RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KBTBD12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033182

Ensembl transcript IDs: ENSMUST00000120933.5, ENSMUST00000184878.7

Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCCAGCACTGAAAGTGAGCCCCAGAGCCAGTGAGCCTGGACTCTaGGTTCTGGATGCAGAAGGGACTTCACGGCAGGCGTCTGAGACC +
Preference number: 1 (lower is better)
Translates to: APALKVSPRASEPGL*VLDAEGTSRQASET
Trigger: GGTCTCAGACGCCTGCCGTGAAGTCCCTTCTGCATCCAGAACCCAGAGTCCAGGCTCACTGGCTCTGGGGCTCACTTTCAGTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 90 bp TTGGATGTACCTGTCGGGAATAAGCCTGGGACTACTCCCAGTTCCTaGCTCCCCTCTGGTGCTGAGGCAGTTCTGTGTCCGCTCCAGGGA +
Preference number: 1 (lower is better)
Translates to: LDVPVGNKPGTTPSS*LPSGAEAVLCPLQG
Trigger: TCCCTGGAGCGGACACAGAACTGCCTCAGCACCAGAGGGGAGGCAGGAACTGGGAGTAGTCCCAGGCTTATTCCCGACAGGTACATCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 90 bp GGGTACATCTGTGCAGGGACAGGGGGCAGAACACCTTGGTGTCAGTaGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTT +
Preference number: 1 (lower is better)
Translates to: GYICAGTGGRTPWCQ*LWFDRVLLSCEGEV
Trigger: AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCCTGCACAGATGTACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 90 bp GTAGCTTCTAAGATGCCCAGGTGGGTGAACAGGAAGAGATTCTGGTaGGGACTCAGGGGAGCAGCGACCCTCCCTATAGAGCTTCTGCCT +
Preference number: 1 (lower is better)
Translates to: VASKMPRWVNRKRFW*GLRGAATLPIELLP
Trigger: AGGCAGAAGCTCTATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCTGGGCATCTTAGAAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 90 bp GGGTTCTGGATGCAGAAGGGACTTCACGGCAGGCGTCTGAGACCTTaGATGTACCTGTCGGGAATAAGCCTGGGACTACTCCCAGTTCCT +
Preference number: 1 (lower is better)
Translates to: GFWMQKGLHGRRLRP*MYLSGISLGLLPVP
Trigger: AGGAACTGGGAGTAGTCCCAGGCTTATTCCCGACAGGTACATCCAAGGTCTCAGACGCCTGCCGTGAAGTCCCTTCTGCATCCAGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 90 bp AGCAGAGCAGGGTGCTGCCCTCCTCTGCACTCTGTCCTACCCCCATaGATCCTCACTGTCTGCCCTGCTCTGCCACATCTATTTTACCAT +
Preference number: 1 (lower is better)
Translates to: SRAGCCPPLHSVLPP*ILTVCPALPHLFYH
Trigger: ATGGTAAAATAGATGTGGCAGAGCAGGGCAGACAGTGAGGATTCATGGGGGTAGGACAGAGTGCAGAGGAGGGCAGCACCCTGCTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 90 bp ATCTGTGCAGGGACAGGGGGCAGAACACCTTGGTGTCAGTGGCTCTaGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGGAACT +
Preference number: 1 (lower is better)
Translates to: ICAGTGGRTPWCQWL*FDRVLLSCEGEVGT
Trigger: AGTTCCAACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCCTGCACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 90 bp AGAATGTCAGCACCACACACTATGCCTATGCCCTGCTTTGCATTCTaGGCAGCCCAAGCATCGCTGCCAGGCCATGGCTCCTTTAGCTGT +
Preference number: 1 (lower is better)
Translates to: RMSAPHTMPMPCFAF*AAQASLPGHGSFSC
Trigger: ACAGCTAAAGGAGCCATGGCCTGGCAGCGATGCTTGGGCTGCTCAGAATGCAAAGCAGGGCATAGGCATAGTGTGTGGTGCTGACATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 90 bp GAGGTTGGAACTTGGAGAGTGCACATTGATAAAGAGCTGTGTCTGTaGAGGGTCTGCTGGCCTCTGGGAAGATCCCAGAGTGTCCACACT +
Preference number: 1 (lower is better)
Translates to: EVGTWRVHIDKELCL*RVCWPLGRSQSVHT
Trigger: AGTGTGGACACTCTGGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 90 bp ATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGGAACTTGGAGAGTaGACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTC +
Preference number: 1 (lower is better)
Translates to: IESSSPVKERLELGE*TLIKSCVCAGSAGL
Trigger: GAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAACCTCTCCTTCACAGGAGAGGAGGACTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 90 bp TCAGGTAGCCAATATGCCTCTTCCCTCCTCATTCACAGCCTACTGTaGGTTCCCGTGTTTAGACATGCTGCATTCAGCTCCATCCAAGGA +
Preference number: 1 (lower is better)
Translates to: SGSQYASSLLIHSLL*VPVFRHAAFSSIQG
Trigger: TCCTTGGATGGAGCTGAATGCAGCATGTCTAAACACGGGAACCCACAGTAGGCTGTGAATGAGGAGGGAAGAGGCATATTGGCTACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 90 bp TGCACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTCTaGGAAGATCCCAGAGTGTCCACACTGCTTACATGGAAGCTTTTG +
Preference number: 1 (lower is better)
Translates to: CTLIKSCVCAGSAGL*EDPRVSTLLTWKLL
Trigger: CAAAAGCTTCCATGTAAGCAGTGTGGACACTCTGGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 90 bp TGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGGAACTTaGAGAGTGCACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGC +
Preference number: 1 (lower is better)
Translates to: WFDRVLLSCEGEVGT*RVHIDKELCLCRVC
Trigger: GCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 90 bp ACCAACTCTGTAAAGAGTGTGGGGTTTCCCTTCCCATTCTGCATATaGGGAAGGTACAGAAGATACACTGCAGCCCGTGAACCAGGTGAC +
Preference number: 1 (lower is better)
Translates to: TNSVKSVGFPFPFCI*GRYRRYTAAREPGD
Trigger: GTCACCTGGTTCACGGGCTGCAGTGTATCTTCTGTACCTTCCTCATATGCAGAATGGGAAGGGAAACCCCACACTCTTTACAGAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 90 bp ATTTCTAAGAGGCCTTCCCGAGTGTCAGAACACCTTCAATGCCAGTaGCGGGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATG +
Preference number: 1 (lower is better)
Translates to: ISKRPSRVSEHLQCQ*RVAGRSVQMESLTM
Trigger: CATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTTCTGACACTCGGGAAGGCCTCTTAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GGGACTACTCCCAGTTCCTGCCTCCCCTCTGGTGCTGAGGCAGTTCTGTGTCCGCCCACCACCGCTCAGTaGCACTTTGCACAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: GTTPSSCLPSGAEAVLCPPTTAQ*HFAQGL
Trigger: CAGACCCTGTGCAAAGTGGCACTGAGCGGTGGTGGG...CGGACACAGAACTGCCTCAGCACCAGAGGGGAGGCAGGAACTGGGAGTAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp AGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCGCTGGGGCAAAGCTCTaGGAGCGATGGCTCCTCTAC +
Preference number: 2 (lower is better)
Translates to: RWVNRKRFWWGLRGAATLAGAKL*ERWLLY
Trigger: GTAGAGGAGCCATCGCTCTCAGAGCTTTGCCCCAGC...GAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp CGTGCCTCTAAGAGTGTAGCATTCTGGGGGTACATCTGTGCAGGGACAGGGGGCCCCAGCAGAGCAGGGTaGTGCCCTCCTCTGCACTCT +
Preference number: 2 (lower is better)
Translates to: RASKSVAFWGYICAGTGGPSRAG*CPPLHS
Trigger: AGAGTGCAGAGGAGGGCAGCACCCTGCTCTGCTGGG...GCCCCCTGTCCCTGCACAGATGTACCCCCAGAATGCTACACTCTTAGAGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GCCTTCCCGAGTGTCAGAACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCGGTGCTGCCCTCCTCTaGACTCTGTCCTACCCCCAT +
Preference number: 2 (lower is better)
Translates to: AFPSVRTPSMPVTGGRKVGAALL*TLSYPH
Trigger: ATGGGGGTAGGACAGAGTGCAGAGGAGGGCAGCACC...GACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTTCTGACACTCGGGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp GCCTTCCCGAGTGTCAGAACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCCTGTGCAGGGTCTGCTaGCCTCTGGGAAGATCCCAG +
Preference number: 2 (lower is better)
Translates to: AFPSVRTPSMPVTGGRKVLCRVC*PLGRSQ
Trigger: CTGGGATCTTCCCAGAGGCCAGCAGACCCTGCACAG...GACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTTCTGACACTCGGGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp CGTGCCTCTAAGAGTGTAGCATTCTGGGGGTACATCTGTGCAGGGACAGGGGGCCCCTGCTTTGCATTCTaGGCAGCCCAAGCATCGCTG +
Preference number: 2 (lower is better)
Translates to: RASKSVAFWGYICAGTGGPCFAF*AAQASL
Trigger: CAGCGATGCTTGGGCTGCTCAGAATGCAAAGCAGGG...GCCCCCTGTCCCTGCACAGATGTACCCCCAGAATGCTACACTCTTAGAGGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp ACATCTGTGCAGGGACAGGGGGCAGAACACCTTGGTGTCAGTGGCTCTGGTTTGCCAGGCCCAGGCCTATaGTCCTTCCTCTTTCAGGCA +
Preference number: 2 (lower is better)
Translates to: TSVQGQGAEHLGVSGSGLPGPGL*SFLFQA
Trigger: TGCCTGAAAGAGGAAGGAGCATAGGCCTGGGCCTGG...CAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCCTGCACAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp TTGGATGTACCTGTCGGGAATAAGCCTGGGACTACTCCCAGTTCCTGCCTCCCCTGTCTGTGCAGGGTCTaGTGGCCTCTGGGAAGATCC +
Preference number: 2 (lower is better)
Translates to: LDVPVGNKPGTTPSSCLPCLCRV*WPLGRS
Trigger: GGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACA...GGGGAGGCAGGAACTGGGAGTAGTCCCAGGCTTATTCCCGACAGGTACATCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATAAAGAGCTGTGTCTGTaGAGGGTCTGCTGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: GEQEEILVGTQGSSDPPYKELCL*RVCWPL
Trigger: CAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTT...ATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp GCTTCTAAGATGCCCAGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGGTCTGCTGGCCTCTaGGAAGATCCCAGAGTGTCC +
Preference number: 2 (lower is better)
Translates to: ASKMPRWVNRKRFWWGLRGSAGL*EDPRVS
Trigger: GGACACTCTGGGATCTTCCCAGAGGCCAGCAGACCC...CCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCTGGGCATCTTAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CAA 90 bp GTGCAGGGACAGGGGGCAGAACACCTTGGTGTCAGTGGCTCTGGTTaGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGGAACTTGGA +
Preference number: 2 (lower is better)
Translates to: VQGQGAEHLGVSGSG*IESSSPVKERLELG
Trigger: TCCAAGTTCCAACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CAA 90 bp TGGGTTCTGGATGCAGAAGGGACTTCACGGCAGGCGTCTGAGACCTaGGATGTACCTGTCGGGAATAAGCCTGGGACTACTCCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: WVLDAEGTSRQASET*DVPVGNKPGTTPSS
Trigger: GGAACTGGGAGTAGTCCCAGGCTTATTCCCGACAGGTACATCCAAGGTCTCAGACGCCTGCCGTGAAGTCCCTTCTGCATCCAGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp TGGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTCCCACCACCGCTCAGTaGCACTTTGCACAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: WCQWLWFDRVLLSCEGEVPTTAQ*HFAQGL
Trigger: CAGACCCTGTGCAAAGTGGCACTGAGCGGTGGTGGG...AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GGAGAGCTCACTGTACCATGCCTGGGCTGGGAGAAGCTCCCCCTCCCTTTCCCAACATCTATTTTACCATaGTGGGATGCCCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: GELTVPCLGWEKLPLPFPTSILP*WDAPEG
Trigger: TCCCTCAGGGGCATCCCAGCATGGTAAAATAGATGT...TGGGAAAGGGAGGGGGAGCTTCTCCCAGCCCAGGCATGGTACAGTGAGCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GCTTCTAAGATGCCCAGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGCCAGGCCCAGGCCTATaGTCCTTCCTCTTTCAGGCA +
Preference number: 2 (lower is better)
Translates to: ASKMPRWVNRKRFWWGLRPGPGL*SFLFQA
Trigger: TGCCTGAAAGAGGAAGGAGCATAGGCCTGGGCCTGG...CCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCTGGGCATCTTAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp CTGAGGCAGTTCTGTGTCCGCTCCAGGGAGACCAGTCGCTCTCCTTTGTCCTCCTCCAGGGTTCTGTTCTaGACTTTGTCCCAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LRQFCVRSRETSRSPLSSSRVLF*TLSQER
Trigger: CCTTTCCTGGGACAAAGTGCAGAACAGAACCCTGGA...GGAGGACAAAGGAGAGCGACTGGTCTCCCTGGAGCGGACACAGAACTGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp GGAGAGCTCACTGTACCATGCCTGGGCTGGGAGAAGCTCCCCCTCCCTTTCCCATCTATTTTACCATGCTaGGATGCCCCTGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: GELTVPCLGWEKLPLPFPSILPC*DAPEGR
Trigger: TCTTCCCTCAGGGGCATCCCAGCATGGTAAAATAGA...TGGGAAAGGGAGGGGGAGCTTCTCCCAGCCCAGGCATGGTACAGTGAGCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp TGGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTTCACTGTACCATGCCTaGGCTGGGAGAAGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: WCQWLWFDRVLLSCEGEVSLYHA*AGRSSP
Trigger: GGGGGAGCTTCTCCCAGCCCAGGCATGGTACAGTGA...AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGGCTTGGCAGTACTCTTaGGTCCCAGCAGAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGAWQYS*VPAEQG
Trigger: ACCCTGCTCTGCTGGGACTCAAGAGTACTGCCAAGC...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGTGTCTGTGCAGGGTCTaGTGGCCTCTGGGAAGATCC +
Preference number: 2 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGCLCRV*WPLGRS
Trigger: GGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACA...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp TCTGGGTTCTGGATGCAGAAGGGACTTCACGGCAGGCGTCTGAGACCTTGGATGAGCTCTGTGGCAGGCTaGACTAGACACACACACAGA +
Preference number: 2 (lower is better)
Translates to: SGFWMQKGLHGRRLRPWMSSVAG*TRHTHR
Trigger: TCTGTGTGTGTGTCTAGTCCAGCCTGCCACAGAGCT...CATCCAAGGTCTCAGACGCCTGCCGTGAAGTCCCTTCTGCATCCAGAACCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp CGGTTTGAATCACAAATAGGAAAAGGCAGCCGAGAAGCCCCAGCACTGAAAGTGGTACCATGCCTGGGCTaGGAGAAGCTCCCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: RFESQIGKGSREAPALKVVPCLG*EKLPLP
Trigger: AGGGAGGGGGAGCTTCTCCCAGCCCAGGCATGGTAC...CACTTTCAGTGCTGGGGCTTCTCGGCTGCCTTTTCCTATTTGTGATTCAAACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp AGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATAGAGCTTCTGCCTACACCTTGGTGTCAGTaGCTCTGGTTTGATCGAGTC +
Preference number: 2 (lower is better)
Translates to: RFWWGLRGAATLPIELLPTPWCQ*LWFDRV
Trigger: GACTCGATCAAACCAGAGCCACTGACACCAAGGTGT...AGGCAGAAGCTCTATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp AACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCTGTCCAAATGGAATCTCGCTTGGCAGTACTCTTaGGTCCCAGCAGAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: NTFNASDGWQEGLSKWNLAWQYS*VPAEQG
Trigger: ACCCTGCTCTGCTGGGACTCAAGAGTACTGCCAAGC...GAGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp CTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAAATAGGAAAAGGCAGCCGAAGATGCCCAGGTGGGTaGACAGGAAGAGATTCTGGT +
Preference number: 2 (lower is better)
Translates to: LREGSVGRFESQIGKGSRRCPGG*TGRDSG
Trigger: ACCAGAATCTCTTCCTGTTCACCCACCTGGGCATCT...TCGGCTGCCTTTTCCTATTTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp CAGGCCTATGCTCCTTCCTCTTTCAGGCATTGGACACCTAGTTGTTACCTTTCTCCCAGCAGAGCAGGGTaGTGCCCTCCTCTGCACTCT +
Preference number: 2 (lower is better)
Translates to: QAYAPSSFRHWTPSCYLSPSRAG*CPPLHS
Trigger: AGAGTGCAGAGGAGGGCAGCACCCTGCTCTGCTGGG...AGAAAGGTAACAACTAGGTGTCCAATGCCTGAAAGAGGAAGGAGCATAGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp TTCCCTTCCCATTCTGCATATGAGGAAGGTACAGAAGATACACTGCAGCCCGTGTCACTGTACCATGCCTaGGCTGGGAGAAGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: FPSHSAYEEGTEDTLQPVSLYHA*AGRSSP
Trigger: GGGGGAGCTTCTCCCAGCCCAGGCATGGTACAGTGA...CACGGGCTGCAGTGTATCTTCTGTACCTTCCTCATATGCAGAATGGGAAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp CTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAAATAGGAAAAGGCAGCCGAAACAGGAAGAGATTCTaGTGGGGACTCAGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: LREGSVGRFESQIGKGSRNRKRF*WGLRGA
Trigger: TGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTT...TCGGCTGCCTTTTCCTATTTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CAA 90 bp TCCTCCTCTCCTGTGAAGGAGAGGTTGGAACTTGGAGAGTGCACATaGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SSSPVKERLELGECT*IKSCVCAGSAGLWE
Trigger: TTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAACCTCTCCTTCACAGGAGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp GGGACTACTCCCAGTTCCTGCCTCCCCTCTGGTGCTGAGGCAGTTCTGTGTCCGGTGCATCCAGAAATATaGGTGGAAGCAAAATGGATA +
Preference number: 2 (lower is better)
Translates to: GTTPSSCLPSGAEAVLCPVHPEI*VEAKWI
Trigger: TATCCATTTTGCTTCCACTCATATTTCTGGATGCAC...CGGACACAGAACTGCCTCAGCACCAGAGGGGAGGCAGGAACTGGGAGTAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp AGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATAGAGCTTCTGCCTTGTCTGGAGCAGCTCTaGTTTGCTCTGAGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: RFWWGLRGAATLPIELLPCLEQL*FALRKE
Trigger: TTCTTTTCTCAGAGCAAATCAGAGCTGCTCCAGACA...AGGCAGAAGCTCTATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp GCCTTCCCGAGTGTCAGAACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCAACCACATCTCTCCCTaGGATTTGAGATTCCCTAAG +
Preference number: 2 (lower is better)
Translates to: AFPSVRTPSMPVTGGRKVNHISP*DLRFPK
Trigger: CTTAGGGAATCTCAAATCTCAGGGAGAGATGTGGTT...GACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTTCTGACACTCGGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp GCTTCTAAGATGCCCAGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGTCTATTTTACCATGCTaGGATGCCCCTGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: ASKMPRWVNRKRFWWGLRSILPC*DAPEGR
Trigger: TCTTCCCTCAGGGGCATCCCAGCATGGTAAAATAGA...CCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCTGGGCATCTTAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp ACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTCTGGGAAGATCCCAATTGCAGAGCTCTCTaGGGAGAGCTCACTGTACCA +
Preference number: 2 (lower is better)
Translates to: TLIKSCVCAGSAGLWEDPNCRAL*GELTVP
Trigger: TGGTACAGTGAGCTCTCCCCAGAGAGCTCTGCAATT...GGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp GCCCCAATAGTAGACATTTCTAAGAGGCCTTCCCGAGTGTCAGAACACCTTCAAAGGAAGAGATTCTGGTaGGGACTCAGGGGAGCAGCG +
Preference number: 2 (lower is better)
Translates to: APIVDISKRPSRVSEHLQRKRFW*GLRGAA
Trigger: CGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCT...TTGAAGGTGTTCTGACACTCGGGAAGGCCTCTTAGAAATGTCTACTATTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp CTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAAATAGGAAAAGGCAGCCGACTACTTTACAACCTTTaGCTGTCCTTTCTCCCAACC +
Preference number: 2 (lower is better)
Translates to: LREGSVGRFESQIGKGSRLLYNL*LSFLPT
Trigger: GGTTGGGAGAAAGGACAGTCAAAGGTTGTAAAGTAG...TCGGCTGCCTTTTCCTATTTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTGCTGGGGCAAAGCTCTaGGAGCGATGGCTCCTCTAC +
Preference number: 2 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVAGAKL*ERWLLY
Trigger: GTAGAGGAGCCATCGCTCTCAGAGCTTTGCCCCAGC...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GCCCCAATAGTAGACATTTCTAAGAGGCCTTCCCGAGTGTCAGAACACCTTCAAGCCTATGCCCTGCTTTaGATTCTGAGCAGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: APIVDISKRPSRVSEHLQAYALL*ILSSPS
Trigger: GCTTGGGCTGCTCAGAATGCAAAGCAGGGCATAGGC...TTGAAGGTGTTCTGACACTCGGGAAGGCCTCTTAGAAATGTCTACTATTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp TCTGTGTCCAGGAATACTCTGCTCACTGTGGCCCATGGCAATAGGGTTCTAGGCAGGGTCTGCTATGCATaGGATAAGAATGTCAGCACC +
Preference number: 2 (lower is better)
Translates to: SVSRNTLLTVAHGNRVLGRVCYA*DKNVST
Trigger: GGTGCTGACATTCTTATCGCATGCATAGCAGACCCT...GCCTAGAACCCTATTGCCATGGGCCACAGTGAGCAGAGTATTCCTGGACACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp AACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCTGTCCAAATGGAATCTCAATTGCAGAGCTCTCTaGGGAGAGCTCACTGTACCA +
Preference number: 2 (lower is better)
Translates to: NTFNASDGWQEGLSKWNLNCRAL*GELTVP
Trigger: TGGTACAGTGAGCTCTCCCCAGAGAGCTCTGCAATT...GAGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CAA 90 bp AGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTaGGAACTTGGAGAGTGCACATTGATAAAGAGCTGTGTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: SGSGLIESSSPVKER*ELGECTLIKSCVCA
Trigger: TGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTCCCTGCTTTGCATTCTaGGCAGCCCAAGCATCGCTG +
Preference number: 2 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVPCFAF*AAQASL
Trigger: CAGCGATGCTTGGGCTGCTCAGAATGCAAAGCAGGG...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp GCTTCTAAGATGCCCAGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGAGCTCTGATTTGCTCTaGGAAAAGAAACCCTCAGAT +
Preference number: 2 (lower is better)
Translates to: ASKMPRWVNRKRFWWGLRSSDLL*EKKPSD
Trigger: ATCTGAGGGTTTCTTTTCTCAGAGCAAATCAGAGCT...CCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCTGGGCATCTTAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGTGTCTGGAGCAGCTCTaGTTTGCTCTGAGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGCLEQL*FALRKE
Trigger: TTCTTTTCTCAGAGCAAATCAGAGCTGCTCCAGACA...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp CGGTTTGAATCACAAATAGGAAAAGGCAGCCGAGAAGCCCCAGCACTGAAAGTGTCTCTCCCTGAGATTTaGGATTCCCTAAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: RFESQIGKGSREAPALKVSLPEI*DSLRSR
Trigger: CCTGGACCTTAGGGAATCTCAAATCTCAGGGAGAGA...CACTTTCAGTGCTGGGGCTTCTCGGCTGCCTTTTCCTATTTGTGATTCAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp ACTTGGAGAGTGCACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTAGGGTCTGCTATGCATaGGATAAGAATGTCAGCACC +
Preference number: 2 (lower is better)
Translates to: TWRVHIDKELCLCRVCWPRVCYA*DKNVST
Trigger: GGTGCTGACATTCTTATCGCATGCATAGCAGACCCT...AGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGGGAGCAGCTCTGATTTaGTCTGAGAAAAGAAACCCT +
Preference number: 2 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGGAALI*SEKRNP
Trigger: AGGGTTTCTTTTCTCAGAGCAAATCAGAGCTGCTCC...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GCCCCAATAGTAGACATTTCTAAGAGGCCTTCCCGAGTGTCAGAACACCTTCAAACTCTGGGTTCTGGATaGAGAAGGGACTTCACGGCA +
Preference number: 2 (lower is better)
Translates to: APIVDISKRPSRVSEHLQTLGSG*RRDFTA
Trigger: TGCCGTGAAGTCCCTTCTGCATCCAGAACCCAGAGT...TTGAAGGTGTTCTGACACTCGGGAAGGCCTCTTAGAAATGTCTACTATTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp CAGGCCTATGCTCCTTCCTCTTTCAGGCATTGGACACCTAGTTGTTACCTTTCTAGCTCTGTGGCAGGCTaGACTAGACACACACACAGA +
Preference number: 2 (lower is better)
Translates to: QAYAPSSFRHWTPSCYLSSSVAG*TRHTHR
Trigger: TCTGTGTGTGTGTCTAGTCCAGCCTGCCACAGAGCT...AGAAAGGTAACAACTAGGTGTCCAATGCCTGAAAGAGGAAGGAGCATAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTAGGAAGAGATTCTGGTaGGGACTCAGGGGAGCAGCG +
Preference number: 2 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVRKRFW*GLRGAA
Trigger: CGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCT...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGTTCCCATTCTGCATATaGGGAAGGTACAGAAGATAC +
Preference number: 2 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGFPFCI*GRYRRY
Trigger: GTATCTTCTGTACCTTCCTCATATGCAGAATGGGAA...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp TGGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTCTGCTGCTATATGTATaGCCTTCAGGCTATTCTAAC +
Preference number: 2 (lower is better)
Translates to: WCQWLWFDRVLLSCEGEVLLLYV*PSGYSN
Trigger: GTTAGAATAGCCTGAAGGGCATACATATAGCAGCAG...AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGCTGCTGCTATATGTATaGCCTTCAGGCTATTCTAAC +
Preference number: 2 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGLLLYV*PSGYSN
Trigger: GTTAGAATAGCCTGAAGGGCATACATATAGCAGCAG...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp TGGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGTAATGGATCAGCTGTaGATCCAGAAATATGAGTGG +
Preference number: 2 (lower is better)
Translates to: WCQWLWFDRVLLSCEGEVVMDQL*IQKYEW
Trigger: CCACTCATATTTCTGGATGCACAGCTGATCCATTAC...AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp CTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAAATAGGAAAAGGCAGCCGATTGGAACTTGGAGAGTaGACATTGATAAAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: LREGSVGRFESQIGKGSRLELGE*TLIKSC
Trigger: ACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAA...TCGGCTGCCTTTTCCTATTTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp TTCCCTTCCCATTCTGCATATGAGGAAGGTACAGAAGATACACTGCAGCCCGTGTCTAAGATGCCCAGGTaGGTGAACAGGAAGAGATTC +
Preference number: 2 (lower is better)
Translates to: FPSHSAYEEGTEDTLQPVSKMPR*VNRKRF
Trigger: GAATCTCTTCCTGTTCACCCACCTGGGCATCTTAGA...CACGGGCTGCAGTGTATCTTCTGTACCTTCCTCATATGCAGAATGGGAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp CGGTTTGAATCACAAATAGGAAAAGGCAGCCGAGAAGCCCCAGCACTGAAAGTGCACAAGGAGGATACTTaGAACTCAAAGTCCCAGACA +
Preference number: 2 (lower is better)
Translates to: RFESQIGKGSREAPALKVHKEDT*NSKSQT
Trigger: TGTCTGGGACTTTGAGTTTCAAGTATCCTCCTTGTG...CACTTTCAGTGCTGGGGCTTCTCGGCTGCCTTTTCCTATTTGTGATTCAAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CCA 90 bp AACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTCCTCTTTCAGGCATTaGACACCTAGTTGTTACCTT +
Preference number: 2 (lower is better)
Translates to: NTFNASDGWQEGLSKWNLSSFRH*TPSCYL
Trigger: AAGGTAACAACTAGGTGTCCAATGCCTGAAAGAGGA...GAGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTACATCTATTTTACCATaGTGGGATGCCCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVTSILP*WDAPEG
Trigger: TCCCTCAGGGGCATCCCAGCATGGTAAAATAGATGT...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp CGGTTTGAATCACAAATAGGAAAAGGCAGCCGAGAAGCCCCAGCACTGAAAGTGTTGGAACTTGGAGAGTaGACATTGATAAAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: RFESQIGKGSREAPALKVLELGE*TLIKSC
Trigger: ACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAA...CACTTTCAGTGCTGGGGCTTCTCGGCTGCCTTTTCCTATTTGTGATTCAAACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR TCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTCACAAGGAGGATACTTaGAACTCAAAGTCCCAGACA +
Preference number: 2 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVHKEDT*NSKSQT
Trigger: TGTCTGGGACTTTGAGTTTCAAGTATCCTCCTTGTG...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR GCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTCCAGAGTGTCCACACTaGTTACATGGAAGCTTTTGT +
Preference number: 2 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVPECPH*LHGSFC
Trigger: ACAAAAGCTTCCATGTAAGCAGTGTGGACACTCTGG...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp GCAGAGCTCTCTGGGGAGAGCTCACTGTACCATGCCTaGGCTGGGAGAAGCTCCCCCTCCCTTTCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: AELSGESSLYHA*AGRSSPSLSQP
Trigger: TGGCTGGGAAAGGGAGGGGGAGCTTCTCCCAGCCCAGGCATGGTACAGTGAGCTCTCCCCAGAGAGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 72 bp TGGGACTACTCCCAGTTCCTGCCTCCCCTCTGGTGCTaGGGCAGTTCTGTGTCCGCTCCAGGGAGACCAGTC +
Preference number: 3 (lower is better)
Translates to: WDYSQFLPPLWC*GSSVSAPGRPV
Trigger: GACTGGTCTCCCTGGAGCGGACACAGAACTGCCTCAGCACCAGAGGGGAGGCAGGAACTGGGAGTAGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 72 bp AGAAGCCCCAGCACTGAAAGTGAGCCCCAGAGCCAGTaGGCCTGGACTCTGGGTTCTGGATGCAGAAGGGAC +
Preference number: 3 (lower is better)
Translates to: RSPSTESEPQSQ*AWTLGSGCRRD
Trigger: GTCCCTTCTGCATCCAGAACCCAGAGTCCAGGCTCACTGGCTCTGGGGCTCACTTTCAGTGCTGGGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 72 bp TGCCCTGCTTTGCATTCTGAGCAGCCCAAGCATCGCTaGCAGGCCATGGCTCCTTTAGCTGTAGCTCCTCCA +
Preference number: 3 (lower is better)
Translates to: CPALHSEQPKHR*QAMAPLAVAPP
Trigger: TGGAGGAGCTACAGCTAAAGGAGCCATGGCCTGGCAGCGATGCTTGGGCTGCTCAGAATGCAAAGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp GGGACAGGGGGCAGAACACCTTGGTGTCAGTGGCTCTaGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: GTGGRTPWCQWL*FDRVLLSCEGE
Trigger: CTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp GGGTACATCTGTGCAGGGACAGGGGGCAGAACACCTTaGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: GYICAGTGGRTP*CQWLWFDRVLL
Trigger: GAGGAGGACTCGATCAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCCTGCACAGATGTACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp ACAGACGTGGCCCGTGCCTCTAAGAGTGTAGCATTCTaGGGGTACATCTGTGCAGGGACAGGGGGCAGAACA +
Preference number: 3 (lower is better)
Translates to: TDVARASKSVAF*GYICAGTGGRT
Trigger: TGTTCTGCCCCCTGTCCCTGCACAGATGTACCCCCAGAATGCTACACTCTTAGAGGCACGGGCCACGTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp AAGATGCCCAGGTGGGTGAACAGGAAGAGATTCTGGTaGGGACTCAGGGGAGCAGCGACCCTCCCTATAGAG +
Preference number: 3 (lower is better)
Translates to: KMPRWVNRKRFW*GLRGAATLPIE
Trigger: CTCTATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCTGGGCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp TGTGCAGGGACAGGGGGCAGAACACCTTGGTGTCAGTaGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAA +
Preference number: 3 (lower is better)
Translates to: CAGTGGRTPWCQ*LWFDRVLLSCE
Trigger: TTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp TCTAAGATGCCCAGGTGGGTGAACAGGAAGAGATTCTaGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATA +
Preference number: 3 (lower is better)
Translates to: SKMPRWVNRKRF*WGLRGAATLPI
Trigger: TATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCTGGGCATCTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CAA 90 bp CTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAAATAGGAAAAGGCAGCCGATGCCTATGCCCTGCTTaGCATTCTGAGCAGCCCAAG +
Preference number: 3 (lower is better)
Translates to: LREGSVGRFESQIGKGSRCLCPA*HSEQPK
Trigger: CTTGGGCTGCTCAGAATGCAAAGCAGGGCATAGGCA...TCGGCTGCCTTTTCCTATTTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 72 bp AATGTCAGCACCACACACTATGCCTATGCCCTGCTTTaGATTCTGAGCAGCCCAAGCATCGCTGCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: NVSTTHYAYALL*ILSSPSIAARP
Trigger: TGGCCTGGCAGCGATGCTTGGGCTGCTCAGAATGCAAAGCAGGGCATAGGCATAGTGTGTGGTGCTGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 72 bp AGGCCTTCCCGAGTGTCAGAACACCTTCAATGCCAGTaGCGGGTGGCAGGAAGGTCTGTCCAAATGGAATCT +
Preference number: 3 (lower is better)
Translates to: RPSRVSEHLQCQ*RVAGRSVQMES
Trigger: AGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTTCTGACACTCGGGAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 72 bp GTGCACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTaGTGGCCTCTGGGAAGATCCCAGAGTGTCCACACT +
Preference number: 3 (lower is better)
Translates to: VHIDKELCLCRV*WPLGRSQSVHT
Trigger: AGTGTGGACACTCTGGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp ATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTCTaGGAAGATCCCAGAGTGTCCACACTGCTTACATGG +
Preference number: 3 (lower is better)
Translates to: IKSCVCAGSAGL*EDPRVSTLLTW
Trigger: CCATGTAAGCAGTGTGGACACTCTGGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CAA 90 bp GCCAATATGCCTCTTCCCTCCTCATTCACAGCCTACTGTGGGTTCCCGTGTTTATGCCTATGCCCTGCTTaGCATTCTGAGCAGCCCAAG +
Preference number: 3 (lower is better)
Translates to: ANMPLPSSFTAYCGFPCLCLCPA*HSEQPK
Trigger: CTTGGGCTGCTCAGAATGCAAAGCAGGGCATAGGCA...TAAACACGGGAACCCACAGTAGGCTGTGAATGAGGAGGGAAGAGGCATATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CAA 90 bp CGGTTTGAATCACAAATAGGAAAAGGCAGCCGAGAAGCCCCAGCACTGAAAGTGACCAGTCGCTCTCCTTaGTCCTCCCTCCCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: RFESQIGKGSREAPALKVTSRSP*SSLPQH
Trigger: ATGCTGAGGGAGGGAGGACAAAGGAGAGCGACTGGT...CACTTTCAGTGCTGGGGCTTCTCGGCTGCCTTTTCCTATTTGTGATTCAAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 72 bp GCGTTTGGTCACAAGCAGGGCCGCAGTGAGCTCTGCTaGTATATGTATGCCCTTCAGGCTATTCTAACAGAC +
Preference number: 3 (lower is better)
Translates to: AFGHKQGRSELC*YMYALQAILTD
Trigger: GTCTGTTAGAATAGCCTGAAGGGCATACATATAGCAGCAGAGCTCACTGCGGCCCTGCTTGTGACCAAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 72 bp ACTTGGAGAGTGCACATTGATAAAGAGCTGTGTCTGTaGAGGGTCTGCTGGCCTCTGGGAAGATCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: TWRVHIDKELCL*RVCWPLGRSQS
Trigger: ACTCTGGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CAA 90 bp GAATCTCTAACAATGGTTCTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAAGTCAGTGGCTCTGGTTaGATCGAGTCCTCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: ESLTMVLREGSVGRFESQVSGSG*IESSSP
Trigger: AGGAGAGGAGGACTCGATCAAACCAGAGCCACTGAC...TTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAGAACCATTGTTAGAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp CAGGCCCAGGCCTATGCTCCTTCCTCTTTCAGGCATTaGACACCTAGTTGTTACCTTTCTCTCAGCAGCAAA +
Preference number: 3 (lower is better)
Translates to: QAQAYAPSSFRH*TPSCYLSLSSK
Trigger: TTTGCTGCTGAGAGAAAGGTAACAACTAGGTGTCCAATGCCTGAAAGAGGAAGGAGCATAGGCCTGGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CCA 72 bp CGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGGAACTTaGAGAGTGCACATTGATAAAGAGCTGTGTCTGTGC +
Preference number: 3 (lower is better)
Translates to: RVLLSCEGEVGT*RVHIDKELCLC
Trigger: GCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAACCTCTCCTTCACAGGAGAGGAGGACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CAA 90 bp ACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTCTGGGAAGATCCCCCTACTTTACAACCTTaGACTGTCCTTTCTCCCAAC +
Preference number: 3 (lower is better)
Translates to: TLIKSCVCAGSAGLWEDPPTLQP*TVLSPN
Trigger: GTTGGGAGAAAGGACAGTCAAAGGTTGTAAAGTAGG...GGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 72 bp CTGCATTCAGCTCCATCCAAGGAAGGTCTGTACAGCTaGGAGCAAGCTCAGTCTACGCACTCAGTATTAAGC +
Preference number: 3 (lower is better)
Translates to: LHSAPSKEGLYS*EQAQSTHSVLS
Trigger: GCTTAATACTGAGTGCGTAGACTGAGCTTGCTCTCAGCTGTACAGACCTTCCTTGGATGGAGCTGAATGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR GCA 72 bp CTGCTGGCCTCTGGGAAGATCCCAGAGTGTCCACACTaGTTACATGGAAGCTTTTGTGATGTTAGAGAACAG +
Preference number: 3 (lower is better)
Translates to: LLASGKIPECPH*LHGSFCDVREQ
Trigger: CTGTTCTCTAACATCACAAAAGCTTCCATGTAAGCAGTGTGGACACTCTGGGATCTTCCCAGAGGCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CAA 90 bp CCCGTGTTTAGACATGCTGCATTCAGCTCCATCCAAGGAAGGTCTGTACAGCTGCCTACTTTACAACCTTaGACTGTCCTTTCTCCCAAC +
Preference number: 3 (lower is better)
Translates to: PVFRHAAFSSIQGRSVQLPTLQP*TVLSPN
Trigger: GTTGGGAGAAAGGACAGTCAAAGGTTGTAAAGTAGG...CAGCTGTACAGACCTTCCTTGGATGGAGCTGAATGCAGCATGTCTAAACACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR TCA 72 bp GTAAAGAGTGTGGGGTTTCCCTTCCCATTCTGCATATaGGGAAGGTACAGAAGATACACTGCAGCCCGTGAA +
Preference number: 3 (lower is better)
Translates to: VKSVGFPFPFCI*GRYRRYTAARE
Trigger: TTCACGGGCTGCAGTGTATCTTCTGTACCTTCCTCATATGCAGAATGGGAAGGGAAACCCCACACTCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CAA 90 bp TTCCCTTCCCATTCTGCATATGAGGAAGGTACAGAAGATACACTGCAGCCCGTGGATTTCCACACAAAATaGCAGATACCCCTAATTGCA +
Preference number: 3 (lower is better)
Translates to: FPSHSAYEEGTEDTLQPVDFHTK*QIPLIA
Trigger: TGCAATTAGGGGTATCTGCAATTTTGTGTGGAAATC...CACGGGCTGCAGTGTATCTTCTGTACCTTCCTCATATGCAGAATGGGAAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR-3UTR CAA 90 bp GAATCTCTAACAATGGTTCTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAAACCTCTTCATGGAATTaGTGTTTAACACCGTATTCC +
Preference number: 3 (lower is better)
Translates to: ESLTMVLREGSVGRFESQTSSWN*CLTPYS
Trigger: GGAATACGGTGTTAAACACAAATTCCATGAAGAGGT...TTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAGAACCATTGTTAGAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp GGGACTACTCCCAGTTCCTGCCTCCCCTCTGGTGCTGAGGCAGTTCTGTGTCCGGCCACAACGTTCCACTaGTTCTCCCAAGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTTPSSCLPSGAEAVLCPATTFH*FSQGSS
Trigger: GCTGGACCCTTGGGAGAACCAGTGGAACGTTGTGGC...CGGACACAGAACTGCCTCAGCACCAGAGGGGAGGCAGGAACTGGGAGTAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp CGTGCCTCTAAGAGTGTAGCATTCTGGGGGTACATCTGTGCAGGGACAGGGGGCAGGTTGGAGGGGTGCTaGTGGGGTGTCTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: RASKSVAFWGYICAGTGGRLEGC*WGVLMA
Trigger: AGCCATCAAGACACCCCAGCAGCACCCCTCCAACCT...GCCCCCTGTCCCTGCACAGATGTACCCCCAGAATGCTACACTCTTAGAGGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CCA 90 bp AGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCAGCACTGGTGGAATTaGTTCGCAGTGAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RWVNRKRFWWGLRGAATLQHWWN*FAVRGG
Trigger: CCCTCCTCTCACTGCGAACCAATTCCACCAGTGCTG...GAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR TCA 90 bp TTGGATGTACCTGTCGGGAATAAGCCTGGGACTACTCCCAGTTCCTGCCTCCCCGGAATTGGTTCGCAGTaGGAGGAGGGGACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LDVPVGNKPGTTPSSCLPGIGSQ*EEGTRH
Trigger: ATGCCGAGTCCCCTCCTCTCACTGCGAACCAATTCC...GGGGAGGCAGGAACTGGGAGTAGTCCCAGGCTTATTCCCGACAGGTACATCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CAA 72 bp TTCTGTGTCCGCTCCAGGGAGACCAGTCGCTCTCCTTaGTCCTCCCTCCCTCAGCATTCCCTGGAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: FCVRSRETSRSP*SSLPQHSLESS
Trigger: GGAACTTTCCAGGGAATGCTGAGGGAGGGAGGACAAAGGAGAGCGACTGGTCTCCCTGGAGCGGACACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR TCA 90 bp GGAGAGCTCACTGTACCATGCCTGGGCTGGGAGAAGCTCCCCCTCCCTTTCCCAGGGTCCAGCCTCCGATaGCATACAGTTTATTGTTCA +
Preference number: 4 (lower is better)
Translates to: GELTVPCLGWEKLPLPFPGSSLR*HTVYCS
Trigger: TGAACAATAAACTGTATGTCATCGGAGGCTGGACCC...TGGGAAAGGGAGGGGGAGCTTCTCCCAGCCCAGGCATGGTACAGTGAGCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp ACATCTGTGCAGGGACAGGGGGCAGAACACCTTGGTGTCAGTGGCTCTGGTTTGAGAGTACCGCATGGGTaGCCGCTCTCTCCATTGATC +
Preference number: 4 (lower is better)
Translates to: TSVQGQGAEHLGVSGSGLRVPHG*PLSPLI
Trigger: GATCAATGGAGAGAGCGGGCACCCATGCGGTACTCT...CAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCCTGCACAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CAA 72 bp GAATGTCAGCACCACACACTATGCCTATGCCCTGCTTaGCATTCTGAGCAGCCCAAGCATCGCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ECQHHTLCLCPA*HSEQPKHRCQA
Trigger: GGCCTGGCAGCGATGCTTGGGCTGCTCAGAATGCAAAGCAGGGCATAGGCATAGTGTGTGGTGCTGACATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CAA 72 bp CAGGGGGCAGAACACCTTGGTGTCAGTGGCTCTGGTTaGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QGAEHLGVSGSG*IESSSPVKERL
Trigger: CAACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp GGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATGAGCCTAGTGGCAGTTaGTTCTCCAGCCACAATTAC +
Preference number: 4 (lower is better)
Translates to: GEQEEILVGTQGSSDPPYEPSGS*FSSHNY
Trigger: GTAATTGTGGCTGGAGAAGCAACTGCCACTAGGCTC...ATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp ATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTCTGGGAAGATCCCAGAGTGAGAGTACCGCATGGGTaGCCGCTCTCTCCATTGATC +
Preference number: 4 (lower is better)
Translates to: IKSCVCAGSAGLWEDPRVRVPHG*PLSPLI
Trigger: GATCAATGGAGAGAGCGGGCACCCATGCGGTACTCT...CACTCTGGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp AGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCACTGTTGACGACGGCTaGACTGAATCGGTACTTAGA +
Preference number: 4 (lower is better)
Translates to: RWVNRKRFWWGLRGAATLTVDDG*TESVLR
Trigger: TCTAAGTACCGATTCAGTGCAGCCGTCGTCAACAGT...GAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp GGGACTACTCCCAGTTCCTGCCTCCCCTCTGGTGCTGAGGCAGTTCTGTGTCCGTCCATTGATCTTGGCTaGGGTCATACTGCAACAGTT +
Preference number: 4 (lower is better)
Translates to: GTTPSSCLPSGAEAVLCPSIDLG*GHTATV
Trigger: AACTGTTGCAGTATGACCCCAGCCAAGATCAATGGA...CGGACACAGAACTGCCTCAGCACCAGAGGGGAGGCAGGAACTGGGAGTAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR TCA 90 bp GGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATCAGTATTGTTTTCCATaGCTACCCCAGTGCACACAG +
Preference number: 4 (lower is better)
Translates to: GEQEEILVGTQGSSDPPYQYCFP*LPQCTQ
Trigger: CTGTGTGCACTGGGGTAGTCATGGAAAACAATACTG...ATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp ACTTGGAGAGTGCACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTGCCCGCTCTCTCCATTaGTCTTGGCTGGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: TWRVHIDKELCLCRVCWPARSLH*SWLGSY
Trigger: GTATGACCCCAGCCAAGATCAATGGAGAGAGCGGGC...AGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp GGGACTACTCCCAGTTCCTGCCTCCCCTCTGGTGCTGAGGCAGTTCTGTGTCCGATCAGACTTAATAAGTaGCAGAAGCTGGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTTPSSCLPSGAEAVLCPIRLNK*QKLVSF
Trigger: GAAGCTCACCAGCTTCTGGCACTTATTAAGTCTGAT...CGGACACAGAACTGCCTCAGCACCAGAGGGGAGGCAGGAACTGGGAGTAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp CCCGTGTTTAGACATGCTGCATTCAGCTCCATCCAAGGAAGGTCTGTACAGCTGCGAAGGTTGGAGGGGTaGTGCTGGGGTGTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PVFRHAAFSSIQGRSVQLRRLEG*CWGVLM
Trigger: CATCAAGACACCCCAGCAGCACCCCTCCAACCTTCG...CAGCTGTACAGACCTTCCTTGGATGGAGCTGAATGCAGCATGTCTAAACACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CCA 90 bp ACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTCTGGGAAGATCCCTTGGAGGGGTGCTGCTaGGGTGTCTTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLIKSCVCAGSAGLWEDPLEGCC*GVLMAL
Trigger: CAAAGCCATCAAGACACCCCAGCAGCACCCCTCCAA...GGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CCA 90 bp AGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCGGTCATAACAAAAACTaGCATCCCCATAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RWVNRKRFWWGLRGAATLGHNKN*HPHSSC
Trigger: ACAGGAGCTATGGGGATGCCAGTTTTTGTTATGACC...GAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CCA 90 bp CCCGTGTTTAGACATGCTGCATTCAGCTCCATCCAAGGAAGGTCTGTACAGCTGGCCACAACGTTCCACTaGTTCTCCCAAGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PVFRHAAFSSIQGRSVQLATTFH*FSQGSS
Trigger: GCTGGACCCTTGGGAGAACCAGTGGAACGTTGTGGC...CAGCTGTACAGACCTTCCTTGGATGGAGCTGAATGCAGCATGTCTAAACACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR TCA 90 bp TCCCATTCTGCATATGAGGAAGGTACAGAAGATACACTGCAGCCCGTGAACCAGGGAATTGGTTCGCAGTaGGAGGAGGGGACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SHSAYEEGTEDTLQPVNQGIGSQ*EEGTRH
Trigger: ATGCCGAGTCCCCTCCTCTCACTGCGAACCAATTCC...CTGGTTCACGGGCTGCAGTGTATCTTCTGTACCTTCCTCATATGCAGAATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp CGTGCCTCTAAGAGTGTAGCATTCTGGGGGTACATCTGTGCAGGGACAGGGGGCACCTCGGCGAAGTGCTaGTATAAATACTTCTTCGAC +
Preference number: 4 (lower is better)
Translates to: RASKSVAFWGYICAGTGGTSAKC*YKYFFD
Trigger: GTCGAAGAAGTATTTATACCAGCACTTCGCCGAGGT...GCCCCCTGTCCCTGCACAGATGTACCCCCAGAATGCTACACTCTTAGAGGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CCA 90 bp TCCTCACTGTCTGCCCTGCTCTGCCACATCTATTTTACCATGCTGGGATGCCCCCATCTTTGCCCTCTGTaGTCACCATCTTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: SSLSALLCHIYFTMLGCPHLCPL*SPSSSI
Trigger: GATCGAGGAAGATGGTGACCACAGAGGGCAAAGATG...GGGGCATCCCAGCATGGTAAAATAGATGTGGCAGAGCAGGGCAGACAGTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp TTGCATTCTGAGCAGCCCAAGCATCGCTGCCAGGCCATGGCTCCTTTAGCTGTACATCTTTGCCCTCTGTaGTCACCATCTTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: LHSEQPKHRCQAMAPLAVHLCPL*SPSSSI
Trigger: GATCGAGGAAGATGGTGACCACAGAGGGCAAAGATG...TACAGCTAAAGGAGCCATGGCCTGGCAGCGATGCTTGGGCTGCTCAGAATGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR TCA 90 bp TTGGATGTACCTGTCGGGAATAAGCCTGGGACTACTCCCAGTTCCTGCCTCCCCTCCTGTGCCTTGATCTaGTTCCAGAAGAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: LDVPVGNKPGTTPSSCLPSCALI*FQKNCS
Trigger: GGAACAATTCTTCTGGAATCAGATCAAGGCACAGGA...GGGGAGGCAGGAACTGGGAGTAGTCCCAGGCTTATTCCCGACAGGTACATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp AACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCTGTCCAAATGGAATCTCACTGTTACCACAGCATaGCAAGCCAGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: NTFNASDGWQEGLSKWNLTVTTA*QASCSG
Trigger: TCCACTGCAGCTGGCTTGTCATGCTGTGGTAACAGT...GAGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp GCCCCAATAGTAGACATTTCTAAGAGGCCTTCCCGAGTGTCAGAACACCTTCAAGCCCGCTCTCTCCATTaGTCTTGGCTGGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: APIVDISKRPSRVSEHLQARSLH*SWLGSY
Trigger: GTATGACCCCAGCCAAGATCAATGGAGAGAGCGGGC...TTGAAGGTGTTCTGACACTCGGGAAGGCCTCTTAGAAATGTCTACTATTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp TGGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGGTCATTATGGATGCTaGCCAGAGCATAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: WCQWLWFDRVLLSCEGEVGHYGC*PEHRAL
Trigger: GAGAGCTCTATGCTCTGGGCAGCATCCATAATGACC...AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp AGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCACTGCAACAGTTTGTTaGTTAATCGATCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: RWVNRKRFWWGLRGAATLTATVC*LIDQAL
Trigger: AAGAGCCTGATCGATTAAGCAACAAACTGTTGCAGT...GAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp TGGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTAAAGCAGAAGGCTGGTaGTCTCCATGCCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: WCQWLWFDRVLLSCEGEVKAEGW*SPCHSE
Trigger: TTCGCTATGGCATGGAGACCACCAGCCTTCTGCTTT...AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp CGTGCCTCTAAGAGTGTAGCATTCTGGGGGTACATCTGTGCAGGGACAGGGGGCTCTCCTCTTCTGCTATaGGCACTACATCAATCATTT +
Preference number: 4 (lower is better)
Translates to: RASKSVAFWGYICAGTGGSPLLL*ALHQSF
Trigger: AAATGATTGATGTAGTGCTCATAGCAGAAGAGGAGA...GCCCCCTGTCCCTGCACAGATGTACCCCCAGAATGCTACACTCTTAGAGGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGAGTGCCAGAAGCTGGTaGGCTTCGATGTCAAGTATT +
Preference number: 4 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGSARSW*ASMSSI
Trigger: AATACTTGACATCGAAGCTCACCAGCTTCTGGCACT...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp GAATCTCTAACAATGGTTCTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAAGCATCGTGTTCCTTCTaGGGGCCTGTCTTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: ESLTMVLREGSVGRFESQASCSF*GPVLER
Trigger: CCTTTCTAAGACAGGCCCTCAGAAGGAACACGATGC...TTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAGAACCATTGTTAGAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp TTGGATGTACCTGTCGGGAATAAGCCTGGGACTACTCCCAGTTCCTGCCTCCCCATAGCTCCTGTGCCTTaGTCTGATTCCAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: LDVPVGNKPGTTPSSCLPIAPVP*SDSRRI
Trigger: AATTCTTCTGGAATCAGATCAAGGCACAGGAGCTAT...GGGGAGGCAGGAACTGGGAGTAGTCCCAGGCTTATTCCCGACAGGTACATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp GGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATACTGCAACAGTTTGTTaGTTAATCGATCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GEQEEILVGTQGSSDPPYTATVC*LIDQAL
Trigger: AAGAGCCTGATCGATTAAGCAACAAACTGTTGCAGT...ATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGAACCTCATGTCGATCTaGTCCATGAAATCCACCGCA +
Preference number: 4 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGNLMSI*SMKSTA
Trigger: TGCGGTGGATTTCATGGAGCAGATCGACATGAGGTT...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp CGGTTTGAATCACAAATAGGAAAAGGCAGCCGAGAAGCCCCAGCACTGAAAGTGTGCAAAGCAGAAGGCTaGTGGTCTCCATGCCATAGC +
Preference number: 4 (lower is better)
Translates to: RFESQIGKGSREAPALKVCKAEG*WSPCHS
Trigger: GCTATGGCATGGAGACCACCAGCCTTCTGCTTTGCA...CACTTTCAGTGCTGGGGCTTCTCGGCTGCCTTTTCCTATTTGTGATTCAAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp TCCCATTCTGCATATGAGGAAGGTACAGAAGATACACTGCAGCCCGTGAACCAGGAACGTTGGCGTTATTaGTCTCCAGGACAGCACTGT +
Preference number: 4 (lower is better)
Translates to: SHSAYEEGTEDTLQPVNQERWRY*SPGQHC
Trigger: ACAGTGCTGTCCTGGAGATCAATAACGCCAACGTTC...CTGGTTCACGGGCTGCAGTGTATCTTCTGTACCTTCCTCATATGCAGAATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp GCCTTCCCGAGTGTCAGAACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCCTCGAAATTCAGCTGTaGATAACTTTTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: AFPSVRTPSMPVTGGRKVLEIQL*ITFPKT
Trigger: AGTTTTGGGAAAAGTTATGCACAGCTGAATTTCGAG...GACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTTCTGACACTCGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp ATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGGAACTTGGAGAGTGCACATTGAGAGGTCATTATGGATaGTGCCCAGAGCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: IESSSPVKERLELGECTLRGHYG*CPEHRA
Trigger: AGCTCTATGCTCTGGGCAGCATCCATAATGACCTCT...CAATGTGCACTCTCCAAGTTCCAACCTCTCCTTCACAGGAGAGGAGGACTCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp CCCGTGTTTAGACATGCTGCATTCAGCTCCATCCAAGGAAGGTCTGTACAGCTGAACCTCATGTCGATCTaGTCCATGAAATCCACCGCA +
Preference number: 4 (lower is better)
Translates to: PVFRHAAFSSIQGRSVQLNLMSI*SMKSTA
Trigger: TGCGGTGGATTTCATGGAGCAGATCGACATGAGGTT...CAGCTGTACAGACCTTCCTTGGATGGAGCTGAATGCAGCATGTCTAAACACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp TTGCATTCTGAGCAGCCCAAGCATCGCTGCCAGGCCATGGCTCCTTTAGCTGTAAAGTTCAAGCTATGCTaGTGTTTCCCCTTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LHSEQPKHRCQAMAPLAVKFKLC*CFPLVL
Trigger: CAAGACTAAGGGGAAACACCAGCATAGCTTGAACTT...TACAGCTAAAGGAGCCATGGCCTGGCAGCGATGCTTGGGCTGCTCAGAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp ATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTCTGGGAAGATCCCAGAGTGCGTTTCCAGTTGTCTTaGTCTACTGAGTACTTATCA +
Preference number: 4 (lower is better)
Translates to: IKSCVCAGSAGLWEDPRVRFQLS*STEYLS
Trigger: TGATAAGTACTCAGTAGATCAAGACAACTGGAAACG...CACTCTGGGATCTTCCCAGAGGCCAGCAGACCCTGCACAGACACAGCTCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp TGGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTATATTCTTGCTCTTTTaGCTAGAGAGCCTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: WCQWLWFDRVLLSCEGEVIFLLF*LESLVA
Trigger: TGCCACTAGGCTCTCTAGGCAAAAGAGCAAGAATAT...AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CCA 90 bp ACTTGGAGAGTGCACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTTCTGTGCGCAAAGCTTaGTTATGGTTTACCCATCTC +
Preference number: 4 (lower is better)
Translates to: TWRVHIDKELCLCRVCWPSVRKA*LWFTHL
Trigger: GAGATGGGTAAACCATAACCAAGCTTTGCGCACAGA...AGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CCA 90 bp ACTTGGAGAGTGCACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTTCCATTGATCTTGGCTaGGGTCATACTGCAACAGTT +
Preference number: 4 (lower is better)
Translates to: TWRVHIDKELCLCRVCWPSIDLG*GHTATV
Trigger: AACTGTTGCAGTATGACCCCAGCCAAGATCAATGGA...AGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTCAGCACTGGTGGAATTaGTTCGCAGTGAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVQHWWN*FAVRGG
Trigger: CCCTCCTCTCACTGCGAACCAATTCCACCAGTGCTG...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
3UTR CAA 72 bp GGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTaGGAACTTGGAGAGTGCACATTGATAAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLIESSSPVKER*ELGECTLIKSC
Trigger: ACAGCTCTTTATCAATGTGCACTCTCCAAGTTCCAACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp TCCCATTCTGCATATGAGGAAGGTACAGAAGATACACTGCAGCCCGTGAACCAGAAGAATTGTTCCCAATaGAAAGCAGAAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SHSAYEEGTEDTLQPVNQKNCSQ*KAEGWW
Trigger: CCACCAGCCTTCTGCTTTGCATTGGGAACAATTCTT...CTGGTTCACGGGCTGCAGTGTATCTTCTGTACCTTCCTCATATGCAGAATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp TGGTGTCAGTGGCTCTGGTTTGATCGAGTCCTCCTCTCCTGTGAAGGAGAGGTTGTTGTCTTGATCTACTaGGTACTTATCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: WCQWLWFDRVLLSCEGEVVVLIY*VLINTV
Trigger: AACTGTGTTGATAAGTACTCAGTAGATCAAGACAAC...AACCTCTCCTTCACAGGAGAGGAGGACTCGATCAAACCAGAGCCACTGACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp ATGCTCCTTCCTCTTTCAGGCATTGGACACCTAGTTGTTACCTTTCTCTCAGCAACTGTTGACGACGGCTaGACTGAATCGGTACTTAGA +
Preference number: 4 (lower is better)
Translates to: MLLPLSGIGHLVVTFLSATVDDG*TESVLR
Trigger: TCTAAGTACCGATTCAGTGCAGCCGTCGTCAACAGT...TGCTGAGAGAAAGGTAACAACTAGGTGTCCAATGCCTGAAAGAGGAAGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp GCCAATATGCCTCTTCCCTCCTCATTCACAGCCTACTGTGGGTTCCCGTGTTTAAGTAATAAATTCCTATaGAGTTGGAGGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: ANMPLPSSFTAYCGFPCLSNKFL*SWRHPC
Trigger: ACATGGATGCCTCCAACTGCATAGGAATTTATTACT...TAAACACGGGAACCCACAGTAGGCTGTGAATGAGGAGGGAAGAGGCATATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp ACTTGGAGAGTGCACATTGATAAAGAGCTGTGTCTGTGCAGGGTCTGCTGGCCTGAACCAAATCCAGAATaGTCTCTTCTCTGGATATAT +
Preference number: 4 (lower is better)
Translates to: TWRVHIDKELCLCRVCWPEPNPE*SLLWIY
Trigger: ATATATCCAGAGAAGAGAGCATTCTGGATTTGGTTC...AGGCCAGCAGACCCTGCACAGACACAGCTCTTTATCAATGTGCACTCTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp CAGGCCTATGCTCCTTCCTCTTTCAGGCATTGGACACCTAGTTGTTACCTTTCTAGTTCCAGTCTGACTTaGTTCAAAAGCTCAACGAGA +
Preference number: 4 (lower is better)
Translates to: QAYAPSSFRHWTPSCYLSSSSLT*FKSSTR
Trigger: TCTCGTTGAGCTTTTGAAGCAAGTCAGACTGGAACT...AGAAAGGTAACAACTAGGTGTCCAATGCCTGAAAGAGGAAGGAGCATAGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CCA 90 bp AACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCTGTCCAAATGGAATCTCGAATGCTCTCTTCTCTaGATATATTCAGATCATCAG +
Preference number: 4 (lower is better)
Translates to: NTFNASDGWQEGLSKWNLECSLL*IYSDHQ
Trigger: CTGATGATCTGAATATATCCAGAGAAGAGAGCATTC...GAGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp ATGCTCCTTCCTCTTTCAGGCATTGGACACCTAGTTGTTACCTTTCTCTCAGCATGGCTGGGGTCATACTaGAACAGTTTGTTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: MLLPLSGIGHLVVTFLSAWLGSY*NSLLLN
Trigger: ATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCA...TGCTGAGAGAAAGGTAACAACTAGGTGTCCAATGCCTGAAAGAGGAAGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CCA 90 bp CCACACTGCTTACATGGAAGCTTTTGTGATGTTAGAGAACAGTCACGTAATGGAAAATTCCTATGCAGTTaGAGGCATCCATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PHCLHGSFCDVREQSRNGKFLCS*RHPCGP
Trigger: TGGACCACATGGATGCCTCCAACTGCATAGGAATTT...TCCATTACGTGACTGTTCTCTAACATCACAAAAGCTTCCATGTAAGCAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp CCACACTGCTTACATGGAAGCTTTTGTGATGTTAGAGAACAGTCACGTAATGGACTTACCTCGGCGAAGTaGTGGTATAAATACTTCTTC +
Preference number: 4 (lower is better)
Translates to: PHCLHGSFCDVREQSRNGLTSAK*WYKYFF
Trigger: GAAGAAGTATTTATACCAGCACTTCGCCGAGGTAAG...TCCATTACGTGACTGTTCTCTAACATCACAAAAGCTTCCATGTAAGCAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp CCACACTGCTTACATGGAAGCTTTTGTGATGTTAGAGAACAGTCACGTAATGGATGGCTGGGGTCATACTaGAACAGTTTGTTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: PHCLHGSFCDVREQSRNGWLGSY*NSLLLN
Trigger: ATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCA...TCCATTACGTGACTGTTCTCTAACATCACAAAAGCTTCCATGTAAGCAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR GCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTGAATTTCTCCTCTTCTaGTATGAGCACTACATCAAT +
Preference number: 4 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVEFLLF*YEHYIN
Trigger: ATTGATGTAGTGCTCATAGCAGAAGAGGAGAAATTC...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp ATCCAGTGTTTTCACACTCAATCCACACACCAACTCTGTAAAGAGTGTGGGGTTTCTGGATTATATCAATaGAACTGCCATCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: IQCFHTQSTHQLCKECGVSGLYQ*NCHHKG
Trigger: TCCTTTGTGATGGCAGTTGCATTGATATAATCCAGA...AACCCCACACTCTTTACAGAGTTGGTGTGTGGATTGAGTGTGAAAACACTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR TCA 90 bp CCACACTGCTTACATGGAAGCTTTTGTGATGTTAGAGAACAGTCACGTAATGGAAAAATAGGTCTTGTGTaGCACAGGGTCATAACAAAA +
Preference number: 4 (lower is better)
Translates to: PHCLHGSFCDVREQSRNGKIGLV*HRVITK
Trigger: TTTTGTTATGACCCTGTGTCACACAAGACCTATTTT...TCCATTACGTGACTGTTCTCTAACATCACAAAAGCTTCCATGTAAGCAGTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR GCA 90 bp CCACACTGCTTACATGGAAGCTTTTGTGATGTTAGAGAACAGTCACGTAATGGACTCGAAATTCAGCTGTaGATAACTTTTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: PHCLHGSFCDVREQSRNGLEIQL*ITFPKT
Trigger: AGTTTTGGGAAAAGTTATGCACAGCTGAATTTCGAG...TCCATTACGTGACTGTTCTCTAACATCACAAAAGCTTCCATGTAAGCAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS TCA 90 bp GAGCTTCCCGTCCACGGCGCCAGCACTGGTGGAATTGGTTCGCAGTaGGAGGAGGGGACTCGGCATAGGCGGGCCTTCCCTCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: ELPVHGASTGGIGSQ*EEGTRHRRAFPPEV
Trigger: GACTTCTGGAGGGAAGGCCCGCCTATGCCGAGTCCCCTCCTCTCACTGCGAACCAATTCCACCAGTGCTGGCGCCGTGGACGGGAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CAA 90 bp AGGTGGGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCTCGTGCATGAGGACATaGATGGCCACAACGTTCCAC +
Preference number: 5 (lower is better)
Translates to: RWVNRKRFWWGLRGAATLSCMRT*MATTFH
Trigger: GTGGAACGTTGTGGCCATCAATGTCCTCATGCACGA...GAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 90 bp TTGCCCTCTGTGGTCACCATCTTCCTCGATCAGATCAGAGGGTGGTaGGATGAGGTCTCGGGGGTTCATCCTAGCTACCAGACAGACGTC +
Preference number: 5 (lower is better)
Translates to: LPSVVTIFLDQIRGW*DEVSGVHPSYQTDV
Trigger: GACGTCTGTCTGGTAGCTAGGATGAACCCCCGAGACCTCATCCCACCACCCTCTGATCTGATCGAGGAAGATGGTGACCACAGAGGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CAA 90 bp AGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATAGAGCTTCTGCCTTGCTGCTGGGGTGTCTaGATGGCTTTGAACGCATTC +
Preference number: 5 (lower is better)
Translates to: RFWWGLRGAATLPIELLPCCWGV*MALNAF
Trigger: GAATGCGTTCAAAGCCATCAAGACACCCCAGCAGCA...AGGCAGAAGCTCTATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp TCCTCACTGTCTGCCCTGCTCTGCCACATCTATTTTACCATGCTGGGATGCCCCCCAGCACTGGTGGAATaGGTTCGCAGTGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SSLSALLCHIYFTMLGCPPALVE*VRSERR
Trigger: CCTCCTCTCACTGCGAACCAATTCCACCAGTGCTGG...GGGGCATCCCAGCATGGTAAAATAGATGTGGCAGAGCAGGGCAGACAGTGAGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS GCA 90 bp GTTGACGACGGCTGCACTGAATCGGTACTTAGAGTACCGCATGGGTaGCCGCTCTCTCCATTGATCTTGGCTGGGGTCATACTGCAACAG +
Preference number: 5 (lower is better)
Translates to: VDDGCTESVLRVPHG*PLSPLILAGVILQQ
Trigger: CTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGAGAGCGGGCACCCATGCGGTACTCTAAGTACCGATTCAGTGCAGCCGTCGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 90 bp TCTTTGCCCTCTGTGGTCACCATCTTCCTCGATCAGATCAGAGGGTaGTGGGATGAGGTCTCGGGGGTTCATCCTAGCTACCAGACAGAC +
Preference number: 5 (lower is better)
Translates to: SLPSVVTIFLDQIRG*WDEVSGVHPSYQTD
Trigger: GTCTGTCTGGTAGCTAGGATGAACCCCCGAGACCTCATCCCACCACCCTCTGATCTGATCGAGGAAGATGGTGACCACAGAGGGCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CAA 90 bp GGTGAACAGGAAGAGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATCTCTCTCCATTGATCTaGGCTGGGGTCATACTGCAA +
Preference number: 5 (lower is better)
Translates to: GEQEEILVGTQGSSDPPYLSPLI*AGVILQ
Trigger: TTGCAGTATGACCCCAGCCAAGATCAATGGAGAGAG...ATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCTCTTCCTGTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CAA 90 bp GGGACTACTCCCAGTTCCTGCCTCCCCTCTGGTGCTGAGGCAGTTCTGTGTCCGGGTGTCTTGATGGCTTaGAACGCATTCTGGATTATA +
Preference number: 5 (lower is better)
Translates to: GTTPSSCLPSGAEAVLCPGVLMA*NAFWII
Trigger: TATAATCCAGAATGCGTTCAAAGCCATCAAGACACC...CGGACACAGAACTGCCTCAGCACCAGAGGGGAGGCAGGAACTGGGAGTAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp CTGAGGCAGTTCTGTGTCCGCTCCAGGGAGACCAGTCGCTCTCCTTTGTCCTCCAGCTCCAGAATCTCTTaGGAGATAACCTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: LRQFCVRSRETSRSPLSSSSRIS*EITSCR
Trigger: TCGACATGAGGTTATCTCCAAAGAGATTCTGGAGCT...GGAGGACAAAGGAGAGCGACTGGTCTCCCTGGAGCGGACACAGAACTGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS GCA 90 bp ACAGCCAATTCCACCCAGAACATAGATCTCACTGTTGACGACGGCTaGACTGAATCGGTACTTAGAGTACCGCATGGGTGCCCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: TANSTQNIDLTVDDG*TESVLRVPHGCPLS
Trigger: AGAGAGCGGGCACCCATGCGGTACTCTAAGTACCGATTCAGTGCAGCCGTCGTCAACAGTGAGATCTATGTTCTGGGTGGAATTGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CAA 90 bp AGATTCTGGTGGGGACTCAGGGGAGCAGCGACCCTCCCTATAGAGCTTCTGCCTAATATTCTTGCTCTTTaGCCTAGAGAGCCTAGTGGC +
Preference number: 5 (lower is better)
Translates to: RFWWGLRGAATLPIELLPNILAL*PREPSG
Trigger: GCCACTAGGCTCTCTAGGCAAAAGAGCAAGAATATT...AGGCAGAAGCTCTATAGGGAGGGTCGCTGCTCCCCTGAGTCCCCACCAGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp CGGTTTGAATCACAAATAGGAAAAGGCAGCCGAGAAGCCCCAGCACTGAAAGTGCCAGCACTGGTGGAATaGGTTCGCAGTGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RFESQIGKGSREAPALKVPALVE*VRSERR
Trigger: CCTCCTCTCACTGCGAACCAATTCCACCAGTGCTGG...CACTTTCAGTGCTGGGGCTTCTCGGCTGCCTTTTCCTATTTGTGATTCAAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CAA 90 bp TCCTCACTGTCTGCCCTGCTCTGCCACATCTATTTTACCATGCTGGGATGCCCCCTCTGTGCGCAAAGCTaGGTTATGGTTTACCCATCT +
Preference number: 5 (lower is better)
Translates to: SSLSALLCHIYFTMLGCPLCAQS*VMVYPS
Trigger: AGATGGGTAAACCATAACCAAGCTTTGCGCACAGAG...GGGGCATCCCAGCATGGTAAAATAGATGTGGCAGAGCAGGGCAGACAGTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp ACATCTGTGCAGGGACAGGGGGCAGAACACCTTGGTGTCAGTGGCTCTGGTTTGAAGTTCCAGTCTGACTaGCTTCAAAAGCTCAACGAG +
Preference number: 5 (lower is better)
Translates to: TSVQGQGAEHLGVSGSGLKFQSD*LQKLNE
Trigger: CTCGTTGAGCTTTTGAAGCAAGTCAGACTGGAACTT...CAAACCAGAGCCACTGACACCAAGGTGTTCTGCCCCCTGTCCCTGCACAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp TCTGGGTTCTGGATGCAGAAGGGACTTCACGGCAGGCGTCTGAGACCTTGGATGAGCTCCAGAATCTCTTaGGAGATAACCTCATGTCGA +
Preference number: 5 (lower is better)
Translates to: SGFWMQKGLHGRRLRPWMSSRIS*EITSCR
Trigger: TCGACATGAGGTTATCTCCAAAGAGATTCTGGAGCT...CATCCAAGGTCTCAGACGCCTGCCGTGAAGTCCCTTCTGCATCCAGAACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CAA 90 bp AACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCTGTCCAAATGGAATCTCCTCTCTCCATTGATCTaGGCTGGGGTCATACTGCAA +
Preference number: 5 (lower is better)
Translates to: NTFNASDGWQEGLSKWNLLSPLI*AGVILQ
Trigger: TTGCAGTATGACCCCAGCCAAGATCAATGGAGAGAG...GAGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS-3UTR CAA 90 bp GAATCTCTAACAATGGTTCTCCGGGAGGGCAGCGTAGGTCGGTTTGAATCACAATCGTGCATGAGGACATaGATGGCCACAACGTTCCAC +
Preference number: 5 (lower is better)
Translates to: ESLTMVLREGSVGRFESQSCMRT*MATTFH
Trigger: GTGGAACGTTGTGGCCATCAATGTCCTCATGCACGA...TTGTGATTCAAACCGACCTACGCTGCCCTCCCGGAGAACCATTGTTAGAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS TCA 90 bp CTGAATCGGTACTTAGAGTACCGCATGGGTGCCCGCTCTCTCCATTaGTCTTGGCTGGGGTCATACTGCAACAGTTTGTTGCTTAATCGA +
Preference number: 5 (lower is better)
Translates to: LNRYLEYRMGARSLH*SWLGSYCNSLLLNR
Trigger: TCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGAGAGCGGGCACCCATGCGGTACTCTAAGTACCGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS GCA 90 bp GCTCTCTCCATTGATCTTGGCTGGGGTCATACTGCAACAGTTTGTTaGTTAATCGATCAGGCTCTTCGTCAGGAAGATCCATCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: ALSIDLGWGHTATVC*LIDQALRQEDPSEG
Trigger: CCCCTCAGATGGATCTTCCTGACGAAGAGCCTGATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 90 bp CAGCCTCCGATGACATACAGTTTATTGTTCACTGTTACCACAGCATaGCAAGCCAGCTGCAGTGGAAGGGGAGATACTCGTTTCCAGTTG +
Preference number: 5 (lower is better)
Translates to: QPPMTYSLLFTVTTA*QASCSGRGDTRFQL
Trigger: CAACTGGAAACGAGTATCTCCCCTTCCACTGCAGCTGGCTTGTCATGCTGTGGTAACAGTGAACAATAAACTGTATGTCATCGGAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS GCA 90 bp GCTCTCTCCATTGATCTTGGCTGGGGTCATACTGCAACAGTTTGTTaGTTAATCGATCAGGCTCTTCGTCAGGAAGATCCATCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: ALSIDLGWGHTATVC*LIDQALRQEDPSRA
Trigger: TGCTCTGGATGGATCTTCCTGACGAAGAGCCTGATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184878.7
CDS CCA 90 bp TTGGAGGGGTGCTGCTGGGGTGTCTTGATGGCTTTGAACGCATTCTaGATTATATCAATGCAACTGCCATCACAAAGGAGCATCGTGTTC +
Preference number: 5 (lower is better)
Translates to: LEGCCWGVLMALNAF*IISMQLPSQRSIVF
Trigger: GAACACGATGCTCCTTTGTGATGGCAGTTGCATTGATATAATCCAGAATGCGTTCAAAGCCATCAAGACACCCCAGCAGCACCCCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp GGTGGCAGGAAGGTCTGTCCAAATGGAATCTCTAACAATGGTTCTCCGGGAGGGTCATACTGCAACAGTTaGTTGCTTAATCGATCAGGC +
Preference number: 5 (lower is better)
Translates to: GGRKVCPNGISNNGSPGGSYCNS*LLNRSG
Trigger: GCCTGATCGATTAAGCAACAAACTGTTGCAGTATGA...CCCTCCCGGAGAACCATTGTTAGAGATTCCATTTGGACAGACCTTCCTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS TCA 90 bp GGTCATAACAAAAACTGGCATCCCCATAGCTCCTGTGCCTTGATCTaGTTCCAGAAGAATTGTTCCCAATGCAAAGCAGAAGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GHNKNWHPHSSCALI*FQKNCSQCKAEGWW
Trigger: CCACCAGCCTTCTGCTTTGCATTGGGAACAATTCTTCTGGAATCAGATCAAGGCACAGGAGCTATGGGGATGCCAGTTTTTGTTATGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 90 bp CACAGGGTCATAACAAAAACTGGCATCCCCATAGCTCCTGTGCCTTaGTCTGATTCCAGAAGAATTGTTCCCAATGCAAAGCAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: HRVITKTGIPIAPVP*SDSRRIVPNAKQKA
Trigger: AGCCTTCTGCTTTGCATTGGGAACAATTCTTCTGGAATCAGATCAAGGCACAGGAGCTATGGGGATGCCAGTTTTTGTTATGACCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp AACACCTTCAATGCCAGTGACGGGTGGCAGGAAGGTCTGTCCAAATGGAATCTCGTCCATCATATAGTTTaGGCACACACTAAAGACTTC +
Preference number: 5 (lower is better)
Translates to: NTFNASDGWQEGLSKWNLVHHIV*AHTKDF
Trigger: GAAGTCTTTAGTGTGTGCCAAAACTATATGATGGAC...GAGATTCCATTTGGACAGACCTTCCTGCCACCCGTCACTGGCATTGAAGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp CGGTTTGAATCACAAATAGGAAAAGGCAGCCGAGAAGCCCCAGCACTGAAAGTGTCATACTGCAACAGTTaGTTGCTTAATCGATCAGGC +
Preference number: 5 (lower is better)
Translates to: RFESQIGKGSREAPALKVSYCNS*LLNRSG
Trigger: GCCTGATCGATTAAGCAACAAACTGTTGCAGTATGA...CACTTTCAGTGCTGGGGCTTCTCGGCTGCCTTTTCCTATTTGTGATTCAAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS TCA 90 bp CAAGCCAGCTGCAGTGGAAGGGGAGATACTCGTTTCCAGTTGTCTTaGTCTACTGAGTACTTATCAACACAGTTTGTTATGAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: QASCSGRGDTRFQLS*STEYLSTQFVMRYW
Trigger: CCAGTACCTCATAACAAACTGTGTTGATAAGTACTCAGTAGATCAAGACAACTGGAAACGAGTATCTCCCCTTCCACTGCAGCTGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS GCA 90 bp GCGTTTATAAGTTCCAGTCTGACTTGCTTCAAAAGCTCAACGAGATaGTCTGTGCGCAAAGCTTGGTTATGGTTTACCCATCTCAGAACC +
Preference number: 5 (lower is better)
Translates to: AFISSSLTCFKSSTR*SVRKAWLWFTHLRT
Trigger: GGTTCTGAGATGGGTAAACCATAACCAAGCTTTGCGCACAGAGCATCTCGTTGAGCTTTTGAAGCAAGTCAGACTGGAACTTATAAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp GCCCCAATAGTAGACATTTCTAAGAGGCCTTCCCGAGTGTCAGAACACCTTCAAGCCACAATTACAGTATaGTTTTCCATGACTACCCCA +
Preference number: 5 (lower is better)
Translates to: APIVDISKRPSRVSEHLQATITV*FSMTTP
Trigger: TGGGGTAGTCATGGAAAACAATACTGTAATTGTGGC...TTGAAGGTGTTCTGACACTCGGGAAGGCCTCTTAGAAATGTCTACTATTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS-3UTR CAA 90 bp GCCCCAATAGTAGACATTTCTAAGAGGCCTTCCCGAGTGTCAGAACACCTTCAATACTGCAACAGTTTGTaGCTTAATCGATCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: APIVDISKRPSRVSEHLQYCNSL*LNRSGS
Trigger: AGAGCCTGATCGATTAAGCAACAAACTGTTGCAGTA...TTGAAGGTGTTCTGACACTCGGGAAGGCCTCTTAGAAATGTCTACTATTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS TCA 90 bp CTGCAGTGGAAGGGGAGATACTCGTTTCCAGTTGTCTTGATCTACTaGGTACTTATCAACACAGTTTGTTATGAGGTACTGGTTTTTAAT +
Preference number: 5 (lower is better)
Translates to: LQWKGRYSFPVVLIY*VLINTVCYEVLVFN
Trigger: ATTAAAAACCAGTACCTCATAACAAACTGTGTTGATAAGTACTCAGTAGATCAAGACAACTGGAAACGAGTATCTCCCCTTCCACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS GCA 90 bp AATGCTCTCTTCTCTGGATATATTCAGATCATCAGACTTAATAAGTaGCAGAAGCTGGTGAGCTTCGATGTCAAGTATTTCTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: NALFSGYIQIIRLNK*QKLVSFDVKYFSMK
Trigger: CTTCATGGAGAAATACTTGACATCGAAGCTCACCAGCTTCTGGCACTTATTAAGTCTGATGATCTGAATATATCCAGAGAAGAGAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS GCA 90 bp ATAAATCTTCTGCTCCGATTTGTTTTGCAAAGTAATAAATTCCTATaGAGTTGGAGGCATCCATGTGGTCCATCATATAGTTTTGGCACA +
Preference number: 5 (lower is better)
Translates to: INLLLRFVLQSNKFL*SWRHPCGPSYSFGT
Trigger: TGTGCCAAAACTATATGATGGACCACATGGATGCCTCCAACTGCATAGGAATTTATTACTTTGCAAAACAAATCGGAGCAGAAGATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 72 bp GTCCACGGCGCCAGCACTGGTGGAATTGGTTCGCAGTaGGAGGAGGGGACTCGGCATAGGCGGGCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: VHGASTGGIGSQ*EEGTRHRRAFP
Trigger: AGGGAAGGCCCGCCTATGCCGAGTCCCCTCCTCTCACTGCGAACCAATTCCACCAGTGCTGGCGCCGTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 72 bp CGCAGACATAGAGCTTCCCGTCCACGGCGCCAGCACTaGTGGAATTGGTTCGCAGTGAGAGGAGGGGACTCG +
Preference number: 6 (lower is better)
Translates to: RRHRASRPRRQH*WNWFAVRGGDS
Trigger: CGAGTCCCCTCCTCTCACTGCGAACCAATTCCACCAGTGCTGGCGCCGTGGACGGGAAGCTCTATGTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 72 bp AGACATAGAGCTTCCCGTCCACGGCGCCAGCACTGGTaGAATTGGTTCGCAGTGAGAGGAGGGGACTCGGCA +
Preference number: 6 (lower is better)
Translates to: RHRASRPRRQHW*NWFAVRGGDSA
Trigger: TGCCGAGTCCCCTCCTCTCACTGCGAACCAATTCCACCAGTGCTGGCGCCGTGGACGGGAAGCTCTATGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 72 bp GTGGTCACCATCTTCCTCGATCAGATCAGAGGGTGGTaGGATGAGGTCTCGGGGGTTCATCCTAGCTACCAG +
Preference number: 6 (lower is better)
Translates to: VVTIFLDQIRGW*DEVSGVHPSYQ
Trigger: CTGGTAGCTAGGATGAACCCCCGAGACCTCATCCCACCACCCTCTGATCTGATCGAGGAAGATGGTGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS GCA 72 bp GGCTGCACTGAATCGGTACTTAGAGTACCGCATGGGTaGCCGCTCTCTCCATTGATCTTGGCTGGGGTCATA +
Preference number: 6 (lower is better)
Translates to: GCTESVLRVPHG*PLSPLILAGVI
Trigger: TATGACCCCAGCCAAGATCAATGGAGAGAGCGGGCACCCATGCGGTACTCTAAGTACCGATTCAGTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 72 bp TCTGTGGTCACCATCTTCCTCGATCAGATCAGAGGGTaGTGGGATGAGGTCTCGGGGGTTCATCCTAGCTAC +
Preference number: 6 (lower is better)
Translates to: SVVTIFLDQIRG*WDEVSGVHPSY
Trigger: GTAGCTAGGATGAACCCCCGAGACCTCATCCCACCACCCTCTGATCTGATCGAGGAAGATGGTGACCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CAA 90 bp CCCATCGGGGTTGTAGATCTCCACCACATCAAGGCATTTCCGAACTaGTCCCTTGTCTCGGCCCACACAGCCAATTCCACCCAGAACATA +
Preference number: 6 (lower is better)
Translates to: PIGVVDLHHIKAFPN*SLVSAHTANSTQNI
Trigger: TATGTTCTGGGTGGAATTGGCTGTGTGGGCCGAGACAAGGGACAAGTTCGGAAATGCCTTGATGTGGTGGAGATCTACAACCCCGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS GCA 72 bp TCCACCCAGAACATAGATCTCACTGTTGACGACGGCTaGACTGAATCGGTACTTAGAGTACCGCATGGGTGC +
Preference number: 6 (lower is better)
Translates to: STQNIDLTVDDG*TESVLRVPHGC
Trigger: GCACCCATGCGGTACTCTAAGTACCGATTCAGTGCAGCCGTCGTCAACAGTGAGATCTATGTTCTGGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 72 bp TCGTGCATGAGGACATTGATGGCCACAACGTTCCACTaGTTCTCCCAAGGGTCCAGCTCCAGAATCTCTTTG +
Preference number: 6 (lower is better)
Translates to: SCMRTLMATTFH*FSQGSSSRISL
Trigger: CAAAGAGATTCTGGAGCTGGACCCTTGGGAGAACCAGTGGAACGTTGTGGCCATCAATGTCCTCATGCACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CAA 72 bp ATCTCCACCACATCAAGGCATTTCCGAACTTGTCCCTaGTCTCGGCCCACACAGCCAATTCCACCCAGAACA +
Preference number: 6 (lower is better)
Translates to: ISTTSRHFRTCP*SRPTQPIPPRT
Trigger: TGTTCTGGGTGGAATTGGCTGTGTGGGCCGAGACAAGGGACAAGTTCGGAAATGCCTTGATGTGGTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CAA 72 bp GTTGTAGATCTCCACCACATCAAGGCATTTCCGAACTaGTCCCTTGTCTCGGCCCACACAGCCAATTCCACC +
Preference number: 6 (lower is better)
Translates to: VVDLHHIKAFPN*SLVSAHTANST
Trigger: GGTGGAATTGGCTGTGTGGGCCGAGACAAGGGACAAGTTCGGAAATGCCTTGATGTGGTGGAGATCTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS TCA 72 bp TACTTAGAGTACCGCATGGGTGCCCGCTCTCTCCATTaGTCTTGGCTGGGGTCATACTGCAACAGTTTGTTG +
Preference number: 6 (lower is better)
Translates to: YLEYRMGARSLH*SWLGSYCNSLL
Trigger: CAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGAGAGCGGGCACCCATGCGGTACTCTAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 72 bp TTCCAGAAGAATTGTTCCCAATGCAAAGCAGAAGGCTaGTGGTCTCCATGCCATAGCGAAGGTTGGAGGGGT +
Preference number: 6 (lower is better)
Translates to: FQKNCSQCKAEG*WSPCHSEGWRG
Trigger: ACCCCTCCAACCTTCGCTATGGCATGGAGACCACCAGCCTTCTGCTTTGCATTGGGAACAATTCTTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS CCA 72 bp ACCGCATGGGTGCCCGCTCTCTCCATTGATCTTGGCTaGGGTCATACTGCAACAGTTTGTTGCTTAATCGAT +
Preference number: 6 (lower is better)
Translates to: TAWVPALSIDLG*GHTATVCCLID
Trigger: ATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGAGAGCGGGCACCCATGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS CCA 72 bp GTTCACTGTTACCACAGCATGACAAGCCAGCTGCAGTaGAAGGGGAGATACTCGTTTCCAGTTGTCTTGATC +
Preference number: 6 (lower is better)
Translates to: VHCYHSMTSQLQ*KGRYSFPVVLI
Trigger: GATCAAGACAACTGGAAACGAGTATCTCCCCTTCCACTGCAGCTGGCTTGTCATGCTGTGGTAACAGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS CAA 72 bp AGGTTGGAGGGGTGCTGCTGGGGTGTCTTGATGGCTTaGAACGCATTCTGGATTATATCAATGCAACTGCCA +
Preference number: 6 (lower is better)
Translates to: RLEGCCWGVLMA*NAFWIISMQLP
Trigger: TGGCAGTTGCATTGATATAATCCAGAATGCGTTCAAAGCCATCAAGACACCCCAGCAGCACCCCTCCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 72 bp CGTCAGGAAGATCCATCTGAGGGGTCCAGCCTCCGATaGCATACAGTTTATTGTTCACTGTTACCACAGCAT +
Preference number: 6 (lower is better)
Translates to: RQEDPSEGSSLR*HTVYCSLLPQH
Trigger: ATGCTGTGGTAACAGTGAACAATAAACTGTATGTCATCGGAGGCTGGACCCCTCAGATGGATCTTCCTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS CAA 72 bp CTAGTGGCAGTTGCTTCTCCAGCCACAATTACAGTATaGTTTTCCATGACTACCCCAGTGCACACAGTTCCC +
Preference number: 6 (lower is better)
Translates to: LVAVASPATITV*FSMTTPVHTVP
Trigger: GGGAACTGTGTGCACTGGGGTAGTCATGGAAAACAATACTGTAATTGTGGCTGGAGAAGCAACTGCCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS CCA 72 bp TGCTGCTGGGGTGTCTTGATGGCTTTGAACGCATTCTaGATTATATCAATGCAACTGCCATCACAAAGGAGC +
Preference number: 6 (lower is better)
Translates to: CCWGVLMALNAF*IISMQLPSQRS
Trigger: GCTCCTTTGTGATGGCAGTTGCATTGATATAATCCAGAATGCGTTCAAAGCCATCAAGACACCCCAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 72 bp ATGACATACAGTTTATTGTTCACTGTTACCACAGCATaGCAAGCCAGCTGCAGTGGAAGGGGAGATACTCGT +
Preference number: 6 (lower is better)
Translates to: MTYSLLFTVTTA*QASCSGRGDTR
Trigger: ACGAGTATCTCCCCTTCCACTGCAGCTGGCTTGTCATGCTGTGGTAACAGTGAACAATAAACTGTATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS GCA 72 bp AGTTCCAGTCTGACTTGCTTCAAAAGCTCAACGAGATaGTCTGTGCGCAAAGCTTGGTTATGGTTTACCCAT +
Preference number: 6 (lower is better)
Translates to: SSSLTCFKSSTR*SVRKAWLWFTH
Trigger: ATGGGTAAACCATAACCAAGCTTTGCGCACAGAGCATCTCGTTGAGCTTTTGAAGCAAGTCAGACTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS GCA 72 bp ATTGATCTTGGCTGGGGTCATACTGCAACAGTTTGTTaGTTAATCGATCAGGCTCTTCGTCAGGAAGATCCA +
Preference number: 6 (lower is better)
Translates to: IDLGWGHTATVC*LIDQALRQEDP
Trigger: TGGATCTTCCTGACGAAGAGCCTGATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120933.5
ENSMUST00000184878.7
CDS TCA 72 bp AAAAACTGGCATCCCCATAGCTCCTGTGCCTTGATCTaGTTCCAGAAGAATTGTTCCCAATGCAAAGCAGAA +
Preference number: 6 (lower is better)
Translates to: KNWHPHSSCALI*FQKNCSQCKAE
Trigger: TTCTGCTTTGCATTGGGAACAATTCTTCTGGAATCAGATCAAGGCACAGGAGCTATGGGGATGCCAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 72 bp ACCTCGGCGAAGTGCTGGTATAAATACTTCTTCGACTaGTCCGATAAATCTTCTGCTCCGATTTGTTTTGCA +
Preference number: 6 (lower is better)
Translates to: TSAKCWYKYFFD*SDKSSAPICFA
Trigger: TGCAAAACAAATCGGAGCAGAAGATTTATCGGATCAGTCGAAGAAGTATTTATACCAGCACTTCGCCGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 72 bp ATAACAAAAACTGGCATCCCCATAGCTCCTGTGCCTTaGTCTGATTCCAGAAGAATTGTTCCCAATGCAAAG +
Preference number: 6 (lower is better)
Translates to: ITKTGIPIAPVP*SDSRRIVPNAK
Trigger: CTTTGCATTGGGAACAATTCTTCTGGAATCAGATCAAGGCACAGGAGCTATGGGGATGCCAGTTTTTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS CAA 72 bp GCAGTTGGAGGCATCCATGTGGTCCATCATATAGTTTaGGCACACACTAAAGACTTCTTCCATCTGCATAAA +
Preference number: 6 (lower is better)
Translates to: AVGGIHVVHHIV*AHTKDFFHLHK
Trigger: TTTATGCAGATGGAAGAAGTCTTTAGTGTGTGCCAAAACTATATGATGGACCACATGGATGCCTCCAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 72 bp TGCAGTGGAAGGGGAGATACTCGTTTCCAGTTGTCTTaGTCTACTGAGTACTTATCAACACAGTTTGTTATG +
Preference number: 6 (lower is better)
Translates to: CSGRGDTRFQLS*STEYLSTQFVM
Trigger: CATAACAAACTGTGTTGATAAGTACTCAGTAGATCAAGACAACTGGAAACGAGTATCTCCCCTTCCACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS TCA 72 bp AAGGGGAGATACTCGTTTCCAGTTGTCTTGATCTACTaGGTACTTATCAACACAGTTTGTTATGAGGTACTG +
Preference number: 6 (lower is better)
Translates to: KGRYSFPVVLIY*VLINTVCYEVL
Trigger: CAGTACCTCATAACAAACTGTGTTGATAAGTACTCAGTAGATCAAGACAACTGGAAACGAGTATCTCCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5
CDS GCA 72 bp TTCTCTGGATATATTCAGATCATCAGACTTAATAAGTaGCAGAAGCTGGTGAGCTTCGATGTCAAGTATTTC +
Preference number: 6 (lower is better)
Translates to: FSGYIQIIRLNK*QKLVSFDVKYF
Trigger: GAAATACTTGACATCGAAGCTCACCAGCTTCTGGCACTTATTAAGTCTGATGATCTGAATATATCCAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120933.5