RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KATNB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031787

Ensembl transcript IDs: ENSMUST00000034239.9, ENSMUST00000212968.2

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTTCGCTCTGTGGAGTTGGGCCCTGGGTCCCGCCGCACAGAGCTaGGTTCCTGGTCAAGCCAGGAGCACCTGGAGGTACTGGGGGATG +
Preference number: 1 (lower is better)
Translates to: GFALWSWALGPAAQS*VPGQARSTWRYWGM
Trigger: CATCCCCCAGTACCTCCAGGTGCTCCTGGCTTGACCAGGAACCCAGCTCTGTGCGGCGGGACCCAGGGCCCAACTCCACAGAGCGAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp CAAGTCAAGCTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTaGTGGCCCCTGCTGGCCACAGATGGAGGCTGCACTGGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: QVKLTRQPLASCLAL*WPLLATDGGCTGPG
Trigger: TCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGCTTGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR GCA 90 bp CCGCCCGGGACTCTCGCTCGTCCCTGTCATCTTCGCTGCTGGGGCTaGGCCGCTCGCTCTCTGAGTTGTGCTTTACCCTCTGAGGCTTGC +
Preference number: 1 (lower is better)
Translates to: PPGTLARPCHLRCWG*AARSLSCALPSEAC
Trigger: GCAAGCCTCAGAGGGTAAAGCACAACTCAGAGAGCGAGCGGCGCAGCCCCAGCAGCGAAGATGACAGGGACGAGCGAGAGTCCCGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp GGCTGCGGGTGCTCCCACCGTGTGCTCCTCAGTCCAAACTGGCCATaGGTAGGTGCAGCTCACGGAAGGCACTGCCATGGCGGCCACTCA +
Preference number: 1 (lower is better)
Translates to: GCGCSHRVLLSPNWP*VGAAHGRHCHGGHS
Trigger: TGAGTGGCCGCCATGGCAGTGCCTTCCGTGAGCTGCACCTACTCATGGCCAGTTTGGACTGAGGAGCACACGGTGGGAGCACCCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp GCCGGAGAGGAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTaGCAACCATGCCTCCAGGATGGCCAGCAGGGCAGGAATGGAGGC +
Preference number: 1 (lower is better)
Translates to: AGEELSPQPRRWSAG*QPCLQDGQQGRNGG
Trigger: GCCTCCATTCCTGCCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTCCTCTCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR CCA 90 bp ACTGCAGCTGCTGCCGGAGAGGAGCTTAGTCCACAACCGAGGAGGTaGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGC +
Preference number: 1 (lower is better)
Translates to: TAAAAGEELSPQPRR*SAGWQPCLQDGQQG
Trigger: GCCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTCCTCTCCGGCAGCAGCTGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR CCA 90 bp GGATCTCCGCCCGGGACTCTCGCTCGTCCCTGTCATCTTCGCTGCTaGGGCTGCGCCGCTCGCTCTCTGAGTTGTGCTTTACCCTCTGAG +
Preference number: 1 (lower is better)
Translates to: GSPPGTLARPCHLRC*GCAARSLSCALPSE
Trigger: CTCAGAGGGTAAAGCACAACTCAGAGAGCGAGCGGCGCAGCCCCAGCAGCGAAGATGACAGGGACGAGCGAGAGTCCCGGGCGGAGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp TCTGGATCTCCGCCCGGGACTCTCGCTCGTCCCTGTCATCTTCGCTaGTGGGGCTGCGCCGCTCGCTCTCTGAGTTGTGCTTTACCCTCT +
Preference number: 1 (lower is better)
Translates to: SGSPPGTLARPCHLR*WGCAARSLSCALPS
Trigger: AGAGGGTAAAGCACAACTCAGAGAGCGAGCGGCGCAGCCCCAGCAGCGAAGATGACAGGGACGAGCGAGAGTCCCGGGCGGAGATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp CGGCGGAGGGAGACACCAGGGTTAGGGGTCTGTTGTGTCAGAGGCTaGTTAGCCTGCACAGGGTCCTGGGTCACAGTTCCCGTCCTGGTG +
Preference number: 1 (lower is better)
Translates to: RRRETPGLGVCCVRG*LACTGSWVTVPVLV
Trigger: CACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCTGACACAACAGACCCCTAACCCTGGTGTCTCCCTCCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp CTCAGTGGTGACAGCAAGACCCTTATGGTGGTACAGGTGAGGGCCTaGGGTTCAGCAAGAGCCTCCCCAGGCTGCTGGCTCCCCCTACCC +
Preference number: 1 (lower is better)
Translates to: LSGDSKTLMVVQVRA*GSARASPGCWLPLP
Trigger: GGGTAGGGGGAGCCAGCAGCCTGGGGAGGCTCTTGCTGAACCTCAGGCCCTCACCTGTACCACCATAAGGGTCTTGCTGTCACCACTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp GTGCTCCCACCGTGTGCTCCTCAGTCCAAACTGGCCATGAGTAGGTaGAGCTCACGGAAGGCACTGCCATGGCGGCCACTCAAACCCGAC +
Preference number: 1 (lower is better)
Translates to: VLPPCAPQSKLAMSR*SSRKALPWRPLKPD
Trigger: GTCGGGTTTGAGTGGCCGCCATGGCAGTGCCTTCCGTGAGCTGCACCTACTCATGGCCAGTTTGGACTGAGGAGCACACGGTGGGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp CTCCGGGGTGGTGTCCGACCTGCCAAGGCAAAGGGGGCTGACACTTaGGTTCCCATGTGCTCTCTGGGAAGAGGCCCTGTATGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: LRGGVRPAKAKGADT*VPMCSLGRGPVCGS
Trigger: TGAGCCACATACAGGGCCTCTTCCCAGAGAGCACATGGGAACCCAAGTGTCAGCCCCCTTTGCCTTGGCAGGTCGGACACCACCCCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp CTCACTTCTCCGGGGTGGTGTCCGACCTGCCAAGGCAAAGGGGGCTaGCACTTGGGTTCCCATGTGCTCTCTGGGAAGAGGCCCTGTATG +
Preference number: 1 (lower is better)
Translates to: LTSPGWCPTCQGKGG*HLGSHVLSGKRPCM
Trigger: CATACAGGGCCTCTTCCCAGAGAGCACATGGGAACCCAAGTGTCAGCCCCCTTTGCCTTGGCAGGTCGGACACCACCCCGGAGAAGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp CTTGCCAGCCGTCAGATCCCAAAGCTTCACTGTGTGGTCATCTGCTaGCGACGCCAGCCACTTCCCATCAGGGCTGAACCGGAGACACCG +
Preference number: 1 (lower is better)
Translates to: LASRQIPKLHCVVIC*RRQPLPIRAEPETP
Trigger: CGGTGTCTCCGGTTCAGCCCTGATGGGAAGTGGCTGGCGTCGGCAGCAGATGACCACACAGTGAAGCTTTGGGATCTGACGGCTGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp TGCCCACAGTGGGCTCCCCTGACCAGAAACACCCTCTGGTGGCCATaGTGCTACCTCCTGTGCTGTACCATGAGCTCTCTGTCCCCTAGG +
Preference number: 1 (lower is better)
Translates to: CPQWAPLTRNTLWWP*CYLLCCTMSSLSPR
Trigger: CCTAGGGGACAGAGAGCTCATGGTACAGCACAGGAGGTAGCAGCATGGCCACCAGAGGGTGTTTCTGGTCAGGGGAGCCCACTGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp CACCGGCAACTGCGGCAACTGCACATCCATGGCTGGGCTGGGTTTTaGGACCTCCTTCACTGTGGCTGCATCATCTTCTGGGGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: HRQLRQLHIHGWAGF*DLLHCGCIIFWGCW
Trigger: CCAGCACCCCCAGAAGATGATGCAGCCACAGTGAAGGAGGTCTCAAAACCCAGCCCAGCCATGGATGTGCAGTTGCCGCAGTTGCCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp AGTGGAGAAGAACACCAGCGAGACTCTGTACTCCCTCAGATTTGCTaGGAGGGTTCGCTCTGTGGAGTTGGGCCCTGGGTCCCGCCGCAC +
Preference number: 1 (lower is better)
Translates to: SGEEHQRDSVLPQIC*EGSLCGVGPWVPPH
Trigger: GTGCGGCGGGACCCAGGGCCCAACTCCACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTCGCTGGTGTTCTTCTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp AGGACTCACTCAGTGGTGACAGCAAGACCCTTATGGTGGTACAGGTaGGGGCCTGAGGTTCAGCAAGAGCCTCCCCAGGCTGCTGGCTCC +
Preference number: 1 (lower is better)
Translates to: RTHSVVTARPLWWYR*GPEVQQEPPQAAGS
Trigger: GGAGCCAGCAGCCTGGGGAGGCTCTTGCTGAACCTCAGGCCCTCACCTGTACCACCATAAGGGTCTTGCTGTCACCACTGAGTGAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp GAGACACCAGGGTTAGGGGTCTGTTGTGTCAGAGGCTGGTTAGCCTaGACAGGGTCCTGGGTCACAGTTCCCGTCCTGGTGACTCTCGTC +
Preference number: 1 (lower is better)
Translates to: ETPGLGVCCVRGWLA*TGSWVTVPVLVTLV
Trigger: GACGAGAGTCACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCTGACACAACAGACCCCTAACCCTGGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp GGTCGTGCTGGGACCTCGAGATTTGGCACCGGCAACTGCGGCAACTaGACATCCATGGCTGGGCTGGGTTTTGAGACCTCCTTCACTGTG +
Preference number: 1 (lower is better)
Translates to: GRAGTSRFGTGNCGN*TSMAGLGFETSFTV
Trigger: CACAGTGAAGGAGGTCTCAAAACCCAGCCCAGCCATGGATGTGCAGTTGCCGCAGTTGCCGGTGCCAAATCTCGAGGTCCCAGCACGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp ATGACTGACGGTCGTGCTGGGACCTCGAGATTTGGCACCGGCAACTaGGGCAACTGCACATCCATGGCTGGGCTGGGTTTTGAGACCTCC +
Preference number: 1 (lower is better)
Translates to: MTDGRAGTSRFGTGN*GNCTSMAGLGFETS
Trigger: GGAGGTCTCAAAACCCAGCCCAGCCATGGATGTGCAGTTGCCGCAGTTGCCGGTGCCAAATCTCGAGGTCCCAGCACGACCGTCAGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp CCACAGTGGGCTCCCCTGACCAGAAACACCCTCTGGTGGCCATGCTaGTACCTCCTGTGCTGTACCATGAGCTCTCTGTCCCCTAGGTGT +
Preference number: 1 (lower is better)
Translates to: PQWAPLTRNTLWWPC*YLLCCTMSSLSPRC
Trigger: ACACCTAGGGGACAGAGAGCTCATGGTACAGCACAGGAGGTAGCAGCATGGCCACCAGAGGGTGTTTCTGGTCAGGGGAGCCCACTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp GGCACAGCACATCAACAGGTCACTATCCGCCCTGGGGGACGTCATTaGTGCCCTGCGTTCTCGACAAGGCCATGTGCCCTTCCGCAATTC +
Preference number: 1 (lower is better)
Translates to: GTAHQQVTIRPGGRH*CPAFSTRPCALPQF
Trigger: GAATTGCGGAAGGGCACATGGCCTTGTCGAGAACGCAGGGCAGCAATGACGTCCCCCAGGGCGGATAGTGACCTGTTGATGTGCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp GATGATGTCAGGTTCACCCTTGGGTGCAGGAGTGGAAGTCATGACTaGCGGTCGTGCTGGGACCTCGAGATTTGGCACCGGCAACTGCGG +
Preference number: 1 (lower is better)
Translates to: DDVRFTLGCRSGSHD*RSCWDLEIWHRQLR
Trigger: CCGCAGTTGCCGGTGCCAAATCTCGAGGTCCCAGCACGACCGTCAGTCATGACTTCCACTCCTGCACCCAAGGGTGAACCTGACATCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp GTACACAAGTTCCTCCCCATGTTCACTGCCCACAGTGGGCTCCCCTaGCCAGAAACACCCTCTGGTGGCCATGCTGCTACCTCCTGTGCT +
Preference number: 1 (lower is better)
Translates to: VHKFLPMFTAHSGLP*PETPSGGHAATSCA
Trigger: AGCACAGGAGGTAGCAGCATGGCCACCAGAGGGTGTTTCTGGTCAGGGGAGCCCACTGTGGGCAGTGAACATGGGGAGGAACTTGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp CATCTTGCCAGCCGTCAGATCCCAAAGCTTCACTGTGTGGTCATCTaGTGCCGACGCCAGCCACTTCCCATCAGGGCTGAACCGGAGACA +
Preference number: 1 (lower is better)
Translates to: HLASRQIPKLHCVVI*CRRQPLPIRAEPET
Trigger: TGTCTCCGGTTCAGCCCTGATGGGAAGTGGCTGGCGTCGGCAGCAGATGACCACACAGTGAAGCTTTGGGATCTGACGGCTGGCAAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp GGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTGGAAGGGCTaGGTTCTGTTCATCTGCCTGACACCAGGCACTCTCCCTGCCCAC +
Preference number: 1 (lower is better)
Translates to: GLGYIYGWQRPVWKG*VLFICLTPGTLPAH
Trigger: GTGGGCAGGGAGAGTGCCTGGTGTCAGGCAGATGAACAGAACCCAGCCCTTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CCA 90 bp TTAGGGGTCTGTTGTGTCAGAGGCTGGTTAGCCTGCACAGGGTCCTaGGTCACAGTTCCCGTCCTGGTGACTCTCGTCAGGTCCACCACA +
Preference number: 1 (lower is better)
Translates to: LGVCCVRGWLACTGS*VTVPVLVTLVRSTT
Trigger: TGTGGTGGACCTGACGAGAGTCACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCTGACACAACAGACCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp TCCAAACTGGCCATGAGTAGGTGCAGCTCACGGAAGGCACTGCCATaGCGGCCACTCAAACCCGACTTGCTCTTGACGAGGCCACTGATG +
Preference number: 1 (lower is better)
Translates to: SKLAMSRCSSRKALP*RPLKPDLLLTRPLM
Trigger: CATCAGTGGCCTCGTCAAGAGCAAGTCGGGTTTGAGTGGCCGCCATGGCAGTGCCTTCCGTGAGCTGCACCTACTCATGGCCAGTTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp GCTGGCAGAGGCCAGTGTGGAAGGGCTGGGTTCTGTTCATCTGCCTaGCACCAGGCACTCTCCCTGCCCACTGATTCTCAACATGTTCCT +
Preference number: 1 (lower is better)
Translates to: AGRGQCGRAGFCSSA*HQALSLPTDSQHVP
Trigger: AGGAACATGTTGAGAATCAGTGGGCAGGGAGAGTGCCTGGTGTCAGGCAGATGAACAGAACCCAGCCCTTCCACACTGGCCTCTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 90 bp TCAGCTGGTCATTGCAGATGGCCAGGTCAGCCACCTTGCCCCAGTTaGCAAGGACCACATCAAAGCAGCGCTCAGGTTCCCAGCCGTAGA +
Preference number: 1 (lower is better)
Translates to: SAGHCRWPGQPPCPS*QGPHQSSAQVPSRR
Trigger: TCTACGGCTGGGAACCTGAGCGCTGCTTTGATGTGGTCCTTGTCAACTGGGGCAAGGTGGCTGACCTGGCCATCTGCAATGACCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp CCCTCTGTAGATGAACAAACACTGTTCCATTTCCCCAAGTCAAGCTaGCCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: PSVDEQTLFHFPKSS*PGSPLLRAWHSAGP
Trigger: GGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGCTTGACTTGGGGAAATGGAACAGTGTTTGTTCATCTACAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp GAAACACCCTCTGGTGGCCATGCTGCTACCTCCTGTGCTGTACCATaGGCTCTCTGTCCCCTAGGTGTCCCCAGTGGAGAAGAACACCAG +
Preference number: 1 (lower is better)
Translates to: ETPSGGHAATSCAVP*ALCPLGVPSGEEHQ
Trigger: CTGGTGTTCTTCTCCACTGGGGACACCTAGGGGACAGAGAGCTCATGGTACAGCACAGGAGGTAGCAGCATGGCCACCAGAGGGTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp GCCCATCCCAAAGGAGCCCGCTCACTGCCTTTGCCCCCAGGTGTTTaGGTTTGGCTACAACAACCGCACCACCGAGTTCACCAACCTGAA +
Preference number: 1 (lower is better)
Translates to: AHPKGARSLPLPPGV*VWLQQPHHRVHQPE
Trigger: TTCAGGTTGGTGAACTCGGTGGTGCGGTTGTTGTAGCCAAACTCAAACACCTGGGGGCAAAGGCAGTGAGCGGGCTCCTTTGGGATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp CCAGCACATGCTCCTGGCTCCATGAGCCCATATACACCTATAGCCTaGTTAGAGCTGGGCAGAAGGTTGGCAGGAGCCACCAGCAAGTGG +
Preference number: 1 (lower is better)
Translates to: PAHAPGSMSPYTPIA*LELGRRLAGATSKW
Trigger: CCACTTGCTGGTGGCTCCTGCCAACCTTCTGCCCAGCTCTAAGCAGGCTATAGGTGTATATGGGCTCATGGAGCCAGGAGCATGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp ACAGCACATCAACAGGTCACTATCCGCCCTGGGGGACGTCATTGCTaGCCTGCGTTCTCGACAAGGCCATGTGCCCTTCCGCAATTCCAA +
Preference number: 1 (lower is better)
Translates to: TAHQQVTIRPGGRHC*PAFSTRPCALPQFQ
Trigger: TTGGAATTGCGGAAGGGCACATGGCCTTGTCGAGAACGCAGGGCAGCAATGACGTCCCCCAGGGCGGATAGTGACCTGTTGATGTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp CTGGGCAGAAGGTTGGCAGGAGCCACCAGCAAGTGGTGCCGCCTCTaGTACAGGTGTCCAGCTAGGTTTCTGGTTTTAGAATTCAGCCTG +
Preference number: 1 (lower is better)
Translates to: LGRRLAGATSKWCRL*YRCPARFLVLEFSL
Trigger: CAGGCTGAATTCTAAAACCAGAAACCTAGCTGGACACCTGTAGCAGAGGCGGCACCACTTGCTGGTGGCTCCTGCCAACCTTCTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp AGAGTAGAAGCTGCCACAAAGGTGGGTGAGGCCAGAGCTCAGGCGTaGTTCTGCTTTCTTGAGACGGTCTCACTATGTAGCGCTGACCGG +
Preference number: 1 (lower is better)
Translates to: RVEAATKVGEARAQA*FCFLETVSLCSADR
Trigger: CCGGTCAGCGCTACATAGTGAGACCGTCTCAAGAAAGCAGAAGCACGCCTGAGCTCTGGCCTCACCCACCTTTGTGGCAGCTTCTACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp AAAGCACATAGGGTGGCATTGCCCATCCCAAAGGAGCCCGCTCACTaGCTTTGCCCCCAGGTGTTTGAGTTTGGCTACAACAACCGCACC +
Preference number: 1 (lower is better)
Translates to: KAHRVALPIPKEPAH*LCPQVFEFGYNNRT
Trigger: GGTGCGGTTGTTGTAGCCAAACTCAAACACCTGGGGGCAAAGGCAGTGAGCGGGCTCCTTTGGGATGGGCAATGCCACCCTATGTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp CCTGTCAGAGGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTaGAAGGGCTGGGTTCTGTTCATCTGCCTGACACCAGGCACTCTC +
Preference number: 1 (lower is better)
Translates to: PVRGLGYIYGWQRPV*KGWVLFICLTPGTL
Trigger: GAGAGTGCCTGGTGTCAGGCAGATGAACAGAACCCAGCCCTTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 90 bp CCCGACCACCCCATTCTCCTCCTCCTCGAGGCCACTTACGCTTTCTaGTTGACAATGTTCAGGAGGTCCACTACCACAGACAGGTCATTG +
Preference number: 1 (lower is better)
Translates to: PDHPILLLLEATYAF*LTMFRRSTTTDRSL
Trigger: CAATGACCTGTCTGTGGTAGTGGACCTCCTGAACATTGTCAATCAGAAAGCGTAAGTGGCCTCGAGGAGGAGGAGAATGGGGTGGTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp ATATCTCCTGTAGTCCATACAGCTCGGACAGTGTCCAGGTTCTTGTaGCGGCTGGTGAGCACCACAAACATGGTGTCGTGGCCTTTGCGT +
Preference number: 1 (lower is better)
Translates to: ISPVVHTARTVSRFL*RLVSTTNMVSWPLR
Trigger: ACGCAAAGGCCACGACACCATGTTTGTGGTGCTCACCAGCCGCCACAAGAACCTGGACACTGTCCGAGCTGTATGGACTACAGGAGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp TATAGAAGTCCTCACCCTGTCAGAGGTCTGGGCTATATTTATGGCTaGCAGAGGCCAGTGTGGAAGGGCTGGGTTCTGTTCATCTGCCTG +
Preference number: 1 (lower is better)
Translates to: YRSPHPVRGLGYIYG*QRPVWKGWVLFICL
Trigger: CAGGCAGATGAACAGAACCCAGCCCTTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGGGTGAGGACTTCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 90 bp TGCCAGAAGCTAGGAGATATTCATTGGGGTGAAACTCCACCACATTaGCAGGCCCTGTATGACCCGGGAACTCGGACATCATCTTGCCAG +
Preference number: 1 (lower is better)
Translates to: CQKLGDIHWGETPPH*QALYDPGTRTSSCQ
Trigger: CTGGCAAGATGATGTCCGAGTTCCCGGGTCATACAGGGCCTGTCAATGTGGTGGAGTTTCACCCCAATGAATATCTCCTAGCTTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp TCAAACTCAGGAGACCTGACTGCTGAGATTAAGGGTGTATGCCCGTaGCCCCTTCAGCCATCTTTGTCTTGGAGACCAGCAGTTGCCCAT +
Preference number: 1 (lower is better)
Translates to: SNSGDLTAEIKGVCP*PLQPSLSWRPAVAH
Trigger: ATGGGCAACTGCTGGTCTCCAAGACAAAGATGGCTGAAGGGGTCACGGGCATACACCCTTAATCTCAGCAGTCAGGTCTCCTGAGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp GTCCACTACCACAGACAGGTCATTGATGGCCACTGCAGAGTCCACTaGTGTCTTGATATCTCCTGTAGTCCATACAGCTCGGACAGTGTC +
Preference number: 1 (lower is better)
Translates to: VHYHRQVIDGHCRVH*CLDISCSPYSSDSV
Trigger: GACACTGTCCGAGCTGTATGGACTACAGGAGATATCAAGACATCAGTGGACTCTGCAGTGGCCATCAATGACCTGTCTGTGGTAGTGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp GCTGGCTGCATCAACAGGCTGTTCTGGAGCGCAGACTCTCAGGGATaGCACAAGTATAAAAGTAGTTTCCTGTGGCCTGTGAAAACCACT +
Preference number: 1 (lower is better)
Translates to: AGCINRLFWSADSQG*HKYKSSFLWPVKTT
Trigger: AGTGGTTTTCACAGGCCACAGGAAACTACTTTTATACTTGTGGCATCCCTGAGAGTCTGCGCTCCAGAACAGCCTGTTGATGCAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 90 bp AATGTCAGCACTTGGACAGAGGCAGGTGGATCTCTGCCAGATCAGTaGGTTCTACATAGTGAGTTCCAGGCCAGACAAGACTACAGAGAC +
Preference number: 1 (lower is better)
Translates to: NVSTWTEAGGSLPDQ*VLHSEFQARQDYRD
Trigger: GTCTCTGTAGTCTTGTCTGGCCTGGAACTCACTATGTAGAACTCACTGATCTGGCAGAGATCCACCTGCCTCTGTCCAAGTGCTGACATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 90 bp CCTGTGAAAACCACTCTAGAATCTTCCAAGGTCATGCAACCATCGTaGTCTAGTCTCTGGTGGCATCCAGAGGTCAGAGGGAGAGTTATG +
Preference number: 1 (lower is better)
Translates to: PVKTTLESSKVMQPS*SSLWWHPEVRGRVM
Trigger: CATAACTCTCCCTCTGACCTCTGGATGCCACCAGAGACTAGACCACGATGGTTGCATGACCTTGGAAGATTCTAGAGTGGTTTTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR GCA 90 bp TACACAGCTTTAATGTCAGCACTTGGACAGAGGCAGGTGGATCTCTaGCAGATCAGTGAGTTCTACATAGTGAGTTCCAGGCCAGACAAG +
Preference number: 1 (lower is better)
Translates to: YTALMSALGQRQVDL*QISEFYIVSSRPDK
Trigger: CTTGTCTGGCCTGGAACTCACTATGTAGAACTCACTGATCTGGCAGAGATCCACCTGCCTCTGTCCAAGTGCTGACATTAAAGCTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 90 bp TGGGTTCTGTTCATCTGCCTGACACCAGGCACTCTCCCTGCCCACTaGTTCTCAACATGTTCCTCTCCCCAAATCCTATTTAAGAACTTT +
Preference number: 1 (lower is better)
Translates to: WVLFICLTPGTLPAH*FSTCSSPQILFKNF
Trigger: AAAGTTCTTAAATAGGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAGTGCCTGGTGTCAGGCAGATGAACAGAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 90 bp GGCAGGCAGATCTCTGAGCTAGAGGGCAGCTTGGTATACACACTATaGCCTTGCCTCTGCCTAAAACCAAACAATAATAACAAAAACCTT +
Preference number: 1 (lower is better)
Translates to: GRQISELEGSLVYTL*PCLCLKPNNNNKNL
Trigger: AAGGTTTTTGTTATTATTGTTTGGTTTTAGGCAGAGGCAAGGTCATAGTGTGTATACCAAGCTGCCCTCTAGCTCAGAGATCTGCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 90 bp ATCATTTCTAGCACCTTGCGGGCCCCTATAACCATTCCATCCCATTaGAGTATCACCTCATGTTACAGAAGGAAAACTAGGCTTCAAAGA +
Preference number: 1 (lower is better)
Translates to: IISSTLRAPITIPSH*SITSCYRRKTRLQR
Trigger: TCTTTGAAGCCTAGTTTTCCTTCTGTAACATGAGGTGATACTGCAATGGGATGGAATGGTTATAGGGGCCCGCAAGGTGCTAGAAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR GCA 90 bp GCTGGAGTTGCCCTGAGCAGTAAGGGCTGTGCAAGACTGCAGCTGCTGCCGGAGGCAGGCTGGCAACCATaGCTCCAGGATGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: AGVALSSKGCARLQLLPEAGWQP*LQDGQQ
Trigger: CTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGC...CTCCGGCAGCAGCTGCAGTCTTGCACAGCCCTTACTGCTCAGGGCAACTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp AAGCTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCCTGCTGCGGGCTCCCCTTCAATaGAGCTCACCACCTGGAACT +
Preference number: 2 (lower is better)
Translates to: KLTRQPLASCLALCWPLLRAPLQ*SSPPGT
Trigger: AGTTCCAGGTGGTGAGCTGCATTGAAGGGGAGCCCG...CAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp CTGGGTCCCGCCGCACAGAGCTGGGTTCCTGGTCAAGCCAGGAGCACCTGGAGGCAGAGTCGACACTTGTaGAACCTCTCCTCTCGGCTG +
Preference number: 2 (lower is better)
Translates to: LGPAAQSWVPGQARSTWRQSRHL*NLSSRL
Trigger: CAGCCGAGAGGAGAGGTTGCACAAGTGTCGACTCTG...CCTCCAGGTGCTCCTGGCTTGACCAGGAACCCAGCTCTGTGCGGCGGGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp CGGTCCCAGCCCTGGAGAACAGGGCTTGCTAGGGCTCCTCCCTTCTaGCTGGCTGCATCAACAGGCTGTTCTGGAGCGCAGACTCTCAGG +
Preference number: 2 (lower is better)
Translates to: RSQPWRTGLARAPPF*LAASTGCSGAQTLR
Trigger: CCTGAGAGTCTGCGCTCCAGAACAGCCTGTTGATGCAGCCAGCAAGAAGGGAGGAGCCCTAGCAAGCCCTGTTCTCCAGGGCTGGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR TCA 90 bp AAGCTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCCTGCTGGAAACTCCACCACATTaGCAGGCCCTGTATGACCCG +
Preference number: 2 (lower is better)
Translates to: KLTRQPLASCLALCWPLLETPPH*QALYDP
Trigger: CGGGTCATACAGGGCCTGTCAATGTGGTGGAGTTTC...CAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp GCTGGCCACAGATGGAGGCTGCACTGGGCCTGGAGTACGACAGTCTCTGCTTCCAGGGCTGTGCAAGACTaGAGCTGCTGCCGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: AGHRWRLHWAWSTTVSASRAVQD*SCCRRG
Trigger: TCCTCTCCGGCAGCAGCTGCAGTCTTGCACAGCCCT...GGAAGCAGAGACTGTCGTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGCACTCTGCTGGCCCCTaGTGGCCACAGATGGAGGCT +
Preference number: 2 (lower is better)
Translates to: ELSPQPRRWSAGWQPCLQHSAGP*WPQMEA
Trigger: AGCCTCCATCTGTGGCCAGCAGGGGCCAGCAGAGTG...CTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp AGAGGTGTGGATTGCAGCACAGGCCTCCGCACCACGGGTGAGAGATGCACAGTGTCTGCTGGCCCCTGCTaGCCACAGATGGAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: RGVDCSTGLRTTGERCTVSAGPC*PQMEAA
Trigger: TGCAGCCTCCATCTGTGGCCAGCAGGGGCCAGCAGA...CACTGTGCATCTCTCACCCGTGGTGCGGAGGCCTGTGCTGCAATCCACACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp CTGCACAGGGTCCTGGGTCACAGTTCCCGTCCTGGTGACTCTCGTCAGGTCCACACACGCAGCGAGTCCTaGCAGCCGCTGTACAAGCAG +
Preference number: 2 (lower is better)
Translates to: LHRVLGHSSRPGDSRQVHTRSES*QPLYKQ
Trigger: CTGCTTGTACAGCGGCTGCCAGGACTCGCTGCGTGT...GTGGACCTGACGAGAGTCACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp CCGCTCATAGATGCGGCGGAGGGAGACACCAGGGTTAGGGGTCTGTaGTGTCAGAGGCTGGTTAGCCTGCACAGGGTCCTGGGTCACAGT +
Preference number: 2 (lower is better)
Translates to: PLIDAAEGDTRVRGL*CQRLVSLHRVLGHS
Trigger: ACTGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCTGACACAACAGACCCCTAACCCTGGTGTCTCCCTCCGCCGCATCTATGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp GGTTCACCCTTGGGTGCAGGAGTGGAAGTCATGACTGACGGTCGTGCTGGGACCTGTGTGGTCATCTGCTaGCGACGCCAGCCACTTCCC +
Preference number: 2 (lower is better)
Translates to: GSPLGAGVEVMTDGRAGTCVVIC*RRQPLP
Trigger: GGGAAGTGGCTGGCGTCGGCAGCAGATGACCACACA...GGTCCCAGCACGACCGTCAGTCATGACTTCCACTCCTGCACCCAAGGGTGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp GCTGGAGTTGCCCTGAGCAGTAAGGGCTGTGCAAGACTGCAGCTGCTGCCGGAGCACTGTGTGGTCATCTaGTGCCGACGCCAGCCACTT +
Preference number: 2 (lower is better)
Translates to: AGVALSSKGCARLQLLPEHCVVI*CRRQPL
Trigger: AAGTGGCTGGCGTCGGCAGCAGATGACCACACAGTG...CTCCGGCAGCAGCTGCAGTCTTGCACAGCCCTTACTGCTCAGGGCAACTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGTGCTGCATGTCGTGCTaGGCCGCTCATAGATGCGGC +
Preference number: 2 (lower is better)
Translates to: ELSPQPRRWSAGWQPCLQCCMSC*AAHRCG
Trigger: GCCGCATCTATGAGCGGCCCAGCACGACATGCAGCA...CTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp GCACCGGCAACTGCGGCAACTGCACATCCATGGCTGGGCTGGGTTTaGAGACCTCCTTCACTGTGGCTGCATCATCTTCTGGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: APATAATAHPWLGWV*RPPSLWLHHLLGVL
Trigger: CAGCACCCCCAGAAGATGATGCAGCCACAGTGAAGGAGGTCTCAAAACCCAGCCCAGCCATGGATGTGCAGTTGCCGCAGTTGCCGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR TCA 90 bp AGGAGGTCCACTACCACAGACAGGTCATTGATGGCCACTGCAGAGTCCACTGATGAATGGAGGCCAGGCTaGGGCTCGTGGGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: RRSTTTDRSLMATAESTDEWRPG*GSWATG
Trigger: GCCTGTGGCCCACGAGCCTCAGCCTGGCCTCCATTC...ATCAGTGGACTCTGCAGTGGCCATCAATGACCTGTCTGTGGTAGTGGACCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp CTCTGTCCCCTAGGTGTCCCCAGTGGAGAAGAACACCAGCGAGACTCTGTACTCCACTCTGCTGGCCCCTaGTGGCCACAGATGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LCPLGVPSGEEHQRDSVLHSAGP*WPQMEA
Trigger: AGCCTCCATCTGTGGCCAGCAGGGGCCAGCAGAGTG...GAGTACAGAGTCTCGCTGGTGTTCTTCTCCACTGGGGACACCTAGGGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp CTGCACAGGGTCCTGGGTCACAGTTCCCGTCCTGGTGACTCTCGTCAGGTCCACGCCACACCTATCAGCTaGTCATTGCAGATGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LHRVLGHSSRPGDSRQVHATPIS*SLQMAR
Trigger: CCTGGCCATCTGCAATGACCAGCTGATAGGTGTGGC...GTGGACCTGACGAGAGTCACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp CCAATGGGCTCATTCCGTGTGGCAGGGATGATGTCAGGTTCACCCTaGGGTGCAGGAGTGGAAGTCATGACTGACGGTCGTGCTGGGACC +
Preference number: 2 (lower is better)
Translates to: PMGSFRVAGMMSGSP*GAGVEVMTDGRAGT
Trigger: GGTCCCAGCACGACCGTCAGTCATGACTTCCACTCCTGCACCCAAGGGTGAACCTGACATCATCCCTGCCACACGGAATGAGCCCATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp AGGCACAGCACATCAACAGGTCACTATCCGCCCTGGGGGACGTCATaGCTGCCCTGCGTTCTCGACAAGGCCATGTGCCCTTCCGCAATT +
Preference number: 2 (lower is better)
Translates to: RHSTSTGHYPPWGTS*LPCVLDKAMCPSAI
Trigger: AATTGCGGAAGGGCACATGGCCTTGTCGAGAACGCAGGGCAGCAATGACGTCCCCCAGGGCGGATAGTGACCTGTTGATGTGCTGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR TCA 90 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGTCTTGTGGCGGCTGGTaGGCACCACAAACATGGTGT +
Preference number: 2 (lower is better)
Translates to: ELSPQPRRWSAGWQPCLQSCGGW*APQTWC
Trigger: ACACCATGTTTGTGGTGCTCACCAGCCGCCACAAGA...CTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp GCAAGAGCATCTCTATCTACCCTCCTGAGGAGGGGAGCCCTCACAGGGCATGTAAGGGCTGTGCAAGACTaGAGCTGCTGCCGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: ARASLSTLLRRGALTGHVRAVQD*SCCRRG
Trigger: TCCTCTCCGGCAGCAGCTGCAGTCTTGCACAGCCCT...TACATGCCCTGTGAGGGCTCCCCTCCTCAGGAGGGTAGATAGAGATGCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR GCA 90 bp AGATGCACAGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTGGGGCAGCGCCTCCCCATGTTCACTaGCCACAGTGGGCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: RCTVAILVKPSISIFGAAPPHVH*PQWAPL
Trigger: CAGGGGAGCCCACTGTGGGCAGTGAACATGGGGAGG...CGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACTGTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp CACCAGGCACTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCTCTGCTGGCCCCTGCTaGCCACAGATGGAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: HQALSLPTDSQHVPLPKSSAGPC*PQMEAA
Trigger: TGCAGCCTCCATCTGTGGCCAGCAGGGGCCAGCAGA...GGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAGTGCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR CCA 90 bp GGCCCTGTATGTGGCTCAGGTCTTAAGATAGACACATGGCTAGAGAGTGGTCCCCCCTTGCTTCGTGCCTaGCACTCTGCTGGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: GPVCGSGLKIDTWLESGPPLLRA*HSAGPC
Trigger: GCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGG...GGGACCACTCTCTAGCCATGTGTCTATCTTAAGACCTGAGCCACATACAGGGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp AACACCAGCGAGACTCTGTACTCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGCCCGCCGCACAGAGCTaGGTTCCTGGTCAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: NTSETLYSLRFAERVRSVPAAQS*VPGQAR
Trigger: CCTGGCTTGACCAGGAACCCAGCTCTGTGCGGCGGG...CACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTCGCTGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp AGATGCACAGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTGGGGCAGCGCTGGTTCAGAGCGTGTaGGCAAGTCGGGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: RCTVAILVKPSISIFGAALVQSV*ASRGLR
Trigger: CCTCAGCCCCCGACTTGCCCACACGCTCTGAACCAG...CGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACTGTGCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp GCCACACCTATCAGCTGGTCATTGCAGATGGCCAGGTCAGCCACCTaGCCCCAGTTGACAAGGACCACATCAAAGCAGCGCTCAGGTTCC +
Preference number: 2 (lower is better)
Translates to: ATPISWSLQMARSAT*PQLTRTTSKQRSGS
Trigger: GGAACCTGAGCGCTGCTTTGATGTGGTCCTTGTCAACTGGGGCAAGGTGGCTGACCTGGCCATCTGCAATGACCAGCTGATAGGTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp CCACAAAGGTGGGTGAGGCCAGAGCTCAGGCGTGCTTCTGCTTTCTaGAGACGGTCTCACTATGTAGCGCTGACCGGCCTAGAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: PQRWVRPELRRASAF*RRSHYVALTGLELA
Trigger: AGCAAGCTCTAGGCCGGTCAGCGCTACATAGTGAGACCGTCTCAAGAAAGCAGAAGCACGCCTGAGCTCTGGCCTCACCCACCTTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR TCA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCGAATGGAGGCCAGGCTaGGGCTCGTGGGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGEWRPG*GSWATG
Trigger: GCCTGTGGCCCACGAGCCTCAGCCTGGCCTCCATTC...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR GCA 90 bp GTCCAGGTTCTTGTGGCGGCTGGTGAGCACCACAAACATGGTGTCGTGGCCTTTAGAGGCTGGTTAGCCTaGACAGGGTCCTGGGTCACA +
Preference number: 2 (lower is better)
Translates to: VQVLVAAGEHHKHGVVAFRGWLA*TGSWVT
Trigger: TGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCT...AAAGGCCACGACACCATGTTTGTGGTGCTCACCAGCCGCCACAAGAACCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp ATGTTTAATTCCTGTCCCGTGACTTCTCAGGGCGGCAGGGTCATTAGTCCCCTCGTGGTCCCCAGCACATaGTCCTGGCTCCATGAGCCC +
Preference number: 2 (lower is better)
Translates to: MFNSCPVTSQGGRVISPLVVPST*SWLHEP
Trigger: GGGCTCATGGAGCCAGGAGCATGTGCTGGGGACCAC...GAGGGGACTAATGACCCTGCCGCCCTGAGAAGTCACGGGACAGGAATTAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp AGAGGTGTGGATTGCAGCACAGGCCTCCGCACCACGGGTGAGAGATGCACAGTGTGGTGTCGTGGCCTTTaGGTATCTGCGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: RGVDCSTGLRTTGERCTVWCRGL*VSATWH
Trigger: ATGCCATGTCGCAGATACGCAAAGGCCACGACACCA...CACTGTGCATCTCTCACCCGTGGTGCGGAGGCCTGTGCTGCAATCCACACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp GGTTCACCCTTGGGTGCAGGAGTGGAAGTCATGACTGACGGTCGTGCTGGGACCCATCCATGGCTGGGCTaGGTTTTGAGACCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: GSPLGAGVEVMTDGRAGTHPWLG*VLRPPS
Trigger: TGAAGGAGGTCTCAAAACCCAGCCCAGCCATGGATG...GGTCCCAGCACGACCGTCAGTCATGACTTCCACTCCTGCACCCAAGGGTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR TCA 90 bp GAGACTCTGTACTCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGGAGTTGGGCCAGGAGTGGAAGTCATaGCTGACGGTCGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ETLYSLRFAERVRSVELGQEWKS*LTVVLG
Trigger: TCCCAGCACGACCGTCAGTCATGACTTCCACTCCTG...GCCCAACTCCACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp GGCCCTGTATGTGGCTCAGGTCTTAAGATAGACACATGGCTAGAGAGTGGTCCCGCCACAGATGGAGGCTaGACTGGGCCTGGAGTACGA +
Preference number: 2 (lower is better)
Translates to: GPVCGSGLKIDTWLESGPATDGG*TGPGVR
Trigger: TCGTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGC...GGGACCACTCTCTAGCCATGTGTCTATCTTAAGACCTGAGCCACATACAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp TGGTTAGCCTGCACAGGGTCCTGGGTCACAGTTCCCGTCCTGGTGACTCTCGTCACTCGGACATCATCTTaGCAGCCGTCAGATCCCAAA +
Preference number: 2 (lower is better)
Translates to: WLACTGSWVTVPVLVTLVTRTSS*QPSDPK
Trigger: TTTGGGATCTGACGGCTGGCAAGATGATGTCCGAGT...GACGAGAGTCACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAGGCTAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp CACCACAAACATGGTGTCGTGGCCTTTGCGTATCTGCGACATGGCATCCTCGTCAGGTGGTCAGCAGGCTaGCAACCATGCCTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: HHKHGVVAFAYLRHGILVRWSAG*QPCLQD
Trigger: ATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCT...GACGAGGATGCCATGTCGCAGATACGCAAAGGCCACGACACCATGTTTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp TCACGGAAGGCACTGCCATGGCGGCCACTCAAACCCGACTTGCTCTaGACGAGGCCACTGATGCTCTTGAGTTGTTTGAAGCAGAGTCGA +
Preference number: 2 (lower is better)
Translates to: SRKALPWRPLKPDLL*TRPLMLLSCLKQSR
Trigger: TCGACTCTGCTTCAAACAACTCAAGAGCATCAGTGGCCTCGTCAAGAGCAAGTCGGGTTTGAGTGGCCGCCATGGCAGTGCCTTCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR TCA 90 bp TCTAGGCAGGCCACAATGTGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGTTGACAGGCCCTGTATaGCCCGGGAACTCGGACATC +
Preference number: 2 (lower is better)
Translates to: SRQATMCLGEPADIPLIRLTGPV*PGNSDI
Trigger: GATGTCCGAGTTCCCGGGTCATACAGGGCCTGTCAA...CCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACACATTGTGGCCTGCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp AGAGGTGTGGATTGCAGCACAGGCCTCCGCACCACGGGTGAGAGATGCACAGTGTTGTCCTGTCGGAGCTaGCAGAAGCTAGGAGATATT +
Preference number: 2 (lower is better)
Translates to: RGVDCSTGLRTTGERCTVLSCRS*QKLGDI
Trigger: AATATCTCCTAGCTTCTGGCAGCTCCGACAGGACAA...CACTGTGCATCTCTCACCCGTGGTGCGGAGGCCTGTGCTGCAATCCACACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp AACACCAGCGAGACTCTGTACTCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGAGGGGTAGGAACCGCTaGAGGATCAGCTTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: NTSETLYSLRFAERVRSVRGRNR*RISFRE
Trigger: CTCCCTGAAGCTGATCCTGCAGCGGTTCCTACCCCT...CACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTCGCTGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp GCAAGAGCATCTCTATCTACCCTCCTGAGGAGGGGAGCCCTCACAGGGCATGTAATCAACAGGCTGTTCTaGAGCGCAGACTCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: ARASLSTLLRRGALTGHVINRLF*SADSQG
Trigger: TCCCTGAGAGTCTGCGCTCCAGAACAGCCTGTTGAT...TACATGCCCTGTGAGGGCTCCCCTCCTCAGGAGGGTAGATAGAGATGCTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR CCA 90 bp AGATGCACAGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTGGGGCAGCGAGAAACACCCTCTGGTaGCCATGCTGCTACCTCCTG +
Preference number: 2 (lower is better)
Translates to: RCTVAILVKPSISIFGAARNTLW*PCCYLL
Trigger: CAGGAGGTAGCAGCATGGCCACCAGAGGGTGTTTCT...CGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACTGTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp CAATGCAGCTCACCACCTGGAACTTCTCCAGGTCCCAGAAGCGGATaGTCCTGTCGGAGCTGCCAGAAGCTAGGAGATATTCATTGGGGT +
Preference number: 2 (lower is better)
Translates to: QCSSPPGTSPGPRSG*SCRSCQKLGDIHWG
Trigger: ACCCCAATGAATATCTCCTAGCTTCTGGCAGCTCCGACAGGACAATCCGCTTCTGGGACCTGGAGAAGTTCCAGGTGGTGAGCTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp ACCTTGAAGAAACTTGAGTATCCAGGTAAAGCACATAGGGTGGCATaGCCCATCCCAAAGGAGCCCGCTCACTGCCTTTGCCCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: TLKKLEYPGKAHRVA*PIPKEPAHCLCPQV
Trigger: CACCTGGGGGCAAAGGCAGTGAGCGGGCTCCTTTGGGATGGGCAATGCCACCCTATGTGCTTTACCTGGATACTCAAGTTTCTTCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR TCA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCGCTCCCGTTGCTGGCTaGCCATGCAGACTCCACAAG +
Preference number: 2 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGAPVAG*PCRLHK
Trigger: CTTGTGGAGTCTGCATGGTCAGCCAGCAACGGGAGC...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR TCA 90 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGCTGTTCTCTACTAGTTaGGAAGACTTGAGGAACCAG +
Preference number: 2 (lower is better)
Translates to: ELSPQPRRWSAGWQPCLQLFSTS*EDLRNQ
Trigger: CTGGTTCCTCAAGTCTTCTCAACTAGTAGAGAACAG...CTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR TCA 90 bp AACACCAGCGAGACTCTGTACTCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGCCACAGACAGGTCATTaGTGGCCACTGCAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: NTSETLYSLRFAERVRSVPQTGH*WPLQSP
Trigger: TGGACTCTGCAGTGGCCATCAATGACCTGTCTGTGG...CACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTCGCTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp TTAATAAATCTGCCTGATAATTTACAGCAGCAGCCCCGAGGCTGGAGTTGCCCTGCAGGCTGGCAACCATaGCTCCAGGATGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LINLPDNLQQQPRGWSCPAGWQP*LQDGQQ
Trigger: CTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGC...AGGGCAACTCCAGCCTCGGGGCTGCTGCTGTAAATTATCAGGCAGATTTATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp GACTCTCAGGGATGCCACAAGTATAAAAGTAGTTTCCTGTGGCCTGTGAAAACCTCGTGCCTGGCACTCTaGTGGCCCCTGCTGGCCACA +
Preference number: 2 (lower is better)
Translates to: DSQGCHKYKSSFLWPVKTSCLAL*WPLLAT
Trigger: TGTGGCCAGCAGGGGCCAGCAGAGTGCCAGGCACGA...GGTTTTCACAGGCCACAGGAAACTACTTTTATACTTGTGGCATCCCTGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR GCA 90 bp AGGAGGTCCACTACCACAGACAGGTCATTGATGGCCACTGCAGAGTCCACTGATCTCCTTCACTGTGGCTaGATCATCTTCTGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: RRSTTTDRSLMATAESTDLLHCG*IIFWGC
Trigger: GCACCCCCAGAAGATGATGCAGCCACAGTGAAGGAG...ATCAGTGGACTCTGCAGTGGCCATCAATGACCTGTCTGTGGTAGTGGACCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp TGTGGACAGCGGGTAAGGTTTAGGGGGTACAGCACAGCAAGGTGCCAGGCTGTGGAGGAGACATTACTCTaGGAGAAAGCCACACCTATC +
Preference number: 2 (lower is better)
Translates to: CGQRVRFRGYSTARCQAVEETLL*EKATPI
Trigger: GATAGGTGTGGCTTTCTCCCAGAGTAATGTCTCCTC...CACAGCCTGGCACCTTGCTGTGCTGTACCCCCTAAACCTTACCCGCTGTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp ATGTTTAATTCCTGTCCCGTGACTTCTCAGGGCGGCAGGGTCATTAGTCCCCTCCCCAGCACATGCTCCTaGCTCCATGAGCCCATATAC +
Preference number: 2 (lower is better)
Translates to: MFNSCPVTSQGGRVISPLPSTCS*LHEPIY
Trigger: GTATATGGGCTCATGGAGCCAGGAGCATGTGCTGGG...GAGGGGACTAATGACCCTGCCGCCCTGAGAAGTCACGGGACAGGAATTAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp ATGTTTAATTCCTGTCCCGTGACTTCTCAGGGCGGCAGGGTCATTAGTCCCCTCCACATGGCTAGAGAGTaGTCCCCAGCACATGCTCCT +
Preference number: 2 (lower is better)
Translates to: MFNSCPVTSQGGRVISPLHMARE*SPAHAP
Trigger: AGGAGCATGTGCTGGGGACCACTCTCTAGCCATGTG...GAGGGGACTAATGACCCTGCCGCCCTGAGAAGTCACGGGACAGGAATTAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp GAGACTCTGTACTCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGGAGTTGGGCAGACCTCCTTCACTGTaGCTGCATCATCTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: ETLYSLRFAERVRSVELGRPPSL*LHHLLG
Trigger: CCCCAGAAGATGATGCAGCCACAGTGAAGGAGGTCT...GCCCAACTCCACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp AGATGCACAGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTGGGGCAGCGGCAACTGCACATCCATaGCTGGGCTGGGTTTTGAGA +
Preference number: 2 (lower is better)
Translates to: RCTVAILVKPSISIFGAAATAHP*LGWVLR
Trigger: TCTCAAAACCCAGCCCAGCCATGGATGTGCAGTTGC...CGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACTGTGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp TTGATATCTCCTGTAGTCCATACAGCTCGGACAGTGTCCAGGTTCTaGTGGCGGCTGGTGAGCACCACAAACATGGTGTCGTGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: LISPVVHTARTVSRF*WRLVSTTNMVSWPL
Trigger: CAAAGGCCACGACACCATGTTTGTGGTGCTCACCAGCCGCCACAAGAACCTGGACACTGTCCGAGCTGTATGGACTACAGGAGATATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 90 bp CGGCCACTCAAACCCGACTTGCTCTTGACGAGGCCACTGATGCTCTaGAGTTGTTTGAAGCAGAGTCGACACTTGTGCAACCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: RPLKPDLLLTRPLML*SCLKQSRHLCNLSS
Trigger: AGAGGAGAGGTTGCACAAGTGTCGACTCTGCTTCAAACAACTCAAGAGCATCAGTGGCCTCGTCAAGAGCAAGTCGGGTTTGAGTGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp AGGAGGTCCACTACCACAGACAGGTCATTGATGGCCACTGCAGAGTCCACTGATAGGCCTTTAAGCCAATaGGCTCATTCCGTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: RRSTTTDRSLMATAESTDRPLSQ*AHSVWQ
Trigger: CTGCCACACGGAATGAGCCCATTGGCTTAAAGGCCT...ATCAGTGGACTCTGCAGTGGCCATCAATGACCTGTCTGTGGTAGTGGACCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR TCA 90 bp TGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAGCGCCGCTCGCTCTCTaGGTTGTGCTTTACCCTCTG +
Preference number: 2 (lower is better)
Translates to: CLGEPADIPLIRKSGTVIAPLAL*VVLYPL
Trigger: CAGAGGGTAAAGCACAACTCAGAGAGCGAGCGGCGC...TATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp TGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATATCTGGGGCAGCACTGTaGTGCACAGGTCCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: CLGEPADIPLIRKSGTVISGAAL*CTGPAS
Trigger: GGAAGCTGGACCTGTGCACCACAGTGCTGCCCCAGA...TATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp GCAAGAGCATCTCTATCTACCCTCCTGAGGAGGGGAGCCCTCACAGGGCATGTAGCAGACTCTCAGGGATaGCACAAGTATAAAAGTAGT +
Preference number: 2 (lower is better)
Translates to: ARASLSTLLRRGALTGHVADSQG*HKYKSS
Trigger: ACTACTTTTATACTTGTGGCATCCCTGAGAGTCTGC...TACATGCCCTGTGAGGGCTCCCCTCCTCAGGAGGGTAGATAGAGATGCTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR GCA 90 bp AGATGCACAGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTGGGGCAGCGCATAGCTCTCATACTTaGTCTGCAGCAGTTTCTCGA +
Preference number: 2 (lower is better)
Translates to: RCTVAILVKPSISIFGAAHSSHT*SAAVSR
Trigger: TCGAGAAACTGCTGCAGAGCAAGTATGAGAGCTATG...CGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACTGTGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp AGGAGGTCCACTACCACAGACAGGTCATTGATGGCCACTGCAGAGTCCACTGATCTTAAGATAGACACATaGCTAGAGAGTGGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: RRSTTTDRSLMATAESTDLKIDT*LESGPQ
Trigger: CTGGGGACCACTCTCTAGCCATGTGTCTATCTTAAG...ATCAGTGGACTCTGCAGTGGCCATCAATGACCTGTCTGTGGTAGTGGACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR GCA 90 bp TGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATATTTGGCACCGGCAACTaGGGCAACTGCACATCCATG +
Preference number: 2 (lower is better)
Translates to: CLGEPADIPLIRKSGTVIFGTGN*GNCTSM
Trigger: CATGGATGTGCAGTTGCCGCAGTTGCCGGTGCCAAA...TATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CCA 90 bp AGATGCACAGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTGGGGCAGCGCTAGGAGATATTCATTaGGGTGAAACTCCACCACAT +
Preference number: 2 (lower is better)
Translates to: RCTVAILVKPSISIFGAALGDIH*GETPPH
Trigger: ATGTGGTGGAGTTTCACCCCAATGAATATCTCCTAG...CGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACTGTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CCGCCCGGGACTCTCGCTCGTCCCTGTCATCTTCGCTaGTGGGGCTGCGCCGCTCGCTCTCTGAGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: PPGTLARPCHLR*WGCAARSLSCA
Trigger: AGCACAACTCAGAGAGCGAGCGGCGCAGCCCCAGCAGCGAAGATGACAGGGACGAGCGAGAGTCCCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTaGTGGCCCCTGCTGGCCACAGATGGAGGCTGCACT +
Preference number: 3 (lower is better)
Translates to: LTRQPLASCLAL*WPLLATDGGCT
Trigger: AGTGCAGCCTCCATCTGTGGCCAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR CCA 72 bp CCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCCTGCTaGCCACAGATGGAGGCTGCACTGGGCCTGGAGTAC +
Preference number: 3 (lower is better)
Translates to: PLLRAWHSAGPC*PQMEAALGLEY
Trigger: GTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR CCA 72 bp CTGTGGAGTTGGGCCCTGGGTCCCGCCGCACAGAGCTaGGTTCCTGGTCAAGCCAGGAGCACCTGGAGGTAC +
Preference number: 3 (lower is better)
Translates to: LWSWALGPAAQS*VPGQARSTWRY
Trigger: GTACCTCCAGGTGCTCCTGGCTTGACCAGGAACCCAGCTCTGTGCGGCGGGACCCAGGGCCCAACTCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp CTGCTGGCCCCTGCTGGCCACAGATGGAGGCTGCACTaGGCCTGGAGTACGACAGTCTCTGCTTCCAGCGAC +
Preference number: 3 (lower is better)
Translates to: LLAPAGHRWRLH*AWSTTVSASSD
Trigger: GTCGCTGGAAGCAGAGACTGTCGTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGCAGGGGCCAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR TCA 72 bp CCGGGGTGGTGTCCGACCTGCCAAGGCAAAGGGGGCTaGCACTTGGGTTCCCATGTGCTCTCTGGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: PGWCPTCQGKGG*HLGSHVLSGKR
Trigger: CCTCTTCCCAGAGAGCACATGGGAACCCAAGTGTCAGCCCCCTTTGCCTTGGCAGGTCGGACACCACCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp AGCGTGTGGGCAAGTCGGGGGCTGAGGGCAACCGCCTaGGAGAGGCACAGCACATCAACAGGTCACTATCCG +
Preference number: 3 (lower is better)
Translates to: SVWASRGLRATA*ERHSTSTGHYP
Trigger: CGGATAGTGACCTGTTGATGTGCTGTGCCTCTCGCAGGCGGTTGCCCTCAGCCCCCGACTTGCCCACACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTaGCAACCATGCCTCCAGGATGGCCAGCAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: ELSPQPRRWSAG*QPCLQDGQQGR
Trigger: CCTGCCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR CCA 72 bp GCTGCCGGAGAGGAGCTTAGTCCACAACCGAGGAGGTaGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGC +
Preference number: 3 (lower is better)
Translates to: AAGEELSPQPRR*SAGWQPCLQDG
Trigger: GCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTCCTCTCCGGCAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
3UTR CCA 72 bp CCCGGGACTCTCGCTCGTCCCTGTCATCTTCGCTGCTaGGGCTGCGCCGCTCGCTCTCTGAGTTGTGCTTTA +
Preference number: 3 (lower is better)
Translates to: PGTLARPCHLRC*GCAARSLSCAL
Trigger: TAAAGCACAACTCAGAGAGCGAGCGGCGCAGCCCCAGCAGCGAAGATGACAGGGACGAGCGAGAGTCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp GACCTCCTTCACTGTGGCTGCATCATCTTCTGGGGGTaGTGGGAAGGGCTCACTTCTCCGGGGTGGTGTCCG +
Preference number: 3 (lower is better)
Translates to: DLLHCGCIIFWG*WEGLTSPGWCP
Trigger: CGGACACCACCCCGGAGAAGTGAGCCCTTCCCAGCACCCCCAGAAGATGATGCAGCCACAGTGAAGGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CCGTGTGCTCCTCAGTCCAAACTGGCCATGAGTAGGTaGAGCTCACGGAAGGCACTGCCATGGCGGCCACTC +
Preference number: 3 (lower is better)
Translates to: PCAPQSKLAMSR*SSRKALPWRPL
Trigger: GAGTGGCCGCCATGGCAGTGCCTTCCGTGAGCTGCACCTACTCATGGCCAGTTTGGACTGAGGAGCACACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CAACAGGTCACTATCCGCCCTGGGGGACGTCATTGCTaGCCTGCGTTCTCGACAAGGCCATGTGCCCTTCCG +
Preference number: 3 (lower is better)
Translates to: QQVTIRPGGRHC*PAFSTRPCALP
Trigger: CGGAAGGGCACATGGCCTTGTCGAGAACGCAGGGCAGCAATGACGTCCCCCAGGGCGGATAGTGACCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp TGTACTCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTaGAGTTGGGCCCTGGGTCCCGCCGCACAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: CTPSDLLRGFAL*SWALGPAAQSW
Trigger: CCAGCTCTGTGCGGCGGGACCCAGGGCCCAACTCCACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CAA 90 bp CCTCTGAGGCTTGCTGCATGTCGTGCTGGGCCGCTCATAGATGCGGCGGAGGGAGCCACCTTGCCCCAGTaGACAAGGACCACATCAAAG +
Preference number: 3 (lower is better)
Translates to: PLRLAACRAGPLIDAAEGATLPQ*TRTTSK
Trigger: CTTTGATGTGGTCCTTGTCAACTGGGGCAAGGTGGC...TCCCTCCGCCGCATCTATGAGCGGCCCAGCACGACATGCAGCAAGCCTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp TGCTCCCACCGTGTGCTCCTCAGTCCAAACTGGCCATaGGTAGGTGCAGCTCACGGAAGGCACTGCCATGGC +
Preference number: 3 (lower is better)
Translates to: CSHRVLLSPNWP*VGAAHGRHCHG
Trigger: GCCATGGCAGTGCCTTCCGTGAGCTGCACCTACTCATGGCCAGTTTGGACTGAGGAGCACACGGTGGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp TTCCTCCCCATGTTCACTGCCCACAGTGGGCTCCCCTaGCCAGAAACACCCTCTGGTGGCCATGCTGCTACC +
Preference number: 3 (lower is better)
Translates to: FLPMFTAHSGLP*PETPSGGHAAT
Trigger: GGTAGCAGCATGGCCACCAGAGGGTGTTTCTGGTCAGGGGAGCCCACTGTGGGCAGTGAACATGGGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp GGGTTAGGGGTCTGTTGTGTCAGAGGCTGGTTAGCCTaGACAGGGTCCTGGGTCACAGTTCCCGTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: GLGVCCVRGWLA*TGSWVTVPVLV
Trigger: CACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCTGACACAACAGACCCCTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp ACTCTCGCTCGTCCCTGTCATCTTCGCTGCTGGGGCTaGGCCGCTCGCTCTCTGAGTTGTGCTTTACCCTCT +
Preference number: 3 (lower is better)
Translates to: TLARPCHLRCWG*AARSLSCALPS
Trigger: AGAGGGTAAAGCACAACTCAGAGAGCGAGCGGCGCAGCCCCAGCAGCGAAGATGACAGGGACGAGCGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CAGCGGGTAAGGTTTAGGGGGTACAGCACAGCAAGGTaGCAGGCTGTGAGGTGGGAGGGGTGTGGTCTCACT +
Preference number: 3 (lower is better)
Translates to: QRVRFRGYSTAR*QAVRWEGCGLT
Trigger: AGTGAGACCACACCCCTCCCACCTCACAGCCTGGCACCTTGCTGTGCTGTACCCCCTAAACCTTACCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp GGGACCTCGAGATTTGGCACCGGCAACTGCGGCAACTaGACATCCATGGCTGGGCTGGGTTTTGAGACCTCC +
Preference number: 3 (lower is better)
Translates to: GTSRFGTGNCGN*TSMAGLGFETS
Trigger: GGAGGTCTCAAAACCCAGCCCAGCCATGGATGTGCAGTTGCCGCAGTTGCCGGTGCCAAATCTCGAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp GGTCGTGCTGGGACCTCGAGATTTGGCACCGGCAACTaGGGCAACTGCACATCCATGGCTGGGCTGGGTTTT +
Preference number: 3 (lower is better)
Translates to: GRAGTSRFGTGN*GNCTSMAGLGF
Trigger: AAAACCCAGCCCAGCCATGGATGTGCAGTTGCCGCAGTTGCCGGTGCCAAATCTCGAGGTCCCAGCACGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CACGCTCTGCTCATCGTGACAGTGAGAGGTGTGGATTaGAGCACAGGCCTCCGCACCACGGGTGAGAGATGC +
Preference number: 3 (lower is better)
Translates to: HALLIVTVRGVD*STGLRTTGERC
Trigger: GCATCTCTCACCCGTGGTGCGGAGGCCTGTGCTGCAATCCACACCTCTCACTGTCACGATGAGCAGAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp TGTGCTTTACCCTCTGAGGCTTGCTGCATGTCGTGCTaGGCCGCTCATAGATGCGGCGGAGGGAGACACCAG +
Preference number: 3 (lower is better)
Translates to: CALPSEACCMSC*AAHRCGGGRHQ
Trigger: CTGGTGTCTCCCTCCGCCGCATCTATGAGCGGCCCAGCACGACATGCAGCAAGCCTCAGAGGGTAAAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp GAGCTGGGCAGAAGGTTGGCAGGAGCCACCAGCAAGTaGTGCCGCCTCTGCTACAGGTGTCCAGCTAGGTTT +
Preference number: 3 (lower is better)
Translates to: ELGRRLAGATSK*CRLCYRCPARF
Trigger: AAACCTAGCTGGACACCTGTAGCAGAGGCGGCACCACTTGCTGGTGGCTCCTGCCAACCTTCTGCCCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp GGTGTCCGACCTGCCAAGGCAAAGGGGGCTGACACTTaGGTTCCCATGTGCTCTCTGGGAAGAGGCCCTGTA +
Preference number: 3 (lower is better)
Translates to: GVRPAKAKGADT*VPMCSLGRGPV
Trigger: TACAGGGCCTCTTCCCAGAGAGCACATGGGAACCCAAGTGTCAGCCCCCTTTGCCTTGGCAGGTCGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CAA 90 bp CTCTGTCCCCTAGGTGTCCCCAGTGGAGAAGAACACCAGCGAGACTCTGTACTCGGTCCCAGAAGCGGATaGTCCTGTCGGAGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: LCPLGVPSGEEHQRDSVLGPRSG*SCRSCQ
Trigger: CTGGCAGCTCCGACAGGACAATCCGCTTCTGGGACC...GAGTACAGAGTCTCGCTGGTGTTCTTCTCCACTGGGGACACCTAGGGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp GTCATCTTCGCTGCTGGGGCTGCGCCGCTCGCTCTCTaGGTTGTGCTTTACCCTCTGAGGCTTGCTGCATGT +
Preference number: 3 (lower is better)
Translates to: VIFAAGAAPLAL*VVLYPLRLAAC
Trigger: ACATGCAGCAAGCCTCAGAGGGTAAAGCACAACTCAGAGAGCGAGCGGCGCAGCCCCAGCAGCGAAGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp AGGTTCACCCTTGGGTGCAGGAGTGGAAGTCATGACTaGCGGTCGTGCTGGGACCTCGAGATTTGGCACCGG +
Preference number: 3 (lower is better)
Translates to: RFTLGCRSGSHD*RSCWDLEIWHR
Trigger: CCGGTGCCAAATCTCGAGGTCCCAGCACGACCGTCAGTCATGACTTCCACTCCTGCACCCAAGGGTGAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CGTCAGATCCCAAAGCTTCACTGTGTGGTCATCTGCTaGCGACGCCAGCCACTTCCCATCAGGGCTGAACCG +
Preference number: 3 (lower is better)
Translates to: RQIPKLHCVVIC*RRQPLPIRAEP
Trigger: CGGTTCAGCCCTGATGGGAAGTGGCTGGCGTCGGCAGCAGATGACCACACAGTGAAGCTTTGGGATCTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp AGTTGTGCTTTACCCTCTGAGGCTTGCTGCATGTCGTaGTGGGCCGCTCATAGATGCGGCGGAGGGAGACAC +
Preference number: 3 (lower is better)
Translates to: SCALPSEACCMS*WAAHRCGGGRH
Trigger: GTGTCTCCCTCCGCCGCATCTATGAGCGGCCCAGCACGACATGCAGCAAGCCTCAGAGGGTAAAGCACAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CGCTCTCTGAGTTGTGCTTTACCCTCTGAGGCTTGCTaGATGTCGTGCTGGGCCGCTCATAGATGCGGCGGA +
Preference number: 3 (lower is better)
Translates to: RSLSCALPSEAC*MSCWAAHRCGG
Trigger: TCCGCCGCATCTATGAGCGGCCCAGCACGACATGCAGCAAGCCTCAGAGGGTAAAGCACAACTCAGAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CATCAACAGGTCACTATCCGCCCTGGGGGACGTCATTaGTGCCCTGCGTTCTCGACAAGGCCATGTGCCCTT +
Preference number: 3 (lower is better)
Translates to: HQQVTIRPGGRH*CPAFSTRPCAL
Trigger: AAGGGCACATGGCCTTGTCGAGAACGCAGGGCAGCAATGACGTCCCCCAGGGCGGATAGTGACCTGTTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp TGTTGTGTCAGAGGCTGGTTAGCCTGCACAGGGTCCTaGGTCACAGTTCCCGTCCTGGTGACTCTCGTCAGG +
Preference number: 3 (lower is better)
Translates to: CCVRGWLACTGS*VTVPVLVTLVR
Trigger: CCTGACGAGAGTCACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCTGACACAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp GAGACACCAGGGTTAGGGGTCTGTTGTGTCAGAGGCTaGTTAGCCTGCACAGGGTCCTGGGTCACAGTTCCC +
Preference number: 3 (lower is better)
Translates to: ETPGLGVCCVRG*LACTGSWVTVP
Trigger: GGGAACTGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCTGACACAACAGACCCCTAACCCTGGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp CCATGGCTGGGCTGGGTTTTGAGACCTCCTTCACTGTaGCTGCATCATCTTCTGGGGGTGCTGGGAAGGGCT +
Preference number: 3 (lower is better)
Translates to: PWLGWVLRPPSL*LHHLLGVLGRA
Trigger: AGCCCTTCCCAGCACCCCCAGAAGATGATGCAGCCACAGTGAAGGAGGTCTCAAAACCCAGCCCAGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp AGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTaGGGCAGCGCTGACCCACCCTCTGCTCTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: SGHSGQALHQYL*GSADPPSALPA
Trigger: TGCAGGCAGAGCAGAGGGTGGGTCAGCGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CAA 90 bp AGATGCACAGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTGGGGCAGCGCTGGGACCTCGAGATTaGGCACCGGCAACTGCGGCA +
Preference number: 3 (lower is better)
Translates to: RCTVAILVKPSISIFGAALGPRD*APATAA
Trigger: TGCCGCAGTTGCCGGTGCCAAATCTCGAGGTCCCAG...CGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACTGTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp CTATGGCCTCACCTGTTCCATTTCCCCAAGTCAAGCTaGCCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCT +
Preference number: 3 (lower is better)
Translates to: LWPHLFHFPKSS*PGSPLLRAWHS
Trigger: AGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGCTTGACTTGGGGAAATGGAACAGGTGAGGCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 72 bp GGCCAGTGTGGAAGGGCTGGGTTCTGTTCATCTGCCTaGCACCAGGCACTCTCCCTGCCCACTGATTCTCAA +
Preference number: 3 (lower is better)
Translates to: GQCGRAGFCSSA*HQALSLPTDSQ
Trigger: TTGAGAATCAGTGGGCAGGGAGAGTGCCTGGTGTCAGGCAGATGAACAGAACCCAGCCCTTCCACACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 72 bp CATTGCAGATGGCCAGGTCAGCCACCTTGCCCCAGTTaGCAAGGACCACATCAAAGCAGCGCTCAGGTTCCC +
Preference number: 3 (lower is better)
Translates to: HCRWPGQPPCPS*QGPHQSSAQVP
Trigger: GGGAACCTGAGCGCTGCTTTGATGTGGTCCTTGTCAACTGGGGCAAGGTGGCTGACCTGGCCATCTGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp CCTGCACAGGGTCCTGGGTCACAGTTCCCGTCCTGGTaGCTCTCGTCAGGTCCACCACATAAGAGGAGACAT +
Preference number: 3 (lower is better)
Translates to: PAQGPGSQFPSW*LSSGPPHKRRH
Trigger: ATGTCTCCTCTTATGTGGTGGACCTGACGAGAGTCACCAGGACGGGAACTGTGACCCAGGACCCTGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp CAGCTCGGACAGTGTCCAGGTTCTTGTGGCGGCTGGTaGGCACCACAAACATGGTGTCGTGGCCTTTGCGTA +
Preference number: 3 (lower is better)
Translates to: QLGQCPGSCGGW*APQTWCRGLCV
Trigger: TACGCAAAGGCCACGACACCATGTTTGTGGTGCTCACCAGCCGCCACAAGAACCTGGACACTGTCCGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp GAACACCAGCGAGACTCTGTACTCCCTCAGATTTGCTaGGAGGGTTCGCTCTGTGGAGTTGGGCCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: EHQRDSVLPQIC*EGSLCGVGPWV
Trigger: GACCCAGGGCCCAACTCCACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTCGCTGGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp TCAGTGGTGACAGCAAGACCCTTATGGTGGTACAGGTaGGGGCCTGAGGTTCAGCAAGAGCCTCCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: SVVTARPLWWYR*GPEVQQEPPQA
Trigger: AGCCTGGGGAGGCTCTTGCTGAACCTCAGGCCCTCACCTGTACCACCATAAGGGTCTTGCTGTCACCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp TTGGCTACAACAACCGCACCACCGAGTTCACCAACCTaGACGAACACAGCTCCCGCTCCCACGCTCTGCTCA +
Preference number: 3 (lower is better)
Translates to: LATTTAPPSSPT*TNTAPAPTLCS
Trigger: TGAGCAGAGCGTGGGAGCGGGAGCTGTGTTCGTTCAGGTTGGTGAACTCGGTGGTGCGGTTGTTGTAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp AGCCGTCAGATCCCAAAGCTTCACTGTGTGGTCATCTaGTGCCGACGCCAGCCACTTCCCATCAGGGCTGAA +
Preference number: 3 (lower is better)
Translates to: SRQIPKLHCVVI*CRRQPLPIRAE
Trigger: TTCAGCCCTGATGGGAAGTGGCTGGCGTCGGCAGCAGATGACCACACAGTGAAGCTTTGGGATCTGACGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp GCTCCTGGCTCCATGAGCCCATATACACCTATAGCCTaGTTAGAGCTGGGCAGAAGGTTGGCAGGAGCCACC +
Preference number: 3 (lower is better)
Translates to: APGSMSPYTPIA*LELGRRLAGAT
Trigger: GGTGGCTCCTGCCAACCTTCTGCCCAGCTCTAAGCAGGCTATAGGTGTATATGGGCTCATGGAGCCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp AGCACCACAAACATGGTGTCGTGGCCTTTGCGTATCTaGGACATGGCATCCTCGTCCACCAGCTCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: STTNMVSWPLRI*DMASSSTSSAC
Trigger: GCAGGCAGAGCTGGTGGACGAGGATGCCATGTCGCAGATACGCAAAGGCCACGACACCATGTTTGTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp GGGAGGTGCACCCGGTCTGGACATAGCTCTCATACTTaGTCTGCAGCAGTTTCTCGATCTGGGGCAGCACTG +
Preference number: 3 (lower is better)
Translates to: GRCTRSGHSSHT*SAAVSRSGAAL
Trigger: CAGTGCTGCCCCAGATCGAGAAACTGCTGCAGAGCAAGTATGAGAGCTATGTCCAGACCGGGTGCACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp GGCATACAGCAAGTATGTATGTGTGAGGGCTGCGGGTaGTCCCACCGTGTGCTCCTCAGTCCAAACTGGCCA +
Preference number: 3 (lower is better)
Translates to: GIQQVCMCEGCG*SHRVLLSPNWP
Trigger: TGGCCAGTTTGGACTGAGGAGCACACGGTGGGAGCACCCGCAGCCCTCACACATACATACTTGCTGTATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp ATGTATGCGTTTGTATCTGGTCCCCGGTCCCAGCCCTaGAGAACAGGGCTTGCTAGGGCTCCTCCCTTCTTG +
Preference number: 3 (lower is better)
Translates to: MYAFVSGPRSQP*RTGLARAPPFL
Trigger: CAAGAAGGGAGGAGCCCTAGCAAGCCCTGTTCTCCAGGGCTGGGACCGGGGACCAGATACAAACGCATACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CCA 72 bp GATTTGGCACCGGCAACTGCGGCAACTGCACATCCATaGCTGGGCTGGGTTTTGAGACCTCCTTCACTGTGG +
Preference number: 3 (lower is better)
Translates to: DLAPATAATAHP*LGWVLRPPSLW
Trigger: CCACAGTGAAGGAGGTCTCAAAACCCAGCCCAGCCATGGATGTGCAGTTGCCGCAGTTGCCGGTGCCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp TTGTGGCGGCTGGTGAGCACCACAAACATGGTGTCGTaGCCTTTGCGTATCTGCGACATGGCATCCTCGTCC +
Preference number: 3 (lower is better)
Translates to: LWRLVSTTNMVS*PLRICDMASSS
Trigger: GGACGAGGATGCCATGTCGCAGATACGCAAAGGCCACGACACCATGTTTGTGGTGCTCACCAGCCGCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp AGTACACAAGTTCCTCCCCATGTTCACTGCCCACAGTaGGCTCCCCTGACCAGAAACACCCTCTGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: STQVPPHVHCPQ*APLTRNTLWWP
Trigger: TGGCCACCAGAGGGTGTTTCTGGTCAGGGGAGCCCACTGTGGGCAGTGAACATGGGGAGGAACTTGTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CAA 90 bp TCTCCTCCTCCTCGAGGCCACTTACGCTTTCTGATTGACAATGTTCAGGAGGTCCAGCAGCCGTCGGGGTaGAAGAGGACACTCCTGACG +
Preference number: 3 (lower is better)
Translates to: SPPPRGHLRFLIDNVQEVQQPSG*KRTLLT
Trigger: CGTCAGGAGTGTCCTCTTCAACCCCGACGGCTGCTG...GACCTCCTGAACATTGTCAATCAGAAAGCGTAAGTGGCCTCGAGGAGGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CAA 90 bp GCACATCCATGGCTGGGCTGGGTTTTGAGACCTCCTTCACTGTGGCTGCATCATCCTATCAGCTGGTCATaGCAGATGGCCAGGTCAGCC +
Preference number: 3 (lower is better)
Translates to: AHPWLGWVLRPPSLWLHHPISWS*QMARSA
Trigger: GGCTGACCTGGCCATCTGCAATGACCAGCTGATAGG...ATGATGCAGCCACAGTGAAGGAGGTCTCAAAACCCAGCCCAGCCATGGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp TGTCAGGTTCACCCTTGGGTGCAGGAGTGGAAGTCATaGCTGACGGTCGTGCTGGGACCTCGAGATTTGGCA +
Preference number: 3 (lower is better)
Translates to: CQVHPWVQEWKS*LTVVLGPRDLA
Trigger: TGCCAAATCTCGAGGTCCCAGCACGACCGTCAGTCATGACTTCCACTCCTGCACCCAAGGGTGAACCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp AAAGGAGCCCGCTCACTGCCTTTGCCCCCAGGTGTTTaGGTTTGGCTACAACAACCGCACCACCGAGTTCAC +
Preference number: 3 (lower is better)
Translates to: KGARSLPLPPGV*VWLQQPHHRVH
Trigger: GTGAACTCGGTGGTGCGGTTGTTGTAGCCAAACTCAAACACCTGGGGGCAAAGGCAGTGAGCGGGCTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp CAGGCCCTGTATGACCCGGGAACTCGGACATCATCTTaGCAGCCGTCAGATCCCAAAGCTTCACTGTGTGGT +
Preference number: 3 (lower is better)
Translates to: QALYDPGTRTSS*QPSDPKASLCG
Trigger: ACCACACAGTGAAGCTTTGGGATCTGACGGCTGGCAAGATGATGTCCGAGTTCCCGGGTCATACAGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp ACGTCATTGCTGCCCTGCGTTCTCGACAAGGCCATGTaGCCTTCCGCAATTCCAAACTCACCTACCTGCTGC +
Preference number: 3 (lower is better)
Translates to: TSLLPCVLDKAM*PSAIPNSPTCC
Trigger: GCAGCAGGTAGGTGAGTTTGGAATTGCGGAAGGGCACATGGCCTTGTCGAGAACGCAGGGCAGCAATGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp CCTCACCCTGTCAGAGGTCTGGGCTATATTTATGGCTaGCAGAGGCCAGTGTGGAAGGGCTGGGTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: PHPVRGLGYIYG*QRPVWKGWVLF
Trigger: GAACAGAACCCAGCCCTTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGGGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CCA 72 bp ATCTTGCCAGCCGTCAGATCCCAAAGCTTCACTGTGTaGTCATCTGCTGCCGACGCCAGCCACTTCCCATCA +
Preference number: 3 (lower is better)
Translates to: ILPAVRSQSFTV*SSAADASHFPS
Trigger: TGATGGGAAGTGGCTGGCGTCGGCAGCAGATGACCACACAGTGAAGCTTTGGGATCTGACGGCTGGCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp GTAGTCCATACAGCTCGGACAGTGTCCAGGTTCTTGTaGCGGCTGGTGAGCACCACAAACATGGTGTCGTGG +
Preference number: 3 (lower is better)
Translates to: VVHTARTVSRFL*RLVSTTNMVSW
Trigger: CCACGACACCATGTTTGTGGTGCTCACCAGCCGCCACAAGAACCTGGACACTGTCCGAGCTGTATGGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp GGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTaGAAGGGCTGGGTTCTGTTCATCTGCCTGACACCA +
Preference number: 3 (lower is better)
Translates to: GLGYIYGWQRPV*KGWVLFICLTP
Trigger: TGGTGTCAGGCAGATGAACAGAACCCAGCCCTTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CCA 72 bp GGCCCTGTATGTGGCTCAGGTCTTAAGATAGACACATaGCTAGAGAGTGGTCCCCAGCACATGCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: GPVCGSGLKIDT*LESGPQHMLLA
Trigger: AGCCAGGAGCATGTGCTGGGGACCACTCTCTAGCCATGTGTCTATCTTAAGACCTGAGCCACATACAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp CAAAGGGGGCTGACACTTGGGTTCCCATGTGCTCTCTaGGAAGAGGCCCTGTATGTGGCTCAGGTCTTAAGA +
Preference number: 3 (lower is better)
Translates to: QRGLTLGFPCAL*EEALYVAQVLR
Trigger: TCTTAAGACCTGAGCCACATACAGGGCCTCTTCCCAGAGAGCACATGGGAACCCAAGTGTCAGCCCCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR-3UTR CAA 90 bp ATGTTTAATTCCTGTCCCGTGACTTCTCAGGGCGGCAGGGTCATTAGTCCCCTCATGGTGTCGTGGCCTTaGCGTATCTGCGACATGGCA +
Preference number: 3 (lower is better)
Translates to: MFNSCPVTSQGGRVISPLMVSWP*RICDMA
Trigger: TGCCATGTCGCAGATACGCAAAGGCCACGACACCAT...GAGGGGACTAATGACCCTGCCGCCCTGAGAAGTCACGGGACAGGAATTAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp GTGGGCATTGTGTACCCTGTTGCTCCCGTTGCTGGCTaGCCATGCAGACTCCACAAGTTGTCACTGAAGACA +
Preference number: 3 (lower is better)
Translates to: VGIVYPVAPVAG*PCRLHKLSLKT
Trigger: TGTCTTCAGTGACAACTTGTGGAGTCTGCATGGTCAGCCAGCAACGGGAGCAACAGGGTACACAATGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 72 bp GATGAACAAACACTGTTCCATTTCCCCAAGTCAAGCTaGCCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCT +
Preference number: 3 (lower is better)
Translates to: DEQTLFHFPKSS*PGSPLLRAWHS
Trigger: AGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGCTTGACTTGGGGAAATGGAACAGTGTTTGTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp GGAGACCTGACTGCTGAGATTAAGGGTGTATGCCCGTaGCCCCTTCAGCCATCTTTGTCTTGGAGACCAGCA +
Preference number: 3 (lower is better)
Translates to: GDLTAEIKGVCP*PLQPSLSWRPA
Trigger: TGCTGGTCTCCAAGACAAAGATGGCTGAAGGGGTCACGGGCATACACCCTTAATCTCAGCAGTCAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp AACTTGAGTATCCAGGTAAAGCACATAGGGTGGCATTaGCCATCCCAAAGGAGCCCGCTCACTGCCTTTGCC +
Preference number: 3 (lower is better)
Translates to: NLSIQVKHIGWH*PSQRSPLTAFA
Trigger: GGCAAAGGCAGTGAGCGGGCTCCTTTGGGATGGGCAATGCCACCCTATGTGCTTTACCTGGATACTCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp TCCAAGGTCATGCAACCATCGTGGTCTAGTCTCTGGTaGCATCCAGAGGTCAGAGGGAGAGTTATGACAGGC +
Preference number: 3 (lower is better)
Translates to: SKVMQPSWSSLW*HPEVRGRVMTG
Trigger: GCCTGTCATAACTCTCCCTCTGACCTCTGGATGCCACCAGAGACTAGACCACGATGGTTGCATGACCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CCA 72 bp TATATTTATGGCTGGCAGAGGCCAGTGTGGAAGGGCTaGGTTCTGTTCATCTGCCTGACACCAGGCACTCTC +
Preference number: 3 (lower is better)
Translates to: YIYGWQRPVWKG*VLFICLTPGTL
Trigger: GAGAGTGCCTGGTGTCAGGCAGATGAACAGAACCCAGCCCTTCCACACTGGCCTCTGCCAGCCATAAATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 72 bp CCCATTCTCCTCCTCCTCGAGGCCACTTACGCTTTCTaGTTGACAATGTTCAGGAGGTCCACTACCACAGAC +
Preference number: 3 (lower is better)
Translates to: PILLLLEATYAF*LTMFRRSTTTD
Trigger: GTCTGTGGTAGTGGACCTCCTGAACATTGTCAATCAGAAAGCGTAAGTGGCCTCGAGGAGGAGGAGAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp GGTTCTGTTCATCTGCCTGACACCAGGCACTCTCCCTaGCCACTGATTCTCAACATGTTCCTCTCCCCAAAT +
Preference number: 3 (lower is better)
Translates to: GSVHLPDTRHSP*PLILNMFLSPN
Trigger: ATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAGTGCCTGGTGTCAGGCAGATGAACAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CCA 72 bp ACCACTCTAGAATCTTCCAAGGTCATGCAACCATCGTaGTCTAGTCTCTGGTGGCATCCAGAGGTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: TTLESSKVMQPS*SSLWWHPEVRG
Trigger: CCCTCTGACCTCTGGATGCCACCAGAGACTAGACCACGATGGTTGCATGACCTTGGAAGATTCTAGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CCA 72 bp TCCTCCCTTCTTGCTGGCTGCATCAACAGGCTGTTCTaGAGCGCAGACTCTCAGGGATGCCACAAGTATAAA +
Preference number: 3 (lower is better)
Translates to: SSLLAGCINRLF*SADSQGCHKYK
Trigger: TTTATACTTGTGGCATCCCTGAGAGTCTGCGCTCCAGAACAGCCTGTTGATGCAGCCAGCAAGAAGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR CAA 90 bp TATATCATTTCTAGCACCTTGCGGGCCCCTATAACCATTCCATCCCATTGCAGTCCTGGAGAACAGGGCTaGCTAGGGCTCCTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: YIISSTLRAPITIPSHCSPGEQG*LGLLPS
Trigger: AGAAGGGAGGAGCCCTAGCAAGCCCTGTTCTCCAGG...ACTGCAATGGGATGGAATGGTTATAGGGGCCCGCAAGGTGCTAGAAATGATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR-3UTR CAA 90 bp GAGACTCTGTACTCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGGAGTTGGGCCGTGCTTCTGCTTTCTaGAGACGGTCTCACTATGTA +
Preference number: 3 (lower is better)
Translates to: ETLYSLRFAERVRSVELGRASAF*RRSHYV
Trigger: TACATAGTGAGACCGTCTCAAGAAAGCAGAAGCACG...GCCCAACTCCACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp GTCTCTGGTGGCATCCAGAGGTCAGAGGGAGAGTTATaGCAGGCTCTTAGCCAATCTACCCAAGGACAATTG +
Preference number: 3 (lower is better)
Translates to: VSGGIQRSEGEL*QALSQSTQGQL
Trigger: CAATTGTCCTTGGGTAGATTGGCTAAGAGCCTGTCATAACTCTCCCTCTGACCTCTGGATGCCACCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 72 bp CTAGGAGATATTCATTGGGGTGAAACTCCACCACATTaGCAGGCCCTGTATGACCCGGGAACTCGGACATCA +
Preference number: 3 (lower is better)
Translates to: LGDIHWGETPPH*QALYDPGTRTS
Trigger: TGATGTCCGAGTTCCCGGGTCATACAGGGCCTGTCAATGTGGTGGAGTTTCACCCCAATGAATATCTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp TTCTCCTCCTCCTCGAGGCCACTTACGCTTTCTGATTaGCAATGTTCAGGAGGTCCACTACCACAGACAGGT +
Preference number: 3 (lower is better)
Translates to: FSSSSRPLTLSD*QCSGGPLPQTG
Trigger: ACCTGTCTGTGGTAGTGGACCTCCTGAACATTGTCAATCAGAAAGCGTAAGTGGCCTCGAGGAGGAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp ACTTGGACAGAGGCAGGTGGATCTCTGCCAGATCAGTaGGTTCTACATAGTGAGTTCCAGGCCAGACAAGAC +
Preference number: 3 (lower is better)
Translates to: TWTEAGGSLPDQ*VLHSEFQARQD
Trigger: GTCTTGTCTGGCCTGGAACTCACTATGTAGAACTCACTGATCTGGCAGAGATCCACCTGCCTCTGTCCAAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp ATGCTCTTGAGTTGTTTGAAGCAGAGTCGACACTTGTaGAACCTCTCCTCTCGGCTGATGTCCACACCCACA +
Preference number: 3 (lower is better)
Translates to: MLLSCLKQSRHL*NLSSRLMSTPT
Trigger: TGTGGGTGTGGACATCAGCCGAGAGGAGAGGTTGCACAAGTGTCGACTCTGCTTCAAACAACTCAAGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp TCTTCCAAGGTCATGCAACCATCGTGGTCTAGTCTCTaGTGGCATCCAGAGGTCAGAGGGAGAGTTATGACA +
Preference number: 3 (lower is better)
Translates to: SSKVMQPSWSSL*WHPEVRGRVMT
Trigger: TGTCATAACTCTCCCTCTGACCTCTGGATGCCACCAGAGACTAGACCACGATGGTTGCATGACCTTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CCA 72 bp AAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATaGAGAGTGGGCATTGTGTACCCTGTTGCTCCCGTT +
Preference number: 3 (lower is better)
Translates to: KCNLNRQYWETL*RVGIVYPVAPV
Trigger: AACGGGAGCAACAGGGTACACAATGCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR TCA 72 bp CACAGACAGGTCATTGATGGCCACTGCAGAGTCCACTaGTGTCTTGATATCTCCTGTAGTCCATACAGCTCG +
Preference number: 3 (lower is better)
Translates to: HRQVIDGHCRVH*CLDISCSPYSS
Trigger: CGAGCTGTATGGACTACAGGAGATATCAAGACATCAGTGGACTCTGCAGTGGCCATCAATGACCTGTCTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp ATCCCAGTATTTGAGAGGCAAAGGCAGGCAGATCTCTaGGCTAGAGGGCAGCTTGGTATACACACTATGACC +
Preference number: 3 (lower is better)
Translates to: IPVFERQRQADL*ARGQLGIHTMT
Trigger: GGTCATAGTGTGTATACCAAGCTGCCCTCTAGCTCAGAGATCTGCCTGCCTTTGCCTCTCAAATACTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR GCA 72 bp ATCAACAGGCTGTTCTGGAGCGCAGACTCTCAGGGATaGCACAAGTATAAAAGTAGTTTCCTGTGGCCTGTG +
Preference number: 3 (lower is better)
Translates to: INRLFWSADSQG*HKYKSSFLWPV
Trigger: CACAGGCCACAGGAAACTACTTTTATACTTGTGGCATCCCTGAGAGTCTGCGCTCCAGAACAGCCTGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR GCA 72 bp AGCACCTTGCGGGCCCCTATAACCATTCCATCCCATTaGAGTATCACCTCATGTTACAGAAGGAAAACTAGG +
Preference number: 3 (lower is better)
Translates to: STLRAPITIPSH*SITSCYRRKTR
Trigger: CCTAGTTTTCCTTCTGTAACATGAGGTGATACTGCAATGGGATGGAATGGTTATAGGGGCCCGCAAGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR GCA 72 bp TTAATGTCAGCACTTGGACAGAGGCAGGTGGATCTCTaGCAGATCAGTGAGTTCTACATAGTGAGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: LMSALGQRQVDL*QISEFYIVSSR
Trigger: CCTGGAACTCACTATGTAGAACTCACTGATCTGGCAGAGATCCACCTGCCTCTGTCCAAGTGCTGACATTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR TCA 72 bp ATTTTAAATTGTAGACAATGTTTAATTCCTGTCCCGTaGCTTCTCAGGGCGGCAGGGTCATTAGTCCCCTCT +
Preference number: 3 (lower is better)
Translates to: ILNCRQCLIPVP*LLRAAGSLVPS
Trigger: AGAGGGGACTAATGACCCTGCCGCCCTGAGAAGTCACGGGACAGGAATTAAACATTGTCTACAATTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CCA 72 bp TCTCAGGGATGCCACAAGTATAAAAGTAGTTTCCTGTaGCCTGTGAAAACCACTCTAGAATCTTCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: SQGCHKYKSSFL*PVKTTLESSKV
Trigger: GACCTTGGAAGATTCTAGAGTGGTTTTCACAGGCCACAGGAAACTACTTTTATACTTGTGGCATCCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GCTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCCTGCTGGCCTCGTCCACCAGCTCTaGCTGCTGGGGGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: ADQAAPCFVPGTLLAPAGLVHQL*LLGDLH
Trigger: GTGAAGGTCCCCCAGCAGGCAGAGCTGGTGGACGAG...GCCAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp AGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGCAGGACCAGCTCTGCCTGCTaGGGGACCTTCACGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RRWSAGWQPCLQDGQQGRTSSAC*GTFTAG
Trigger: GCCCGCCGTGAAGGTCCCCCAGCAGGCAGAGCTGGT...CCTGCCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TGGTCATCTGCTGCCGACGCCAGCCACTTCCCATCAGGGCTGAACCGGAGACACGGTCCCAGACGCGGATaGAGCCCGACTGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: WSSAADASHFPSGLNRRHGPRRG*SPTGNQ
Trigger: CTGGTTCCCAGTCGGGCTCCATCCGCGTCTGGGACC...GTGTCTCCGGTTCAGCCCTGATGGGAAGTGGCTGGCGTCGGCAGCAGATGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR CCA 90 bp AAGCTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCCTGCTGAGACACCGCACAGCCTaGCTGTGCCCCCTATATCGG +
Preference number: 4 (lower is better)
Translates to: KLTRQPLASCLALCWPLLRHRTA*LCPLYR
Trigger: CCGATATAGGGGGCACAGCCAGGCTGTGCGGTGTCT...CAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GCTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCCTGCTGGCCTCACTTCTCCGGGGTaGTGTCCGACTGATGCTGTT +
Preference number: 4 (lower is better)
Translates to: ADQAAPCFVPGTLLAPAGLTSPG*CPTDAV
Trigger: AACAGCATCAGTCGGACACCACCCCGGAGAAGTGAG...GCCAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GCTGGAGTTGCCCTGAGCAGTAAGGGCTGTGCAAGACTGCAGCTGCTGCCGGAGTGGGCCGCTCATAGATaGGGCGGAGGGAGACACCAG +
Preference number: 4 (lower is better)
Translates to: AGVALSSKGCARLQLLPEWAAHR*GGGRHQ
Trigger: CTGGTGTCTCCCTCCGCCGCATCTATGAGCGGCCCA...CTCCGGCAGCAGCTGCAGTCTTGCACAGCCCTTACTGCTCAGGGCAACTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp ACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGGCTTGCTGCATGTCGTaGTGGGCCGCTCATAGATGC +
Preference number: 4 (lower is better)
Translates to: TEEVVSRLATMPPGWPAGACCMS*WAAHRC
Trigger: GCATCTATGAGCGGCCCAGCACGACATGCAGCAAGC...CCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp AAGCTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCCTGCTGTTATGGACCACAGGTTaGCTCGGCAGTCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: KLTRQPLASCLALCWPLLLWTTG*LGSHPH
Trigger: GTGGGGATGACTGCCGAGTCAACCTGTGGTCCATAA...CAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp AGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGCAGGGAAACTCCACCACATTaGCAGGCCCTGTATGACCCG +
Preference number: 4 (lower is better)
Translates to: RRWSAGWQPCLQDGQQGRETPPH*QALYDP
Trigger: CGGGTCATACAGGGCCTGTCAATGTGGTGGAGTTTC...CCTGCCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGCCCTCTGAGGCTTGCTaGATGTCGTGCTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: ELSPQPRRWSAGWQPCLQPSEAC*MSCWAA
Trigger: AGCGGCCCAGCACGACATGCAGCAAGCCTCAGAGGG...CTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp ACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGCTCCTTCACTGTGGCTaGATCATCTTCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TEEVVSRLATMPPGWPAGLLHCG*IIFWGC
Trigger: GCACCCCCAGAAGATGATGCAGCCACAGTGAAGGAG...CCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GCTGGCCACAGATGGAGGCTGCACTGGGCCTGGAGTACGACAGTCTCTGCTTCCGCTCACGGAAGGCACTaGCATGGCGGCCACTCAAAC +
Preference number: 4 (lower is better)
Translates to: AGHRWRLHWAWSTTVSASAHGRH*HGGHSN
Trigger: GTTTGAGTGGCCGCCATGGCAGTGCCTTCCGTGAGC...GGAAGCAGAGACTGTCGTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GCTGAGGCTCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGGGTCCCAGACGCGGATaGAGCCCGACTGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: AEARGPQAYSKYVCVRAAGPRRG*SPTGNQ
Trigger: CTGGTTCCCAGTCGGGCTCCATCCGCGTCTGGGACC...CGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGAGCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CCA 90 bp GCTGGCCACAGATGGAGGCTGCACTGGGCCTGGAGTACGACAGTCTCTGCTTCCTGCTGCATGTCGTGCTaGGCCGCTCATAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: AGHRWRLHWAWSTTVSASCCMSC*AAHRCG
Trigger: GCCGCATCTATGAGCGGCCCAGCACGACATGCAGCA...GGAAGCAGAGACTGTCGTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GCTGGCCACAGATGGAGGCTGCACTGGGCCTGGAGTACGACAGTCTCTGCTTCCTCTGGGGCAGCACTGTaGTGCACAGGTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AGHRWRLHWAWSTTVSASSGAAL*CTGPAS
Trigger: GGAAGCTGGACCTGTGCACCACAGTGCTGCCCCAGA...GGAAGCAGAGACTGTCGTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp GATGCGGCGGAGGGAGACACCAGGGTTAGGGGTCTGTaGTGTCAGAGGCTGGTTAGCCTGCACAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: DAAEGDTRVRGL*CQRLVSLHRVL
Trigger: CAGGACCCTGTGCAGGCTAACCAGCCTCTGACACAACAGACCCCTAACCCTGGTGTCTCCCTCCGCCGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp ACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGTGTGTCCTGGGAGCCTaGGGCCACAAATTCACCATA +
Preference number: 4 (lower is better)
Translates to: TEEVVSRLATMPPGWPAGCVLGA*GHKFTI
Trigger: TATGGTGAATTTGTGGCCTCAGGCTCCCAGGACACA...CCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GCTGAGGCTCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGGCCTGCACAGGGTCCTaGGTCACAGTTCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: AEARGPQAYSKYVCVRAAACTGS*VTVPVL
Trigger: CAGGACGGGAACTGTGACCCAGGACCCTGTGCAGGC...CGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGAGCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp AGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGCAGGCATCCATGGCTGGGCTaGGTTTTGAGACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RRWSAGWQPCLQDGQQGRHPWLG*VLRPPS
Trigger: TGAAGGAGGTCTCAAAACCCAGCCCAGCCATGGATG...CCTGCCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp CCCTGGAGAACAGGGCTTGCTAGGGCTCCTCCCTTCTaGCTGGCTGCATCAACAGGCTGTTCTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PWRTGLARAPPF*LAASTGCSGAQ
Trigger: CTGCGCTCCAGAACAGCCTGTTGATGCAGCCAGCAAGAAGGGAGGAGCCCTAGCAAGCCCTGTTCTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp GCTGGCCACAGATGGAGGCTGCACTGGGCCTGGAGTACGACAGTCTCTGCTTCCCCACCTTGCCCCAGTTaGCAAGGACCACATCAAAGC +
Preference number: 4 (lower is better)
Translates to: AGHRWRLHWAWSTTVSASPPCPS*QGPHQS
Trigger: GCTTTGATGTGGTCCTTGTCAACTGGGGCAAGGTGG...GGAAGCAGAGACTGTCGTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp GGTCCCCGGTCCCAGCCCTGGAGAACAGGGCTTGCTAGGGCTCCTCCCTTCTTGGGGAGGCTTTCTGATTaGCAATGTTCAGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPRSQPWRTGLARAPPFLGRLSD*QCSGGP
Trigger: TGGACCTCCTGAACATTGTCAATCAGAAAGCCTCCC...CAAGAAGGGAGGAGCCCTAGCAAGCCCTGTTCTCCAGGGCTGGGACCGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp TCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGGGTGCTCCTGTGTGGTCATCTGCTaGCGACGCCAGCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: SWATGIQQVCMCEGCGCSCVVIC*RRQPLP
Trigger: GGGAAGTGGCTGGCGTCGGCAGCAGATGACCACACA...GGAGCACCCGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGCCACAGACAGGTCATTaGTGGCCACTGCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ELSPQPRRWSAGWQPCLQPQTGH*WPLQSP
Trigger: TGGACTCTGCAGTGGCCATCAATGACCTGTCTGTGG...CTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp CCTGTCAGAGGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTGGAAGGGCGGGGCAGCACTGTGGTaGACAGGTCCAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: PVRGLGYIYGWQRPVWKGGAALW*TGPAST
Trigger: TGTGGAAGCTGGACCTGTGCACCACAGTGCTGCCCC...GCCCTTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp AGGCTTCAAAGACCTGCTCATCCTGTGCCAGCCTTTCCTCCCAGTCTGGAACTGACCTCTCCTCTCGGCTaGTGTCCACACCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: RLQRPAHPVPAFPPSLELTSPLG*CPHPQR
Trigger: CCTCTGTGGGTGTGGACATCAGCCGAGAGGAGAGGT...CAGTTCCAGACTGGGAGGAAAGGCTGGCACAGGATGAGCAGGTCTTTGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp GCTGGAGTTGCCCTGAGCAGTAAGGGCTGTGCAAGACTGCAGCTGCTGCCGGAGCACAGCCTTTCCTCCTaGTGTCCCAGAGTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: AGVALSSKGCARLQLLPEHSLSS*CPRVLA
Trigger: TGCTAAAACTCTGGGACATCAGGAGGAAAGGCTGTG...CTCCGGCAGCAGCTGCAGTCTTGCACAGCCCTTACTGCTCAGGGCAACTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR GCA 90 bp CCTGTCAGAGGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTGGAAGGGCTCAGCTTCAGGGAGGTaGACCCGGTCTGGACATAGC +
Preference number: 4 (lower is better)
Translates to: PVRGLGYIYGWQRPVWKGSASGR*TRSGHS
Trigger: GCTATGTCCAGACCGGGTGCACCTCCCTGAAGCTGA...GCCCTTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp AGCCCGCTCACTGCCTTTGCCCCCAGGTGTTTGAGTTaGGCTACAACAACCGCACCACCGAGTTCACCAACC +
Preference number: 4 (lower is better)
Translates to: SPLTAFAPRCLS*ATTTAPPSSPT
Trigger: GGTTGGTGAACTCGGTGGTGCGGTTGTTGTAGCCAAACTCAAACACCTGGGGGCAAAGGCAGTGAGCGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp TGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAGGCCAGCAGCCGCCCTaGGGCCTTGCCCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: CLGEPADIPLIRKSGTVIGQQPP*GLAQHQ
Trigger: TTGGTGCTGGGCAAGGCCTCAGGGCGGCTGCTGGCC...TATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp TCTAGGCAGGCCACAATGTGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGGCGCCGCTCGCTCTCTaGGTTGTGCTTTACCCTCTG +
Preference number: 4 (lower is better)
Translates to: SRQATMCLGEPADIPLIRAPLAL*VVLYPL
Trigger: CAGAGGGTAAAGCACAACTCAGAGAGCGAGCGGCGC...CCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACACATTGTGGCCTGCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp AGGCTTCAAAGACCTGCTCATCCTGTGCCAGCCTTTCCTCCCAGTCTGGAACTGCGCACAGCCTGGCTGTaGCCCCTATATCGGAAGACA +
Preference number: 4 (lower is better)
Translates to: RLQRPAHPVPAFPPSLELRTAWL*PLYRKT
Trigger: TGTCTTCCGATATAGGGGGCACAGCCAGGCTGTGCG...CAGTTCCAGACTGGGAGGAAAGGCTGGCACAGGATGAGCAGGTCTTTGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGGGTGCTCCGACACATTGCTGGCATaGGCGACGATCTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: SWATGIQQVCMCEGCGCSDTLLA*ATISCN
Trigger: GTTGCAAGAGATCGTCGCCCATGCCAGCAATGTGTC...GGAGCACCCGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CCA 90 bp TCTAGGCAGGCCACAATGTGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGCGGATGGAGCCCGACTaGGAACCAGCTACGATGAGC +
Preference number: 4 (lower is better)
Translates to: SRQATMCLGEPADIPLIRRMEPD*EPATMS
Trigger: GCTCATCGTAGCTGGTTCCCAGTCGGGCTCCATCCG...CCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACACATTGTGGCCTGCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CCA 90 bp AGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGCAGGCTAGGAGATATTCATTaGGGTGAAACTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: RRWSAGWQPCLQDGQQGRLGDIH*GETPPH
Trigger: ATGTGGTGGAGTTTCACCCCAATGAATATCTCCTAG...CCTGCCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp AGGCTTCAAAGACCTGCTCATCCTGTGCCAGCCTTTCCTCCCAGTCTGGAACTGGCTGGTCATTGCAGATaGCCAGGTCAGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: RLQRPAHPVPAFPPSLELAGHCR*PGQPPC
Trigger: GCAAGGTGGCTGACCTGGCCATCTGCAATGACCAGC...CAGTTCCAGACTGGGAGGAAAGGCTGGCACAGGATGAGCAGGTCTTTGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GCTGAGGCTCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGTGTCAGGTTCACCCTTaGGTGCAGGAGTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: AEARGPQAYSKYVCVRAACQVHP*VQEWKS
Trigger: TGACTTCCACTCCTGCACCCAAGGGTGAACCTGACA...CGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGAGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp CACCAGGCACTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCGTGTCCAGGTTCTTGTaGCGGCTGGTGAGCACCACA +
Preference number: 4 (lower is better)
Translates to: HQALSLPTDSQHVPLPKSVSRFL*RLVSTT
Trigger: TGTGGTGCTCACCAGCCGCCACAAGAACCTGGACAC...GGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAGTGCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp ATCAGCTGGTCATTGCAGATGGCCAGGTCAGCCACCTaGCCCCAGTTGACAAGGACCACATCAAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: ISWSLQMARSAT*PQLTRTTSKQR
Trigger: GCGCTGCTTTGATGTGGTCCTTGTCAACTGGGGCAAGGTGGCTGACCTGGCCATCTGCAATGACCAGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 72 bp CCTGTAGTCCATACAGCTCGGACAGTGTCCAGGTTCTaGTGGCGGCTGGTGAGCACCACAAACATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: PVVHTARTVSRF*WRLVSTTNMVS
Trigger: CGACACCATGTTTGTGGTGCTCACCAGCCGCCACAAGAACCTGGACACTGTCCGAGCTGTATGGACTACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 72 bp CAAAGGAGCCCGCTCACTGCCTTTGCCCCCAGGTGTTaGAGTTTGGCTACAACAACCGCACCACCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: QRSPLTAFAPRC*SLATTTAPPSS
Trigger: TGAACTCGGTGGTGCGGTTGTTGTAGCCAAACTCAAACACCTGGGGGCAAAGGCAGTGAGCGGGCTCCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp CACCAGGCACTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCAGTCCAAACTGGCCATaGGTAGGTGCAGCTCACGGA +
Preference number: 4 (lower is better)
Translates to: HQALSLPTDSQHVPLPKSSPNWP*VGAAHG
Trigger: TCCGTGAGCTGCACCTACTCATGGCCAGTTTGGACT...GGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAGTGCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp TTAATAAATCTGCCTGATAATTTACAGCAGCAGCCCCGAGGCTGGAGTTGCCCTGCCGCCCTGAGGCCTTaGCCAGCACCAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LINLPDNLQQQPRGWSCPAALRP*PAPRRT
Trigger: TGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGC...AGGGCAACTCCAGCCTCGGGGCTGCTGCTGTAAATTATCAGGCAGATTTATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR GCA 90 bp GCAAGAGCATCTCTATCTACCCTCCTGAGGAGGGGAGCCCTCACAGGGCATGTAGGTGGAAATCCAGGCTaGAGATGTTGGCTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARASLSTLLRRGALTGHVGGNPG*RCWLCG
Trigger: GCCACAAAGCCAACATCTGCAGCCTGGATTTCCACC...TACATGCCCTGTGAGGGCTCCCCTCCTCAGGAGGGTAGATAGAGATGCTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GCTGAGGCTCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGACTCGGACATCATCTTaGCAGCCGTCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: AEARGPQAYSKYVCVRAATRTSS*QPSDPK
Trigger: TTTGGGATCTGACGGCTGGCAAGATGATGTCCGAGT...CGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGAGCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGTTGTCCTGTCGGAGCTaGCAGAAGCTAGGAGATATT +
Preference number: 4 (lower is better)
Translates to: ELSPQPRRWSAGWQPCLQLSCRS*QKLGDI
Trigger: AATATCTCCTAGCTTCTGGCAGCTCCGACAGGACAA...CTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp TCTAGGCAGGCCACAATGTGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAGGGGTAGGAACCGCTaGAGGATCAGCTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SRQATMCLGEPADIPLIRRGRNR*RISFRE
Trigger: CTCCCTGAAGCTGATCCTGCAGCGGTTCCTACCCCT...CCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACACATTGTGGCCTGCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp TCATTCCGTGTGGCAGGGATGATGTCAGGTTCACCCTaGGGTGCAGGAGTGGAAGTCATGACTGACGGTCGT +
Preference number: 4 (lower is better)
Translates to: SFRVAGMMSGSP*GAGVEVMTDGR
Trigger: ACGACCGTCAGTCATGACTTCCACTCCTGCACCCAAGGGTGAACCTGACATCATCCCTGCCACACGGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 72 bp GCACTGCCATGGCGGCCACTCAAACCCGACTTGCTCTaGACGAGGCCACTGATGCTCTTGAGTTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: ALPWRPLKPDLL*TRPLMLLSCLK
Trigger: CTTCAAACAACTCAAGAGCATCAGTGGCCTCGTCAAGAGCAAGTCGGGTTTGAGTGGCCGCCATGGCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCGGCTGGGCTGGGTTTTaGGACCTCCTTCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGGWAGF*DLLHCG
Trigger: GCCACAGTGAAGGAGGTCTCAAAACCCAGCCCAGCC...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp CTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCTATTTAAGACTTCGCTGCTGGGGCTaGGCCGCTCGCTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LSLPTDSQHVPLPKSYLRLRCWG*AARSLS
Trigger: ACTCAGAGAGCGAGCGGCGCAGCCCCAGCAGCGAAG...TCTTAAATAGGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp TCTAGGCAGGCCACAATGTGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGCAGAGTCGACACTTGTaGAACCTCTCCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SRQATMCLGEPADIPLIRQSRHL*NLSSRL
Trigger: CAGCCGAGAGGAGAGGTTGCACAAGTGTCGACTCTG...CCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACACATTGTGGCCTGCCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GAGACTCTGTACTCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGGAGTTGGGCGACACATTGCTGGCATaGGCGACGATCTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: ETLYSLRFAERVRSVELGDTLLA*ATISCN
Trigger: GTTGCAAGAGATCGTCGCCCATGCCAGCAATGTGTC...GCCCAACTCCACAGAGCGAACCCTCTCAGCAAATCTGAGGGAGTACAGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR CCA 90 bp CACCACAAACATGGTGTCGTGGCCTTTGCGTATCTGCGACATGGCATCCTCGTCAGGAGGACACATTGCTaGCATGGGCGACGATCTCTT +
Preference number: 4 (lower is better)
Translates to: HHKHGVVAFAYLRHGILVRRTHC*HGRRSL
Trigger: AAGAGATCGTCGCCCATGCCAGCAATGTGTCCTCCT...GACGAGGATGCCATGTCGCAGATACGCAAAGGCCACGACACCATGTTTGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR CCA 90 bp TCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGGGTGCTCCGAGGAGACATTACTCTaGGAGAAAGCCACACCTATC +
Preference number: 4 (lower is better)
Translates to: SWATGIQQVCMCEGCGCSEETLL*EKATPI
Trigger: GATAGGTGTGGCTTTCTCCCAGAGTAATGTCTCCTC...GGAGCACCCGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCGGCTGCATCATCTTCTaGGGGTGCTGGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGGCIIF*GCWEGL
Trigger: GAGCCCTTCCCAGCACCCCCAGAAGATGATGCAGCC...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp AGGCTTCAAAGACCTGCTCATCCTGTGCCAGCCTTTCCTCCCAGTCTGGAACTGAGGCCTTTAAGCCAATaGGCTCATTCCGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLQRPAHPVPAFPPSLELRPLSQ*AHSVWQ
Trigger: CTGCCACACGGAATGAGCCCATTGGCTTAAAGGCCT...CAGTTCCAGACTGGGAGGAAAGGCTGGCACAGGATGAGCAGGTCTTTGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp TCACCACCTGGAACTTCTCCAGGTCCCAGAAGCGGATaGTCCTGTCGGAGCTGCCAGAAGCTAGGAGATATT +
Preference number: 4 (lower is better)
Translates to: SPPGTSPGPRSG*SCRSCQKLGDI
Trigger: AATATCTCCTAGCTTCTGGCAGCTCCGACAGGACAATCCGCTTCTGGGACCTGGAGAAGTTCCAGGTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR GCA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCCTGGCCATGAGTAGGTaGAGCTCACGGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGLAMSR*SSRKAL
Trigger: CAGTGCCTTCCGTGAGCTGCACCTACTCATGGCCAG...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TCACCCTGTCAGAGGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTGGAAAGGAGGACACATTGCTaGCATGGGCGACGATCTCTT +
Preference number: 4 (lower is better)
Translates to: SPCQRSGLYLWLAEASVERRTHC*HGRRSL
Trigger: AAGAGATCGTCGCCCATGCCAGCAATGTGTCCTCCT...TTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp CTGATGCTCTTGAGTTGTTTGAAGCAGAGTCGACACTaGTGCAACCTCTCCTCTCGGCTGATGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: LMLLSCLKQSRH*CNLSSRLMSTP
Trigger: GGGTGTGGACATCAGCCGAGAGGAGAGGTTGCACAAGTGTCGACTCTGCTTCAAACAACTCAAGAGCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 72 bp AAACTTGAGTATCCAGGTAAAGCACATAGGGTGGCATaGCCCATCCCAAAGGAGCCCGCTCACTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KLEYPGKAHRVA*PIPKEPAHCLC
Trigger: GCAAAGGCAGTGAGCGGGCTCCTTTGGGATGGGCAATGCCACCCTATGTGCTTTACCTGGATACTCAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp AGGCTTCAAAGACCTGCTCATCCTGTGCCAGCCTTTCCTCCCAGTCTGGAACTGCACTGCAGAGTCCACTaGTGTCTTGATATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RLQRPAHPVPAFPPSLELHCRVH*CLDISC
Trigger: ACAGGAGATATCAAGACATCAGTGGACTCTGCAGTG...CAGTTCCAGACTGGGAGGAAAGGCTGGCACAGGATGAGCAGGTCTTTGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAACACGCAGCGAGTCCTaGCAGCCGCTGTACAAGCAG +
Preference number: 4 (lower is better)
Translates to: CLGEPADIPLIRKSGTVITRSES*QPLYKQ
Trigger: CTGCTTGTACAGCGGCTGCCAGGACTCGCTGCGTGT...TATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp CTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCTATTTAAGATTGACAGGCCCTGTATaGCCCGGGAACTCGGACATC +
Preference number: 4 (lower is better)
Translates to: LSLPTDSQHVPLPKSYLRLTGPV*PGNSDI
Trigger: GATGTCCGAGTTCCCGGGTCATACAGGGCCTGTCAA...TCTTAAATAGGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp TATATCATTTCTAGCACCTTGCGGGCCCCTATAACCATTCCATCCCATTGCAGTCAGGAGTGGAAGTCATaGCTGACGGTCGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YIISSTLRAPITIPSHCSQEWKS*LTVVLG
Trigger: TCCCAGCACGACCGTCAGTCATGACTTCCACTCCTG...ACTGCAATGGGATGGAATGGTTATAGGGGCCCGCAAGGTGCTAGAAATGATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp TATATCATTTCTAGCACCTTGCGGGCCCCTATAACCATTCCATCCCATTGCAGTTCCGTGTGGCAGGGATaGTGTCAGGTTCACCCTTGG +
Preference number: 4 (lower is better)
Translates to: YIISSTLRAPITIPSHCSSVWQG*CQVHPW
Trigger: CCAAGGGTGAACCTGACATCATCCCTGCCACACGGA...ACTGCAATGGGATGGAATGGTTATAGGGGCCCGCAAGGTGCTAGAAATGATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAAATTTAGCCGCCCTGAGGCCTTaGCCAGCACCAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GEPADIPLIRKSGTVINLAALRP*PAPRRT
Trigger: TGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGC...TAAATTTATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR GCA 90 bp GACTCTCAGGGATGCCACAAGTATAAAAGTAGTTTCCTGTGGCCTGTGAAAACCCACTGTGTGGTCATCTaGTGCCGACGCCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: DSQGCHKYKSSFLWPVKTHCVVI*CRRQPL
Trigger: AAGTGGCTGGCGTCGGCAGCAGATGACCACACAGTG...GGTTTTCACAGGCCACAGGAAACTACTTTTATACTTGTGGCATCCCTGAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TTAATAAATCTGCCTGATAATTTACAGCAGCAGCCCCGAGGCTGGAGTTGCCCTGCCACACCTATCAGCTaGTCATTGCAGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LINLPDNLQQQPRGWSCPATPIS*SLQMAR
Trigger: CCTGGCCATCTGCAATGACCAGCTGATAGGTGTGGC...AGGGCAACTCCAGCCTCGGGGCTGCTGCTGTAAATTATCAGGCAGATTTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp TGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATATTATGGACCACAGGTTaGCTCGGCAGTCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: CLGEPADIPLIRKSGTVILWTTG*LGSHPH
Trigger: GTGGGGATGACTGCCGAGTCAACCTGTGGTCCATAA...TATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp TGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATATCTTGTGGCGGCTGGTaGGCACCACAAACATGGTGT +
Preference number: 4 (lower is better)
Translates to: CLGEPADIPLIRKSGTVISCGGW*APQTWC
Trigger: ACACCATGTTTGTGGTGCTCACCAGCCGCCACAAGA...TATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GACTCTCAGGGATGCCACAAGTATAAAAGTAGTTTCCTGTGGCCTGTGAAAACCTGGCCTTTGCGTATCTaGGACATGGCATCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: DSQGCHKYKSSFLWPVKTWPLRI*DMASSS
Trigger: GGACGAGGATGCCATGTCGCAGATACGCAAAGGCCA...GGTTTTCACAGGCCACAGGAAACTACTTTTATACTTGTGGCATCCCTGAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp TCACCCTGTCAGAGGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTGGAACATAGCTCTCATACTTaGTCTGCAGCAGTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SPCQRSGLYLWLAEASVEHSSHT*SAAVSR
Trigger: TCGAGAAACTGCTGCAGAGCAAGTATGAGAGCTATG...TTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp CTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCTATTTAAGACACAGAGGGCGGGGCTaGCAAAATGTCAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: LSLPTDSQHVPLPKSYLRHRGRG*QNVSDE
Trigger: CTCATCACTGACATTTTGGCAGCCCCGCCCTCTGTG...TCTTAAATAGGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TCTAGGCAGGCCACAATGTGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGTTAATGTTTGTGTCCTaGGAGCCTGAGGCCACAAAT +
Preference number: 4 (lower is better)
Translates to: SRQATMCLGEPADIPLIRLMFVS*EPEATN
Trigger: ATTTGTGGCCTCAGGCTCCCAGGACACAAACATTAA...CCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACACATTGTGGCCTGCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TATATCATTTCTAGCACCTTGCGGGCCCCTATAACCATTCCATCCCATTGCAGTTGCGTATCTGCGACATaGCATCCTCGTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: YIISSTLRAPITIPSHCSCVSAT*HPRPPA
Trigger: AGCTGGTGGACGAGGATGCCATGTCGCAGATACGCA...ACTGCAATGGGATGGAATGGTTATAGGGGCCCGCAAGGTGCTAGAAATGATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp AGGTCATTGATGGCCACTGCAGAGTCCACTGATGTCTaGATATCTCCTGTAGTCCATACAGCTCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RSLMATAESTDV*ISPVVHTARTV
Trigger: CACTGTCCGAGCTGTATGGACTACAGGAGATATCAAGACATCAGTGGACTCTGCAGTGGCCATCAATGACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
3UTR CAA 72 bp AAACCCGACTTGCTCTTGACGAGGCCACTGATGCTCTaGAGTTGTTTGAAGCAGAGTCGACACTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: KPDLLLTRPLML*SCLKQSRHLCN
Trigger: GTTGCACAAGTGTCGACTCTGCTTCAAACAACTCAAGAGCATCAGTGGCCTCGTCAAGAGCAAGTCGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR GCA 90 bp TATATCATTTCTAGCACCTTGCGGGCCCCTATAACCATTCCATCCCATTGCAGTTGGTGTCGTGGCCTTTaGGTATCTGCGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: YIISSTLRAPITIPSHCSWCRGL*VSATWH
Trigger: ATGCCATGTCGCAGATACGCAAAGGCCACGACACCA...ACTGCAATGGGATGGAATGGTTATAGGGGCCCGCAAGGTGCTAGAAATGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCCTCTCATACTTGCTCTaGAGCAGTTTCTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGLSYLL*SSFSIW
Trigger: CCAGATCGAGAAACTGCTGCAGAGCAAGTATGAGAG...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCCAGATGTTGGCTTTGTaGCCCATGAGTGTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGQMLAL*PMSVRR
Trigger: TCTTCGAACACTCATGGGCCACAAAGCCAACATCTG...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GACTCTCAGGGATGCCACAAGTATAAAAGTAGTTTCCTGTGGCCTGTGAAAACCAGACCTCCTTCACTGTaGCTGCATCATCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DSQGCHKYKSSFLWPVKTRPPSL*LHHLLG
Trigger: CCCCAGAAGATGATGCAGCCACAGTGAAGGAGGTCT...GGTTTTCACAGGCCACAGGAAACTACTTTTATACTTGTGGCATCCCTGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GACTCTCAGGGATGCCACAAGTATAAAAGTAGTTTCCTGTGGCCTGTGAAAACCGCAACTGCACATCCATaGCTGGGCTGGGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: DSQGCHKYKSSFLWPVKTATAHP*LGWVLR
Trigger: TCTCAAAACCCAGCCCAGCCATGGATGTGCAGTTGC...GGTTTTCACAGGCCACAGGAAACTACTTTTATACTTGTGGCATCCCTGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
3UTR CAA 72 bp CAAGATGTGATGCTGTCCACCCTTTTATCCCAGTATTaGAGAGGCAAAGGCAGGCAGATCTCTGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: QDVMLSTLLSQY*RGKGRQISELE
Trigger: CTCTAGCTCAGAGATCTGCCTGCCTTTGCCTCTCAAATACTGGGATAAAAGGGTGGACAGCATCACATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR TCA 90 bp CTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCTATTTAAGACACAGGGAGGCTTTCTaGTTGACAATGTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLPTDSQHVPLPKSYLRHREAF*LTMFRR
Trigger: CCTCCTGAACATTGTCAATCAGAAAGCCTCCCTGTG...TCTTAAATAGGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAAATTTAAGAGGCTGGTTAGCCTaGACAGGGTCCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: GEPADIPLIRKSGTVINLRGWLA*TGSWVT
Trigger: TGTGACCCAGGACCCTGTGCAGGCTAACCAGCCTCT...TAAATTTATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAAATTTATTACCCTCTGAGGCTTaGTGCATGTCGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GEPADIPLIRKSGTVINLLPSEA*CMSCWA
Trigger: GGCCCAGCACGACATGCAGCAAGCCTCAGAGGGTAA...TAAATTTATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR GCA 90 bp GGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAAATTTATTTGGCACCGGCAACTaGGGCAACTGCACATCCATG +
Preference number: 4 (lower is better)
Translates to: GEPADIPLIRKSGTVINLFGTGN*GNCTSM
Trigger: CATGGATGTGCAGTTGCCGCAGTTGCCGGTGCCAAA...TAAATTTATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR TCA 90 bp CTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCTATTTAAGAAGATATTCATTGGGGTaGAACTCCACCACATTGACA +
Preference number: 4 (lower is better)
Translates to: LSLPTDSQHVPLPKSYLRRYSLG*NSTTLT
Trigger: TGTCAATGTGGTGGAGTTTCACCCCAATGAATATCT...TCTTAAATAGGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CCA 90 bp GGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAAATTTAACAAACATGGTGTCGTaGCCTTTGCGTATCTGCGAC +
Preference number: 4 (lower is better)
Translates to: GEPADIPLIRKSGTVINLTNMVS*PLRICD
Trigger: GTCGCAGATACGCAAAGGCCACGACACCATGTTTGT...TAAATTTATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp CTGGGTCCCGCCGCACAGAGCTGGGTTCCTGGTCAAGCCAGGAGCACCTGGAGGAGCCGCCCTGAGGCCTaGCCCAGCACCAAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LGPAAQSWVPGQARSTWRSRPEA*PSTKED
Trigger: GTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGCT...CCTCCAGGTGCTCCTGGCTTGACCAGGAACCCAGCTCTGTGCGGCGGGACCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS TCA 90 bp CAGGTTGACTCGGCAGTCATCCCCACCAGTGGCCAGCAGCCGCCCTaGGGCCTTGCCCAGCACCAAGGAGGACACATTGCTGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: QVDSAVIPTSGQQPP*GLAQHQGGHIAGMG
Trigger: GCCCATGCCAGCAATGTGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGCTGCTGGCCACTGGTGGGGATGACTGCCGAGTCAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp ACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGCTGGGACCTCGAGATTaGGCACCGGCAACTGCGGCA +
Preference number: 5 (lower is better)
Translates to: TEEVVSRLATMPPGWPAGLGPRD*APATAA
Trigger: TGCCGCAGTTGCCGGTGCCAAATCTCGAGGTCCCAG...CCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp ACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGAACTTCCAGGCTGTCTaGGTGACCACAGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: TEEVVSRLATMPPGWPAGNFQAV*VTTGVA
Trigger: GGCCACCCCTGTGGTCACCAAGACAGCCTGGAAGTT...CCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp GCTGACCAGGCAGCCCCTTGCTTCGTGCCTGGCACTCTGCTGGCCCCTGCTGGCAGCTCCTCAGGAGTGTaGAGACGGACACTCTCCACA +
Preference number: 5 (lower is better)
Translates to: ADQAAPCFVPGTLLAPAGSSSGV*RRTLST
Trigger: TGTGGAGAGTGTCCGTCTCAACACTCCTGAGGAGCT...GCCAGCAGGGGCCAGCAGAGTGCCAGGCACGAAGCAAGGGGCTGCCTGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS TCA 90 bp CTGTGTGGTCATCTGCTGCCGACGCCAGCCACTTCCCATCAGGGCTaGACCGGAGACACCGCACAGCCTGGCTGTGCCCCCTATATCGGA +
Preference number: 5 (lower is better)
Translates to: LCGHLLPTPATSHQG*TGDTAQPGCAPYIG
Trigger: TCCGATATAGGGGGCACAGCCAGGCTGTGCGGTGTCTCCGGTTCAGCCCTGATGGGAAGTGGCTGGCGTCGGCAGCAGATGACCACACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS GCA 90 bp CCAGCAGCCGCCCTGAGGCCTTGCCCAGCACCAAGGAGGACACATTaGTGGCATGGGCGACGATCTCTTGCAACTTCCAGGCTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: PAAALRPCPAPRRTH*WHGRRSLATSRLSW
Trigger: CCAAGACAGCCTGGAAGTTGCAAGAGATCGTCGCCCATGCCAGCAATGTGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp TGGTCATCTGCTGCCGACGCCAGCCACTTCCCATCAGGGCTGAACCGGAGACACAACTTCCAGGCTGTCTaGGTGACCACAGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: WSSAADASHFPSGLNRRHNFQAV*VTTGVA
Trigger: GGCCACCCCTGTGGTCACCAAGACAGCCTGGAAGTT...GTGTCTCCGGTTCAGCCCTGATGGGAAGTGGCTGGCGTCGGCAGCAGATGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp AGGCTTCAAAGACCTGCTCATCCTGTGCCAGCCTTTCCTCCCAGTCTGGAACTGAGCCGCCCTGAGGCCTaGCCCAGCACCAAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RLQRPAHPVPAFPPSLELSRPEA*PSTKED
Trigger: GTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGCT...CAGTTCCAGACTGGGAGGAAAGGCTGGCACAGGATGAGCAGGTCTTTGAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp ACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGTTTATGGACCACAGGTaGACTCGGCAGTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: TEEVVSRLATMPPGWPAGFMDHR*TRQSSP
Trigger: TGGGGATGACTGCCGAGTCAACCTGTGGTCCATAAA...CCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp ACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGATGGCCAGCAGGGCTGCAGATGTTGGCTTaGTGGCCCATGAGTGTTCGA +
Preference number: 5 (lower is better)
Translates to: TEEVVSRLATMPPGWPAGLQMLA*WPMSVR
Trigger: TCGAACACTCATGGGCCACAAAGCCAACATCTGCAG...CCCTGCTGGCCATCCTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp GCTGAGGCTCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGGCCAGGTCAGCCACCTaGCCCCAGTTGACAAGGACC +
Preference number: 5 (lower is better)
Translates to: AEARGPQAYSKYVCVRAAARSAT*PQLTRT
Trigger: GGTCCTTGTCAACTGGGGCAAGGTGGCTGACCTGGC...CGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGAGCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp AGGCTTCAAAGACCTGCTCATCCTGTGCCAGCCTTTCCTCCCAGTCTGGAACTGCAGCAGCCGTCGGGGTaGAAGAGGACACTCCTGACG +
Preference number: 5 (lower is better)
Translates to: RLQRPAHPVPAFPPSLELQQPSG*KRTLLT
Trigger: CGTCAGGAGTGTCCTCTTCAACCCCGACGGCTGCTG...CAGTTCCAGACTGGGAGGAAAGGCTGGCACAGGATGAGCAGGTCTTTGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp GAGCTTAGTCCACAACCGAGGAGGTGGTCAGCAGGCTGGCAACCATGCCTCCAGGCCACCTTGCCCCAGTaGACAAGGACCACATCAAAG +
Preference number: 5 (lower is better)
Translates to: ELSPQPRRWSAGWQPCLQATLPQ*TRTTSK
Trigger: CTTTGATGTGGTCCTTGTCAACTGGGGCAAGGTGGC...CTGGAGGCATGGTTGCCAGCCTGCTGACCACCTCCTCGGTTGTGGACTAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS CCA 90 bp AGAGTTTTAGCAGCTTCCAGGTCCCAGACGCGGATGGAGCCCGACTaGGAACCAGCTACGATGAGCTCCTCAGGAGTGTTGAGACGGACA +
Preference number: 5 (lower is better)
Translates to: RVLAASRSQTRMEPD*EPATMSSSGVLRRT
Trigger: TGTCCGTCTCAACACTCCTGAGGAGCTCATCGTAGCTGGTTCCCAGTCGGGCTCCATCCGCGTCTGGGACCTGGAAGCTGCTAAAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp AGAGGTGTGGATTGCAGCACAGGCCTCCGCACCACGGGTGAGAGATGCACAGTGTTTATGGACCACAGGTaGACTCGGCAGTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: RGVDCSTGLRTTGERCTVFMDHR*TRQSSP
Trigger: TGGGGATGACTGCCGAGTCAACCTGTGGTCCATAAA...CACTGTGCATCTCTCACCCGTGGTGCGGAGGCCTGTGCTGCAATCCACACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS CCA 90 bp AGAATTTTAGCAGCTTCCAGGTCCCAGACGCGGATGGAGCCCGACTaGGAACCAGCTACGATGAGCTCCTCAGGAGTGTTGAGACGGACA +
Preference number: 5 (lower is better)
Translates to: RILAASRSQTRMEPD*EPATMSSSGVLRRT
Trigger: TGTCCGTCTCAACACTCCTGAGGAGCTCATCGTAGCTGGTTCCCAGTCGGGCTCCATCCGCGTCTGGGACCTGGAAGCTGCTAAAATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp CCTGTCAGAGGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTGGAAGGGCTCCAGGCTGCAGATGTaGGCTTTGTGGCCCATGAGT +
Preference number: 5 (lower is better)
Translates to: PVRGLGYIYGWQRPVWKGSRLQM*ALWPMS
Trigger: ACTCATGGGCCACAAAGCCAACATCTGCAGCCTGGA...GCCCTTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp GCAAGAGCATCTCTATCTACCCTCCTGAGGAGGGGAGCCCTCACAGGGCATGTAAAGCAGAGTCGACACTaGTGCAACCTCTCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: ARASLSTLLRRGALTGHVKQSRH*CNLSSR
Trigger: CCGAGAGGAGAGGTTGCACAAGTGTCGACTCTGCTT...TACATGCCCTGTGAGGGCTCCCCTCCTCAGGAGGGTAGATAGAGATGCTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp GCAAGAGCATCTCTATCTACCCTCCTGAGGAGGGGAGCCCTCACAGGGCATGTAATGGGCGACGATCTCTaGCAACTTCCAGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: ARASLSTLLRRGALTGHVMGDDL*QLPGCL
Trigger: AAGACAGCCTGGAAGTTGCAAGAGATCGTCGCCCAT...TACATGCCCTGTGAGGGCTCCCCTCCTCAGGAGGGTAGATAGAGATGCTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp GCTGGCCACAGATGGAGGCTGCACTGGGCCTGGAGTACGACAGTCTCTGCTTCCATGATGCAGTTAGGCTaGTTTATGGACCACAGGTTG +
Preference number: 5 (lower is better)
Translates to: AGHRWRLHWAWSTTVSASMMQLG*FMDHRL
Trigger: CAACCTGTGGTCCATAAACAAGCCTAACTGCATCAT...GGAAGCAGAGACTGTCGTACTCCAGGCCCAGTGCAGCCTCCATCTGTGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp AGATGCACAGTGGCCATTCTGGTCAAGCCCTCCATCAGTATCTTTGGGGCAGCGAGCTCCTCAGGAGTGTaGAGACGGACACTCTCCACA +
Preference number: 5 (lower is better)
Translates to: RCTVAILVKPSISIFGAASSSGV*RRTLST
Trigger: TGTGGAGAGTGTCCGTCTCAACACTCCTGAGGAGCT...CGCTGCCCCAAAGATACTGATGGAGGGCTTGACCAGAATGGCCACTGTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212968.2
CDS TCA 90 bp AGCTCCTCAGGAGTGTTGAGACGGACACTCTCCACAGGGGACGTGTaGCCTGTCAGGCTCATGATGCAGTTAGGCTTGTTTATGGACCAC +
Preference number: 5 (lower is better)
Translates to: SSSGVLRRTLSTGDV*PVRLMMQLGLFMDH
Trigger: GTGGTCCATAAACAAGCCTAACTGCATCATGAGCCTGACAGGTCACACGTCCCCTGTGGAGAGTGTCCGTCTCAACACTCCTGAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp TTAATAAATCTGCCTGATAATTTACAGCAGCAGCCCCGAGGCTGGAGTTGCCCTGGTCCCAGAAGCGGATaGTCCTGTCGGAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LINLPDNLQQQPRGWSCPGPRSG*SCRSCQ
Trigger: CTGGCAGCTCCGACAGGACAATCCGCTTCTGGGACC...AGGGCAACTCCAGCCTCGGGGCTGCTGCTGTAAATTATCAGGCAGATTTATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp TCACCCTGTCAGAGGTCTGGGCTATATTTATGGCTGGCAGAGGCCAGTGTGGAAATGGTGTCGTGGCCTTaGCGTATCTGCGACATGGCA +
Preference number: 5 (lower is better)
Translates to: SPCQRSGLYLWLAEASVEMVSWP*RICDMA
Trigger: TGCCATGTCGCAGATACGCAAAGGCCACGACACCAT...TTCCACACTGGCCTCTGCCAGCCATAAATATAGCCCAGACCTCTGACAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCCCTATCAGCTGGTCATaGCAGATGGCCAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGPISWS*QMARSA
Trigger: GGCTGACCTGGCCATCTGCAATGACCAGCTGATAGG...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp GCTGAGGCTCGTGGGCCACAGGCATACAGCAAGTATGTATGTGTGAGGGCTGCGATGCTCTTGAGTTGTTaGAAGCAGAGTCGACACTTG +
Preference number: 5 (lower is better)
Translates to: AEARGPQAYSKYVCVRAAMLLSC*KQSRHL
Trigger: CAAGTGTCGACTCTGCTTCAAACAACTCAAGAGCAT...CGCAGCCCTCACACATACATACTTGCTGTATGCCTGTGGCCCACGAGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp TTAATAAATCTGCCTGATAATTTACAGCAGCAGCCCCGAGGCTGGAGTTGCCCTACCAAGGAGGACACATaGCTGGCATGGGCGACGATC +
Preference number: 5 (lower is better)
Translates to: LINLPDNLQQQPRGWSCPTKEDT*LAWATI
Trigger: GATCGTCGCCCATGCCAGCAATGTGTCCTCCTTGGT...AGGGCAACTCCAGCCTCGGGGCTGCTGCTGTAAATTATCAGGCAGATTTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp CTCTCCCTGCCCACTGATTCTCAACATGTTCCTCTCCCCAAATCCTATTTAAGAACAGTGTCCAGGTTCTaGTGGCGGCTGGTGAGCACC +
Preference number: 5 (lower is better)
Translates to: LSLPTDSQHVPLPKSYLRTVSRF*WRLVST
Trigger: GGTGCTCACCAGCCGCCACAAGAACCTGGACACTGT...TCTTAAATAGGATTTGGGGAGAGGAACATGTTGAGAATCAGTGGGCAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp TTACACAAGTGCAATCTGAATCGTCAGTACTGGGAGACCCTATGGAGAGTGGGCAGGCCACTGATGCTCTaGAGTTGTTTGAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: LHKCNLNRQYWETLWRVGRPLML*SCLKQS
Trigger: ACTCTGCTTCAAACAACTCAAGAGCATCAGTGGCCT...GCCCACTCTCCATAGGGTCTCCCAGTACTGACGATTCAGATTGCACTTGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS-3UTR CAA 90 bp GGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAAATTTAATGGGCGACGATCTCTaGCAACTTCCAGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GEPADIPLIRKSGTVINLMGDDL*QLPGCL
Trigger: AAGACAGCCTGGAAGTTGCAAGAGATCGTCGCCCAT...TAAATTTATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS-3UTR CAA 90 bp TGTCTGGGAGAGCCAGCGGATATTCCTCTCATAAGGAAGTCAGGAACAGTTATAATGATGCAGTTAGGCTaGTTTATGGACCACAGGTTG +
Preference number: 5 (lower is better)
Translates to: CLGEPADIPLIRKSGTVIMMQLG*FMDHRL
Trigger: CAACCTGTGGTCCATAAACAAGCCTAACTGCATCAT...TATAACTGTTCCTGACTTCCTTATGAGAGGAATATCCGCTGGCTCTCCCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS TCA 72 bp CATCTGCTGCCGACGCCAGCCACTTCCCATCAGGGCTaGACCGGAGACACCGCACAGCCTGGCTGTGCCCCC +
Preference number: 6 (lower is better)
Translates to: HLLPTPATSHQG*TGDTAQPGCAP
Trigger: GGGGGCACAGCCAGGCTGTGCGGTGTCTCCGGTTCAGCCCTGATGGGAAGTGGCTGGCGTCGGCAGCAGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9
CDS CAA 90 bp ACTCGGCAGTCATCCCCACCAGTGGCCAGCAGCCGCCCTGAGGCCTaGCCCAGCACCAAGGAGGACACATTGCTGGCATGGGCGACGATC +
Preference number: 6 (lower is better)
Translates to: TRQSSPPVASSRPEA*PSTKEDTLLAWATI
Trigger: GATCGTCGCCCATGCCAGCAATGTGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGCTGCTGGCCACTGGTGGGGATGACTGCCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS TCA 72 bp TCGGCAGTCATCCCCACCAGTGGCCAGCAGCCGCCCTaGGGCCTTGCCCAGCACCAAGGAGGACACATTGCT +
Preference number: 6 (lower is better)
Translates to: SAVIPTSGQQPP*GLAQHQGGHIA
Trigger: AGCAATGTGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGCTGCTGGCCACTGGTGGGGATGACTGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS CAA 90 bp GCCAGCAGCCGCCCTGAGGCCTTGCCCAGCACCAAGGAGGACACATaGCTGGCATGGGCGACGATCTCTTGCAACTTCCAGGCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: ASSRPEALPSTKEDT*LAWATISCNFQAVL
Trigger: CAAGACAGCCTGGAAGTTGCAAGAGATCGTCGCCCATGCCAGCAATGTGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCGGCTGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS CCA 72 bp GCAGCTTCCAGGTCCCAGACGCGGATGGAGCCCGACTaGGAACCAGCTACGATGAGCTCCTCAGGAGTGTTG +
Preference number: 6 (lower is better)
Translates to: AASRSQTRMEPD*EPATMSSSGVL
Trigger: CAACACTCCTGAGGAGCTCATCGTAGCTGGTTCCCAGTCGGGCTCCATCCGCGTCTGGGACCTGGAAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS GCA 72 bp GCCCTGAGGCCTTGCCCAGCACCAAGGAGGACACATTaGTGGCATGGGCGACGATCTCTTGCAACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: ALRPCPAPRRTH*WHGRRSLATSR
Trigger: CCTGGAAGTTGCAAGAGATCGTCGCCCATGCCAGCAATGTGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS CAA 72 bp CGCCCTGAGGCCTTGCCCAGCACCAAGGAGGACACATaGCTGGCATGGGCGACGATCTCTTGCAACTTCCAG +
Preference number: 6 (lower is better)
Translates to: RPEALPSTKEDT*LAWATISCNFQ
Trigger: CTGGAAGTTGCAAGAGATCGTCGCCCATGCCAGCAATGTGTCCTCCTTGGTGCTGGGCAAGGCCTCAGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS CCA 72 bp CTGAGGCCTTGCCCAGCACCAAGGAGGACACATTGCTaGCATGGGCGACGATCTCTTGCAACTTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LRPCPAPRRTHC*HGRRSLATSRL
Trigger: CAGCCTGGAAGTTGCAAGAGATCGTCGCCCATGCCAGCAATGTGTCCTCCTTGGTGCTGGGCAAGGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS CCA 72 bp GCCTTGCCCAGCACCAAGGAGGACACATTGCTGGCATaGGCGACGATCTCTTGCAACTTCCAGGCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: ALPSTKEDTLLA*ATISCNFQAVL
Trigger: CAAGACAGCCTGGAAGTTGCAAGAGATCGTCGCCCATGCCAGCAATGTGTCCTCCTTGGTGCTGGGCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034239.9
ENSMUST00000212968.2
CDS CCA 72 bp TGCTCTGCAGCAGTTTCTCGATCTGGGGCAGCACTGTaGTGCACAGGTCCAGCTTCCACAGGGAGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: CSAAVSRSGAAL*CTGPASTGRLS
Trigger: AGAAAGCCTCCCTGTGGAAGCTGGACCTGTGCACCACAGTGCTGCCCCAGATCGAGAAACTGCTGCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034239.9