Pregenerated sensors for KBTBD3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025893

Ensembl transcript IDs: ENSMUST00000049648.9, ENSMUST00000212221.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TGGACAGTAGCACCAGGTCTGGTCAGTGGCATCATGGTAAGACTGTaGAATATGAAGTCGAATCCTTCTACAGCACTTCCCTTTGCAACC	+
Preference number: 5 (lower is better) Translates to: WTVAPGLVSGIMVRL*NMKSNPSTALPFAT Trigger: GGTTGCAAAGGGAAGTGCTGTAGAAGGATTCGACTTCATATTGCACAGTCTTACCATGATGCCACTGACCAGACCTGGTGCTACTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS TCA 90 bp	TATACAACAAATGAAAGTGATGCTGCACAAAATATAAAGTGTGACTaGACAACTGGGCAGAGCCGTAGCTGTCTGACAGAGATAACAAAT	+
Preference number: 5 (lower is better) Translates to: YTTNESDAAQNIKCD*TTGQSRSCLTEITN Trigger: ATTTGTTATCTCTGTCAGACAGCTACGGCTCTGCCCAGTTGTTCAGTCACACTTTATATTTTGTGCAGCATCACTTTCATTTGTTGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS GCA 90 bp	TATGTAAATCTTATCCTCAATTCCAATTGCACCTGCATTAAAACCTaGACACTCAAAAGACCCTTCTCCTTTCCAAACACAAGTATCAGG	+
Preference number: 5 (lower is better) Translates to: YVNLILNSNCTCIKT*TLKRPFSFPNTSIR Trigger: CCTGATACTTGTGTTTGGAAAGGAGAAGGGTCTTTTGAGTGTGCAGGTTTTAATGCAGGTGCAATTGGAATTGAGGATAAGATTTACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS CCA 90 bp	ATTTTCCTCAGTCTTATGGATGAATATATATTTTTCAGTTGTGGATaGTCGAGCATCAGGAAAGAGGCCACTAGAACCTTGTACACACTT	+
Preference number: 5 (lower is better) Translates to: IFLSLMDEYIFFSCG*SSIRKEATRTLYTL Trigger: AAGTGTGTACAAGGTTCTAGTGGCCTCTTTCCTGATGCTCGACCATCCACAACTGAAAAATATATATTCATCCATAAGACTGAGGAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS GCA 90 bp	ATCATCTGTTATTCTTGTTTTTCCCGTATAGGCATAGTCAAGAAATaGCTTTACAGCTTTGGAGGACAAGTTAGTAATGGTAACACTTCC	+
Preference number: 5 (lower is better) Translates to: IICYSCFSRIGIVKK*LYSFGGQVSNGNTS Trigger: GGAAGTGTTACCATTACTAACTTGTCCTCCAAAGCTGTAAAGGCATTTCTTGACTATGCCTATACGGGAAAAACAAGAATAACAGATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS GCA 72 bp	GCACCAGGTCTGGTCAGTGGCATCATGGTAAGACTGTaGAATATGAAGTCGAATCCTTCTACAGCACTTCCC	+
Preference number: 6 (lower is better) Translates to: APGLVSGIMVRL*NMKSNPSTALP Trigger: GGGAAGTGCTGTAGAAGGATTCGACTTCATATTGCACAGTCTTACCATGATGCCACTGACCAGACCTGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS CAA 72 bp	GGATGGTCGAGCATCAGGAAAGAGGCCACTAGAACCTaGTACACACTTAATGGCATCCACGATTATGTCAAA	+
Preference number: 6 (lower is better) Translates to: GWSSIRKEATRT*YTLNGIHDYVK Trigger: TTTGACATAATCGTGGATGCCATTAAGTGTGTACAAGGTTCTAGTGGCCTCTTTCCTGATGCTCGACCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS TCA 72 bp	AATGAAAGTGATGCTGCACAAAATATAAAGTGTGACTaGACAACTGGGCAGAGCCGTAGCTGTCTGACAGAG	+
Preference number: 6 (lower is better) Translates to: NESDAAQNIKCD*TTGQSRSCLTE Trigger: CTCTGTCAGACAGCTACGGCTCTGCCCAGTTGTTCAGTCACACTTTATATTTTGTGCAGCATCACTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS CAA 90 bp	TTCAGTTGTGGATGGTCGAGCATCAGGAAAGAGGCCACTAGAACCTaGTACACACTTAATGGCATCCACGATTATGTCAAAACAGTTTGT	+
Preference number: 6 (lower is better) Translates to: FSCGWSSIRKEATRT*YTLNGIHDYVKTVC Trigger: ACAAACTGTTTTGACATAATCGTGGATGCCATTAAGTGTGTACAAGGTTCTAGTGGCCTCTTTCCTGATGCTCGACCATCCACAACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS TCA 72 bp	GCAAGCTTTGGACAGGAAGGAAACCTGAAGAAAGGATaGCAACTGGAAGAACATTTCCACGTTATCATCTGT	+
Preference number: 6 (lower is better) Translates to: ASFGQEGNLKKG*QLEEHFHVIIC Trigger: ACAGATGATAACGTGGAAATGTTCTTCCAGTTGTCATCCTTTCTTCAGGTTTCCTTCCTGTCCAAAGCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS CAA 72 bp	GACCCTCTAGTTTTTCCGCCTATAACAAATAATCGATaGAGAGCCATGACTGATGTATGCATGGTTCTTGGG	+
Preference number: 6 (lower is better) Translates to: DPLVFPPITNNR*RAMTDVCMVLG Trigger: CCCAAGAACCATGCATACATCAGTCATGGCTCTCAATCGATTATTTGTTATAGGCGGAAAAACTAGAGGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS TCA 72 bp	GTGCAGTTTACTGGGACAGCTTTAATTAAAGTAGCGTaGAAAAACTGCCCAAACTCTGCTACTAGTTCAGAC	+
Preference number: 6 (lower is better) Translates to: VQFTGTALIKVA*KNCPNSATSSD Trigger: GTCTGAACTAGTAGCAGAGTTTGGGCAGTTTTTTCACGCTACTTTAATTAAAGCTGTCCCAGTAAACTGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS GCA 72 bp	CTTATCCTCAATTCCAATTGCACCTGCATTAAAACCTaGACACTCAAAAGACCCTTCTCCTTTCCAAACACA	+
Preference number: 6 (lower is better) Translates to: LILNSNCTCIKT*TLKRPFSFPNT Trigger: TGTGTTTGGAAAGGAGAAGGGTCTTTTGAGTGTGCAGGTTTTAATGCAGGTGCAATTGGAATTGAGGATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS GCA 72 bp	ATAACAAATAATCGATTGAGAGCCATGACTGATGTATaGATGGTTCTTGGGGTTTTCATGGCTGAAACACAG	+
Preference number: 6 (lower is better) Translates to: ITNNRLRAMTDV*MVLGVFMAETQ Trigger: CTGTGTTTCAGCCATGAAAACCCCAAGAACCATGCATACATCAGTCATGGCTCTCAATCGATTATTTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS GCA 72 bp	TATTCTTGTTTTTCCCGTATAGGCATAGTCAAGAAATaGCTTTACAGCTTTGGAGGACAAGTTAGTAATGGT	+
Preference number: 6 (lower is better) Translates to: YSCFSRIGIVKK*LYSFGGQVSNG Trigger: ACCATTACTAACTTGTCCTCCAAAGCTGTAAAGGCATTTCTTGACTATGCCTATACGGGAAAAACAAGAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2
CDS CCA 72 bp	CACAAGTATCAGGACAAAAACTATAAACCTTATAGGTaGAAAGATCACATATATAAAGGGTGCAGTTTACTG	+
Preference number: 6 (lower is better) Translates to: HKYQDKNYKPYR*KDHIYKGCSLL Trigger: CAGTAAACTGCACCCTTTATATATGTGATCTTTCCACCTATAAGGTTTATAGTTTTTGTCCTGATACTTGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049648.9 ENSMUST00000212221.2