RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KATNIP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032743

Ensembl transcript IDs: ENSMUST00000069660.13, ENSMUST00000124223.8, ENSMUST00000132204.3, ENSMUST00000148701.4

Found 519 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGTGGCCTCTCTaGAGCTCCGTTGCCCTTAGTGAGGAGGGCTGTGTAGTGGAGGAC +
Preference number: 1 (lower is better)
Translates to: HWIEEEQLAPQQWPL*SSVALSEEGCVVED
Trigger: GTCCTCCACTACACAGCCCTCCTCACTAAGGGCAACGGAGCTGCAGAGAGGCCACTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CCA 90 bp GACAGAGGCTACCTAGGACTCACCCCATCAGGCCTCCAAAGGCACTaGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGTGGCCTCTCTGC +
Preference number: 1 (lower is better)
Translates to: DRGYLGLTPSGLQRH*IEEEQLAPQQWPLC
Trigger: GCAGAGAGGCCACTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAGGTAGCCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR TCA 90 bp TGTGTAGTGGAGGACCATGGGCTCCATGGTCATGGTACTGAGATCTaGGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCC +
Preference number: 1 (lower is better)
Translates to: CVVEDHGLHGHGTEI*AWVRGCLGLGCQRP
Trigger: GGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAGATCTCAGTACCATGACCATGGAGCCCATGGTCCTCCACTACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CCA 90 bp CTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGTaGCCTCTCTGCAGCTCCGTTGCCCTTAGTGAGGAGGGCTGTGTA +
Preference number: 1 (lower is better)
Translates to: LQRHWIEEEQLAPQQ*PLCSSVALSEEGCV
Trigger: TACACAGCCCTCCTCACTAAGGGCAACGGAGCTGCAGAGAGGCCACTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CCA 90 bp CTTATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTaGCTCCCAGCAGCTAGCCCCATGTGGCAGGAGACAGCTATCCTG +
Preference number: 1 (lower is better)
Translates to: LIDLTGEAQRGIRYP*LPAASPMWQETAIL
Trigger: CAGGATAGCTGTCTCCTGCCACATGGGGCTAGCTGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CCA 90 bp ACAGCTATCCTGTTCTTGACCCTTTCATCTGACCCCTATAGCTCCTaGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCC +
Preference number: 1 (lower is better)
Translates to: TAILFLTLSSDPYSS*GCDSSPLSLHALPA
Trigger: GGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGGAGCTATAGGGGTCAGATGAAAGGGTCAAGAACAGGATAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR GCA 90 bp GAGGCTACAGAGATGATGGATTCTCATCAGAGAAGCAATCCTATCTaGATGTCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: EATEMMDSHQRSNPI*MSAGSELKHLYSCW
Trigger: CCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGACATGCAGATAGGATTGCTTCTCTGATGAGAATCCATCATCTCTGTAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR CCA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTGGAATCAGGTATCCCTaGCTCCCAGCAGCTAGCCCC +
Preference number: 2 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPGIRYP*LPAASP
Trigger: GGGGCTAGCTGCTGGGAGCCAGGGATACCTGATTCC...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
3UTR-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGGAATCAGGTATCCCTaGCTCCCAGCAGCTAGCCCC +
Preference number: 2 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLGIRYP*LPAASP
Trigger: GGGGCTAGCTGCTGGGAGCCAGGGATACCTGATTCC...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR CCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGCTGGCTCCTCAGCAGTaGCCTCTCTGCAGCTCCGTT +
Preference number: 2 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAELAPQQ*PLCSSV
Trigger: AACGGAGCTGCAGAGAGGCCACTGCTGAGGAGCCAG...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR TCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTAGCCAACCCTGAAGTGTaGAGGACATGGGTACTGTTC +
Preference number: 2 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLANPEV*RTWVLF
Trigger: GAACAGTACCCATGTCCTTCACACTTCAGGGTTGGC...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR TCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACAGCTATCCTGTTCTTaGCCCTTTCATCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLQLSCS*PFHLTP
Trigger: AGGGGTCAGATGAAAGGGTCAAGAACAGGATAGCTG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR TCA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGGCCAACCCTGAAGTGTaGAGGACATGGGTACTGTTC +
Preference number: 2 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERANPEV*RTWVLF
Trigger: GAACAGTACCCATGTCCTTCACACTTCAGGGTTGGC...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGTGTAGTGGAGGACCATaGGCTCCATGGTCATGGTAC +
Preference number: 2 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLCSGGP*APWSWY
Trigger: GTACCATGACCATGGAGCCCATGGTCCTCCACTACA...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CAA 90 bp CTCTCCTCAGCAGGACACATGCCCTTGACCCATCCTGAATCAGGTTaGAACAGAGGACAGAGGCTACCTAGGACTCACCCCATCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LSSAGHMPLTHPESG*NRGQRLPRTHPIRP
Trigger: AGGCCTGATGGGGTGAGTCCTAGGTAGCCTCTGTCCTCTGTTCAAACCTGATTCAGGATGGGTCAAGGGCATGTGTCCTGCTGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR TCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACCAGCTATCCTGTTCTTaGCCCTTTCATCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDQLSCS*PFHLTP
Trigger: AGGGGTCAGATGAAAGGGTCAAGAACAGGATAGCTG...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR CCA 90 bp GTTAATGCTTCTGCCAGTGCCTTCCCTCTGAGAGTGCATGGAGCATATGCTTATACAGGTATGGGGCTCTaGACTGCAGGGCGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: VNASASAFPLRVHGAYAYTGMGL*TAGRRG
Trigger: ACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGT...ATAAGCATATGCTCCATGCACTCTCAGAGGGAAGGCACTGGCAGAAGCATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
3UTR-3UTR CCA 90 bp TATAAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTATGTACACACAGGTATaGGGCTCTGGACTGCAGGGC +
Preference number: 2 (lower is better)
Translates to: YKHRPSIWRSTSRSVLGAMYTQV*GSGLQG
Trigger: GCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACAT...AGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
3UTR TCA 72 bp GCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTaGAGTGTGAAGGACATGGGTACTGTTCAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: ALPALGVPAGQP*SVKDMGTVQGW
Trigger: CCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR GCA 72 bp GTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTaGTCTTATAGACCTCACAGGGGAGGCACAGAGAGG +
Preference number: 3 (lower is better)
Translates to: VRGCLGLGCQRP*SYRPHRGGTER
Trigger: CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CCA 72 bp CTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTaGCTCCCAGCAGCTAGCCCCATGTGGCAGGAGACA +
Preference number: 3 (lower is better)
Translates to: LTGEAQRGIRYP*LPAASPMWQET
Trigger: TGTCTCCTGCCACATGGGGCTAGCTGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CCA 72 bp GTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTaGCCAACCCTGAAGTGTGAAGGACATGGGTACTGT +
Preference number: 3 (lower is better)
Translates to: VPPCSSSPWGPS*PTLKCEGHGYC
Trigger: ACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR TCA 72 bp CAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTaGAGGACATGGGTACTGTTCAGGGCTGGTGATAGA +
Preference number: 3 (lower is better)
Translates to: QPLGSQLANPEV*RTWVLFRAGDR
Trigger: TCTATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR TCA 72 bp TGTAGTGGAGGACCATGGGCTCCATGGTCATGGTACTaGGATCTGAGCCTGGGTCAGGGGCTGCCTAGGACT +
Preference number: 3 (lower is better)
Translates to: CSGGPWAPWSWY*DLSLGQGLPRT
Trigger: AGTCCTAGGCAGCCCCTGACCCAGGCTCAGATCTCAGTACCATGACCATGGAGCCCATGGTCCTCCACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CCA 72 bp TTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTaGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: FKSLVPPCSSSP*GPSWPTLKCEG
Trigger: TCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CCA 72 bp CCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTaGCTTCCTCCGCAGAGTTGGTTTGATGGCTCTCCT +
Preference number: 3 (lower is better)
Translates to: PGEAGLLLEQRP*LPPQSWFDGSP
Trigger: AGGAGAGCCATCAAACCAACTCTGCGGAGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
3UTR-3UTR CAA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAAATGCTCTTCCAGCCCTaGGGGTCCCAGCTGGCCAAC +
Preference number: 3 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPEMLFQP*GSQLAN
Trigger: GTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCAT...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
3UTR CCA 72 bp GCTTGTTCCATAGATGTACACACAGGTATGGGGCTCTaGACTGCAGGGCGAAGAGGTAGGGCTGAGCCTAGG +
Preference number: 3 (lower is better)
Translates to: ACSIDVHTGMGL*TAGRRGRAEPR
Trigger: CCTAGGCTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATCTATGGAACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR CAA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGCATCCTGAATCAGGTTaGAACAGAGGACAGAGGCTA +
Preference number: 3 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAEHPESG*NRGQRL
Trigger: TAGCCTCTGTCCTCTGTTCAAACCTGATTCAGGATG...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR CAA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAACAGCTATCCTGTTCTaGACCCTTTCATCTGACCCC +
Preference number: 3 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTTAILF*TLSSDP
Trigger: GGGGTCAGATGAAAGGGTCAAGAACAGGATAGCTGT...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR-3UTR CAA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAACAGCTATCCTGTTCTaGACCCTTTCATCTGACCCC +
Preference number: 3 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPTAILF*TLSSDP
Trigger: GGGGTCAGATGAAAGGGTCAAGAACAGGATAGCTGT...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACCAGGCCAGGCAGGATaGGGGCCAACCACATGTGCC +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLPGQAG*GPTTCA
Trigger: GGCACATGTGGTTGGCCCCCATCCTGCCTGGCCTGG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTGGGGCCAGCCAGACATaGATGTCATCCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPGASQT*MSSWVL
Trigger: CAGGACCCAGGATGACATGCATGTCTGGCTGGCCCC...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTTCTGGAGGCTTGTGCTaGGCCCCAGGCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPSGGLC*APGLFS
Trigger: TGAGAAAAGGCCTGGGGCTCAGCACAAGCCTCCAGA...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACGTCCATGGCTTGGCTaGCAGCTTTGGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLRPWLG*QLWLLL
Trigger: CAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGGGGCCTCGTAGTCCATaGTGGCTCGCTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQGPRSP*WLAPGS
Trigger: AGAGCCTGGAGCGAGCCAGCATGGACTACGAGGCCC...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCACACGTGGGCAGGATaGCCCCAACCAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGHTWAG*PQPGGS
Trigger: TGAGCCACCTGGTTGGGGGCATCCTGCCCACGTGTG...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCAGGCTGGGTCAGCAGTaGCTGGCTTCCTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGRLGQQ*LASSSR
Trigger: CCTCGAGGAGGAAGCCAGGCACTGCTGACCCAGCCT...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGAGGGTGTCTGTGGCCTaGGGATGCCGGCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGRVSVA*GCRPSS
Trigger: ACTGGAAGGCCGGCATCCCCAGGCCACAGACACCCT...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCCACAAGGGTGTCTGTaGCCTGGGGATGCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGPQGCL*PGDAGL
Trigger: AAGGCCGGCATCCCCAGGCCACAGACACCCTTGTGG...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGGGCTCTCTCCTGCTCTaGGAACACAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQGSLLL*EHSWGL
Trigger: CAGCCCCCAGCTGTGTTCCCAGAGCAGGAGAGAGCC...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACTCTGTGGAGGGCTCTaGCTCCTCCTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLLCGGL*LLLSAR
Trigger: CCTTGCAGAGAGGAGGAGCCAGAGCCCTCCACAGAG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTATCTAGCCCTGGTACCTaGTCCTGGGCACCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLSSPGT*SWAPKP
Trigger: TGGCTTGGGTGCCCAGGACCAGGTACCAGGGCTAGA...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGCCCTCCTTTCTCTCCTaGGAGCAGGACCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGPSFLS*EQDRLL
Trigger: GAGAAGCCGGTCCTGCTCTCAGGAGAGAAAGGAGGG...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTCTGGACTTTTCCTGGTaGTGTCCTGGAGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPLDFSW*CPGAAS
Trigger: AGACGCAGCTCCAGGACAGCACCAGGAAAAGTCCAG...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACGGCCTTCCAGTTCCTaGTCCTTGGGGACATCCTTC +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLRPSSS*SLGTSF
Trigger: GAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGGCTCTCTCCTGCTCTaGGAACACAGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLGSLLL*EHSWGL
Trigger: CAGCCCCCAGCTGTGTTCCCAGAGCAGGAGAGAGCC...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGGTGTGGGTCATGCCTaGTGTGAAGGGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLGVGHA*CEGGQP
Trigger: TGGCTGGCCCCCTTCACACCAGGCATGACCCACACC...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATCCTGGTACCTGGTCCTaGGCACCCAAGCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHPGTWS*APKPAC
Trigger: ACAGGCTGGCTTGGGTGCCCAGGACCAGGTACCAGG...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATCGTCCATGGCTTGGCTaGCAGCTTTGGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHRPWLG*QLWLLL
Trigger: CAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACG...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCGGATTCCGCTGGCTGTaGGCAGCTGAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALGFRWL*AAEPKL
Trigger: GAGCTTGGGCTCAGCTGCTCACAGCCAGCGGAATCC...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGTTTCCCAGGAGAGGATaGAGAAGGGACACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQFPRRG*RRDTGP
Trigger: GGGCCCAGTGTCCCTTCTTCATCCTCTCCTGGGAAA...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGCTCAGCTCCTGTGTGTaGTCCCCAGTGGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGLSSCV*SPVASS
Trigger: TGAGGATGCCACTGGGGAGCACACACAGGAGCTGAG...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGGAACAGGCTCTCTCCTaGTCTGGGAACACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGEQALS*SGNTAG
Trigger: CCCAGCTGTGTTCCCAGAGCAGGAGAGAGCCTGTTC...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGCTCCTGCTGCTGCTCTaGACAGCTCAGGATCGGTGG +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAELLLLL*TAQDRW
Trigger: CCACCGATCCTGAGCTGTGCAGAGCAGCAGCAGGAG...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGCCTGGGTGTCTTCTTTaGTGGCTGGCCGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQPGCLL*WLAGHH
Trigger: GTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGG...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAGGGCCTCGTAGTCCATaGTGGCTCGCTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAGPRSP*WLAPGS
Trigger: AGAGCCTGGAGCGAGCCAGCATGGACTACGAGGCCC...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCGGGGCCAACCACATGTaGCTGCCATCGCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALGANHM*LPSLVS
Trigger: CGACACCAGCGATGGCAGGCACATGTGGTTGGCCCC...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCACCACAAGGGTGTCTGTaGCCTGGGGATGCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAPQGCL*PGDAGL
Trigger: AAGGCCGGCATCCCCAGGCCACAGACACCCTTGTGG...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCACAGCTGGGGGCTGTaGATTCAGGACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGHSWGL*IQDRVW
Trigger: CCAGACTCTGTCCTGAATCCACAGCCCCCAGCTGTG...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTAAGGATCGGTGGTCACTaGAGTAGCAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLRIGGH*SSRKQL
Trigger: GAGCTGCTTCCTGCTACTCCAGTGACCACCGATCCT...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCGAGGGCCTTTTTCCCTaGTCTCCACCTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGEGLFP*SPPLQE
Trigger: CTCCTGGAGAGGTGGAGACCAGGGAAAAAGGCCCTC...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGCTCTCTGCAAGGGGCTaGGAATTCCTCATGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGLSARG*EFLMPA
Trigger: AGCCGGCATGAGGAATTCCCAGCCCCTTGCAGAGAG...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATTCTAGCCCTGGTACCTaGTCCTGGGCACCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHSSPGT*SWAPKP
Trigger: TGGCTTGGGTGCCCAGGACCAGGTACCAGGGCTAGA...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGCATCTAGTCTCCTGGTaGGTGCTGGTGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERHLVSW*VLVVAG
Trigger: CCCGGCTACCACCAGCACCCACCAGGAGACTAGATG...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGCCTCGTAGTCCATGCTaGCTCGCTCCAGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGPRSPC*LAPGSL
Trigger: CAAAGAGCCTGGAGCGAGCCAGCATGGACTACGAGG...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGAGGGATCGCCCCAGCTaGACAGCAGCTGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLRDRPS*TAAGTG
Trigger: TCCAGTTCCAGCTGCTGTCCAGCTGGGGCGATCCCT...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGATGCCCCCAACCAGGTaGCTCACCATGGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQMPPTR*LTMARM
Trigger: CATCCTTGCCATGGTGAGCCACCTGGTTGGGGGCAT...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACACAGCTTTCCGTGGTaGTGTCTTCAGCTCCGAGTT +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLHSFPW*CLQLRV
Trigger: AACTCGGAGCTGAAGACATCACCACGGAAAGCTGTG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGTCTGGAGGCTTGTGCTaGGCCCCAGGCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERSGGLC*APGLFS
Trigger: TGAGAAAAGGCCTGGGGCTCAGCACAAGCCTCCAGA...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGGGTCATGCCTGGTGTaGAGGGGGCCAGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTGSCLV*RGPARH
Trigger: ATGTCTGGCTGGCCCCCTTCACACCAGGCATGACCC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGACAGCTCCAGCCCTGTaGGGCCGATGTAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLTAPAL*GRCSRD
Trigger: ATCCCTACTACATCGGCCTCACAGGGCTGGAGCTGT...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGTGCACAGATTTCTGGTaGCATCCTCGGCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQCTDFW*HPRRWT
Trigger: AGTCCAGCGCCGAGGATGGCACCAGAAATCTGTGCA...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGCTCAGCTCCTGTGTGTaGTCCCCAGTGGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERLSSCV*SPVASS
Trigger: TGAGGATGCCACTGGGGAGCACACACAGGAGCTGAG...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGGAACAGGCTCTCTCCTaGTCTGGGAACACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGCQRPCSYRPHRGGTEREQALS*SGNTAG
Trigger: CCCAGCTGTGTTCCCAGAGCAGGAGAGAGCCTGTTC...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTTTTCTTTCCAGCCAGTaGTCAAGGCCTTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPFLSSQ*SRPCLS
Trigger: GCTCAGACAAGGCCTTGAGCACTGGCTGGAAAGAAA...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGCTGGCTCCTCCTCTCTaGAAGGGGCTGGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAELAPPL*KGLGIP
Trigger: AGGAATTCCCAGCCCCTTGCAGAGAGGAGGAGCCAG...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGGATGAGAAAGCCTTCTaGAGGAGACACGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQDEKAF*RRHAQA
Trigger: GGCCTGTGCGTGTCTCCTGCAGAAGGCTTTCTCATC...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACGGGGCCAACCACATGTaGCTGCCATCGCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDGANHM*LPSLVS
Trigger: CGACACCAGCGATGGCAGGCACATGTGGTTGGCCCC...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACACACACGTGGGCAGGATaGCCCCAACCAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTHTWAG*PQPGGS
Trigger: TGAGCCACCTGGTTGGGGGCATCCTGCCCACGTGTG...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCATCTGCACAGATTTCTaGTGCCATCCTCGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGICTDF*CHPRRW
Trigger: CCAGCGCCGAGGATGGCACCAGAAATCTGTGCAGAT...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTATGGCCTTCAGCAGACTaGACCAGGATTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLWPSAD*TRILLV
Trigger: CACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCA...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCATAGAGCTGAAGTGGTaGGTGGAAGGGGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGIELKW*VEGAGP
Trigger: TGGACCTGCCCCTTCCACCCACCACTTCAGCTCTAT...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCAACCAAGGCAGTGTCTaGGAGGCCTGGGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGNQGSV*EAWVSS
Trigger: AGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTT...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCCTCTGTGGAGGGCTCTaGCTCCTCCTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALLCGGL*LLLSAR
Trigger: CCTTGCAGAGAGGAGGAGCCAGAGCCCTCCACAGAG...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTGTTGGAGACTACACGTaGGTCTTTCCCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPVGDYT*VFPISW
Trigger: CCAGCTTATGGGAAAGACCCACGTGTAGTCTCCAAC...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGGTGTGGGTCATGCCTaGTGTGAAGGGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTGVGHA*CEGGQP
Trigger: TGGCTGGCCCCCTTCACACCAGGCATGACCCACACC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCACATCTAGTCTCCTGGTaGGTGCTGGTGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAHLVSW*VLVVAG
Trigger: CCCGGCTACCACCAGCACCCACCAGGAGACTAGATG...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGCCTCGTAGTCCATGCTaGCTCGCTCCAGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLPRSPC*LAPGSL
Trigger: CAAAGAGCCTGGAGCGAGCCAGCATGGACTACGAGG...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATATGCCCCCAACCAGGTaGCTCACCATGGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHMPPTR*LTMARM
Trigger: CATCCTTGCCATGGTGAGCCACCTGGTTGGGGGCAT...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATTGGGTCAGCAGTGCCTaGCTTCCTCCTCGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHWVSSA*LPPRGS
Trigger: ACTACCTCGAGGAGGAAGCCAGGCACTGCTGACCCA...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACCGAGTTGGCCCCATTaGCATAGACAGAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLPSWPH*HRQRNL
Trigger: AAGGTTTCTCTGTCTATGTCAATGGGGCCAACTCGG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGCACAGCTTTCCGTGGTaGTGTCTTCAGCTCCGAGTT +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGHSFPW*CLQLRV
Trigger: AACTCGGAGCTGAAGACATCACCACGGAAAGCTGTG...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCGCTCAAGGCCTTGTCTaGGCTCTCATTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGAQGLV*ALIPLS
Trigger: AGAGAGAGGAATGAGAGCTCAGACAAGGCCTTGAGC...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATAGGGTCATGCCTGGTGTaGAGGGGGCCAGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIGSCLV*RGPARH
Trigger: ATGTCTGGCTGGCCCCCTTCACACCAGGCATGACCC...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAAGCGCTTCTTCAGGCTaGAGGCCACACAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPASASSG*RPHRLS
Trigger: TGAGAGCCTGTGTGGCCTTCAGCCTGAAGAAGCGCT...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATCTGGACTTTTCCTGGTaGTGTCCTGGAGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHLDFSW*CPGAAS
Trigger: AGACGCAGCTCCAGGACAGCACCAGGAAAAGTCCAG...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAGCTGCATATGCTTTaGGGGTTGCTGACAAGGGTC +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGQLHML*GLLTRV
Trigger: GACCCTTGTCAGCAACCCGCAAAGCATATGCAGCTG...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACCTCCTGCTGCTGCTCTaGACAGCTCAGGATCGGTGG +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDLLLLL*TAQDRW
Trigger: CCACCGATCCTGAGCTGTGCAGAGCAGCAGCAGGAG...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCCCTGGGTGTCTTCTTTaGTGGCTGGCCGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALPGCLL*WLAGHH
Trigger: GTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGG...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCTGCCGGCTGCTCCTTTaGTGCTTCAGGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGCRLLL*CFRNSS
Trigger: AGATGAGTTCCTGAAGCAGCAAAGGAGCAGCCGGCA...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACGGGGCCAGCCAGACATaGATGTCATCCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDGASQT*MSSWVL
Trigger: CAGGACCCAGGATGACATGCATGTCTGGCTGGCCCC...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACCTGTGAGGCACTTCTaGAGAAGTCTGTATGCACAG +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLPVRHF*RSLYAQ
Trigger: CTGTGCATACAGACTTCTCCAGAAGTGCCTCACAGG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCATGCCATCCTCGGCGCTaGACTTTTCCTGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPACHPRR*TFPGAV
Trigger: GACAGCACCAGGAAAAGTCCAGCGCCGAGGATGGCA...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGGTGTGTGCTCCCCAGTaGCATCCTCATGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAEVCAPQ*HPHACQ
Trigger: TTGGCAAGCATGAGGATGCCACTGGGGAGCACACAC...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGTCCGGCTTCCAGATCTaGAACAGGCTCTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLSGFQI*NRLSPA
Trigger: AGCAGGAGAGAGCCTGTTCCAGATCTGGAAGCCGGA...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCCGTTCTCCACCTGGATaGCTTTCAGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALRSPPG*LSAQPR
Trigger: CCTCGGCTGTGCTGAAAGCCATCCAGGTGGAGAACG...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGTGTAGCTCAGGATCGTaGCTGAGGAAGACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQCSSGS*LRKTCC
Trigger: GCAACAGGTCTTCCTCAGCCACGATCCTGAGCTACA...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTTGCTGGTGGTTCCTTaGTATCCTGCTGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGLLVVP*YPAVDW
Trigger: CCAGTCCACAGCAGGATACCAAGGAACCACCAGCAA...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTATACTGGCTTCTCTGTTaGTATAGCCACCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLYWLLC*YSHLAE
Trigger: CTCAGCCAGGTGGCTATACCAACAGAGAAGCCAGTA...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGATAGAGCTGAAGTGGTaGGTGGAAGGGGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLIELKW*VEGAGP
Trigger: TGGACCTGCCCCTTCCACCCACCACTTCAGCTCTAT...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGAACCAAGGCAGTGTCTaGGAGGCCTGGGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAENQGSV*EAWVSS
Trigger: AGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTT...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGGGTCATTTAAGTCCCTaGGAGAGGCAGAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQGHLSP*ERQRAG
Trigger: ACCAGCTCTCTGCCTCTCCCAGGGACTTAAATGACC...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGCCACAGGGCATGAGTaGGGCCTCGTAGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTATGHE*GLVVHA
Trigger: AGCATGGACTACGAGGCCCCACTCATGCCCTGTGGC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAACCAGGCCAGGCAGGATaGGGGCCAACCACATGTGCC +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPEPGQAG*GPTTCA
Trigger: GGCACATGTGGTTGGCCCCCATCCTGCCTGGCCTGG...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGTCATTCCTCTCTCTCTaGAGGTCCACGGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAESFLSL*RSTGMV
Trigger: TACCATCCCCGTGGACCTTCAGAGAGAGAGGAATGA...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCAAGGCAGCCATCTTaGGGGCACCTTTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGSRQPS*GHLCFL
Trigger: AAGAAAGCAAAGGTGCCCTCAAGATGGCTGCCTTGA...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACTTTCCCAGGAGAGGATaGAGAAGGGACACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDFPRRG*RRDTGP
Trigger: GGGCCCAGTGTCCCTTCTTCATCCTCTCCTGGGAAA...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAGGAGTATCACCCATaGCATCCTCAGATGGAAACC +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGQEYHP*HPQMET
Trigger: GGTTTCCATCTGAGGATGTCATGGGTGATACTCCTG...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCATCAGAGTTCCTaGGGCTTTGGCAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGSHQSS*GFGNFS
Trigger: GGAGAAATTGCCAAAGCCTCAGGAACTCTGATGGGA...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCACCAAGCCAGCCTGTGTaGAAGGCCTTTCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAPSQPV*KAFHPD
Trigger: GTCAGGATGAAAGGCCTTTCACACAGGCTGGCTTGG...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCTGCACAGATTTCTGGTaGCATCCTCGGCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALCTDFW*HPRRWT
Trigger: AGTCCAGCGCCGAGGATGGCACCAGAAATCTGTGCA...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTTGGCATCCTCATGCTTaGCAATCACATCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPWHPHA*QSHLLV
Trigger: CACAAGAAGATGTGATTGGCAAGCATGAGGATGCCA...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACAGCTTTGGCTCCTGCTaGTGCTCTGCACAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDSFGSC*CSAQLR
Trigger: CCTGAGCTGTGCAGAGCAGCAGCAGGAGCCAAAGCT...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATCATCACCATGGCTACTaGTGGCTTCCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHHHHGY*WLPSSG
Trigger: CCCTGAAGAAGGAAGCCAGCAGTAGCCATGGTGATG...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGTGCTCACCATACCACTaGAACCAAGGCAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERCSPYH*NQGSVW
Trigger: CCAGACACTGCCTTGGTTGCAGTGGTATGGTGAGCA...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGTGCAGTGCGTGTTCCTaGTCACCATACCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAECSACS*SPYHCN
Trigger: GTTGCAGTGGTATGGTGAGCAGGAACACGCACTGCA...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGCGGCTGCTCCTTTGCTaGTTCAGGAACTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLRLLLC*FRNSSR
Trigger: CCTAGATGAGTTCCTGAAGCAGCAAAGGAGCAGCCG...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACCTGGCTCCTCCTCTCTaGAAGGGGCTGGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDLAPPL*KGLGIP
Trigger: AGGAATTCCCAGCCCCTTGCAGAGAGGAGGAGCCAG...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAAAGGCTGGGTCAGCAGTaGCTGGCTTCCTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPERLGQQ*LASSSR
Trigger: CCTCGAGGAGGAAGCCAGGCACTGCTGACCCAGCCT...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGCCTGTGAGGCACTTCTaGAGAAGTCTGTATGCACAG +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQPVRHF*RSLYAQ
Trigger: CTGTGCATACAGACTTCTCCAGAAGTGCCTCACAGG...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCATCTGCACAGATTTCTaGTGCCATCCTCGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALICTDF*CHPRRW
Trigger: CCAGCGCCGAGGATGGCACCAGAAATCTGTGCAGAT...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACACGTTCTCCACCTGGATaGCTTTCAGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTRSPPG*LSAQPR
Trigger: CCTCGGCTGTGCTGAAAGCCATCCAGGTGGAGAACG...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCGCTTCGTTCTCCACCTaGATGGCTTTCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALASFST*MAFSTA
Trigger: GGCTGTGCTGAAAGCCATCCAGGTGGAGAACGAAGC...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATTTGCTGGTGGTTCCTTaGTATCCTGCTGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHLLVVP*YPAVDW
Trigger: CCAGTCCACAGCAGGATACCAAGGAACCACCAGCAA...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATATTCCGTCCATGGCTTaGCTGACAGCTTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHIPSMA*LTALAP
Trigger: AGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGAAT...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCACATGCATGTCATCCTaGGTCCTGTTCACCCCATCA +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGTCMSS*VLFTPS
Trigger: TGATGGGGTGAACAGGACCCAGGATGACATGCATGT...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAACCTGGTACCTGGTCCTaGGCACCCAAGCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPEPGTWS*APKPAC
Trigger: ACAGGCTGGCTTGGGTGCCCAGGACCAGGTACCAGG...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGCCCATAGAAGATGCCTaGCTCAGGTGTGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLPIEDA*LRCGDF
Trigger: GAAGTCACCACACCTGAGCCAGGCATCTTCTATGGG...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGGGTCATTTAAGTCCCTaGGAGAGGCAGAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERGHLSP*ERQRAG
Trigger: ACCAGCTCTCTGCCTCTCCCAGGGACTTAAATGACC...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATAAGGGATCGCCCCAGCTaGACAGCAGCTGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIRDRPS*TAAGTG
Trigger: TCCAGTTCCAGCTGCTGTCCAGCTGGGGCGATCCCT...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGCCTTCAAAGATGCACTaGGTATCCAACAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQPSKMH*VSNSIV
Trigger: CACGATGCTGTTGGATACTCAGTGCATCTTTGAAGG...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCCAGTGGCATCCTCATaGTTGCCAATCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGPVASS*LPITSS
Trigger: AGAAGATGTGATTGGCAAGCATGAGGATGCCACTGG...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGACTGGACCAGGATTTTaGTGGTGGTTCCTTGGTATC +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQTGPGF*WWFLGI
Trigger: GATACCAAGGAACCACCAGCAAAATCCTGGTCCAGT...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCTGCAGTGCGTGTTCCTaGTCACCATACCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALCSACS*SPYHCN
Trigger: GTTGCAGTGGTATGGTGAGCAGGAACACGCACTGCA...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCATGCCGGCTGCTCCTTTaGTGCTTCAGGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPACRLLL*CFRNSS
Trigger: AGATGAGTTCCTGAAGCAGCAAAGGAGCAGCCGGCA...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGATAGTGTCTCCAAAGTaGTCAGGGGCTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAEIVSPK*SGAPIR
Trigger: TCTGATGGGAGCCCCTGAGCACTTTGGAGACACTAT...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTAGCTGCACAGGGTCCTTaGCTTTCAAATGCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLAAQGP*LSNALV
Trigger: TACTAAAGCATTTGAAAGCCAAGGACCCTGTGCAGC...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGTGTGTGCTCCCCAGTaGCATCCTCATGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTVCAPQ*HPHACQ
Trigger: TTGGCAAGCATGAGGATGCCACTGGGGAGCACACAC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCATCTCTGTTGTGGACTaGCAGGACAGGGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALISVVD*QDRVLS
Trigger: ACTGAGGACCCTGTCCTGCCAGTCCACAACAGAGAT...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAATCTCTGTTGTGGACTaGCAGGACAGGGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAISVVD*QDRVLS
Trigger: ACTGAGGACCCTGTCCTGCCAGTCCACAACAGAGAT...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCACCAGTTCCTGGTCCTTaGGGACATCCTTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAPVPGP*GHPSVL
Trigger: CAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGG...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACGCTTCGTTCTCCACCTaGATGGCTTTCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDASFST*MAFSTA
Trigger: GGCTGTGCTGAAAGCCATCCAGGTGGAGAACGAAGC...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATGCCACCTGGCTGAGATaGGTAGTGTCACTTTCCATA +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHATWLR*VVSLSI
Trigger: TATGGAAAGTGACACTACCCATCTCAGCCAGGTGGC...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGACATGCATGTCATCCTaGGTCCTGTTCACCCCATCA +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAETCMSS*VLFTPS
Trigger: TGATGGGGTGAACAGGACCCAGGATGACATGCATGT...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGTCAATGGAGATGGTGTaGGTCATGCCTGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLSMEMV*VMPGVK
Trigger: CTTCACACCAGGCATGACCCACACCATCTCCATTGA...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGCTAATCAGGGCAACTTaGCAAGGGTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGLIRAT*QGCVNS
Trigger: TGAGTTCACACACCCTTGCCAAGTTGCCCTGATTAG...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGCTAATCAGGGCAACTTaGCAAGGGTGTGTGAACTCA +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQLIRAT*QGCVNS
Trigger: TGAGTTCACACACCCTTGCCAAGTTGCCCTGATTAG...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGGCAGCAATATTGTTCTaGGACAATGGGATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQAAILF*DNGILS
Trigger: GGAGAGGATCCCATTGTCCCAGAACAATATTGCTGC...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATCTGGTGTCGTTGACTTaGTCGATAAGCTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHLVSLT*SISLSG
Trigger: CCCTGACAAGCTTATCGACCAAGTCAACGACACCAG...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAAAAAGGATGGTGTGGTaGGGCACGGTAGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTKRMVW*GTVGSH
Trigger: GTGTGAGCCTACCGTGCCCCACCACACCATCCTTTT...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
3UTR CAA 72 bp GCAGGACACATGCCCTTGACCCATCCTGAATCAGGTTaGAACAGAGGACAGAGGCTACCTAGGACTCACCCC +
Preference number: 4 (lower is better)
Translates to: AGHMPLTHPESG*NRGQRLPRTHP
Trigger: GGGGTGAGTCCTAGGTAGCCTCTGTCCTCTGTTCAAACCTGATTCAGGATGGGTCAAGGGCATGTGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGAGCCAGCTTCAGTTCTaGTCTGCACAGATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLSQLQF*SAQISG
Trigger: ACCAGAAATCTGTGCAGATCAGAACTGAAGCTGGCT...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCAGAACTGGACTTCTGTaGGACCCACCCATGATGCAT +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALRTGLL*DPPMMH
Trigger: ATGCATCATGGGTGGGTCTCACAGAAGTCCAGTTCT...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGCTCAAGGCCTTGTCTaGGCTCTCATTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTAQGLV*ALIPLS
Trigger: AGAGAGAGGAATGAGAGCTCAGACAAGGCCTTGAGC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATAGGGGTTTGGGCTTCCTaGCTGTCTGTTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIGVWAS*LSVSCP
Trigger: TGGGCAAGAAACAGACAGTCAGGAAGCCCAAACCCC...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCACTTGGCAAGGGTGTGTaGACTCAATGGAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPALGKGV*TQWRWC
Trigger: ACACCATCTCCATTGAGTTCACACACCCTTGCCAAG...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATACCAAGCCAGCCTGTGTaGAAGGCCTTTCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIPSQPV*KAFHPD
Trigger: GTCAGGATGAAAGGCCTTTCACACAGGCTGGCTTGG...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACGCGTGTTTCTCCTGGTaGCAGAAGTCAGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDACFSW*QKSVSS
Trigger: TGAGGACACTGACTTCTGTCACCAGGAGAAACACGC...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAAAGCTTTGGCTCCTGCTaGTGCTCTGCACAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPESFGSC*CSAQLR
Trigger: CCTGAGCTGTGCAGAGCAGCAGCAGGAGCCAAAGCT...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACGACGCAGGCCAGCAATaGTTTGGGCTCTGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDDAGQQ*FGLCQS
Trigger: ACTTTGACAGAGCCCAAAGCATTGCTGGCCTGCGTC...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATGTACTGCATCATGGCTaGGAAGTGGACATTCATCTC +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHVLHHG*EVDIHL
Trigger: GAGATGAATGTCCACTTCCCAGCCATGATGCAGTAC...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGGTACTGCATCATGGCTaGGAAGTGGACATTCATCTC +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAEVLHHG*EVDIHL
Trigger: GAGATGAATGTCCACTTCCCAGCCATGATGCAGTAC...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCTTCTGTACTGCATCATaGCTGGGAAGTGGACATTCA +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGFCTAS*LGSGHS
Trigger: TGAATGTCCACTTCCCAGCCATGATGCAGTACAGAA...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACACCAGTTCCTGGTCCTTaGGGACATCCTTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTPVPGP*GHPSVL
Trigger: CAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGG...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GTTAATGCTTCTGCCAGTGCCTTCCCTCTGAGAGTGCATGGAGCATATGCTTATAGGGTGTCTGTGGCCTaGGGATGCCGGCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VNASASAFPLRVHGAYAYRVSVA*GCRPSS
Trigger: ACTGGAAGGCCGGCATCCCCAGGCCACAGACACCCT...ATAAGCATATGCTCCATGCACTCTCAGAGGGAAGGCACTGGCAGAAGCATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGATTCAGGACAGAGTCTaGTTTGCTGGGGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLIQDRV*FAGDED
Trigger: GTCTTCATCCCCAGCAAACCAGACTCTGTCCTGAAT...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACTGTAGCTCAGGATCGTaGCTGAGGAAGACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDCSSGS*LRKTCC
Trigger: GCAACAGGTCTTCCTCAGCCACGATCCTGAGCTACA...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAGTTGGTATAGCCACCTaGCTGAGATGGGTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAVGIAT*LRWVVS
Trigger: TGACACTACCCATCTCAGCCAGGTGGCTATACCAAC...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCTTCAGATCAAAGAACTaGACTTCTGTGAGACCCACC +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGFRSKN*TSVRPT
Trigger: GGTGGGTCTCACAGAAGTCCAGTTCTTTGATCTGAA...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGCATGACATCCTCAGATaGAAACCTGCTCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGHDILR*KPALLF
Trigger: GAACAGAAGAGCAGGTTTCCATCTGAGGATGTCATG...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAGTTGGAGACTACACGTaGGTCTTTCCCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAVGDYT*VFPISW
Trigger: CCAGCTTATGGGAAAGACCCACGTGTAGTCTCCAAC...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATACCAGGTGGCTCACCATaGCAAGGATGCCGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIPGGSP*QGCRCT
Trigger: TGTACAACGGCATCCTTGCCATGGTGAGCCACCTGG...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAATGGGTCAGCAGTGCCTaGCTTCCTCCTCGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPEWVSSA*LPPRGS
Trigger: ACTACCTCGAGGAGGAAGCCAGGCACTGCTGACCCA...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
3UTR CAA 72 bp GCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTaGACCCATCCTGAATCAGGTTTGAACAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: AAHFLSSAGHMP*THPESGLNRGQ
Trigger: CTGTCCTCTGTTCAAACCTGATTCAGGATGGGTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAAGGATTCCGCTGGCTGTaGGCAGCTGAGCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKGFRWL*AAEPKL
Trigger: GAGCTTGGGCTCAGCTGCTCACAGCCAGCGGAATCC...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGCTGTACTGGTTCCCCTaGGGAGCTGAATATTTCTAT +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLLYWFP*GAEYFY
Trigger: ATAGAAATATTCAGCTCCTCAGGGGAACCAGTACAG...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACTCCCATCAGAGTTCCTaGGGCTTTGGCAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDSHQSS*GFGNFS
Trigger: GGAGAAATTGCCAAAGCCTCAGGAACTCTGATGGGA...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCATGTGCAAAATCAAAGTaGCAGTTGCCAGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPACAKSK*QLPGPF
Trigger: AAAGGGGCCTGGCAACTGTCACTTTGATTTTGCACA...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCTGTGCAAAATCAAAGTaGCAGTTGCCAGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALCAKSK*QLPGPF
Trigger: AAAGGGGCCTGGCAACTGTCACTTTGATTTTGCACA...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAACAGCTCCAGCCCTGTaGGGCCGATGTAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPTAPAL*GRCSRD
Trigger: ATCCCTACTACATCGGCCTCACAGGGCTGGAGCTGT...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCCCAGTGGCATCCTCATaGTTGCCAATCACATCTTCT +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALPVASS*LPITSS
Trigger: AGAAGATGTGATTGGCAAGCATGAGGATGCCACTGG...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATACAGCTGCATATGCTTTaGGGGTTGCTGACAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIQLHML*GLLTRV
Trigger: GACCCTTGTCAGCAACCCGCAAAGCATATGCAGCTG...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCGTCAAGATCCCCATCTaGTGTCCAGTAATTCCGAAC +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALVKIPI*CPVIPN
Trigger: GTTCGGAATTACTGGACAGCAGATGGGGATCTTGAC...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAGTCAAGATCCCCATCTaGTGTCCAGTAATTCCGAAC +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAVKIPI*CPVIPN
Trigger: GTTCGGAATTACTGGACAGCAGATGGGGATCTTGAC...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACTTTCTTTCCAGCCAGTaGTCAAGGCCTTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDFLSSQ*SRPCLS
Trigger: GCTCAGACAAGGCCTTGAGCACTGGCTGGAAAGAAA...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCCATAGAGGCAGGGGTTaGCAACAGTCTTACATCTTC +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALHRGRG*QQSYIF
Trigger: GAAGATGTAAGACTGTTGGCAACCCCTGCCTCTATG...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATACGGCTGCTCCTTTGCTaGTTCAGGAACTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIRLLLC*FRNSSR
Trigger: CCTAGATGAGTTCCTGAAGCAGCAAAGGAGCAGCCG...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAATAGTGTCTCCAAAGTaGTCAGGGGCTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTIVSPK*SGAPIR
Trigger: TCTGATGGGAGCCCCTGAGCACTTTGGAGACACTAT...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATCACCATGGCAAGGATaGCGTTGTACACAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTSPWQG*RCTQAG
Trigger: ACCTGCTTGTGTACAACGGCATCCTTGCCATGGTGA...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACTCACCATGGCAAGGATaGCGTTGTACACAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDSPWQG*RCTQAG
Trigger: ACCTGCTTGTGTACAACGGCATCCTTGCCATGGTGA...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGGCTGCACAGGGTCCTTaGCTTTCAAATGCTTTAGTA +
Preference number: 4 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAEAAQGP*LSNALV
Trigger: TACTAAAGCATTTGAAAGCCAAGGACCCTGTGCAGC...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATATCATGGCTGGGAAGTaGACATTCATCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHIMAGK*TFISVV
Trigger: CACAACAGAGATGAATGTCCACTTCCCAGCCATGAT...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGTTGGTATAGCCACCTaGCTGAGATGGGTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTVGIAT*LRWVVS
Trigger: TGACACTACCCATCTCAGCCAGGTGGCTATACCAAC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGTTCAGATCAAAGAACTaGACTTCTGTGAGACCCACC +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLFRSKN*TSVRPT
Trigger: GGTGGGTCTCACAGAAGTCCAGTTCTTTGATCTGAA...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCACTCTCTGCAAGGGGCTaGGAATTCCTCATGCCGGCT +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPLSARG*EFLMPA
Trigger: AGCCGGCATGAGGAATTCCCAGCCCCTTGCAGAGAG...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGTCCATAAGGGAGGACTaGGATTTTAAAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERSIRED*DFKVAV
Trigger: GACAGCGACTTTAAAATCCCAGTCCTCCCTTATGGA...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATTCCATAAGGGAGGACTaGGATTTTAAAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHSIRED*DFKVAV
Trigger: GACAGCGACTTTAAAATCCCAGTCCTCCCTTATGGA...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACTCAATGGAGATGGTGTaGGTCATGCCTGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDSMEMV*VMPGVK
Trigger: CTTCACACCAGGCATGACCCACACCATCTCCATTGA...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATACCCATAGAAGATGCCTaGCTCAGGTGTGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIPIEDA*LRCGDF
Trigger: GAAGTCACCACACCTGAGCCAGGCATCTTCTATGGG...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAATTGTTCTGGGACAATaGGATCCTCTCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTIVLGQ*DPLPML
Trigger: GAGCATGGGGAGAGGATCCCATTGTCCCAGAACAAT...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGCGCATTCACACTGTCTaGGAAGGCAGCAATATTGTT +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLRIHTV*EGSNIV
Trigger: AACAATATTGCTGCCTTCCCAGACAGTGTGAATGCG...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAAAAAAGGATGGTGTGGTaGGGCACGGTAGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPEKRMVW*GTVGSH
Trigger: GTGTGAGCCTACCGTGCCCCACCACACCATCCTTTT...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAAGTAATTCCGAACCTTaGTCATGGTCAGACCGAAGT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPASNSEP*SWSDRS
Trigger: ACTTCGGTCTGACCATGATCAAGGTTCGGAATTACT...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGGGGTTTGGGCTTCCTaGCTGTCTGTTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPGVWAS*LSVSCP
Trigger: TGGGCAAGAAACAGACAGTCAGGAAGCCCAAACCCC...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAGCTTCAGTTCTGATCTaGACAGATTTCTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAASVLI*TDFWCH
Trigger: ATGGCACCAGAAATCTGTGCAGATCAGAACTGAAGC...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCTGGCATCCTCATGCTTaGCAATCACATCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALWHPHA*QSHLLV
Trigger: CACAAGAAGATGTGATTGGCAAGCATGAGGATGCCA...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGACTCCCACAAGTTTATaGTGTTGTCTGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLTPTSL*CCLLPK
Trigger: TTTGGGAAGCAGACAACAGCATAAACTTGTGGGAGT...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCATCATGGCTGGGAAGTaGACATTCATCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALIMAGK*TFISVV
Trigger: CACAACAGAGATGAATGTCCACTTCCCAGCCATGAT...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAATGGCCTTCAGCAGACTaGACCAGGATTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPEWPSAD*TRILLV
Trigger: CACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCA...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATATACTGGCTTCTCTGTTaGTATAGCCACCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIYWLLC*YSHLAE
Trigger: CTCAGCCAGGTGGCTATACCAACAGAGAAGCCAGTA...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAAGACTTTCCAGCTGTTaGATCAAAGAGGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTRLSSC*IKEGSS
Trigger: AGAGGAGCCCTCTTTGATCCAACAGCTGGAAAGTCT...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAAGCCACAGGGCATGAGTaGGGCCTCGTAGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKATGHE*GLVVHA
Trigger: AGCATGGACTACGAGGCCCCACTCATGCCCTGTGGC...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATACAGCTGGACAGCAGCTaGAACTGGAAAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIQLDSS*NWKMKP
Trigger: TGGCTTCATTTTCCAGTTCCAGCTGCTGTCCAGCTG...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGCAGCAATATTGTTCTaGGACAATGGGATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTAAILF*DNGILS
Trigger: GGAGAGGATCCCATTGTCCCAGAACAATATTGCTGC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCACGCATTCACACTGTCTaGGAAGGCAGCAATATTGTT +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPARIHTV*EGSNIV
Trigger: AACAATATTGCTGCCTTCCCAGACAGTGTGAATGCG...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCATTTCCACTTTTCCTCTaGATTTGGTACTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAFPLFL*IWYWLL
Trigger: GAGAAGCCAGTACCAAATTCAGAGGAAAAGTGGAAA...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACAGTAATTCCGAACCTTaGTCATGGTCAGACCGAAGT +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDSNSEP*SWSDRS
Trigger: ACTTCGGTCTGACCATGATCAAGGTTCGGAATTACT...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCATCATTCCTCTCTCTCTaGAGGTCCACGGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPSFLSL*RSTGMV
Trigger: TACCATCCCCGTGGACCTTCAGAGAGAGAGGAATGA...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACCTGTACTGGTTCCCCTaGGGAGCTGAATATTTCTAT +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDLYWFP*GAEYFY
Trigger: ATAGAAATATTCAGCTCCTCAGGGGAACCAGTACAG...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATACCTTCAAAGATGCACTaGGTATCCAACAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIPSKMH*VSNSIV
Trigger: CACGATGCTGTTGGATACTCAGTGCATCTTTGAAGG...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TATAAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTAGCGCTTCTTCAGGCTaGAGGCCACACAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: YKHRPSIWRSTSRSVLGASASSG*RPHRLS
Trigger: TGAGAGCCTGTGTGGCCTTCAGCCTGAAGAAGCGCT...AGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAACACAGCTGGGGGCTGTaGATTCAGGACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKHSWGL*IQDRVW
Trigger: CCAGACTCTGTCCTGAATCCACAGCCCCCAGCTGTG...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp GTTAATGCTTCTGCCAGTGCCTTCCCTCTGAGAGTGCATGGAGCATATGCTTATAGGATCGGTGGTCACTaGAGTAGCAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VNASASAFPLRVHGAYAYRIGGH*SSRKQL
Trigger: GAGCTGCTTCCTGCTACTCCAGTGACCACCGATCCT...ATAAGCATATGCTCCATGCACTCTCAGAGGGAAGGCACTGGCAGAAGCATTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAAGCCACCTGGCTGAGATaGGTAGTGTCACTTTCCATA +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPEATWLR*VVSLSI
Trigger: TATGGAAAGTGACACTACCCATCTCAGCCAGGTGGC...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATAAGACTTTCCAGCTGTTaGATCAAAGAGGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIRLSSC*IKEGSS
Trigger: AGAGGAGCCCTCTTTGATCCAACAGCTGGAAAGTCT...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACCATCCAAACAGAATATaGCCTCCAGGATGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDHPNRI*PPGCPH
Trigger: ATGAGGACATCCTGGAGGCCATATTCTGTTTGGATG...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp CACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGAACAGCTGGACAGCAGCTaGAACTGGAAAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: HRPSIWRSTSRSVLGAPEQLDSS*NWKMKP
Trigger: TGGCTTCATTTTCCAGTTCCAGCTGCTGTCCAGCTG...TTCTGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCGAGGTAGTGATGACCTaGTTTTCATTCATCATTTGT +
Preference number: 4 (lower is better)
Translates to: DSSPLSLHALPALGVPAGEVVMT*FSFIIC
Trigger: ACAAATGATGAATGAAAACCAGGTCATCACTACCTC...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGATCCGGTTTCTCTGCTaGAGCAATATTAAATACTCA +
Preference number: 4 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLIRFLC*SNIKYS
Trigger: TGAGTATTTAATATTGCTTCAGCAGAGAAACCGGAT...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCACAGGAGTATCACCCATaGCATCCTCAGATGGAAACC +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPQEYHP*HPQMET
Trigger: GGTTTCCATCTGAGGATGTCATGGGTGATACTCCTG...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCACTTGGCAAGGGTGTGTaGACTCAATGGAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPLGKGV*TQWRWC
Trigger: ACACCATCTCCATTGAGTTCACACACCCTTGCCAAG...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACTGTAATTCCACAGTTTaGTCATTGACACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDCNSTV*SLTQWW
Trigger: CCACCACTGTGTCAATGATCAAACTGTGGAATTACA...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACACTCCCACAAGTTTATaGTGTTGTCTGCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDTPTSL*CCLLPK
Trigger: TTTGGGAAGCAGACAACAGCATAAACTTGTGGGAGT...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCATTTCTCCTTCAAAGATaGACTGAGTATCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAFLLQR*TEYPTA
Trigger: TGCTGTTGGATACTCAGTGCATCTTTGAAGGAGAAA...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAAGAGGAGGTTCAATGTaGAGACGAGAGCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPRGGSM*RREPAS
Trigger: TGAAGCTGGCTCTCGTCTCCACATTGAACCTCCTCT...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp TATAAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTTCCGGCTTCCAGATCTaGAACAGGCTCTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: YKHRPSIWRSTSRSVLGASGFQI*NRLSPA
Trigger: AGCAGGAGAGAGCCTGTTCCAGATCTGGAAGCCGGA...AGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATACATCCAAACAGAATATaGCCTCCAGGATGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIHPNRI*PPGCPH
Trigger: ATGAGGACATCCTGGAGGCCATATTCTGTTTGGATG...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAACCAGGTGGCTCACCATaGCAAGGATGCCGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKPGGSP*QGCRCT
Trigger: TGTACAACGGCATCCTTGCCATGGTGAGCCACCTGG...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp GTTAATGCTTCTGCCAGTGCCTTCCCTCTGAGAGTGCATGGAGCATATGCTTATAGAACTGGACTTCTGTaGGACCCACCCATGATGCAT +
Preference number: 4 (lower is better)
Translates to: VNASASAFPLRVHGAYAYRTGLL*DPPMMH
Trigger: ATGCATCATGGGTGGGTCTCACAGAAGTCCAGTTCT...ATAAGCATATGCTCCATGCACTCTCAGAGGGAAGGCACTGGCAGAAGCATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAACATCACCATGGCTACTaGTGGCTTCCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKHHHGY*WLPSSG
Trigger: CCCTGAAGAAGGAAGCCAGCAGTAGCCATGGTGATG...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp TATAAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTTGCTCACCATACCACTaGAACCAAGGCAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: YKHRPSIWRSTSRSVLGACSPYH*NQGSVW
Trigger: CCAGACACTGCCTTGGTTGCAGTGGTATGGTGAGCA...AGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAAGACGCAGGCCAGCAATaGTTTGGGCTCTGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKDAGQQ*FGLCQS
Trigger: ACTTTGACAGAGCCCAAAGCATTGCTGGCCTGCGTC...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAATTCAGGACAGAGTCTaGTTTGCTGGGGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPIQDRV*FAGDED
Trigger: GTCTTCATCCCCAGCAAACCAGACTCTGTCCTGAAT...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp TATAAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTATTCCGTCCATGGCTTaGCTGACAGCTTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YKHRPSIWRSTSRSVLGAIPSMA*LTALAP
Trigger: AGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGAAT...AGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAACCGAGTTGGCCCCATTaGCATAGACAGAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKPSWPH*HRQRNL
Trigger: AAGGTTTCTCTGTCTATGTCAATGGGGCCAACTCGG...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATAGTCCACATCATGAGGTaGGACATAAAGCTTTATGTT +
Preference number: 4 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIVHIMR*DIKLYV
Trigger: AACATAAAGCTTTATGTCTCACCTCATGATGTGGAC...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GTTAATGCTTCTGCCAGTGCCTTCCCTCTGAGAGTGCATGGAGCATATGCTTATACTGGACCAGGATTTTaGTGGTGGTTCCTTGGTATC +
Preference number: 4 (lower is better)
Translates to: VNASASAFPLRVHGAYAYTGPGF*WWFLGI
Trigger: GATACCAAGGAACCACCAGCAAAATCCTGGTCCAGT...ATAAGCATATGCTCCATGCACTCTCAGAGGGAAGGCACTGGCAGAAGCATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR GCA 90 bp GTTAATGCTTCTGCCAGTGCCTTCCCTCTGAGAGTGCATGGAGCATATGCTTATCATAGAGGCAGGGGTTaGCAACAGTCTTACATCTTC +
Preference number: 4 (lower is better)
Translates to: VNASASAFPLRVHGAYAYHRGRG*QQSYIF
Trigger: GAAGATGTAAGACTGTTGGCAACCCCTGCCTCTATG...ATAAGCATATGCTCCATGCACTCTCAGAGGGAAGGCACTGGCAGAAGCATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAAAGAGGAGGTTCAATGTaGAGACGAGAGCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKRGGSM*RREPAS
Trigger: TGAAGCTGGCTCTCGTCTCCACATTGAACCTCCTCT...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCATTCTGTACTGCATCATaGCTGGGAAGTGGACATTCA +
Preference number: 4 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPFCTAS*LGSGHS
Trigger: TGAATGTCCACTTCCCAGCCATGATGCAGTACAGAA...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAAATTGTTCTGGGACAATaGGATCCTCTCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKIVLGQ*DPLPML
Trigger: GAGCATGGGGAGAGGATCCCATTGTCCCAGAACAAT...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAACATGACATCCTCAGATaGAAACCTGCTCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKHDILR*KPALLF
Trigger: GAACAGAAGAGCAGGTTTCCATCTGAGGATGTCATG...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAATTTCCACTTTTCCTCTaGATTTGGTACTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKFPLFL*IWYWLL
Trigger: GAGAAGCCAGTACCAAATTCAGAGGAAAAGTGGAAA...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR TCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAATGTAATTCCACAGTTTaGTCATTGACACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKCNSTV*SLTQWW
Trigger: CCACCACTGTGTCAATGATCAAACTGTGGAATTACA...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR GCA 90 bp GTTAATGCTTCTGCCAGTGCCTTCCCTCTGAGAGTGCATGGAGCATATGCTTATTTTCTCCTTCAAAGATaGACTGAGTATCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: VNASASAFPLRVHGAYAYFLLQR*TEYPTA
Trigger: TGCTGTTGGATACTCAGTGCATCTTTGAAGGAGAAA...ATAAGCATATGCTCCATGCACTCTCAGAGGGAAGGCACTGGCAGAAGCATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR TCA 90 bp TATAAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTATCCGGTTTCTCTGCTaGAGCAATATTAAATACTCA +
Preference number: 4 (lower is better)
Translates to: YKHRPSIWRSTSRSVLGAIRFLC*SNIKYS
Trigger: TGAGTATTTAATATTGCTTCAGCAGAGAAACCGGAT...AGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CCA 90 bp TCAGCTGGCTCCGAATTAAAACATCTGTACAGCTGCTGGGTGTTGCTGCTTAAAGAGGTAGTGATGACCTaGTTTTCATTCATCATTTGT +
Preference number: 4 (lower is better)
Translates to: SAGSELKHLYSCWVLLLKEVVMT*FSFIIC
Trigger: ACAAATGATGAATGAAAACCAGGTCATCACTACCTC...TTTAAGCAGCAACACCCAGCAGCTGTACAGATGTTTTAATTCGGAGCCAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp GCTCTAGCCCTGGTACCTGGTCCTGGGCACCCAAGCCAGCCTGTGTaGAAGGCCTTTCATCCTGACCTTCACCGTCGGCAGTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ALALVPGPGHPSQPV*KAFHPDLHRRQCWA
Trigger: GGCCCAGCACTGCCGACGGTGAAGGTCAGGATGAAAGGCCTTTCACACAGGCTGGCTTGGGTGCCCAGGACCAGGTACCAGGGCTAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TGGGGCACGGTAGGCTCACACGTGGGCAGGATGCCCCCAACCAGGTaGCTCACCATGGCAAGGATGCCGTTGTACACAAGCAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: WGTVGSHVGRMPPTR*LTMARMPLYTSRSS
Trigger: GGATGACCTGCTTGTGTACAACGGCATCCTTGCCATGGTGAGCCACCTGGTTGGGGGCATCCTGCCCACGTGTGAGCCTACCGTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp GTTCCAGGGCAGAGATTCTGCCCCGGTGGGCACGGTCGAAGGCAGTaGGGGAGTCCCATGATGCATGCAGTGCGTGTTCCTGCTCACCAT +
Preference number: 5 (lower is better)
Translates to: VPGQRFCPGGHGRRQ*GSPMMHAVRVPAHH
Trigger: ATGGTGAGCAGGAACACGCACTGCATGCATCATGGGACTCCCTCACTGCCTTCGACCGTGCCCACCGGGGCAGAATCTCTGCCCTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TGGGAGGCCTGGGTGTCTTCTTTGCTGGCTGGCCGGTCATCACCATaGCTACTGCTGGCTTCCTTCTTCAGGGCCCTCCTCCCACTAGCA +
Preference number: 5 (lower is better)
Translates to: WEAWVSSLLAGRSSP*LLLASFFRALLPLA
Trigger: TGCTAGTGGGAGGAGGGCCCTGAAGAAGGAAGCCAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTATCAGGGATGTCCTCCTaGGCCTTCAGCAGACTGGAC +
Preference number: 5 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLSGMSS*AFSRLD
Trigger: GTCCAGTCTGCTGAAGGCCAAGGAGGACATCCCTGA...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGGCTGCTAGTCCTCCCTaGCTCACGACGAGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGAASPP*LTTRAF
Trigger: AAAGGCCCTCGTCGTGAGCAAGGGAGGACTAGCAGC...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTATGCCGGCTGCTCCTTaGCTGCTTCAGGAACTCATC +
Preference number: 5 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPMPAAP*LLQELI
Trigger: GATGAGTTCCTGAAGCAGCAAAGGAGCAGCCGGCAT...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CAA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGAGAGAGCTGGTGTGGTaGAATGGGCAAGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGRELVW*NGQGLA
Trigger: GGCGAGGCCTTGCCCATTCAACCACACCAGCTCTCT...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp GATTCTGCCCCGGTGGGCACGGTCGAAGGCAGTGAGGGAGTCCCATaGTGCATGCAGTGCGTGTTCCTGCTCACCATACCACTGCAACCA +
Preference number: 5 (lower is better)
Translates to: DSAPVGTVEGSEGVP*CMQCVFLLTIPLQP
Trigger: TGGTTGCAGTGGTATGGTGAGCAGGAACACGCACTGCATGCATCATGGGACTCCCTCACTGCCTTCGACCGTGCCCACCGGGGCAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp TGGTCCTGGGCACCCAAGCCAGCCTGTGTGAAAGGCCTTTCATCCTaGCCTTCACCGTCGGCAGTGCTGGGCCTCCTTAGCGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WSWAPKPACVKGLSS*PSPSAVLGLLSASS
Trigger: TGAAGAAGCGCTAAGGAGGCCCAGCACTGCCGACGGTGAAGGTCAGGATGAAAGGCCTTTCACACAGGCTGGCTTGGGTGCCCAGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp ACAATGGGATCCTCTCCCCATGCTCGTCATACAGCTCCAGCCCTGTaGGGCCGATGTAGTAGGGATCGCCCCAGCTGGACAGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TMGSSPHARHTAPAL*GRCSRDRPSWTAAG
Trigger: TCCAGCTGCTGTCCAGCTGGGGCGATCCCTACTACATCGGCCTCACAGGGCTGGAGCTGTATGACGAGCATGGGGAGAGGATCCCATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp ACGTGGGCAGGATGCCCCCAACCAGGTGGCTCACCATGGCAAGGATaGCGTTGTACACAAGCAGGTCATCCACCAGCAGGCCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: TWAGCPQPGGSPWQG*RCTQAGHPPAGQTP
Trigger: AGGAGTTTGGCCTGCTGGTGGATGACCTGCTTGTGTACAACGGCATCCTTGCCATGGTGAGCCACCTGGTTGGGGGCATCCTGCCCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp CAACCAAGGCAGTGTCTGGGAGGCCTGGGTGTCTTCTTTGCTGGCTaGCCGGTCATCACCATGGCTACTGCTGGCTTCCTTCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: QPRQCLGGLGVFFAG*PVITMATAGFLLQG
Trigger: GCCCTGAAGAAGGAAGCCAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp ACCCATCTCTGTGGAGGGCTCTGGCTCCTCCTCTCTGCAAGGGGCTaGGAATTCCTCATGCCGGCTGCTCCTTTGCTGCTTCAGGAACTC +
Preference number: 5 (lower is better)
Translates to: THLCGGLWLLLSARG*EFLMPAAPLLLQEL
Trigger: GAGTTCCTGAAGCAGCAAAGGAGCAGCCGGCATGAGGAATTCCCAGCCCCTTGCAGAGAGGAGGAGCCAGAGCCCTCCACAGAGATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCCTGGGTGTCTTCTTaGCTGGCTGGCCGGTCATCA +
Preference number: 5 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLAWVSS*LAGRSS
Trigger: TGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGC...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGGCCTGGGTGTCTTCTTaGCTGGCTGGCCGGTCATCA +
Preference number: 5 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAEAWVSS*LAGRSS
Trigger: TGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGC...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATAGAGAGCTGGTGTGGTaGAATGGGCAAGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHRELVW*NGQGLA
Trigger: GGCGAGGCCTTGCCCATTCAACCACACCAGCTCTCT...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp GCTGTTGTCTGCTTCCCAAAGGGCTCATTCCGTCCATGGCTTGGCTaGCAGCTTTGGCTCCTGCTGCTGCTCTGCACAGCTCAGGATCGG +
Preference number: 5 (lower is better)
Translates to: AVVCFPKGSFRPWLG*QLWLLLLLCTAQDR
Trigger: CCGATCCTGAGCTGTGCAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGAATGAGCCCTTTGGGAAGCAGACAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp GCGCATTCACACTGTCTGGGAAGGCAGCAATATAGCCACAGGGCATaGGTGGGGCCTCGTAGTCCATGCTGGCTCGCTCCAGGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: AHSHCLGRQQYSHRA*VGPRSPCWLAPGSL
Trigger: CAAAGAGCCTGGAGCGAGCCAGCATGGACTACGAGGCCCCACTCATGCCCTGTGGCTATATTGCTGCCTTCCCAGACAGTGTGAATGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132204.3
CDS GCA 90 bp CAAAGGGCTCATTCCGTCCATGGCTTGGCTGACAGCTTTGGCTCCTaGTGCTGCTCTGCACAGCTCAGGATCGGTGGTCACTGGAGTAGC +
Preference number: 5 (lower is better)
Translates to: QRAHSVHGLADSFGS*CCSAQLRIGGHWSS
Trigger: GCTACTCCAGTGACCACCGATCCTGAGCTGTGCAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGAATGAGCCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp ACCACTGCAACCAAGGCAGTGTCTGGGAGGCCTGGGTGTCTTCTTTaGTGGCTGGCCGGTCATCACCATGGCTACTGCTGGCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TTATKAVSGRPGCLL*WLAGHHHGYCWLPS
Trigger: AGAAGGAAGCCAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTTGCAGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp TCGAAGGCAGTGAGGGAGTCCCATGATGCATGCAGTGCGTGTTCCTaGTCACCATACCACTGCAACCAAGGCAGTGTCTGGGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SKAVRESHDACSACS*SPYHCNQGSVWEAW
Trigger: CCAGGCCTCCCAGACACTGCCTTGGTTGCAGTGGTATGGTGAGCAGGAACACGCACTGCATGCATCATGGGACTCCCTCACTGCCTTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp GAGGGCTCTGGCTCCTCCTCTCTGCAAGGGGCTGGGAATTCCTCATaGCGGCTGCTCCTTTGCTGCTTCAGGAACTCATCTAGGATGTCC +
Preference number: 5 (lower is better)
Translates to: EGSGSSSLQGAGNSS*RLLLCCFRNSSRMS
Trigger: GGACATCCTAGATGAGTTCCTGAAGCAGCAAAGGAGCAGCCGGCATGAGGAATTCCCAGCCCCTTGCAGAGAGGAGGAGCCAGAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TCCTCAATAGAGTCGTACTCGTCGCTGGAGCCGTCCTCTTGGGTCTaGAGGCTTGTGCTGAGCCCCAGGCCTTTTCTCAGCTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: SSIESYSSLEPSSWV*RLVLSPRPFLSSCV
Trigger: CACACAGGAGCTGAGAAAAGGCCTGGGGCTCAGCACAAGCCTCCAGACCCAAGAGGACGGCTCCAGCGACGAGTACGACTCTATTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp ACGTCTTCCTCAATAGAGTCGTACTCGTCGCTGGAGCCGTCCTCTTaGGTCTGGAGGCTTGTGCTGAGCCCCAGGCCTTTTCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TSSSIESYSSLEPSS*VWRLVLSPRPFLSS
Trigger: GGAGCTGAGAAAAGGCCTGGGGCTCAGCACAAGCCTCCAGACCCAAGAGGACGGCTCCAGCGACGAGTACGACTCTATTGAGGAAGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp GGGTGTCTGTGGCCTGGGGATGCCGGCCTTCCAGTTCCTGGTCCTTaGGGACATCCTTCTGTACTGCATCATGGCTGGGAAGTGGACATT +
Preference number: 5 (lower is better)
Translates to: GCLWPGDAGLPVPGP*GHPSVLHHGWEVDI
Trigger: AATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCGGCATCCCCAGGCCACAGACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp ACCACAAGGGTGTCTGTGGCCTGGGGATGCCGGCCTTCCAGTTCCTaGTCCTTGGGGACATCCTTCTGTACTGCATCATGGCTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: TTRVSVAWGCRPSSS*SLGTSFCTASWLGS
Trigger: ACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCGGCATCCCCAGGCCACAGACACCCTTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp CTTTGCGGGTTGCTGACAAGGGTCTATCTCTCCGGCTTCCAGATCTaGAACAGGCTCTCTCCTGCTCTGGGAACACAGCTGGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LCGLLTRVYLSGFQI*NRLSPALGTQLGAV
Trigger: CACAGCCCCCAGCTGTGTTCCCAGAGCAGGAGAGAGCCTGTTCCAGATCTGGAAGCCGGAGAGATAGACCCTTGTCAGCAACCCGCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp GGGTCCGTGAGTCATCGTTGTACTCGGGCAGGTCATTTAAGTCCCTaGGAGAGGCAGAGAGCTGGTGTGGTTGAATGGGCAAGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: GSVSHRCTRAGHLSP*ERQRAGVVEWARPR
Trigger: GCGAGGCCTTGCCCATTCAACCACACCAGCTCTCTGCCTCTCCCAGGGACTTAAATGACCTGCCCGAGTACAACGATGACTCACGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTATTTGCTGGTGGTTCCTaGGTATCCTGCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLFAGGS*VSCCGL
Trigger: CAGTCCACAGCAGGATACCAAGGAACCACCAGCAAA...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp TGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCCAACCCTGAAGTGTGAAGGACATTCAGGGATGTCCTCCTaGGCCTTCAGCAGACTGGAC +
Preference number: 5 (lower is better)
Translates to: CSSSPWGPSWPTLKCEGHSGMSS*AFSRLD
Trigger: GTCCAGTCTGCTGAAGGCCAAGGAGGACATCCCTGA...ATGTCCTTCACACTTCAGGGTTGGCCAGCTGGGACCCCAAGGGCTGGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCGCTTGGCTGACAGCTTaGGCTCCTGCTGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALAWLTA*APAAAL
Trigger: CAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGC...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCATGCCGGCTGCTCCTTaGCTGCTTCAGGAACTCATC +
Preference number: 5 (lower is better)
Translates to: DSSPLSLHALPALGVPAGMPAAP*LLQELI
Trigger: GATGAGTTCCTGAAGCAGCAAAGGAGCAGCCGGCAT...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTAGTCCGTGAGTCATCGTaGTACTCGGGCAGGTCATTT +
Preference number: 5 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLVRESS*YSGRSF
Trigger: AAATGACCTGCCCGAGTACAACGATGACTCACGGAC...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGCTCGCTCCAGGCTCTTaGCATCTAGTCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERLAPGS*HLVSWW
Trigger: CCACCAGGAGACTAGATGCAAAGAGCCTGGAGCGAG...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTACCATCGCTGGTGTCGTaGACTTGGTCGATAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLPSLVS*TWSISL
Trigger: CAAGCTTATCGACCAAGTCAACGACACCAGCGATGG...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp GGCAGGTCATTTAAGTCCCTGGGAGAGGCAGAGAGCTGGTGTGGTTaGATGGGCAAGGCCTCGCCGTCCTTGCCTACTACTTCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: GRSFKSLGEAESWCG*MGKASPSLPTTSRP
Trigger: TGGCCTAGAAGTAGTAGGCAAGGACGGCGAGGCCTTGCCCATTCAACCACACCAGCTCTCTGCCTCTCCCAGGGACTTAAATGACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp GCACAGCCGAGGCATCTTCCTCTCGGTCCTCAGCTGCATATGCTTTaGGGGTTGCTGACAAGGGTCTATCTCTCCGGCTTCCAGATCTGG +
Preference number: 5 (lower is better)
Translates to: AQPRHLPLGPQLHML*GLLTRVYLSGFQIW
Trigger: CCAGATCTGGAAGCCGGAGAGATAGACCCTTGTCAGCAACCCGCAAAGCATATGCAGCTGAGGACCGAGAGGAAGATGCCTCGGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp GGGGCTCTCTCTTCAGTGATGACATTCCAGCTGCTAGTCCTCCCTTaGTCACGACGAGGGCCTTTTTCCCTGGTCTCCACCTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GALSSVMTFQLLVLP*SRRGPFSLVSTSPG
Trigger: TCCTGGAGAGGTGGAGACCAGGGAAAAAGGCCCTCGTCGTGAGCAAGGGAGGACTAGCAGCTGGAATGTCATCACTGAAGAGAGAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp TCTCTGCAAGGGGCTGGGAATTCCTCATGCCGGCTGCTCCTTTGCTaGTTCAGGAACTCATCTAGGATGTCCCCCTGTGGTTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SLQGAGNSSCRLLLC*FRNSSRMSPCGSRA
Trigger: TGCCCTGGAACCACAGGGGGACATCCTAGATGAGTTCCTGAAGCAGCAAAGGAGCAGCCGGCATGAGGAATTCCCAGCCCCTTGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp GAGATGGTGTGGGTCATGCCTGGTGTGAAGGGGGCCAGCCAGACATaGATGTCATCCTGGGTCCTGTTCACCCCATCAATGAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: EMVWVMPGVKGASQT*MSSWVLFTPSMRLE
Trigger: CTCCAACCTCATTGATGGGGTGAACAGGACCCAGGATGACATGCATGTCTGGCTGGCCCCCTTCACACCAGGCATGACCCACACCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp ACTGCAACCAAGGCAGTGTCTGGGAGGCCTGGGTGTCTTCTTTGCTaGCTGGCCGGTCATCACCATGGCTACTGCTGGCTTCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: TATKAVSGRPGCLLC*LAGHHHGYCWLPSS
Trigger: TGAAGAAGGAAGCCAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TGGGATTTTAAAGTCGCTGTCACCACCCATCTCTGTGGAGGGCTCTaGCTCCTCCTCTCTGCAAGGGGCTGGGAATTCCTCATGCCGGCT +
Preference number: 5 (lower is better)
Translates to: WDFKVAVTTHLCGGL*LLLSARGWEFLMPA
Trigger: AGCCGGCATGAGGAATTCCCAGCCCCTTGCAGAGAGGAGGAGCCAGAGCCCTCCACAGAGATGGGTGGTGACAGCGACTTTAAAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp AGTCCATGCTGGCTCGCTCCAGGCTCTTTGCATCTAGTCTCCTGGTaGGTGCTGGTGGTAGCCGGGTCTGTAGGTAGTCCCCAAAAAGGA +
Preference number: 5 (lower is better)
Translates to: SPCWLAPGSLHLVSW*VLVVAGSVGSPQKG
Trigger: TCCTTTTTGGGGACTACCTACAGACCCGGCTACCACCAGCACCCACCAGGAGACTAGATGCAAAGAGCCTGGAGCGAGCCAGCATGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CCA 90 bp CGTAGTCCATGCTGGCTCGCTCCAGGCTCTTTGCATCTAGTCTCCTaGTGGGTGCTGGTGGTAGCCGGGTCTGTAGGTAGTCCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: RSPCWLAPGSLHLVS*WVLVVAGSVGSPQK
Trigger: TTTTTGGGGACTACCTACAGACCCGGCTACCACCAGCACCCACCAGGAGACTAGATGCAAAGAGCCTGGAGCGAGCCAGCATGGACTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS-3UTR CAA 90 bp CCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGCTCCTCAGCAGTCCAGTTCCTGGTCCTaGGGGACATCCTTCTGTACT +
Preference number: 5 (lower is better)
Translates to: PSGLQRHWIEEEQLAPQQSSSWS*GTSFCT
Trigger: AGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGA...CTGCTGAGGAGCCAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACGCTTGGCTGACAGCTTaGGCTCCTGCTGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDAWLTA*APAAAL
Trigger: CAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGC...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGCTCACTAAGTCCCTGTaGACAAGGCACCCCAGTTCG +
Preference number: 5 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERLTKSL*TRHPSS
Trigger: CGAACTGGGGTGCCTTGTCAACAGGGACTTAGTGAG...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGCCAGTGCTCAAGGCCTaGTCTGAGCTCTCATTCCTC +
Preference number: 5 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAEPVLKA*SELSFL
Trigger: GAGGAATGAGAGCTCAGACAAGGCCTTGAGCACTGG...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACGCTGCTAGTCCTCCCTaGCTCACGACGAGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDAASPP*LTTRAF
Trigger: AAAGGCCCTCGTCGTGAGCAAGGGAGGACTAGCAGC...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGGCTTTGGAGAATGCTTaGGGGGCTCTCTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGALENA*GALSSV
Trigger: CACTGAAGAGAGAGCCCCCAAAGCATTCTCCAAAGC...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCACTCGCTCCAGGCTCTTaGCATCTAGTCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPALAPGS*HLVSWW
Trigger: CCACCAGGAGACTAGATGCAAAGAGCCTGGAGCGAG...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTGAGCCTGGGTCAGGGGCTGCCTAGGACTTGGATGCCAGAGGCCCTGCTCTTAGGGAAGGCAGCAATATaGTTCTGGGACAATGGGATC +
Preference number: 5 (lower is better)
Translates to: LSLGQGLPRTWMPEALLLGKAAI*FWDNGI
Trigger: GATCCCATTGTCCCAGAACAATATTGCTGCCTTCCC...TAAGAGCAGGGCCTCTGGCATCCAAGTCCTAGGCAGCCCCTGACCCAGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGGCTGGTGTCGTTGACTaGGTCGATAAGCTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGAGVVD*VDKLVR
Trigger: CCTGACAAGCTTATCGACCAAGTCAACGACACCAGC...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGCCATCGCTGGTGTCGTaGACTTGGTCGATAAGCTTG +
Preference number: 5 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGPSLVS*TWSISL
Trigger: CAAGCTTATCGACCAAGTCAACGACACCAGCGATGG...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp GATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGTCCCAGCTGGCATGGCAAGGATGCCGTaGTACACAAGCAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: DSSPLSLHALPALGVPAGMARMP*YTSRSS
Trigger: GGATGACCTGCTTGTGTACAACGGCATCCTTGCCAT...GCCAGCTGGGACCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCAGCACCGCCAACGCCTaGAGGTCTCCTTCTCACGTA +
Preference number: 5 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALSTANA*RSPSHV
Trigger: TACGTGAGAAGGAGACCTCAAGGCGTTGGCGGTGCT...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp CCTTCACCGTCGGCAGTGCTGGGCCTCCTTAGCGCTTCTTCAGGCTaGAGGCCACACAGGCTCTCAGCATCCATGTCAAAAGTATCATCC +
Preference number: 5 (lower is better)
Translates to: PSPSAVLGLLSASSG*RPHRLSASMSKVSS
Trigger: GGATGATACTTTTGACATGGATGCTGAGAGCCTGTGTGGCCTTCAGCCTGAAGAAGCGCTAAGGAGGCCCAGCACTGCCGACGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp TCCTGTGACCCCTCAGCCTGTGAGGCACTTCTGGAGAAGTCTGTATaGACAGCTTTCCGTGGTGATGTCTTCAGCTCCGAGTTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SCDPSACEALLEKSV*TAFRGDVFSSELAP
Trigger: TGGGGCCAACTCGGAGCTGAAGACATCACCACGGAAAGCTGTGCATACAGACTTCTCCAGAAGTGCCTCACAGGCTGAGGGGTCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000148701.4
CDS GCA 90 bp GGTGCCATCCTCGGCGCTGGACTTTTCCTGGTGCTGTCCTGGAGCTaGGTCTTAAGACTTCTTCGGCTTCTCGGAATAGGGTTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: GAILGAGLFLVLSWS*VLRLLRLLGIGFFV
Trigger: GACGAAGAACCCTATTCCGAGAAGCCGAAGAAGTCTTAAGACGCAGCTCCAGGACAGCACCAGGAAAAGTCCAGCGCCGAGGATGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp AAGGGTCTATCTCTCCGGCTTCCAGATCTGGAACAGGCTCTCTCCTaGTCTGGGAACACAGCTGGGGGCTGTGGATTCAGGACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: KGLSLRLPDLEQALS*SGNTAGGCGFRTES
Trigger: AGACTCTGTCCTGAATCCACAGCCCCCAGCTGTGTTCCCAGAGCAGGAGAGAGCCTGTTCCAGATCTGGAAGCCGGAGAGATAGACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp GAGTCCCATGATGCATGCAGTGCGTGTTCCTGCTCACCATACCACTaGAACCAAGGCAGTGTCTGGGAGGCCTGGGTGTCTTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: ESHDACSACSCSPYH*NQGSVWEAWVSSLL
Trigger: CAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTTGCAGTGGTATGGTGAGCAGGAACACGCACTGCATGCATCATGGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TTGGCAAGGGTGTGTGAACTCAATGGAGATGGTGTGGGTCATGCCTaGTGTGAAGGGGGCCAGCCAGACATGCATGTCATCCTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: LARVCELNGDGVGHA*CEGGQPDMHVILGP
Trigger: AGGACCCAGGATGACATGCATGTCTGGCTGGCCCCCTTCACACCAGGCATGACCCACACCATCTCCATTGAGTTCACACACCCTTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCACCAGTGCTCAAGGCCTaGTCTGAGCTCTCATTCCTC +
Preference number: 5 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAPVLKA*SELSFL
Trigger: GAGGAATGAGAGCTCAGACAAGGCCTTGAGCACTGG...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGTCCGTGAGTCATCGTaGTACTCGGGCAGGTCATTT +
Preference number: 5 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLVRESS*YSGRSF
Trigger: AAATGACCTGCCCGAGTACAACGATGACTCACGGAC...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGACTTGGTCGATAAGCTaGTCAGGGGTTCTCACATCC +
Preference number: 5 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGTWSIS*SGVLTS
Trigger: GGATGTGAGAACCCCTGACAAGCTTATCGACCAAGT...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAAGCACCGCCAACGCCTaGAGGTCTCCTTCTCACGTA +
Preference number: 5 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTSTANA*RSPSHV
Trigger: TACGTGAGAAGGAGACCTCAAGGCGTTGGCGGTGCT...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp CAGCCAGTGCTCAAGGCCTTGTCTGAGCTCTCATTCCTCTCTCTCTaGAGGTCCACGGGGATGGTACAATCAGAAGGGGCTTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: QPVLKALSELSFLSL*RSTGMVQSEGASPP
Trigger: AGGAGGTGAAGCCCCTTCTGATTGTACCATCCCCGTGGACCTTCAGAGAGAGAGGAATGAGAGCTCAGACAAGGCCTTGAGCACTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TCTATCTCTCCGGCTTCCAGATCTGGAACAGGCTCTCTCCTGCTCTaGGAACACAGCTGGGGGCTGTGGATTCAGGACAGAGTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: SISPASRSGTGSLLL*EHSWGLWIQDRVWF
Trigger: AAACCAGACTCTGTCCTGAATCCACAGCCCCCAGCTGTGTTCCCAGAGCAGGAGAGAGCCTGTTCCAGATCTGGAAGCCGGAGAGATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TTATGCTGTTGTCTGCTTCCCAAAGGGCTCATTCCGTCCATGGCTTaGCTGACAGCTTTGGCTCCTGCTGCTGCTCTGCACAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LCCCLLPKGLIPSMA*LTALAPAAALHSSG
Trigger: TCCTGAGCTGTGCAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGAATGAGCCCTTTGGGAAGCAGACAACAGCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp ATCAGGGCAACTTGGCAAGGGTGTGTGAACTCAATGGAGATGGTGTaGGTCATGCCTGGTGTGAAGGGGGCCAGCCAGACATGCATGTCA +
Preference number: 5 (lower is better)
Translates to: IRATWQGCVNSMEMV*VMPGVKGASQTCMS
Trigger: TGACATGCATGTCTGGCTGGCCCCCTTCACACCAGGCATGACCCACACCATCTCCATTGAGTTCACACACCCTTGCCAAGTTGCCCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CCTGGGGCTGTGATTCAAGTCCCTTGTCCCTCCATGCTCTTCCAGCCCTTGGGGAGCTGCACAGGGTCCTaGGCTTTCAAATGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: PGAVIQVPCPSMLFQPLGSCTGS*AFKCFS
Trigger: ACTAAAGCATTTGAAAGCCAAGGACCCTGTGCAGCT...CCCCAAGGGCTGGAAGAGCATGGAGGGACAAGGGACTTGAATCACAGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCTCCAGTTCCTGGTCCTaGGGGACATCCTTCTGTACT +
Preference number: 5 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALSSSWS*GTSFCT
Trigger: AGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGA...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGCTGAGGAAGACCTGTaGCAGAGCTTCGTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTAEEDL*QSFVLH
Trigger: GTGGAGAACGAAGCTCTGCAACAGGTCTTCCTCAGC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp GCCCCACCCCCAGGAGAAGCTGGACTCCTGTTAGAGCAGAGGCCCTGGCTTCCTACTTTTCCTCTGAATTaGGTACTGGCTTCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: APPPGEAGLLLEQRPWLPTFPLN*VLASLL
Trigger: CAACAGAGAAGCCAGTACCAAATTCAGAGGAAAAGT...AGGAAGCCAGGGCCTCTGCTCTAACAGGAGTCCAGCTTCTCCTGGGGGTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CAA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCGAGACTTTCCAGCTGTaGGATCAAAGAGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALETFQL*DQRGLL
Trigger: GAGGAGCCCTCTTTGATCCAACAGCTGGAAAGTCTC...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTTGGATGCCAGAGGCCCTGCTCTTATAGACCTCACAGGGGAGGCACAGAGAGGCTGACTGTCTGTTTCTaGCCCATCCCTGCTAGAGAA +
Preference number: 5 (lower is better)
Translates to: LGCQRPCSYRPHRGGTERLTVCF*PIPARE
Trigger: TTCTCTAGCAGGGATGGGCAAGAAACAGACAGTCAG...CCTCTCTGTGCCTCCCCTGTGAGGTCTATAAGAGCAGGGCCTCTGGCATCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CTAGGACTCACCCCATCAGGCCTCCAAAGGCACTGGATAGAGGAGGAGCAGCTGGGGAAGGCAGCAATATaGTTCTGGGACAATGGGATC +
Preference number: 5 (lower is better)
Translates to: LGLTPSGLQRHWIEEEQLGKAAI*FWDNGI
Trigger: GATCCCATTGTCCCAGAACAATATTGCTGCCTTCCC...CAGCTGCTCCTCCTCTATCCAGTGCCTTTGGAGGCCTGATGGGGTGAGTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp ATAGACCTCACAGGGGAGGCACAGAGAGGAATCAGGTATCCCTGGCTCCCAGCAATGGCAAGGATGCCGTaGTACACAAGCAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: IDLTGEAQRGIRYPWLPAMARMP*YTSRSS
Trigger: GGATGACCTGCTTGTGTACAACGGCATCCTTGCCAT...TGCTGGGAGCCAGGGATACCTGATTCCTCTCTGTGCCTCCCCTGTGAGGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp GAGGGCACCTTTGCTTTCTTTCCAGCCAGTGCTCAAGGCCTTGTCTaGGCTCTCATTCCTCTCTCTCTGAAGGTCCACGGGGATGGTACA +
Preference number: 5 (lower is better)
Translates to: EGTFAFFPASAQGLV*ALIPLSLKVHGDGT
Trigger: TGTACCATCCCCGTGGACCTTCAGAGAGAGAGGAATGAGAGCTCAGACAAGGCCTTGAGCACTGGCTGGAAAGAAAGCAAAGGTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp ATGCCGGCCTTCCAGTTCCTGGTCCTTGGGGACATCCTTCTGTACTaGATCATGGCTGGGAAGTGGACATTCATCTCTGTTGTGGACTGG +
Preference number: 5 (lower is better)
Translates to: MPAFQFLVLGDILLY*IMAGKWTFISVVDW
Trigger: CCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp ATTTCTGGTGCCATCCTCGGCGCTGGACTTTTCCTGGTGCTGTCCTaGAGCTGCGTCTTAAGACTTCTTCGGCTTCTCGGAATAGGGTTC +
Preference number: 5 (lower is better)
Translates to: ISGAILGAGLFLVLS*SCVLRLLRLLGIGF
Trigger: GAACCCTATTCCGAGAAGCCGAAGAAGTCTTAAGACGCAGCTCCAGGACAGCACCAGGAAAAGTCCAGCGCCGAGGATGGCACCAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TACTGCATCATGGCTGGGAAGTGGACATTCATCTCTGTTGTGGACTaGCAGGACAGGGTCCTCAGTCTCCGTCTCAGAGAGGACGTCTTC +
Preference number: 5 (lower is better)
Translates to: YCIMAGKWTFISVVD*QDRVLSLRLREDVF
Trigger: GAAGACGTCCTCTCTGAGACGGAGACTGAGGACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp CTGGTCCTTGGGGACATCCTTCTGTACTGCATCATGGCTGGGAAGTaGACATTCATCTCTGTTGTGGACTGGCAGGACAGGGTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LVLGDILLYCIMAGK*TFISVVDWQDRVLS
Trigger: ACTGAGGACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp CCAGTTCCTGGTCCTTGGGGACATCCTTCTGTACTGCATCATGGCTaGGAAGTGGACATTCATCTCTGTTGTGGACTGGCAGGACAGGGT +
Preference number: 5 (lower is better)
Translates to: PVPGPWGHPSVLHHG*EVDIHLCCGLAGQG
Trigger: ACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TTCAGGGCCCTCCTCCCACTAGCAGGGCGATCCCTGTTAGGAAGCTaGCTAAAGATGTCTAAGTCATCGCCACAGGCTTTGGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: FRALLPLAGRSLLGS*LKMSKSSPQALENA
Trigger: AGCATTCTCCAAAGCCTGTGGCGATGACTTAGACATCTTTAGCCAGCTTCCTAACAGGGATCGCCCTGCTAGTGGGAGGAGGGCCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp CCCTCTAGCGCATTCACACTGTCTGGGAAGGCAGCAATATTGTTCTaGGACAATGGGATCCTCTCCCCATGCTCGTCATACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PSSAFTLSGKAAILF*DNGILSPCSSYSSS
Trigger: GCTGGAGCTGTATGACGAGCATGGGGAGAGGATCCCATTGTCCCAGAACAATATTGCTGCCTTCCCAGACAGTGTGAATGCGCTAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGAGCTGCACAGGGTCCTaGGCTTTCAAATGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAESCTGS*AFKCFS
Trigger: ACTAAAGCATTTGAAAGCCAAGGACCCTGTGCAGCT...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp GATGTACACACAGGTATGGGGCTCTGGACTGCAGGGCGAAGAGGTAGGGCTGAGATAGACAGAGAAACCTaGCTCCAAGTGTTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: DVHTGMGLWTAGRRGRAEIDRET*LQVFQP
Trigger: AGGCTGGAACACTTGGAGCAAGGTTTCTCTGTCTAT...CTCAGCCCTACCTCTTCGCCCTGCAGTCCAGAGCCCCATACCTGTGTGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AGCTGGCCAACCCTGAAGTGTGAAGGACATGGGTACTGTTCAGGGCTGGTGATAGCTGAGGAAGACCTGTaGCAGAGCTTCGTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SWPTLKCEGHGYCSGLVIAEEDL*QSFVLH
Trigger: GTGGAGAACGAAGCTCTGCAACAGGTCTTCCTCAGC...TATCACCAGCCCTGAACAGTACCCATGTCCTTCACACTTCAGGGTTGGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATTTGCTGGTGGTTCCTaGGTATCCTGCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTFAGGS*VSCCGL
Trigger: CAGTCCACAGCAGGATACCAAGGAACCACCAGCAAA...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCATCTTGAGGGCACCTTaGCTTTCTTTCCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALILRAP*LSFQPV
Trigger: CACTGGCTGGAAAGAAAGCAAAGGTGCCCTCAAGAT...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp TTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACATGCCCTTGACCCTAATCAGGGCAACTaGGCAAGGGTGTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: FSTHCSSLPLLSRTHALDPNQGN*ARVCEL
Trigger: GAGTTCACACACCCTTGCCAAGTTGCCCTGATTAGG...GTCAAGGGCATGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp CATGGGTACTGTTCAGGGCTGGTGATAGAGCCTAGCCAGCTCGAAGAGGCTCTCACTTGGTCGATAAGCTaGTCAGGGGTTCTCACATCC +
Preference number: 5 (lower is better)
Translates to: HGYCSGLVIEPSQLEEALTWSIS*SGVLTS
Trigger: GGATGTGAGAACCCCTGACAAGCTTATCGACCAAGT...GAGAGCCTCTTCGAGCTGGCTAGGCTCTATCACCAGCCCTGAACAGTACCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAGCTGGTGTCGTTGACTaGGTCGATAAGCTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTAGVVD*VDKLVR
Trigger: CCTGACAAGCTTATCGACCAAGTCAACGACACCAGC...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp GCACAGCTTTCCGTGGTGATGTCTTCAGCTCCGAGTTGGCCCCATTaGCATAGACAGAGAAACCTTGCTCCAAGTGTTCCAGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: AQLSVVMSSAPSWPH*HRQRNLAPSVPASA
Trigger: AGCTGAGGCTGGAACACTTGGAGCAAGGTTTCTCTGTCTATGTCAATGGGGCCAACTCGGAGCTGAAGACATCACCACGGAAAGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000148701.4
CDS GCA 90 bp TTCAGCAGACTGGACCAGGATTTTGCTGGTGGTTCCTTGGTATCCTaGTGTGGACTGGTATGTAGCTCAGGATCGTGGCTGAGGAAGACC +
Preference number: 5 (lower is better)
Translates to: FSRLDQDFAGGSLVS*CGLVCSSGSWLRKT
Trigger: GGTCTTCCTCAGCCACGATCCTGAGCTACATACCAGTCCACAGCAGGATACCAAGGAACCACCAGCAAAATCCTGGTCCAGTCTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp ATCAAAGTGACAGTTGCCAGGCCCCTTTCGGATGAGAAAGCCTTCTaGAGGAGACACGCACAGGCCATCCAGGGACACATGAGCGATTTT +
Preference number: 5 (lower is better)
Translates to: IKVTVARPLSDEKAF*RRHAQAIQGHMSDF
Trigger: AAAATCGCTCATGTGTCCCTGGATGGCCTGTGCGTGTCTCCTGCAGAAGGCTTTCTCATCCGAAAGGGGCCTGGCAACTGTCACTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CCA 90 bp CCTTCCAGTTCCTGGTCCTTGGGGACATCCTTCTGTACTGCATCATaGCTGGGAAGTGGACATTCATCTCTGTTGTGGACTGGCAGGACA +
Preference number: 5 (lower is better)
Translates to: PSSSWSLGTSFCTAS*LGSGHSSLLWTGRT
Trigger: TGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp CCTTGTCTGAGCTCTCATTCCTCTCTCTCTGAAGGTCCACGGGGATaGTACAATCAGAAGGGGCTTCACCTCCTCCTTTCTCTAACACGC +
Preference number: 5 (lower is better)
Translates to: PCLSSHSSLSEGPRG*YNQKGLHLLLSLTR
Trigger: GCGTGTTAGAGAAAGGAGGAGGTGAAGCCCCTTCTGATTGTACCATCCCCGTGGACCTTCAGAGAGAGAGGAATGAGAGCTCAGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp TTTCTTGTGCAAAATCAAAGTGACAGTTGCCAGGCCCCTTTCGGATaGGAAAGCCTTCTGCAGGAGACACGCACAGGCCATCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: FLVQNQSDSCQAPFG*ESLLQETRTGHPGT
Trigger: TGTCCCTGGATGGCCTGTGCGTGTCTCCTGCAGAAGGCTTTCTCATCCGAAAGGGGCCTGGCAACTGTCACTTTGATTTTGCACAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CCA 90 bp CCGGTCGGTTCGGGGATTTTCCTACCTCTGAGACTTTCCAGCTGTTaGATCAAAGAGGGCTCCTCTTCTAGAGGAAGACATTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PVGSGIFLPLRLSSC*IKEGSSSRGRHFPG
Trigger: TCCTGGGAAATGTCTTCCTCTAGAAGAGGAGCCCTCTTTGATCCAACAGCTGGAAAGTCTCAGAGGTAGGAAAATCCCCGAACCGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCACTCACTAAGTCCCTGTaGACAAGGCACCCCAGTTCG +
Preference number: 5 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPLTKSL*TRHPSS
Trigger: CGAACTGGGGTGCCTTGTCAACAGGGACTTAGTGAG...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS CCA 90 bp TTCTTCGTCCATAATCCTGTGACCCCTCAGCCTGTGAGGCACTTCTaGAGAAGTCTGTATGCACAGCTTTCCGTGGTGATGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: FFVHNPVTPQPVRHF*RSLYAQLSVVMSSA
Trigger: AGCTGAAGACATCACCACGGAAAGCTGTGCATACAGACTTCTCCAGAAGTGCCTCACAGGCTGAGGGGTCACAGGATTATGGACGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000148701.4
CDS CCA 90 bp CCTGGTCTCCACCTCTCCAGGAGTATCACCCATGACATCCTCAGATaGAAACCTGCTCTTCTGTTCCAGATCTTTTTCAGGACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: PGLHLSRSITHDILR*KPALLFQIFFRTEP
Trigger: TGGCTCAGTCCTGAAAAAGATCTGGAACAGAAGAGCAGGTTTCCATCTGAGGATGTCATGGGTGATACTCCTGGAGAGGTGGAGACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCAGCTTTGGAGAATGCTTaGGGGGCTCTCTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPALENA*GALSSV
Trigger: CACTGAAGAGAGAGCCCCCAAAGCATTCTCCAAAGC...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS-3UTR CAA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCACCTAATCAGGGCAACTaGGCAAGGGTGTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPPNQGN*ARVCEL
Trigger: GAGTTCACACACCCTTGCCAAGTTGCCCTGATTAGG...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS TCA 90 bp GAGGGCCTTTTTCCCTGGTCTCCACCTCTCCAGGAGTATCACCCATaGCATCCTCAGATGGAAACCTGCTCTTCTGTTCCAGATCTTTTT +
Preference number: 5 (lower is better)
Translates to: EGLFPWSPPLQEYHP*HPQMETCSSVPDLF
Trigger: AAAAAGATCTGGAACAGAAGAGCAGGTTTCCATCTGAGGATGTCATGGGTGATACTCCTGGAGAGGTGGAGACCAGGGAAAAAGGCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp TGGGTAGTGTCACTTTCCATAGTCTGCAAGACTCCCACAAGTTTATaGTGTTGTCTGCTTCCCAAAGGGCTCATTCCGTCCATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: WVVSLSIVCKTPTSL*CCLLPKGLIPSMAW
Trigger: CCAAGCCATGGACGGAATGAGCCCTTTGGGAAGCAGACAACAGCATAAACTTGTGGGAGTCTTGCAGACTATGGAAAGTGACACTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp GGTATAGCCACCTGGCTGAGATGGGTAGTGTCACTTTCCATAGTCTaGAAGACTCCCACAAGTTTATGCTGTTGTCTGCTTCCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: GIATWLRWVVSLSIV*KTPTSLCCCLLPKG
Trigger: CCCTTTGGGAAGCAGACAACAGCATAAACTTGTGGGAGTCTTGCAGACTATGGAAAGTGACACTACCCATCTCAGCCAGGTGGCTATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 90 bp TCCAGGATGTCCTCATCCATGGTGAAGAGAATAGTGTCTCCAAAGTaGTCAGGGGCTCCCATCAGAGTTCCTGAGGCTTTGGCAATTTCT +
Preference number: 5 (lower is better)
Translates to: SRMSSSMVKRIVSPK*SGAPIRVPEALAIS
Trigger: AGAAATTGCCAAAGCCTCAGGAACTCTGATGGGAGCCCCTGAGCACTTTGGAGACACTATTCTCTTCACCATGGATGAGGACATCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TGTCTCCAAAGTGCTCAGGGGCTCCCATCAGAGTTCCTGAGGCTTTaGCAATTTCTCCTTCAAAGATGCACTGAGTATCCAACAGCATCG +
Preference number: 5 (lower is better)
Translates to: CLQSAQGLPSEFLRL*QFLLQRCTEYPTAS
Trigger: CGATGCTGTTGGATACTCAGTGCATCTTTGAAGGAGAAATTGCCAAAGCCTCAGGAACTCTGATGGGAGCCCCTGAGCACTTTGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AAGGGCAGGTTTCAGCACTCACTGCAGCTCACTTCCTCTCCTCAGCAGGACACAACTTTTCCTCTGAATTaGGTACTGGCTTCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: KGRFQHSLQLTSSPQQDTTFPLN*VLASLL
Trigger: CAACAGAGAAGCCAGTACCAAATTCAGAGGAAAAGT...TGTGTCCTGCTGAGGAGAGGAAGTGAGCTGCAGTGAGTGCTGAAACCTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp AAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTCCACTGACTGTCTGTTTCTaGCCCATCCCTGCTAGAGAA +
Preference number: 5 (lower is better)
Translates to: KHRPSIWRSTSRSVLGAPLTVCF*PIPARE
Trigger: TTCTCTAGCAGGGATGGGCAAGAAACAGACAGTCAG...TGGAGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS TCA 90 bp CACCAATGTCAAGATCCCCATCTGCTGTCCAGTAATTCCGAACCTTaGTCATGGTCAGACCGAAGTCACGAAGCTGTCGCATGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: HQCQDPHLLSSNSEP*SWSDRSHEAVACCE
Trigger: TTCACAACATGCGACAGCTTCGTGACTTCGGTCTGACCATGATCAAGGTTCGGAATTACTGGACAGCAGATGGGGATCTTGACATTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TGTAGACTTGATGTCAATAACCAAGTGCTGTCCATAAGGGAGGACTaGGATTTTAAAGTCGCTGTCACCACCCATCTCTGTGGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: CRLDVNNQVLSIRED*DFKVAVTTHLCGGL
Trigger: GAGCCCTCCACAGAGATGGGTGGTGACAGCGACTTTAAAATCCCAGTCCTCCCTTATGGACAGCACTTGGTTATTGACATCAAGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS-3UTR CAA 90 bp TATAAACACCGACCAAGTATTTGGAGGAGCACATCAAGGTCAGTCTTGGGTGCTGAGACTTTCCAGCTGTaGGATCAAAGAGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: YKHRPSIWRSTSRSVLGAETFQL*DQRGLL
Trigger: GAGGAGCCCTCTTTGATCCAACAGCTGGAAAGTCTC...AGCACCCAAGACTGACCTTGATGTGCTCCTCCAAATACTTGGTCGGTGTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069660.13
CDS TCA 90 bp ATCAGAGTTCCTGAGGCTTTGGCAATTTCTCCTTCAAAGATGCACTaGGTATCCAACAGCATCGTGATGTCCTTCACACCTCGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: IRVPEALAISPSKMH*VSNSIVMSFTPRKE
Trigger: CTCCTTCCGAGGTGTGAAGGACATCACGATGCTGTTGGATACTCAGTGCATCTTTGAAGGAGAAATTGCCAAAGCCTCAGGAACTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp CACTCCTCGTTGAGGCGTTTTCGTGTAATTCCACAGTTTGATCATTaGCACAGTGGTGGGCAGGTCGAAAATGACATACACTCGGTTCAC +
Preference number: 5 (lower is better)
Translates to: HSSLRRFRVIPQFDH*HSGGQVENDIHSVH
Trigger: GTGAACCGAGTGTATGTCATTTTCGACCTGCCCACCACTGTGTCAATGATCAAACTGTGGAATTACACGAAAACGCCTCAACGAGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CCA 90 bp AGAAACCTTGCTCCAAGTGTTCCAGCCTCAGCTGCACAGGGTCCTTaGCTTTCAAATGCTTTAGTATCCGGTTTCTCTGCTGAAGCAATA +
Preference number: 5 (lower is better)
Translates to: RNLAPSVPASAAQGP*LSNALVSGFSAEAI
Trigger: TATTGCTTCAGCAGAGAAACCGGATACTAAAGCATTTGAAAGCCAAGGACCCTGTGCAGCTGAGGCTGGAACACTTGGAGCAAGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000148701.4
CDS TCA 90 bp CAGTTCGCCTGGCAACACTGCATTCCGGATGTCCACATCATGAGGTaGGACATAAAGCTTTATGTTGTTCAGATCAAAGAACTGGACTTC +
Preference number: 5 (lower is better)
Translates to: QFAWQHCIPDVHIMR*DIKLYVVQIKELDF
Trigger: GAAGTCCAGTTCTTTGATCTGAACAACATAAAGCTTTATGTCTCACCTCATGATGTGGACATCCGGAATGCAGTGTTGCCAGGCGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp TGGCAATTTCTCCTTCAAAGATGCACTGAGTATCCAACAGCATCGTaGTGTCCTTCACACCTCGGAAGGAGTGGATTCGAGACTTATTGT +
Preference number: 5 (lower is better)
Translates to: WQFLLQRCTEYPTAS*CPSHLGRSGFETYC
Trigger: ACAATAAGTCTCGAATCCACTCCTTCCGAGGTGTGAAGGACATCACGATGCTGTTGGATACTCAGTGCATCTTTGAAGGAGAAATTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 90 bp TCTTGTGATTCAAAATCTTCTGAACAGTCCAGAGGAGGTTCAATGTaGAGACGAGAGCCAGCTTCAGTTCTGATCTGCACAGATTTCTGG +
Preference number: 5 (lower is better)
Translates to: SCDSKSSEQSRGGSM*RREPASVLICTDFW
Trigger: CCAGAAATCTGTGCAGATCAGAACTGAAGCTGGCTCTCGTCTCCACATTGAACCTCCTCTGGACTGTTCAGAAGATTTTGAATCACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 90 bp TATGTTGTTCAGATCAAAGAACTGGACTTCTGTGAGACCCACCCATaGTGCATTGCCCCAGTTAGACAGGATTTCCATAGTCACATAGAT +
Preference number: 5 (lower is better)
Translates to: YVVQIKELDFCETHP*CIAPVRQDFHSHID
Trigger: ATCTATGTGACTATGGAAATCCTGTCTAACTGGGGCAATGCATCATGGGTGGGTCTCACAGAAGTCCAGTTCTTTGATCTGAACAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp CGCTGGAGCCGTCCTCTTGGGTCTGGAGGCTTGTGCTaGGCCCCAGGCCTTTTCTCAGCTCCTGTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: RWSRPLGSGGLC*APGLFSAPVCA
Trigger: AGCACACACAGGAGCTGAGAAAAGGCCTGGGGCTCAGCACAAGCCTCCAGACCCAAGAGGACGGCTCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp CCGGTGGGCACGGTCGAAGGCAGTGAGGGAGTCCCATaGTGCATGCAGTGCGTGTTCCTGCTCACCATACCA +
Preference number: 6 (lower is better)
Translates to: PVGTVEGSEGVP*CMQCVFLLTIP
Trigger: TGGTATGGTGAGCAGGAACACGCACTGCATGCATCATGGGACTCCCTCACTGCCTTCGACCGTGCCCACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp CAGAGATTCTGCCCCGGTGGGCACGGTCGAAGGCAGTaGGGGAGTCCCATGATGCATGCAGTGCGTGTTCCT +
Preference number: 6 (lower is better)
Translates to: QRFCPGGHGRRQ*GSPMMHAVRVP
Trigger: AGGAACACGCACTGCATGCATCATGGGACTCCCTCACTGCCTTCGACCGTGCCCACCGGGGCAGAATCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp CTGGTACCTGGTCCTGGGCACCCAAGCCAGCCTGTGTaGAAGGCCTTTCATCCTGACCTTCACCGTCGGCAG +
Preference number: 6 (lower is better)
Translates to: LVPGPGHPSQPV*KAFHPDLHRRQ
Trigger: CTGCCGACGGTGAAGGTCAGGATGAAAGGCCTTTCACACAGGCTGGCTTGGGTGCCCAGGACCAGGTACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp TCCTCTCCCCATGCTCGTCATACAGCTCCAGCCCTGTaGGGCCGATGTAGTAGGGATCGCCCCAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: SSPHARHTAPAL*GRCSRDRPSWT
Trigger: TGTCCAGCTGGGGCGATCCCTACTACATCGGCCTCACAGGGCTGGAGCTGTATGACGAGCATGGGGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp TCCGTCCATGGCTTGGCTGACAGCTTTGGCTCCTGCTaGTGCTCTGCACAGCTCAGGATCGGTGGTCACTGG +
Preference number: 6 (lower is better)
Translates to: SVHGLADSFGSC*CSAQLRIGGHW
Trigger: CCAGTGACCACCGATCCTGAGCTGTGCAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp ACCAAGGCAGTGTCTGGGAGGCCTGGGTGTCTTCTTTaGTGGCTGGCCGGTCATCACCATGGCTACTGCTGG +
Preference number: 6 (lower is better)
Translates to: TKAVSGRPGCLL*WLAGHHHGYCW
Trigger: CCAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp GGATGCCCCCAACCAGGTGGCTCACCATGGCAAGGATaGCGTTGTACACAAGCAGGTCATCCACCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: GCPQPGGSPWQG*RCTQAGHPPAG
Trigger: GCCTGCTGGTGGATGACCTGCTTGTGTACAACGGCATCCTTGCCATGGTGAGCCACCTGGTTGGGGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TCCTGCTCACCATACCACTGCAACCAAGGCAGTGTCTaGGAGGCCTGGGTGTCTTCTTTGCTGGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: SCSPYHCNQGSV*EAWVSSLLAGR
Trigger: CCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTTGCAGTGGTATGGTGAGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TGTGGAGGGCTCTGGCTCCTCCTCTCTGCAAGGGGCTaGGAATTCCTCATGCCGGCTGCTCCTTTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: CGGLWLLLSARG*EFLMPAAPLLL
Trigger: AAGCAGCAAAGGAGCAGCCGGCATGAGGAATTCCCAGCCCCTTGCAGAGAGGAGGAGCCAGAGCCCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TGGCTCGCTCCAGGCTCTTTGCATCTAGTCTCCTGGTaGGTGCTGGTGGTAGCCGGGTCTGTAGGTAGTCCC +
Preference number: 6 (lower is better)
Translates to: WLAPGSLHLVSW*VLVVAGSVGSP
Trigger: GGGACTACCTACAGACCCGGCTACCACCAGCACCCACCAGGAGACTAGATGCAAAGAGCCTGGAGCGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CCA 72 bp GTAGGCTCACACGTGGGCAGGATGCCCCCAACCAGGTaGCTCACCATGGCAAGGATGCCGTTGTACACAAGC +
Preference number: 6 (lower is better)
Translates to: VGSHVGRMPPTR*LTMARMPLYTS
Trigger: GCTTGTGTACAACGGCATCCTTGCCATGGTGAGCCACCTGGTTGGGGGCATCCTGCCCACGTGTGAGCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp GTGGCCTGGGGATGCCGGCCTTCCAGTTCCTGGTCCTaGGGGACATCCTTCTGTACTGCATCATGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: VAWGCRPSSSWS*GTSFCTASWLG
Trigger: TCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCGGCATCCCCAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp CACTGTCTGGGAAGGCAGCAATATAGCCACAGGGCATaGGTGGGGCCTCGTAGTCCATGCTGGCTCGCTCCA +
Preference number: 6 (lower is better)
Translates to: HCLGRQQYSHRA*VGPRSPCWLAP
Trigger: TGGAGCGAGCCAGCATGGACTACGAGGCCCCACTCATGCCCTGTGGCTATATTGCTGCCTTCCCAGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132204.3
CDS CCA 72 bp TGGCCTGGGGATGCCGGCCTTCCAGTTCCTGGTCCTTaGGGACATCCTTCTGTACTGCATCATGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: WPGDAGLPVPGP*GHPSVLHHGWE
Trigger: TTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCGGCATCCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GTGTCTGTGGCCTGGGGATGCCGGCCTTCCAGTTCCTaGTCCTTGGGGACATCCTTCTGTACTGCATCATGG +
Preference number: 6 (lower is better)
Translates to: VSVAWGCRPSSS*SLGTSFCTASW
Trigger: CCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCGGCATCCCCAGGCCACAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GGGTTAAACTCCATTACCACAAGGGTGTCTGTGGCCTaGGGATGCCGGCCTTCCAGTTCCTGGTCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: GLNSITTRVSVA*GCRPSSSWSLG
Trigger: CCCCAAGGACCAGGAACTGGAAGGCCGGCATCCCCAGGCCACAGACACCCTTGTGGTAATGGAGTTTAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp CCGGCTTCCAGATCTGGAACAGGCTCTCTCCTGCTCTaGGAACACAGCTGGGGGCTGTGGATTCAGGACAGA +
Preference number: 6 (lower is better)
Translates to: PASRSGTGSLLL*EHSWGLWIQDR
Trigger: TCTGTCCTGAATCCACAGCCCCCAGCTGTGTTCCCAGAGCAGGAGAGAGCCTGTTCCAGATCTGGAAGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp CAGTGTCTGGGAGGCCTGGGTGTCTTCTTTGCTGGCTaGCCGGTCATCACCATGGCTACTGCTGGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: QCLGGLGVFFAG*PVITMATAGFL
Trigger: AAGGAAGCCAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp AAGGCAGTGTCTGGGAGGCCTGGGTGTCTTCTTTGCTaGCTGGCCGGTCATCACCATGGCTACTGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: KAVSGRPGCLLC*LAGHHHGYCWL
Trigger: AAGCCAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp AAGGCCTTTCATCCTGACCTTCACCGTCGGCAGTGCTaGGCCTCCTTAGCGCTTCTTCAGGCTGAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: KAFHPDLHRRQC*ASLALLQAEGH
Trigger: GTGGCCTTCAGCCTGAAGAAGCGCTAAGGAGGCCCAGCACTGCCGACGGTGAAGGTCAGGATGAAAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TGCTGGCTCGCTCCAGGCTCTTTGCATCTAGTCTCCTaGTGGGTGCTGGTGGTAGCCGGGTCTGTAGGTAGT +
Preference number: 6 (lower is better)
Translates to: CWLAPGSLHLVS*WVLVVAGSVGS
Trigger: ACTACCTACAGACCCGGCTACCACCAGCACCCACCAGGAGACTAGATGCAAAGAGCCTGGAGCGAGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CCA 72 bp CAGAAGTCAGTGTCCTCAGCAAAAAGGATGGTGTGGTaGGGCACGGTAGGCTCACACGTGGGCAGGATGCCC +
Preference number: 6 (lower is better)
Translates to: QKSVSSAKRMVW*GTVGSHVGRMP
Trigger: GGGCATCCTGCCCACGTGTGAGCCTACCGTGCCCCACCACACCATCCTTTTTGCTGAGGACACTGACTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp AACCAAGGCAGTGTCTGGGAGGCCTGGGTGTCTTCTTaGCTGGCTGGCCGGTCATCACCATGGCTACTGCTG +
Preference number: 6 (lower is better)
Translates to: NQGSVWEAWVSS*LAGRSSPWLLL
Trigger: CAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp CCCCCAACCAGGTGGCTCACCATGGCAAGGATGCCGTaGTACACAAGCAGGTCATCCACCAGCAGGCCAAAC +
Preference number: 6 (lower is better)
Translates to: PPTRWLTMARMP*YTSRSSTSRPN
Trigger: GTTTGGCCTGCTGGTGGATGACCTGCTTGTGTACAACGGCATCCTTGCCATGGTGAGCCACCTGGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp GACGTCTTCCTCAATAGAGTCGTACTCGTCGCTGGAGCCGTCCTCTaGGGTCTGGAGGCTTGTGCTGAGCCCCAGGCCTTTTCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: DVFLNRVVLVAGAVL*GLEACAEPQAFSQL
Trigger: GAGCTGAGAAAAGGCCTGGGGCTCAGCACAAGCCTCCAGACCCAAGAGGACGGCTCCAGCGACGAGTACGACTCTATTGAGGAAGACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp AGGGTGTCTGTGGCCTGGGGATGCCGGCCTTCCAGTTCCTGGTCCTaGGGGACATCCTTCTGTACTGCATCATGGCTGGGAAGTGGACAT +
Preference number: 6 (lower is better)
Translates to: RVSVAWGCRPSSSWS*GTSFCTASWLGSGH
Trigger: ATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCGGCATCCCCAGGCCACAGACACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp CTGCTTCCCAAAGGGCTCATTCCGTCCATGGCTTGGCTGACAGCTTaGGCTCCTGCTGCTGCTCTGCACAGCTCAGGATCGGTGGTCACT +
Preference number: 6 (lower is better)
Translates to: LLPKGLIPSMAWLTA*APAAALHSSGSVVT
Trigger: AGTGACCACCGATCCTGAGCTGTGCAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGAATGAGCCCTTTGGGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp GGGGGCTCTCTCTTCAGTGATGACATTCCAGCTGCTAGTCCTCCCTaGCTCACGACGAGGGCCTTTTTCCCTGGTCTCCACCTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GGSLFSDDIPAASPP*LTTRAFFPGLHLSR
Trigger: CCTGGAGAGGTGGAGACCAGGGAAAAAGGCCCTCGTCGTGAGCAAGGGAGGACTAGCAGCTGGAATGTCATCACTGAAGAGAGAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp TACCACTGCAACCAAGGCAGTGTCTGGGAGGCCTGGGTGTCTTCTTaGCTGGCTGGCCGGTCATCACCATGGCTACTGCTGGCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: YHCNQGSVWEAWVSS*LAGRSSPWLLLASF
Trigger: GAAGGAAGCCAGCAGTAGCCATGGTGATGACCGGCCAGCCAGCAAAGAAGACACCCAGGCCTCCCAGACACTGCCTTGGTTGCAGTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp GGCAGGATGCCCCCAACCAGGTGGCTCACCATGGCAAGGATGCCGTaGTACACAAGCAGGTCATCCACCAGCAGGCCAAACTCCTTCACT +
Preference number: 6 (lower is better)
Translates to: GRMPPTRWLTMARMP*YTSRSSTSRPNSFT
Trigger: AGTGAAGGAGTTTGGCCTGCTGGTGGATGACCTGCTTGTGTACAACGGCATCCTTGCCATGGTGAGCCACCTGGTTGGGGGCATCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp GATGCATGCAGTGCGTGTTCCTGCTCACCATACCACTaGAACCAAGGCAGTGTCTGGGAGGCCTGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: DACSACSCSPYH*NQGSVWEAWVS
Trigger: AGACACCCAGGCCTCCCAGACACTGCCTTGGTTGCAGTGGTATGGTGAGCAGGAACACGCACTGCATGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp TGGGTCATGCCTGGTGTGAAGGGGGCCAGCCAGACATaGATGTCATCCTGGGTCCTGTTCACCCCATCAATG +
Preference number: 6 (lower is better)
Translates to: WVMPGVKGASQT*MSSWVLFTPSM
Trigger: CATTGATGGGGTGAACAGGACCCAGGATGACATGCATGTCTGGCTGGCCCCCTTCACACCAGGCATGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp ACAGTTGCCAGGCCCCTTTCGGATGAGAAAGCCTTCTaGAGGAGACACGCACAGGCCATCCAGGGACACATG +
Preference number: 6 (lower is better)
Translates to: TVARPLSDEKAF*RRHAQAIQGHM
Trigger: CATGTGTCCCTGGATGGCCTGTGCGTGTCTCCTGCAGAAGGCTTTCTCATCCGAAAGGGGCCTGGCAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CCA 72 bp GCCATCCTCGGCGCTGGACTTTTCCTGGTGCTGTCCTaGAGCTGCGTCTTAAGACTTCTTCGGCTTCTCGGA +
Preference number: 6 (lower is better)
Translates to: AILGAGLFLVLS*SCVLRLLRLLG
Trigger: TCCGAGAAGCCGAAGAAGTCTTAAGACGCAGCTCCAGGACAGCACCAGGAAAAGTCCAGCGCCGAGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TCAATAGAGTCGTACTCGTCGCTGGAGCCGTCCTCTTaGGTCTGGAGGCTTGTGCTGAGCCCCAGGCCTTTT +
Preference number: 6 (lower is better)
Translates to: SIESYSSLEPSS*VWRLVLSPRPF
Trigger: AAAAGGCCTGGGGCTCAGCACAAGCCTCCAGACCCAAGAGGACGGCTCCAGCGACGAGTACGACTCTATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GGCTCTCTCCTGCTCTGGGAACACAGCTGGGGGCTGTaGATTCAGGACAGAGTCTGGTTTGCTGGGGATGAA +
Preference number: 6 (lower is better)
Translates to: GSLLLWEHSWGL*IQDRVWFAGDE
Trigger: TTCATCCCCAGCAAACCAGACTCTGTCCTGAATCCACAGCCCCCAGCTGTGTTCCCAGAGCAGGAGAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TGCTGCTGCTCTGCACAGCTCAGGATCGGTGGTCACTaGAGTAGCAGGAAGCAGCTCAGGGATGTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: CCCSAQLRIGGH*SSRKQLRDVLL
Trigger: AAGGAGGACATCCCTGAGCTGCTTCCTGCTACTCCAGTGACCACCGATCCTGAGCTGTGCAGAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TGTCTGCTTCCCAAAGGGCTCATTCCGTCCATGGCTTaGCTGACAGCTTTGGCTCCTGCTGCTGCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: CLLPKGLIPSMA*LTALAPAAALH
Trigger: GTGCAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGAATGAGCCCTTTGGGAAGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp AGTCCCTGGGAGAGGCAGAGAGCTGGTGTGGTTGAATaGGCAAGGCCTCGCCGTCCTTGCCTACTACTTCTA +
Preference number: 6 (lower is better)
Translates to: SPWERQRAGVVE*ARPRRPCLLLL
Trigger: TAGAAGTAGTAGGCAAGGACGGCGAGGCCTTGCCCATTCAACCACACCAGCTCTCTGCCTCTCCCAGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp CCGAGGCATCTTCCTCTCGGTCCTCAGCTGCATATGCTTTGCGGGTaGCTGACAAGGGTCTATCTCTCCGGCTTCCAGATCTGGAACAGG +
Preference number: 6 (lower is better)
Translates to: PRHLPLGPQLHMLCG*LTRVYLSGFQIWNR
Trigger: CCTGTTCCAGATCTGGAAGCCGGAGAGATAGACCCTTGTCAGCAACCCGCAAAGCATATGCAGCTGAGGACCGAGAGGAAGATGCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp AGCACAGCCGAGGCATCTTCCTCTCGGTCCTCAGCTGCATATGCTTaGCGGGTTGCTGACAAGGGTCTATCTCTCCGGCTTCCAGATCTG +
Preference number: 6 (lower is better)
Translates to: STAEASSSRSSAAYA*RVADKGLSLRLPDL
Trigger: CAGATCTGGAAGCCGGAGAGATAGACCCTTGTCAGCAACCCGCAAAGCATATGCAGCTGAGGACCGAGAGGAAGATGCCTCGGCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp TCGGTGGTCACTGGAGTAGCAGGAAGCAGCTCAGGGATGTCCTCCTaGGCCTTCAGCAGACTGGACCAGGATTTTGCTGGTGGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: SVVTGVAGSSSGMSS*AFSRLDQDFAGGSL
Trigger: CAAGGAACCACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCAAGGAGGACATCCCTGAGCTGCTTCCTGCTACTCCAGTGACCACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp TTTAAGTCCCTGGGAGAGGCAGAGAGCTGGTGTGGTTaGATGGGCAAGGCCTCGCCGTCCTTGCCTACTACT +
Preference number: 6 (lower is better)
Translates to: FKSLGEAESWCG*MGKASPSLPTT
Trigger: AGTAGTAGGCAAGGACGGCGAGGCCTTGCCCATTCAACCACACCAGCTCTCTGCCTCTCCCAGGGACTTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp CTCGGCGCTGGACTTTTCCTGGTGCTGTCCTGGAGCTaGGTCTTAAGACTTCTTCGGCTTCTCGGAATAGGG +
Preference number: 6 (lower is better)
Translates to: LGAGLFLVLSWS*VLRLLRLLGIG
Trigger: CCCTATTCCGAGAAGCCGAAGAAGTCTTAAGACGCAGCTCCAGGACAGCACCAGGAAAAGTCCAGCGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp GTGAGGGAGTCCCATGATGCATGCAGTGCGTGTTCCTaGTCACCATACCACTGCAACCAAGGCAGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: VRESHDACSACS*SPYHCNQGSVW
Trigger: CCAGACACTGCCTTGGTTGCAGTGGTATGGTGAGCAGGAACACGCACTGCATGCATCATGGGACTCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp CTGATCTGCACAGATTTCTGGTGCCATCCTCGGCGCTaGACTTTTCCTGGTGCTGTCCTGGAGCTGCGTCTT +
Preference number: 6 (lower is better)
Translates to: LICTDFWCHPRR*TFPGAVLELRL
Trigger: AAGACGCAGCTCCAGGACAGCACCAGGAAAAGTCCAGCGCCGAGGATGGCACCAGAAATCTGTGCAGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp ACAGCTGGGGGCTGTGGATTCAGGACAGAGTCTGGTTaGCTGGGGATGAAGACCTCAGCATTCTCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: TAGGCGFRTESG*LGMKTSAFSFR
Trigger: GCGGAAGGAGAATGCTGAGGTCTTCATCCCCAGCAAACCAGACTCTGTCCTGAATCCACAGCCCCCAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp TTGTCTGCTTCCCAAAGGGCTCATTCCGTCCATGGCTaGGCTGACAGCTTTGGCTCCTGCTGCTGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: LSASQRAHSVHG*ADSFGSCCCSA
Trigger: TGCAGAGCAGCAGCAGGAGCCAAAGCTGTCAGCCAAGCCATGGACGGAATGAGCCCTTTGGGAAGCAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp GGGGCCAACCACATGTGCCTGCCATCGCTGGTGTCGTaGACTTGGTCGATAAGCTTGTCAGGGGTTCTCACA +
Preference number: 6 (lower is better)
Translates to: GANHMCLPSLVS*TWSISLSGVLT
Trigger: TGTGAGAACCCCTGACAAGCTTATCGACCAAGTCAACGACACCAGCGATGGCAGGCACATGTGGTTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CAA 90 bp CACATGTGCCTGCCATCGCTGGTGTCGTTGACTTGGTCGATAAGCTaGTCAGGGGTTCTCACATCCCCGCAAACACCCTCTAGCGCATTC +
Preference number: 6 (lower is better)
Translates to: HMCLPSLVSLTWSIS*SGVLTSPQTPSSAF
Trigger: GAATGCGCTAGAGGGTGTTTGCGGGGATGTGAGAACCCCTGACAAGCTTATCGACCAAGTCAACGACACCAGCGATGGCAGGCACATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS GCA 72 bp CCCTCAGCCTGTGAGGCACTTCTGGAGAAGTCTGTATaGACAGCTTTCCGTGGTGATGTCTTCAGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: PSACEALLEKSV*TAFRGDVFSSE
Trigger: CTCGGAGCTGAAGACATCACCACGGAAAGCTGTGCATACAGACTTCTCCAGAAGTGCCTCACAGGCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000148701.4
CDS GCA 72 bp AGGCATCTTCCTCTCGGTCCTCAGCTGCATATGCTTTaGGGGTTGCTGACAAGGGTCTATCTCTCCGGCTTC +
Preference number: 6 (lower is better)
Translates to: RHLPLGPQLHML*GLLTRVYLSGF
Trigger: GAAGCCGGAGAGATAGACCCTTGTCAGCAACCCGCAAAGCATATGCAGCTGAGGACCGAGAGGAAGATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp GTCCTCCTTGGCCTTCAGCAGACTGGACCAGGATTTTaGTGGTGGTTCCTTGGTATCCTGCTGTGGACTGGT +
Preference number: 6 (lower is better)
Translates to: VLLGLQQTGPGF*WWFLGILLWTG
Trigger: ACCAGTCCACAGCAGGATACCAAGGAACCACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCAAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp CCTCTCTGCAAGGGGCTGGGAATTCCTCATGCCGGCTaGTCCTTTGCTGCTTCAGGAACTCATCTAGGATGT +
Preference number: 6 (lower is better)
Translates to: PLCKGLGIPHAG*SFAASGTHLGC
Trigger: ACATCCTAGATGAGTTCCTGAAGCAGCAAAGGAGCAGCCGGCATGAGGAATTCCCAGCCCCTTGCAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp ATGGCTGGGAAGTGGACATTCATCTCTGTTGTGGACTaGCAGGACAGGGTCCTCAGTCTCCGTCTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: MAGKWTFISVVD*QDRVLSLRLRE
Trigger: CTCTCTGAGACGGAGACTGAGGACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GCATCATGGCTGGGAAGTGGACATTCATCTCTGTTGTaGACTGGCAGGACAGGGTCCTCAGTCTCCGTCTCA +
Preference number: 6 (lower is better)
Translates to: ASWLGSGHSSLL*TGRTGSSVSVS
Trigger: TGAGACGGAGACTGAGGACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp CTGAGGAAGACCTGTTGCAGAGCTTCGTTCTCCACCTaGATGGCTTTCAGCACAGCCGAGGCATCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: LRKTCCRASFST*MAFSTAEASSS
Trigger: AGAGGAAGATGCCTCGGCTGTGCTGAAAGCCATCCAGGTGGAGAACGAAGCTCTGCAACAGGTCTTCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GCAGCTCAGGGATGTCCTCCTTGGCCTTCAGCAGACTaGACCAGGATTTTGCTGGTGGTTCCTTGGTATCCT +
Preference number: 6 (lower is better)
Translates to: AAQGCPPWPSAD*TRILLVVPWYP
Trigger: AGGATACCAAGGAACCACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCAAGGAGGACATCCCTGAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GTGTGTGAACTCAATGGAGATGGTGTGGGTCATGCCTaGTGTGAAGGGGGCCAGCCAGACATGCATGTCATC +
Preference number: 6 (lower is better)
Translates to: VCELNGDGVGHA*CEGGQPDMHVI
Trigger: GATGACATGCATGTCTGGCTGGCCCCCTTCACACCAGGCATGACCCACACCATCTCCATTGAGTTCACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp AACCACATGTGCCTGCCATCGCTGGTGTCGTTGACTTaGTCGATAAGCTTGTCAGGGGTTCTCACATCCCCG +
Preference number: 6 (lower is better)
Translates to: NHMCLPSLVSLT*SISLSGVLTSP
Trigger: CGGGGATGTGAGAACCCCTGACAAGCTTATCGACCAAGTCAACGACACCAGCGATGGCAGGCACATGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CAA 72 bp ACTGCATCATGGCTGGGAAGTGGACATTCATCTCTGTaGTGGACTGGCAGGACAGGGTCCTCAGTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: TASWLGSGHSSL*WTGRTGSSVSV
Trigger: GACGGAGACTGAGGACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp CTTCCTCTCGGTCCTCAGCTGCATATGCTTTGCGGGTaGCTGACAAGGGTCTATCTCTCCGGCTTCCAGATC +
Preference number: 6 (lower is better)
Translates to: LPLGPQLHMLCG*LTRVYLSGFQI
Trigger: GATCTGGAAGCCGGAGAGATAGACCCTTGTCAGCAACCCGCAAAGCATATGCAGCTGAGGACCGAGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp GAGGCATCTTCCTCTCGGTCCTCAGCTGCATATGCTTaGCGGGTTGCTGACAAGGGTCTATCTCTCCGGCTT +
Preference number: 6 (lower is better)
Translates to: EASSSRSSAAYA*RVADKGLSLRL
Trigger: AAGCCGGAGAGATAGACCCTTGTCAGCAACCCGCAAAGCATATGCAGCTGAGGACCGAGAGGAAGATGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp TGTCCTCCTTGGCCTTCAGCAGACTGGACCAGGATTTaGCTGGTGGTTCCTTGGTATCCTGCTGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: CPPWPSADWTRI*LVVPWYPAVDW
Trigger: CCAGTCCACAGCAGGATACCAAGGAACCACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCAAGGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp ACTGGAGTAGCAGGAAGCAGCTCAGGGATGTCCTCCTaGGCCTTCAGCAGACTGGACCAGGATTTTGCTGGT +
Preference number: 6 (lower is better)
Translates to: TGVAGSSSGMSS*AFSRLDQDFAG
Trigger: ACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCAAGGAGGACATCCCTGAGCTGCTTCCTGCTACTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp CTGCCATCGCTGGTGTCGTTGACTTGGTCGATAAGCTaGTCAGGGGTTCTCACATCCCCGCAAACACCCTCT +
Preference number: 6 (lower is better)
Translates to: LPSLVSLTWSIS*SGVLTSPQTPS
Trigger: AGAGGGTGTTTGCGGGGATGTGAGAACCCCTGACAAGCTTATCGACCAAGTCAACGACACCAGCGATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CAA 72 bp CAACCACATGTGCCTGCCATCGCTGGTGTCGTTGACTaGGTCGATAAGCTTGTCAGGGGTTCTCACATCCCC +
Preference number: 6 (lower is better)
Translates to: QPHVPAIAGVVD*VDKLVRGSHIP
Trigger: GGGGATGTGAGAACCCCTGACAAGCTTATCGACCAAGTCAACGACACCAGCGATGGCAGGCACATGTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CAA 90 bp TCCTTCTGTACTGCATCATGGCTGGGAAGTGGACATTCATCTCTGTaGTGGACTGGCAGGACAGGGTCCTCAGTCTCCGTCTCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: SFCTASWLGSGHSSL*WTGRTGSSVSVSER
Trigger: CCTCTCTGAGACGGAGACTGAGGACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp TCTGGGAACACAGCTGGGGGCTGTGGATTCAGGACAGAGTCTGGTTaGCTGGGGATGAAGACCTCAGCATTCTCCTTCCGCTTAGCAGAT +
Preference number: 6 (lower is better)
Translates to: SGNTAGGCGFRTESG*LGMKTSAFSFRLAD
Trigger: ATCTGCTAAGCGGAAGGAGAATGCTGAGGTCTTCATCCCCAGCAAACCAGACTCTGTCCTGAATCCACAGCCCCCAGCTGTGTTCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp GCTCAGGGATGTCCTCCTTGGCCTTCAGCAGACTGGACCAGGATTTaGCTGGTGGTTCCTTGGTATCCTGCTGTGGACTGGTATGTAGCT +
Preference number: 6 (lower is better)
Translates to: AQGCPPWPSADWTRI*LVVPWYPAVDWYVA
Trigger: AGCTACATACCAGTCCACAGCAGGATACCAAGGAACCACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCAAGGAGGACATCCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp CCAAGCTCCCTAGCATCACTCAAGGCAGCCATCTTGAGGGCACCTTaGCTTTCTTTCCAGCCAGTGCTCAAGGCCTTGTCTGAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: PSSLASLKAAILRAP*LSFQPVLKALSELS
Trigger: TGAGAGCTCAGACAAGGCCTTGAGCACTGGCTGGAAAGAAAGCAAAGGTGCCCTCAAGATGGCTGCCTTGAGTGATGCTAGGGAGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp GAGGTTCAATGTGGAGACGAGAGCCAGCTTCAGTTCTaGTCTGCACAGATTTCTGGTGCCATCCTCGGCGCT +
Preference number: 6 (lower is better)
Translates to: EVQCGDESQLQF*SAQISGAILGA
Trigger: AGCGCCGAGGATGGCACCAGAAATCTGTGCAGATCAGAACTGAAGCTGGCTCTCGTCTCCACATTGAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp CTCAAGGCCTTGTCTGAGCTCTCATTCCTCTCTCTCTaGAGGTCCACGGGGATGGTACAATCAGAAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LKALSELSFLSL*RSTGMVQSEGA
Trigger: AGCCCCTTCTGATTGTACCATCCCCGTGGACCTTCAGAGAGAGAGGAATGAGAGCTCAGACAAGGCCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp CTGGACCAGGATTTTGCTGGTGGTTCCTTGGTATCCTaGTGTGGACTGGTATGTAGCTCAGGATCGTGGCTG +
Preference number: 6 (lower is better)
Translates to: LDQDFAGGSLVS*CGLVCSSGSWL
Trigger: CAGCCACGATCCTGAGCTACATACCAGTCCACAGCAGGATACCAAGGAACCACCAGCAAAATCCTGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp CCAGGCCTTTTCTCAGCTCCTGTGTGTGCTCCCCAGTaGCATCCTCATGCTTGCCAATCACATCTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: PGLFSAPVCAPQ*HPHACQSHLLV
Trigger: CACAAGAAGATGTGATTGGCAAGCATGAGGATGCCACTGGGGAGCACACACAGGAGCTGAGAAAAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GGGGACATCCTTCTGTACTGCATCATGGCTGGGAAGTaGACATTCATCTCTGTTGTGGACTGGCAGGACAGG +
Preference number: 6 (lower is better)
Translates to: GDILLYCIMAGK*TFISVVDWQDR
Trigger: CCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GAACACAGCTGGGGGCTGTGGATTCAGGACAGAGTCTaGTTTGCTGGGGATGAAGACCTCAGCATTCTCCTT +
Preference number: 6 (lower is better)
Translates to: EHSWGLWIQDRV*FAGDEDLSILL
Trigger: AAGGAGAATGCTGAGGTCTTCATCCCCAGCAAACCAGACTCTGTCCTGAATCCACAGCCCCCAGCTGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp CTCCTTGGCCTTCAGCAGACTGGACCAGGATTTTGCTaGTGGTTCCTTGGTATCCTGCTGTGGACTGGTATG +
Preference number: 6 (lower is better)
Translates to: LLGLQQTGPGFC*WFLGILLWTGM
Trigger: CATACCAGTCCACAGCAGGATACCAAGGAACCACCAGCAAAATCCTGGTCCAGTCTGCTGAAGGCCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp CTCCTCCCACTAGCAGGGCGATCCCTGTTAGGAAGCTaGCTAAAGATGTCTAAGTCATCGCCACAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LLPLAGRSLLGS*LKMSKSSPQAL
Trigger: CAAAGCCTGTGGCGATGACTTAGACATCTTTAGCCAGCTTCCTAACAGGGATCGCCCTGCTAGTGGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp TGTCTTCAGCTCCGAGTTGGCCCCATTGACATAGACAGAGAAACCTaGCTCCAAGTGTTCCAGCCTCAGCTGCACAGGGTCCTTGGCTTT +
Preference number: 6 (lower is better)
Translates to: CLQLRVGPIDIDRET*LQVFQPQLHRVLGF
Trigger: AAAGCCAAGGACCCTGTGCAGCTGAGGCTGGAACACTTGGAGCAAGGTTTCTCTGTCTATGTCAATGGGGCCAACTCGGAGCTGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000148701.4
CDS TCA 72 bp TTTGCTTTCTTTCCAGCCAGTGCTCAAGGCCTTGTCTaGGCTCTCATTCCTCTCTCTCTGAAGGTCCACGGG +
Preference number: 6 (lower is better)
Translates to: FAFFPASAQGLV*ALIPLSLKVHG
Trigger: CCCGTGGACCTTCAGAGAGAGAGGAATGAGAGCTCAGACAAGGCCTTGAGCACTGGCTGGAAAGAAAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp AGCTCTCATTCCTCTCTCTCTGAAGGTCCACGGGGATaGTACAATCAGAAGGGGCTTCACCTCCTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: SSHSSLSEGPRG*YNQKGLHLLLS
Trigger: AGAAAGGAGGAGGTGAAGCCCCTTCTGATTGTACCATCCCCGTGGACCTTCAGAGAGAGAGGAATGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp CTAGCATCACTCAAGGCAGCCATCTTGAGGGCACCTTaGCTTTCTTTCCAGCCAGTGCTCAAGGCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: LASLKAAILRAP*LSFQPVLKALS
Trigger: AGACAAGGCCTTGAGCACTGGCTGGAAAGAAAGCAAAGGTGCCCTCAAGATGGCTGCCTTGAGTGATGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp CCATCGATTAACTTGTCCAGGGTCCGTGAGTCATCGTaGTACTCGGGCAGGTCATTTAAGTCCCTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PSINLSRVRESS*YSGRSFKSLGE
Trigger: CTCTCCCAGGGACTTAAATGACCTGCCCGAGTACAACGATGACTCACGGACCCTGGACAAGTTAATCGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp TCTAGCGCATTCACACTGTCTGGGAAGGCAGCAATATaGTTCTGGGACAATGGGATCCTCTCCCCATGCTCG +
Preference number: 6 (lower is better)
Translates to: SSAFTLSGKAAI*FWDNGILSPCS
Trigger: CGAGCATGGGGAGAGGATCCCATTGTCCCAGAACAATATTGCTGCCTTCCCAGACAGTGTGAATGCGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp ATGTTCATGCCATCGATTAACTTGTCCAGGGTCCGTGAGTCATCGTaGTACTCGGGCAGGTCATTTAAGTCCCTGGGAGAGGCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: MFMPSINLSRVRESS*YSGRSFKSLGEAES
Trigger: GCTCTCTGCCTCTCCCAGGGACTTAAATGACCTGCCCGAGTACAACGATGACTCACGGACCCTGGACAAGTTAATCGATGGCATGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp CAAACACCCTCTAGCGCATTCACACTGTCTGGGAAGGCAGCAATATaGTTCTGGGACAATGGGATCCTCTCCCCATGCTCGTCATACAGC +
Preference number: 6 (lower is better)
Translates to: QTPSSAFTLSGKAAI*FWDNGILSPCSSYS
Trigger: GCTGTATGACGAGCATGGGGAGAGGATCCCATTGTCCCAGAACAATATTGCTGCCTTCCCAGACAGTGTGAATGCGCTAGAGGGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp CTGCTCTTCTGTTCCAGATCTTTTTCAGGACTGAGCCACAGGGGTTaGGGCTTCCTGACTGTCTGTTTCTTGCCCATCCCTGCTAGAGAA +
Preference number: 6 (lower is better)
Translates to: LLFCSRSFSGLSHRG*GFLTVCFLPIPARE
Trigger: TTCTCTAGCAGGGATGGGCAAGAAACAGACAGTCAGGAAGCCCAAACCCCTGTGGCTCAGTCCTGAAAAAGATCTGGAACAGAAGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp CACATGTGCTCATCCTCGGTGGTGATGTTCATGCCATCGATTAACTaGTCCAGGGTCCGTGAGTCATCGTTGTACTCGGGCAGGTCATTT +
Preference number: 6 (lower is better)
Translates to: HMCSSSVVMFMPSIN*SRVRESSLYSGRSF
Trigger: AAATGACCTGCCCGAGTACAACGATGACTCACGGACCCTGGACAAGTTAATCGATGGCATGAACATCACCACCGAGGATGAGCACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp CTCGGGAGATTTATTGTAGTTCCAGAGACGCAGGCCAGCAATGCTTaGGGCTCTGTCAAAGTGGATCATAACCACATGGTCCAACCCAGG +
Preference number: 6 (lower is better)
Translates to: LGRFIVVPETQASNA*GSVKVDHNHMVQPR
Trigger: CCTGGGTTGGACCATGTGGTTATGATCCACTTTGACAGAGCCCAAAGCATTGCTGGCCTGCGTCTCTGGAACTACAATAAATCTCCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS TCA 72 bp CAAGATCCCCATCTGCTGTCCAGTAATTCCGAACCTTaGTCATGGTCAGACCGAAGTCACGAAGCTGTCGCA +
Preference number: 6 (lower is better)
Translates to: QDPHLLSSNSEP*SWSDRSHEAVA
Trigger: TGCGACAGCTTCGTGACTTCGGTCTGACCATGATCAAGGTTCGGAATTACTGGACAGCAGATGGGGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp TTTCCCTGGTCTCCACCTCTCCAGGAGTATCACCCATaGCATCCTCAGATGGAAACCTGCTCTTCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: FPWSPPLQEYHP*HPQMETCSSVP
Trigger: TGGAACAGAAGAGCAGGTTTCCATCTGAGGATGTCATGGGTGATACTCCTGGAGAGGTGGAGACCAGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TCCTGGTCCTTGGGGACATCCTTCTGTACTGCATCATaGCTGGGAAGTGGACATTCATCTCTGTTGTGGACT +
Preference number: 6 (lower is better)
Translates to: SWSLGTSFCTAS*LGSGHSSLLWT
Trigger: AGTCCACAACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GCATTCACACTGTCTGGGAAGGCAGCAATATTGTTCTaGGACAATGGGATCCTCTCCCCATGCTCGTCATAC +
Preference number: 6 (lower is better)
Translates to: AFTLSGKAAILF*DNGILSPCSSY
Trigger: GTATGACGAGCATGGGGAGAGGATCCCATTGTCCCAGAACAATATTGCTGCCTTCCCAGACAGTGTGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp TGTTCCAGATCTTTTTCAGGACTGAGCCACAGGGGTTaGGGCTTCCTGACTGTCTGTTTCTTGCCCATCCCT +
Preference number: 6 (lower is better)
Translates to: CSRSFSGLSHRG*GFLTVCFLPIP
Trigger: AGGGATGGGCAAGAAACAGACAGTCAGGAAGCCCAAACCCCTGTGGCTCAGTCCTGAAAAAGATCTGGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp AGTGTCACTTTCCATAGTCTGCAAGACTCCCACAAGTTTATGCTGTaGTCTGCTTCCCAAAGGGCTCATTCCGTCCATGGCTTGGCTGAC +
Preference number: 6 (lower is better)
Translates to: SVTFHSLQDSHKFML*SASQRAHSVHGLAD
Trigger: GTCAGCCAAGCCATGGACGGAATGAGCCCTTTGGGAAGCAGACAACAGCATAAACTTGTGGGAGTCTTGCAGACTATGGAAAGTGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp TGGCTAAAGATGTCTAAGTCATCGCCACAGGCTTTGGAGAATGCTTaGGGGGCTCTCTCTTCAGTGATGACATTCCAGCTGCTAGTCCTC +
Preference number: 6 (lower is better)
Translates to: WLKMSKSSPQALENA*GALSSVMTFQLLVL
Trigger: GAGGACTAGCAGCTGGAATGTCATCACTGAAGAGAGAGCCCCCAAAGCATTCTCCAAAGCCTGTGGCGATGACTTAGACATCTTTAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp CTCCTTCAAAGATGCACTGAGTATCCAACAGCATCGTaGTGTCCTTCACACCTCGGAAGGAGTGGATTCGAG +
Preference number: 6 (lower is better)
Translates to: LLQRCTEYPTAS*CPSHLGRSGFE
Trigger: CTCGAATCCACTCCTTCCGAGGTGTGAAGGACATCACGATGCTGTTGGATACTCAGTGCATCTTTGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp TTCCAGTTCCTGGTCCTTGGGGACATCCTTCTGTACTaGATCATGGCTGGGAAGTGGACATTCATCTCTGTT +
Preference number: 6 (lower is better)
Translates to: FQFLVLGDILLY*IMAGKWTFISV
Trigger: AACAGAGATGAATGTCCACTTCCCAGCCATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp AGTGCTCAGGGGCTCCCATCAGAGTTCCTGAGGCTTTaGCAATTTCTCCTTCAAAGATGCACTGAGTATCCA +
Preference number: 6 (lower is better)
Translates to: SAQGLPSEFLRL*QFLLQRCTEYP
Trigger: TGGATACTCAGTGCATCTTTGAAGGAGAAATTGCCAAAGCCTCAGGAACTCTGATGGGAGCCCCTGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp TTCCATAGTCTGCAAGACTCCCACAAGTTTATGCTGTaGTCTGCTTCCCAAAGGGCTCATTCCGTCCATGGC +
Preference number: 6 (lower is better)
Translates to: FHSLQDSHKFML*SASQRAHSVHG
Trigger: GCCATGGACGGAATGAGCCCTTTGGGAAGCAGACAACAGCATAAACTTGTGGGAGTCTTGCAGACTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp ATGTCTAAGTCATCGCCACAGGCTTTGGAGAATGCTTaGGGGGCTCTCTCTTCAGTGATGACATTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: MSKSSPQALENA*GALSSVMTFQL
Trigger: CAGCTGGAATGTCATCACTGAAGAGAGAGCCCCCAAAGCATTCTCCAAAGCCTGTGGCGATGACTTAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp AGCTGGCTAAAGATGTCTAAGTCATCGCCACAGGCTTaGGAGAATGCTTTGGGGGCTCTCTCTTCAGTGATG +
Preference number: 6 (lower is better)
Translates to: SWLKMSKSSPQA*ENALGALSSVM
Trigger: CATCACTGAAGAGAGAGCCCCCAAAGCATTCTCCAAAGCCTGTGGCGATGACTTAGACATCTTTAGCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp CTGTTAGGAAGCTGGCTAAAGATGTCTAAGTCATCGCCACAGGCTTaGGAGAATGCTTTGGGGGCTCTCTCTTCAGTGATGACATTCCAG +
Preference number: 6 (lower is better)
Translates to: LLGSWLKMSKSSPQA*ENALGALSSVMTFQ
Trigger: CTGGAATGTCATCACTGAAGAGAGAGCCCCCAAAGCATTCTCCAAAGCCTGTGGCGATGACTTAGACATCTTTAGCCAGCTTCCTAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp GTCTGCCGTTATGCTGGAAATCTGTACTGGTTCCCCTaGGGAGCTGAATATTTCTATGCCGTTAAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: VCRYAGNLYWFP*GAEYFYAVKAN
Trigger: GTTGGCCTTAACGGCATAGAAATATTCAGCTCCTCAGGGGAACCAGTACAGATTTCCAGCATAACGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp ACAGAGAAACCTTGCTCCAAGTGTTCCAGCCTCAGCTaGACAGGGTCCTTGGCTTTCAAATGCTTTAGTATC +
Preference number: 6 (lower is better)
Translates to: TEKPCSKCSSLS*TGSLAFKCFSI
Trigger: GATACTAAAGCATTTGAAAGCCAAGGACCCTGTGCAGCTGAGGCTGGAACACTTGGAGCAAGGTTTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000148701.4
CDS GCA 72 bp GCTCCTGTGTGTGCTCCCCAGTGGCATCCTCATGCTTaGCAATCACATCTTCTTGTGATTCAAAATCTTCTG +
Preference number: 6 (lower is better)
Translates to: APVCAPQWHPHA*QSHLLVIQNLL
Trigger: CAGAAGATTTTGAATCACAAGAAGATGTGATTGGCAAGCATGAGGATGCCACTGGGGAGCACACACAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp TCACTTTCCATAGTCTGCAAGACTCCCACAAGTTTATaGTGTTGTCTGCTTCCCAAAGGGCTCATTCCGTCC +
Preference number: 6 (lower is better)
Translates to: SLSIVCKTPTSL*CCLLPKGLIPS
Trigger: GGACGGAATGAGCCCTTTGGGAAGCAGACAACAGCATAAACTTGTGGGAGTCTTGCAGACTATGGAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GAATTTGGTACTGGCTTCTCTGTTGGTATAGCCACCTaGCTGAGATGGGTAGTGTCACTTTCCATAGTCTGC +
Preference number: 6 (lower is better)
Translates to: EFGTGFSVGIAT*LRWVVSLSIVC
Trigger: GCAGACTATGGAAAGTGACACTACCCATCTCAGCCAGGTGGCTATACCAACAGAGAAGCCAGTACCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TCGGGGATTTTCCTACCTCTGAGACTTTCCAGCTGTTaGATCAAAGAGGGCTCCTCTTCTAGAGGAAGACAT +
Preference number: 6 (lower is better)
Translates to: SGIFLPLRLSSC*IKEGSSSRGRH
Trigger: ATGTCTTCCTCTAGAAGAGGAGCCCTCTTTGATCCAACAGCTGGAAAGTCTCAGAGGTAGGAAAATCCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp CACCTCTCCAGGAGTATCACCCATGACATCCTCAGATaGAAACCTGCTCTTCTGTTCCAGATCTTTTTCAGG +
Preference number: 6 (lower is better)
Translates to: HLSRSITHDILR*KPALLFQIFFR
Trigger: CCTGAAAAAGATCTGGAACAGAAGAGCAGGTTTCCATCTGAGGATGTCATGGGTGATACTCCTGGAGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp GTCATCCACCAGCAGGCCAAACTCCTTCACTCCTCGTaGAGGCGTTTTCGTGTAATTCCACAGTTTGATCAT +
Preference number: 6 (lower is better)
Translates to: VIHQQAKLLHSS*RRFRVIPQFDH
Trigger: ATGATCAAACTGTGGAATTACACGAAAACGCCTCAACGAGGAGTGAAGGAGTTTGGCCTGCTGGTGGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp TGGCTTCCTCCTCGAGGTAGTGATGACCTGGTTTTCATTCATCATTaGTATGTCCTGGTCTTCCTCCGGCTTACTGATGATGGCGTGTTT +
Preference number: 6 (lower is better)
Translates to: WLPPRGSDDLVFIHH*YVLVFLRLTDDGVF
Trigger: AAACACGCCATCATCAGTAAGCCGGAGGAAGACCAGGACATACAAATGATGAATGAAAACCAGGTCATCACTACCTCGAGGAGGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 90 bp GTGGATTCGAGACTTATTGTAATTCCAAATCCTAATCAGGGCAACTaGGCAAGGGTGTGTGAACTCAATGGAGATGGTGTGGGTCATGCC +
Preference number: 6 (lower is better)
Translates to: VDSRLIVIPNPNQGN*ARVCELNGDGVGHA
Trigger: GGCATGACCCACACCATCTCCATTGAGTTCACACACCCTTGCCAAGTTGCCCTGATTAGGATTTGGAATTACAATAAGTCTCGAATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp CAGATCAAAGAACTGGACTTCTGTGAGACCCACCCATaGTGCATTGCCCCAGTTAGACAGGATTTCCATAGT +
Preference number: 6 (lower is better)
Translates to: QIKELDFCETHP*CIAPVRQDFHS
Trigger: ACTATGGAAATCCTGTCTAACTGGGGCAATGCATCATGGGTGGGTCTCACAGAAGTCCAGTTCTTTGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS GCA 72 bp ACCTGGCTGAGATGGGTAGTGTCACTTTCCATAGTCTaGAAGACTCCCACAAGTTTATGCTGTTGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: TWLRWVVSLSIV*KTPTSLCCCLL
Trigger: AAGCAGACAACAGCATAAACTTGTGGGAGTCTTGCAGACTATGGAAAGTGACACTACCCATCTCAGCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp TCAAAATCTTCTGAACAGTCCAGAGGAGGTTCAATGTaGAGACGAGAGCCAGCTTCAGTTCTGATCTGCACA +
Preference number: 6 (lower is better)
Translates to: SKSSEQSRGGSM*RREPASVLICT
Trigger: TGTGCAGATCAGAACTGAAGCTGGCTCTCGTCTCCACATTGAACCTCCTCTGGACTGTTCAGAAGATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CCA 72 bp GATGTCAATAACCAAGTGCTGTCCATAAGGGAGGACTaGGATTTTAAAGTCGCTGTCACCACCCATCTCTGT +
Preference number: 6 (lower is better)
Translates to: DVNNQVLSIRED*DFKVAVTTHLC
Trigger: ACAGAGATGGGTGGTGACAGCGACTTTAAAATCCCAGTCCTCCCTTATGGACAGCACTTGGTTATTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp AGCTCCTGTGTGTGCTCCCCAGTGGCATCCTCATGCTaGCCAATCACATCTTCTTGTGATTCAAAATCTTCT +
Preference number: 6 (lower is better)
Translates to: SSCVCSPVASSC*PITSSCDSKSS
Trigger: AGAAGATTTTGAATCACAAGAAGATGTGATTGGCAAGCATGAGGATGCCACTGGGGAGCACACACAGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp TTTATTGTAGTTCCAGAGACGCAGGCCAGCAATGCTTaGGGCTCTGTCAAAGTGGATCATAACCACATGGTC +
Preference number: 6 (lower is better)
Translates to: FIVVPETQASNA*GSVKVDHNHMV
Trigger: GACCATGTGGTTATGATCCACTTTGACAGAGCCCAAAGCATTGCTGGCCTGCGTCTCTGGAACTACAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS CAA 72 bp GCAGGGGTTGCCAACAGTCTTACATCTTCCTGTAACTaGGACAAACTGTTCTTCAGGCCAGATGTAGAATTC +
Preference number: 6 (lower is better)
Translates to: AGVANSLTSSCN*DKLFFRPDVEF
Trigger: GAATTCTACATCTGGCCTGAAGAACAGTTTGTCCAAGTTACAGGAAGATGTAAGACTGTTGGCAACCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp CCTCGAGGTAGTGATGACCTGGTTTTCATTCATCATTaGTATGTCCTGGTCTTCCTCCGGCTTACTGATGAT +
Preference number: 6 (lower is better)
Translates to: PRGSDDLVFIHH*YVLVFLRLTDD
Trigger: ATCATCAGTAAGCCGGAGGAAGACCAGGACATACAAATGATGAATGAAAACCAGGTCATCACTACCTCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp TTGAGGCGTTTTCGTGTAATTCCACAGTTTGATCATTaGCACAGTGGTGGGCAGGTCGAAAATGACATACAC +
Preference number: 6 (lower is better)
Translates to: LRRFRVIPQFDH*HSGGQVENDIH
Trigger: GTGTATGTCATTTTCGACCTGCCCACCACTGTGTCAATGATCAAACTGTGGAATTACACGAAAACGCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000132204.3
CDS TCA 72 bp TTCGATCTCATCTACTCTTGCTTTCCACTTTTCCTCTaGATTTGGTACTGGCTTCTCTGTTGGTATAGCCAC +
Preference number: 6 (lower is better)
Translates to: FDLIYSCFPLFL*IWYWLLCWYSH
Trigger: GTGGCTATACCAACAGAGAAGCCAGTACCAAATTCAGAGGAAAAGTGGAAAGCAAGAGTAGATGAGATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS CAA 72 bp AGACTTATTGTAATTCCAAATCCTAATCAGGGCAACTaGGCAAGGGTGTGTGAACTCAATGGAGATGGTGTG +
Preference number: 6 (lower is better)
Translates to: RLIVIPNPNQGN*ARVCELNGDGV
Trigger: CACACCATCTCCATTGAGTTCACACACCCTTGCCAAGTTGCCCTGATTAGGATTTGGAATTACAATAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
CDS TCA 72 bp TTGGCTTTCAAATGCTTTAGTATCCGGTTTCTCTGCTaGAGCAATATTAAATACTCATCATGTTTCTCATCA +
Preference number: 6 (lower is better)
Translates to: LAFKCFSIRFLC*SNIKYSSCFSS
Trigger: TGATGAGAAACATGATGAGTATTTAATATTGCTTCAGCAGAGAAACCGGATACTAAAGCATTTGAAAGCCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069660.13
ENSMUST00000124223.8
ENSMUST00000148701.4