGCAGGCAGTTGCCCACCTGTACCGTGCGTaGCAGAAACCGAGAACACTCCTCAAAGAGAGATGTCAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: CKPHHLQAVAHLYRA*QKPRTLLKERCQLI Trigger: TATCAGCTGACATCTCTCTTTGAGGAGTGTTCTCGGTTTCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS GCA 90 bp | TATCTGCAAGCCACATCACCTGCAGGCAGTTGCCCACCTGTACCGTaGGTGCCAGAAACCGAGAACACTCCTCAAAGAGAGATGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YLQATSPAGSCPPVP*VPETENTPQREMSA Trigger: AGCTGACATCTCTCTTTGAGGAGTGTTCTCGGTTTCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGCAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS GCA 90 bp | GAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATaGGTCGTGGGATGGACCCTCCTACCACATACAGGTCGCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: EHTTPSQQWHCYIST*VVGWTLLPHTGRHH Trigger: ATGGTGGCGACCTGTATGTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTTGACTGGGAGTGGTGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS CCA 90 bp | CCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATGCGTCGTaGGATGGACCCTCCTACCACATACAGGTCGCCACCATGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLPVNSGIVTFPHAS*DGPSYHIQVATMLA Trigger: TGCAAGCATGGTGGCGACCTGTATGTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTTGACTGGGAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS CCA 90 bp | CATTCGAGAGGGTATCCTGTAGTGTCTTGCCGCCCAGGGAATATATaGCATCTTTCCCAGGCACAGATACTAGGGTGTGCTGGAGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSRGYPVVSCRPGNI*HLSQAQILGCAGGG Trigger: ACCGCCTCCAGCACACCCTAGTATCTGTGCCTGGGAAAGATGCCATATATTCCCTGGGCGGCAAGACACTACAGGATACCCTCTCGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS GCA 90 bp | CACAATAAACACCAGATCCTTATGCACTGCTGCGTGCATGCGGCCTaGAAAGGGCAGTACGTAGGGCTTCACGTGGCACTTGTCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HNKHQILMHCCVHAA*KGQYVGLHVALVSF Trigger: GAAACTGACAAGTGCCACGTGAAGCCCTACGTACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTGCATAAGGATCTGGTGTTTATTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGAGCCAACTTCTCTCTTaGCCAACTATCTGCGATACC | + |
|
Preference number: 5 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVSQLLS*PTICDT Trigger: GGTATCGCAGATAGTTGGCAAAGAGAGAAGTTGGCT...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111464.8 |
||
| CDS GCA 90 bp | TGGAGTCATCTTCTGCACAGTGCAAGGACACAGCCAATGAGTGCGTaGGGGATGACTCTTTTCCGATCAGGTAAATGTGCACATTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WSHLLHSARTQPMSA*GMTLFRSGKCAHSP Trigger: GGGAGAATGTGCACATTTACCTGATCGGAAAAGAGTCATCCCGCACGCACTCATTGGCTGTGTCCTTGCACTGTGCAGAAGATGACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS GCA 90 bp | AAGCTGTTTTGGCCACTTACACTGATGGAGTCATCTTCTGCACAGTaGAAGGACACAGCCAATGAGTGCGTGCGGGATGACTCTTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KLFWPLTLMESSSAQ*KDTANECVRDDSFP Trigger: CGGAAAAGAGTCATCCCGCACGCACTCATTGGCTGTGTCCTTGCACTGTGCAGAAGATGACTCCATCAGTGTAAGTGGCCAAAACAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS CCA 90 bp | CCTACCACATACAGGTCGCCACCATGCTTGCAGGCTGCAGTGATTTaGTGGCATAAGCTGTTTTGGCCACTTACACTGATGGAGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PTTYRSPPCLQAAVI*WHKLFWPLTLMESS Trigger: AGATGACTCCATCAGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATGGTGGCGACCTGTATGTGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS TCA 90 bp | TCCCATGGTATATATAGTCAACTAGGAGCTGGAAAACAGACTCGCTaGCATCCTGCAGCACAATCACCCGGTTGTGAGCCTCCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHGIYSQLGAGKQTR*HPAAQSPGCEPPSG Trigger: ACCTGAAGGAGGCTCACAACCGGGTGATTGTGCTGCAGGATGTCAGCGAGTCTGTTTTCCAGCTCCTAGTTGACTATATATACCATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS CCA 90 bp | ACCACATACAGGTCGCCACCATGCTTGCAGGCTGCAGTGATTTGGTaGCATAAGCTGTTTTGGCCACTTACACTGATGGAGTCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TTYRSPPCLQAAVIW*HKLFWPLTLMESSS Trigger: AGAAGATGACTCCATCAGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATGGTGGCGACCTGTATGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTCTCATTGGGCCAGGTGGGTCTaGGCACAGTGCTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLVKYIFSLVHCPIQNSHWARWV*AQCLAA Trigger: TGCTGCCAAGCACTGTGCCAAGACCCACCTGGCCCA...ATGAGAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCCACTCGGCTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATCAGTCAACAGTGGCATaGTTACATTTCCACATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSHSAGYRQEEWASVFLHQSTVA*LHFHMR Trigger: ACGCATGTGGAAATGTAACAATGCCACTGTTGACTG...ATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTGGCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS TCA 90 bp | CAAGTTGGTAAGCAGCACCTTAATGCCTCTTGTGACAGTTACAGCTaGAGTGGCAGGGTCAAGCTTATAGGTGTTGGCATCACCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVGKQHLNASCDSYS*SGRVKLIGVGITLL Trigger: AAGAAGGGTGATGCCAACACCTATAAGCTTGACCCTGCCACTTCAGCTGTAACTGTCACAAGAGGCATTAAGGTGCTGCTTACCAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
||
| CDS TCA 90 bp | GTTCACAAAGTAGTTTTCATCCATGGATGCTCCAGGCTCCTCTGGTaGCTCCATGGTAGCCAACTTCTCTCTTTGCCAACTATCTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VHKVVFIHGCSRLLW*LHGSQLLSLPTICD Trigger: ATCGCAGATAGTTGGCAAAGAGAGAAGTTGGCTACCATGGAGTCACCAGAGGAGCCTGGAGCATCCATGGATGAAAACTACTTTGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111464.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGTCCTCTTTATTGAAATaGATCCAAGCTTCTATTGCC | + |
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Preference number: 5 (lower is better) Translates to: LAIDKRNGPLSSCMGAKVSSLLK*IQASIA Trigger: GGCAATAGAAGCTTGGATCAATTTCAATAAAGAGGA...CACCTTGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS TCA 90 bp | AAACCGAGAACACTCCTCAAAGAGAGATGTCAGCTGATACATGTCTaGCACCTCGTAAATTTCCTGCAGCTCATCAGCTCGAAGTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: KPRTLLKERCQLIHV*HLVNFLQLISSKFH Trigger: GTGAAACTTCGAGCTGATGAGCTGCAGGAAATTTACGAGGTGTCAGACATGTATCAGCTGACATCTCTCTTTGAGGAGTGTTCTCGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CCA 90 bp | TCTTTATTGAAATTGATCCAAGCTTCTATTGCCTCTGTTGGGTTCTaGGAACATGGAACCCCATCTGAGATGATATCAGTGAGTAGATGG | + |
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Preference number: 5 (lower is better) Translates to: SLLKLIQASIASVGF*EHGTPSEMISVSRW Trigger: CCATCTACTCACTGATATCATCTCAGATGGGGTTCCATGTTCCCAGAACCCAACAGAGGCAATAGAAGCTTGGATCAATTTCAATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS-3UTR CAA 90 bp | CTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGTCCTCTTTATTGAAATaGATCCAAGCTTCTATTGCC | + |
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Preference number: 5 (lower is better) Translates to: LLFNTDLVREAVPKSEKRSSLLK*IQASIA Trigger: GGCAATAGAAGCTTGGATCAATTTCAATAAAGAGGA...CCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | AGATGGTGGGGCAAGTGGAGGAACTCCTCTGTGCTCTaGAGCTGGGCCAGGTGGGTCTTGGCACAGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RWWGKWRNSSVL*SWARWVLAQCL Trigger: CAAGCACTGTGCCAAGACCCACCTGGCCCAGCTGCAGAGCACAGAGGAGTTCCTCCACTTGCCCCACCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CCA 72 bp | ATGGCATCTTTCCCAGGCACAGATACTAGGGTGTGCTaGAGGCGGTCGCGGGGCAAAGGAGCACACCACTCC | + |
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Preference number: 6 (lower is better) Translates to: MASFPGTDTRVC*RRSRGKGAHHS Trigger: GGAGTGGTGTGCTCCTTTGCCCCGCGACCGCCTCCAGCACACCCTAGTATCTGTGCCTGGGAAAGATGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | TCGGGGTCACTGTGTCTATCTGCAAGCCACATCACCTaGAGGCAGTTGCCCACCTGTACCGTGCGTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGSLCLSASHIT*RQLPTCTVRAR Trigger: TCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGCAGATAGACACAGTGACCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CAA 90 bp | TCGGGGTCACTGTGTCTATCTGCAAGCCACATCACCTGCAGGCAGTaGCCCACCTGTACCGTGCGTGCCAGAAACCGAGAACACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGSLCLSASHITCRQ*PTCTVRARNREHSS Trigger: TGAGGAGTGTTCTCGGTTTCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGCAGATAGACACAGTGACCCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CAA 90 bp | CGGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTGGCATaGTTACATTTCCACATGCGTCGTGGGATGGACCCTCCTACCACA | + |
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Preference number: 6 (lower is better) Translates to: RSRGKGAHHSQSTVA*LHFHMRRGMDPPTT Trigger: TGTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTTGACTGGGAGTGGTGTGCTCCTTTGCCCCGCGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | GCCACATCACCTGCAGGCAGTTGCCCACCTGTACCGTaGGTGCCAGAAACCGAGAACACTCCTCAAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: ATSPAGSCPPVP*VPETENTPQRE Trigger: CTCTCTTTGAGGAGTGTTCTCGGTTTCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | TATATGGCATCTTTCCCAGGCACAGATACTAGGGTGTaGTGGAGGCGGTCGCGGGGCAAAGGAGCACACCAC | + |
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Preference number: 6 (lower is better) Translates to: YMASFPGTDTRV*WRRSRGKGAHH Trigger: GTGGTGTGCTCCTTTGCCCCGCGACCGCCTCCAGCACACCCTAGTATCTGTGCCTGGGAAAGATGCCATATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | CACCAGATCCTTATGCACTGCTGCGTGCATGCGGCCTaGAAAGGGCAGTACGTAGGGCTTCACGTGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: HQILMHCCVHAA*KGQYVGLHVAL Trigger: AAGTGCCACGTGAAGCCCTACGTACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTGCATAAGGATCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | TGTGTCTATCTGCAAGCCACATCACCTGCAGGCAGTTaGCCACCTGTACCGTGCGTGCCAGAAACCGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: CVYLQATSPAGS*PPVPCVPETEN Trigger: GTTCTCGGTTTCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGCAGATAGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | GAGTCCCCCTCAGCCACAATAAACACCAGATCCTTATaGACTGCTGCGTGCATGCGGCCTGCAAAGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: ESPSATINTRSL*TAACMRPAKGS Trigger: ACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTGCATAAGGATCTGGTGTTTATTGTGGCTGAGGGGGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CAA 72 bp | CTGTGTCTATCTGCAAGCCACATCACCTGCAGGCAGTaGCCCACCTGTACCGTGCGTGCCAGAAACCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LCLSASHITCRQ*PTCTVRARNRE Trigger: TTCTCGGTTTCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATGTGGCTTGCAGATAGACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CAA 90 bp | CGTCGTGGGATGGACCCTCCTACCACATACAGGTCGCCACCATGCTaGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: RRGMDPPTTYRSPPC*QAAVIWWHKLFWPL Trigger: AAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATGGTGGCGACCTGTATGTGGTAGGAGGGTCCATCCCACGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS TCA 72 bp | GACTCGCTGACATCCTGCAGCACAATCACCCGGTTGTaGGCCTCCTTCAGGTTGGATGTGAACATGGATCGG | + |
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Preference number: 6 (lower is better) Translates to: DSLTSCSTITRL*ASFRLDVNMDR Trigger: CCGATCCATGTTCACATCCAACCTGAAGGAGGCTCACAACCGGGTGATTGTGCTGCAGGATGTCAGCGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | CATCACCTGCAGGCAGTTGCCCACCTGTACCGTGCGTaGCAGAAACCGAGAACACTCCTCAAAGAGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: HHLQAVAHLYRA*QKPRTLLKERC Trigger: ACATCTCTCTTTGAGGAGTGTTCTCGGTTTCTGGCACGCACGGTACAGGTGGGCAACTGCCTGCAGGTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | CTCAGCCACAATAAACACCAGATCCTTATGCACTGCTaGGTGCATGCGGCCTGCAAAGGGCAGTACGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: LSHNKHQILMHC*VHAACKGQYVG Trigger: CCCTACGTACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTGCATAAGGATCTGGTGTTTATTGTGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | CCCCTCAGCCACAATAAACACCAGATCCTTATGCACTaGTGCGTGCATGCGGCCTGCAAAGGGCAGTACGTA | + |
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Preference number: 6 (lower is better) Translates to: PLSHNKHQILMH*CVHAACKGQYV Trigger: TACGTACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTGCATAAGGATCTGGTGTTTATTGTGGCTGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | TGGCCACTTACACTGATGGAGTCATCTTCTGCACAGTaGAAGGACACAGCCAATGAGTGCGTGCGGGATGAC | + |
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Preference number: 6 (lower is better) Translates to: WPLTLMESSSAQ*KDTANECVRDD Trigger: GTCATCCCGCACGCACTCATTGGCTGTGTCCTTGCACTGTGCAGAAGATGACTCCATCAGTGTAAGTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CCA 72 bp | CAGTGGCATTGTTACATTTCCACATGCGTCGTGGGATaGACCCTCCTACCACATACAGGTCGCCACCATGCT | + |
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Preference number: 6 (lower is better) Translates to: QWHCYISTCVVG*TLLPHTGRHHA Trigger: AGCATGGTGGCGACCTGTATGTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CCA 72 bp | GTCAACAGTGGCATTGTTACATTTCCACATGCGTCGTaGGATGGACCCTCCTACCACATACAGGTCGCCACC | + |
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Preference number: 6 (lower is better) Translates to: VNSGIVTFPHAS*DGPSYHIQVAT Trigger: GGTGGCGACCTGTATGTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS TCA 72 bp | CAATCACCCGGTTGTGAGCCTCCTTCAGGTTGGATGTaGACATGGATCGGAAGAAGCAGCTCTGAGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: QSPGCEPPSGWM*TWIGRSSSELT Trigger: TGTCAGCTCAGAGCTGCTTCTTCCGATCCATGTTCACATCCAACCTGAAGGAGGCTCACAACCGGGTGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CCA 72 bp | GGGTATCCTGTAGTGTCTTGCCGCCCAGGGAATATATaGCATCTTTCCCAGGCACAGATACTAGGGTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GYPVVSCRPGNI*HLSQAQILGCA Trigger: AGCACACCCTAGTATCTGTGCCTGGGAAAGATGCCATATATTCCCTGGGCGGCAAGACACTACAGGATACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CAA 72 bp | ATGGACCCTCCTACCACATACAGGTCGCCACCATGCTaGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: MDPPTTYRSPPC*QAAVIWWHKLF Trigger: AAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATGGTGGCGACCTGTATGTGGTAGGAGGGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | CTTCTGCACAGTGCAAGGACACAGCCAATGAGTGCGTaGGGGATGACTCTTTTCCGATCAGGTAAATGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLHSARTQPMSA*GMTLFRSGKCA Trigger: TGCACATTTACCTGATCGGAAAAGAGTCATCCCGCACGCACTCATTGGCTGTGTCCTTGCACTGTGCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | ACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATaGGTCGTGGGATGGACCCTCCTACCACATACAGGT | + |
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Preference number: 6 (lower is better) Translates to: TPSQQWHCYIST*VVGWTLLPHTG Trigger: ACCTGTATGTGGTAGGAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTTGACTGGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS TCA 72 bp | GTAGTTTTCATCCATGGATGCTCCAGGCTCCTCTGGTaGCTCCATGGTAGCCAACTTCTCTCTTTGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: VVFIHGCSRLLW*LHGSQLLSLPT Trigger: AGTTGGCAAAGAGAGAAGTTGGCTACCATGGAGTCACCAGAGGAGCCTGGAGCATCCATGGATGAAAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111464.8 |
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| CDS TCA 72 bp | ATATATAGTCAACTAGGAGCTGGAAAACAGACTCGCTaGCATCCTGCAGCACAATCACCCGGTTGTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: IYSQLGAGKQTR*HPAAQSPGCEP Trigger: AGGCTCACAACCGGGTGATTGTGCTGCAGGATGTCAGCGAGTCTGTTTTCCAGCTCCTAGTTGACTATATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS TCA 72 bp | AAGCAGCACCTTAATGCCTCTTGTGACAGTTACAGCTaGAGTGGCAGGGTCAAGCTTATAGGTGTTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: KQHLNASCDSYS*SGRVKLIGVGI Trigger: GATGCCAACACCTATAAGCTTGACCCTGCCACTTCAGCTGTAACTGTCACAAGAGGCATTAAGGTGCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS CCA 72 bp | TTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTaGCCACTTACACTGATGGAGTCATCTTCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: LQAAVIWWHKLF*PLTLMESSSAQ Trigger: CTGTGCAGAAGATGACTCCATCAGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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| CDS GCA 72 bp | TCTTTCCTCTTTATTGAAATTGATCCAAGCTTCTATTaGCTCTGTTGGGTTCTGGGAACATGGAACCCCATC | + |
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Preference number: 6 (lower is better) Translates to: SFLFIEIDPSFY*LCWVLGTWNPI Trigger: GATGGGGTTCCATGTTCCCAGAACCCAACAGAGGCAATAGAAGCTTGGATCAATTTCAATAAAGAGGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090682.4 ENSMUST00000111464.8 |
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