Pregenerated sensors for KATNAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041298Ensembl transcript IDs: ENSMUST00000047257.15, ENSMUST00000110509.9, ENSMUST00000149169.3
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACCCACCATCTACACAGCGAGGGTGACCAGCACGGTGTGCCCATaGTGGGACGATGAAACAACTGTGCACACACCAGCCCCTGTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: PPTIYTARVTSTVCP*WDDETTVHTPAPVL Trigger: CAGCACAGGGGCTGGTGTGTGCACAGTTGTTTCATCGTCCCATCATGGGCACACCGTGCTGGTCACCCTCGCTGTGTAGATGGTGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 90 bp | CATACTCCTGGGCGGCTGCTTGTTTTAGGCCTCCGTGTGCCTGCTTaGCTGCTTGTGGGTGCTGGTTTCCCTACTCCACCCCACTTGGTG | + |
|
Preference number: 1 (lower is better) Translates to: HTPGRLLVLGLRVPA*LLVGAGFPTPPHLV Trigger: CACCAAGTGGGGTGGAGTAGGGAAACCAGCACCCACAAGCAGTCAAGCAGGCACACGGAGGCCTAAAACAAGCAGCCGCCCAGGAGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 90 bp | CACACATACTCCTGGGCGGCTGCTTGTTTTAGGCCTCCGTGTGCCTaGTTGACTGCTTGTGGGTGCTGGTTTCCCTACTCCACCCCACTT | + |
|
Preference number: 1 (lower is better) Translates to: HTYSWAAACFRPPCA*LTACGCWFPYSTPL Trigger: AAGTGGGGTGGAGTAGGGAAACCAGCACCCACAAGCAGTCAAGCAGGCACACGGAGGCCTAAAACAAGCAGCCGCCCAGGAGTATGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | GCTGCCCTTGTAGAGACCTGGGTTTGGTTCCCAGCATCCACACGGTaGCTCACACACCCTGTAATTCCAGAACCAGGGGACCCAATGTCC | + |
|
Preference number: 1 (lower is better) Translates to: AALVETWVWFPASTR*LTHPVIPEPGDPMS Trigger: GGACATTGGGTCCCCTGGTTCTGGAATTACAGGGTGTGTGAGCCACCGTGTGGATGCTGGGAACCAAACCCAGGTCTCTACAAGGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | AAAACCTGTCAGTGCCATGTCTGCTATGCTCCGCTGTGTGTGCAATaGTCAGCCTGCTGGGGCCCTTCACTCCCTCTCAGAAGAAAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: KTCQCHVCYAPLCVQ*SACWGPSLPLRRKG Trigger: CCCCTTTCTTCTGAGAGGGAGTGAAGGGCCCCAGCAGGCTGACCATTGCACACACAGCGGAGCATAGCAGACATGGCACTGACAGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 90 bp | CAGTGCCATGTCTGCTATGCTCCGCTGTGTGTGCAATGGTCAGCCTaGTGGGGCCCTTCACTCCCTCTCAGAAGAAAGGGGGAAATTTAC | + |
|
Preference number: 1 (lower is better) Translates to: QCHVCYAPLCVQWSA*WGPSLPLRRKGEIY Trigger: GTAAATTTCCCCCTTTCTTCTGAGAGGGAGTGAAGGGCCCCAGCAGGCTGACCATTGCACACACAGCGGAGCATAGCAGACATGGCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 90 bp | ACGACAAAACCTGTCAGTGCCATGTCTGCTATGCTCCGCTGTGTGTaGAATGGTCAGCCTGCTGGGGCCCTTCACTCCCTCTCAGAAGAA | + |
|
Preference number: 1 (lower is better) Translates to: TTKPVSAMSAMLRCV*NGQPAGALHSLSEE Trigger: TTCTTCTGAGAGGGAGTGAAGGGCCCCAGCAGGCTGACCATTGCACACACAGCGGAGCATAGCAGACATGGCACTGACAGGTTTTGTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | GCTCAGCCGTTAAGAACACTGGCTGCCCTTGTAGAGACCTGGGTTTaGTTCCCAGCATCCACACGGTGGCTCACACACCCTGTAATTCCA | + |
|
Preference number: 1 (lower is better) Translates to: AQPLRTLAALVETWV*FPASTRWLTHPVIP Trigger: TGGAATTACAGGGTGTGTGAGCCACCGTGTGGATGCTGGGAACCAAACCCAGGTCTCTACAAGGGCAGCCAGTGTTCTTAACGGCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 90 bp | ATGGGCAAGAAAACTCTGCCAATGCTTTGTAAACAAGGCCCTCCCTaGACAGAGCTACCCCTTCAGCCCGGGCCACTGGCTCTCTTATTC | + |
|
Preference number: 1 (lower is better) Translates to: MGKKTLPMLCKQGPP*TELPLQPGPLALLF Trigger: GAATAAGAGAGCCAGTGGCCCGGGCTGAAGGGGTAGCTCTGTGCAGGGAGGGCCTTGTTTACAAAGCATTGGCAGAGTTTTCTTGCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 90 bp | GATGGGACGATGAAACAACTGTGCACACACCAGCCCCTGTGCTGCTaGCCCAGAGCTCCTGTTTCCTACTGTGTGCAGAGTAACATGCTT | + |
|
Preference number: 1 (lower is better) Translates to: DGTMKQLCTHQPLCC*PRAPVSYCVQSNML Trigger: AAGCATGTTACTCTGCACACAGTAGGAAACAGGAGCTCTGGGGCAGCAGCACAGGGGCTGGTGTGTGCACAGTTGTTTCATCGTCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | GGCCTCCTCGGGCACTGCATGCATGTGGTATACAGACATGCGTGCTaGCAGAATGCTCGCTCACATGCAGAAGAGGGGAAAGGTTCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: GLLGHCMHVVYRHAC*QNARSHAEEGKGSF Trigger: AAAAGAACCTTTCCCCTCTTCTGCATGTGAGCGAGCATTCTGCCAGCACGCATGTCTGTATACCACATGCATGCAGTGCCCGAGGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | TGCCATGTCTGCTATGCTCCGCTGTGTGTGCAATGGTCAGCCTGCTaGGGCCCTTCACTCCCTCTCAGAAGAAAGGGGGAAATTTACAGT | + |
|
Preference number: 1 (lower is better) Translates to: CHVCYAPLCVQWSAC*GPSLPLRRKGEIYS Trigger: ACTGTAAATTTCCCCCTTTCTTCTGAGAGGGAGTGAAGGGCCCCAGCAGGCTGACCATTGCACACACAGCGGAGCATAGCAGACATGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 90 bp | TGGGGTCACTCTACTGAAGGATGGAACTCATGGGTGGAAGGCCTGTaGTGTCACCTGTTCCTAACCTGCGTAACTAGGAGGCCACAGCTT | + |
|
Preference number: 1 (lower is better) Translates to: WGHSTEGWNSWVEGL*CHLFLTCVTRRPQL Trigger: AAGCTGTGGCCTCCTAGTTACGCAGGTTAGGAACAGGTGACATCACAGGCCTTCCACCCATGAGTTCCATCCTTCAGTAGAGTGACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 90 bp | CGGGCACTGCATGCATGTGGTATACAGACATGCGTGCTGGCAGAATaGTCGCTCACATGCAGAAGAGGGGAAAGGTTCTTTTGCATTCGC | + |
|
Preference number: 1 (lower is better) Translates to: RALHACGIQTCVLAE*SLTCRRGERFFCIR Trigger: GCGAATGCAAAAGAACCTTTCCCCTCTTCTGCATGTGAGCGAGCATTCTGCCAGCACGCATGTCTGTATACCACATGCATGCAGTGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | CTAGTCCCACTGCATGCACAAGTTCATAGGTTCTGTTTGTGGGGTTaGAGGGATGGCTCAGCCGTTAAGAACACTGGCTGCCCTTGTAGA | + |
|
Preference number: 1 (lower is better) Translates to: LVPLHAQVHRFCLWG*RDGSAVKNTGCPCR Trigger: TCTACAAGGGCAGCCAGTGTTCTTAACGGCTGAGCCATCCCTCCAACCCCACAAACAGAACCTATGAACTTGTGCATGCAGTGGGACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 90 bp | CTCTCAAGTGAGGCAAGGAGGAGGTTACCTGGGCAGACTCCTGCCTaGTCCTGTAGTGTATCTAAGGAAGGAAGCCTCATGAACTCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: LSSEARRRLPGQTPA*SCSVSKEGSLMNSD Trigger: ATCTGAGTTCATGAGGCTTCCTTCCTTAGATACACTACAGGATCAGGCAGGAGTCTGCCCAGGTAACCTCCTCCTTGCCTCACTTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 90 bp | ACAATTCCAAACTACCAGTCAGTGCACGTATGGGCAAGAAAACTCTaGCAATGCTTTGTAAACAAGGCCCTCCCTGCACAGAGCTACCCC | + |
|
Preference number: 1 (lower is better) Translates to: TIPNYQSVHVWARKL*QCFVNKALPAQSYP Trigger: GGGGTAGCTCTGTGCAGGGAGGGCCTTGTTTACAAAGCATTGGCAGAGTTTTCTTGCCCATACGTGCACTGACTGGTAGTTTGGAATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 90 bp | ATTCTGATAGCTAGACCTTGGTGCTCGGTCTCAGGAATGAGTCAGTaGCTGAATAAGGGGCCAGACCTTGGTAGTGAGCTTCAGGATCAA | + |
|
Preference number: 1 (lower is better) Translates to: ILIARPWCSVSGMSQ*LNKGPDLGSELQDQ Trigger: TTGATCCTGAAGCTCACTACCAAGGTCTGGCCCCTTATTCAGTCACTGACTCATTCCTGAGACCGAGCACCAAGGTCTAGCTATCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | ATTCCACTCAAAGTGACAATTCCAAACTACCAGTCAGTGCACGTATaGGCAAGAAAACTCTGCCAATGCTTTGTAAACAAGGCCCTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: IPLKVTIPNYQSVHV*ARKLCQCFVNKALP Trigger: AGGGAGGGCCTTGTTTACAAAGCATTGGCAGAGTTTTCTTGCCCATACGTGCACTGACTGGTAGTTTGGAATTGTCACTTTGAGTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 90 bp | CTTCACTCCCTCTCAGAAGAAAGGGGGAAATTTACAGTAATCAGATaGATCCAAGAGTTTAGAGAGTCGGGCTTATGTCTCCTGAAAAGA | + |
|
Preference number: 1 (lower is better) Translates to: LHSLSEERGKFTVIR*IQEFRESGLCLLKR Trigger: TCTTTTCAGGAGACATAAGCCCGACTCTCTAAACTCTTGGATTCATCTGATTACTGTAAATTTCCCCCTTTCTTCTGAGAGGGAGTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | TTAGTTGTTTATTTTAAGCATTTATCAATAATCAGTCCCAGCTACTaGGAGGCTGAAACAGCTGAAGACCAGCATTGGCAACAGAGTCAG | + |
|
Preference number: 1 (lower is better) Translates to: LVVYFKHLSIISPSY*EAETAEDQHWQQSQ Trigger: CTGACTCTGTTGCCAATGCTGGTCTTCAGCTGTTTCAGCCTCCCAGTAGCTGGGACTGATTATTGATAAATGCTTAAAATAAACAACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | CTTGTTTCTCAACTACATTTCTCTGTACCTCTGGCATTTCTGTTTTaGTTTGGCCTTCAAGTGAAGATTCCTCTGATTAAAACTTCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: LVSQLHFSVPLAFLF*FGLQVKIPLIKTSR Trigger: TCTGGAAGTTTTAATCAGAGGAATCTTCACTTGAAGGCCAAACCAAAACAGAAATGCCAGAGGTACAGAGAAATGTAGTTGAGAAACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 90 bp | TCTATATTTAATAAGAAAACAGTAGAAATGTACTATTATTATTATTaGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGAGACCA | + |
|
Preference number: 1 (lower is better) Translates to: SIFNKKTVEMYYYYY*GPVCVCVCVCMKRP Trigger: TGGTCTCTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTACATTTCTACTGTTTTCTTATTAAATATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGAGCATGGCAGCTGTCTaGTCTAGTCCCACTGCATGC | + |
|
Preference number: 2 (lower is better) Translates to: GPGRMSQSGISDGHVLPGSMAAV*SSPTAC Trigger: GCATGCAGTGGGACTAGAGCAGACAGCTGCCATGCT...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGACGATGAAACAACTGTaGACACACCAGCCCCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GPGRMSQSGISDGHVLPGTMKQL*THQPLC Trigger: GCACAGGGGCTGGTGTGTGCACAGTTGTTTCATCGT...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGTTCAGCCCGGGCCACTaGCTCTCTTATTCTGTACAC | + |
|
Preference number: 2 (lower is better) Translates to: GPGRMSQSGISDGHVLPGFSPGH*LSYSVH Trigger: GTGTACAGAATAAGAGAGCCAGTGGCCCGGGCTGAA...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 90 bp | ACATACTCCTGGGCGGCTGCTTGTTTTAGGCCTCCGTGTGCCTGCTaGACTGCTTGTGGGTGCTGGTTTCCCTACTCCACCCCACTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: TYSWAAACFRPPCAC*TACGCWFPYSTPLG Trigger: ACCAAGTGGGGTGGAGTAGGGAAACCAGCACCCACAAGCAGTCAAGCAGGCACACGGAGGCCTAAAACAAGCAGCCGCCCAGGAGTATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACGGGACCTGTGCACTGTaGGATGCTCCCCTCTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: LVRREGWRERTCDLLTTDGTCAL*DAPLWT Trigger: GGTCCAGAGGGGAGCATCCCACAGTGCACAGGTCCC...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 90 bp | GGAGGCCAGAGCCAAGACCACTATGCAAATGACAGGCCCAGTTCTTaGCCTGCCTCTCAAGTGAGGCAAGGAGGAGGTTACCTGGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GGQSQDHYANDRPSS*PASQVRQGGGYLGR Trigger: TCTGCCCAGGTAACCTCCTCCTTGCCTCACTTGAGAGGCAGGCAAAGAACTGGGCCTGTCATTTGCATAGTGGTCTTGGCTCTGGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCACACACCAGCCCCTGTaGTGCTGCCCCAGAGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SCFSSRSQERQLLEKMSSTHQPL*CCPRAP Trigger: AGGAGCTCTGGGGCAGCAGCACAGGGGCTGGTGTGT...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACCATGCGGCCCCTGTCTaGGATCCTCCTTCCTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LVRREGWRERTCDLLTTDHAAPV*DPPSWL Trigger: TAACCAGGAAGGAGGATCTCAGACAGGGGCCGCATG...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGCTGTTTCCTACTGTGTaGAGAGTAACATGCTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GPGRMSQSGISDGHVLPGLFPTV*RVTCFL Trigger: CAGGAAGCATGTTACTCTGCACACAGTAGGAAACAG...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGTGTTTCTGTTTCCTATaGATCCTCCTGCATCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GPGRMSQSGISDGHVLPGCFCFL*ILLHQP Trigger: AGGCTGATGCAGGAGGATCCATAGGAAACAGAAACA...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGGTGTGTGTGTGTGTGTaGTATTTTCATCATACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GPGRMSQSGISDGHVLPGVCVCV*YFHHTF Trigger: GAAAGTATGATGAAAATATCACACACACACACACAC...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCGAGGACTTCAAAGGCTaGAGGCTGCTGCTAACTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SCFSSRSQERQLLEKMSSEDFKG*RLLLTK Trigger: CTTAGTTAGCAGCAGCCTTCAGCCTTTGAAGTCCTC...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACCGGGCTTATGTCTCCTaGAAAGAGCGTGATGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: LVRREGWRERTCDLLTTDRAYVS*KERDAF Trigger: AAATGCATCACGCTCTTTTCAGGAGACATAAGCCCG...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGCAGCCCCTGTGCTGCTaGCCCAGAGCTCCTGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKQPLCC*PRAPVS Trigger: GGAAACAGGAGCTCTGGGGCAGCAGCACAGGGGCTG...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCGTACTGAAGGAAGAGTaGGGACTTCAAAGGCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SCFSSRSQERQLLEKMSSVLKEE*GLQRLK Trigger: CTTCAGCCTTTGAAGTCCTCACTCTTCCTTCAGTAC...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGCTCCGTGTGCCTGCTTaGCTGCTTGTGGGTGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKLRVPA*LLVGAG Trigger: ACCAGCACCCACAAGCAGTCAAGCAGGCACACGGAG...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCCAGTCAGTGCACGTATaGGCAAGAAAACTCTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SCFSSRSQERQLLEKMSSQSVHV*ARKLCQ Trigger: TTGGCAGAGTTTTCTTGCCCATACGTGCACTGACTG...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCACCCAGGCTCTCCTGTaGAGGCCCCGGCAGGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: TLSNKTKTLESWNSPDSSTQALL*RPRQDV Trigger: GACATCCTGCCGGGGCCTTCACAGGAGAGCCTGGGT...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCCACCAGCCCCTGTGCTaGTGCCCCAGAGCTCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TLSNKTKTLESWNSPDSSHQPLC*CPRAPV Trigger: AACAGGAGCTCTGGGGCAGCAGCACAGGGGCTGGTG...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGCATAATCACACGTATAATCGTGGCACAAAAATGATAAAGTGGGTGCACGTAGAGACCTGGGTTTaGTTCCCAGCATCCACACGG | + |
|
Preference number: 2 (lower is better) Translates to: ALHNHTYNRGTKMIKWVHVETWV*FPASTR Trigger: CCGTGTGGATGCTGGGAACCAAACCCAGGTCTCTAC...GTGCACCCACTTTATCATTTTTGTGCCACGATTATACGTGTGATTATGCAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGTCAGGAATGAGTCAGTaGCTGAATAAGGGGCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKSGMSQ*LNKGPD Trigger: GTCTGGCCCCTTATTCAGTCACTGACTCATTCCTGA...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | CCAATGCATCCTTCAACTTGGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGAGAATGCTCGCTCACATaGAGAAGAGGGGAAAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PMHPSTWSYFLLLWWTLRECSLT*RRGERF Trigger: GAACCTTTCCCCTCTTCTGCATGTGAGCGAGCATTC...TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGTGTGGTATACAGACATaGGTGCTGGCAGAATGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKCGIQT*VLAECS Trigger: CGAGCATTCTGCCAGCACGCATGTCTGTATACCACA...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | CCAATGCATCCTTCAACTTGGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGAGTTAAGAACACTGGCTaGCCTTGTAGAGACCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PMHPSTWSYFLLLWWTLRVKNTG*PCRDLG Trigger: ACCCAGGTCTCTACAAGGGCAGCCAGTGTTCTTAAC...TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGCATAATCACACGTATAATCGTGGCACAAAAATGATAAAGTGGGTGCACTTCTGTTTGTGGGGTTaGAGGGATGGCTCAGCCGTT | + |
|
Preference number: 2 (lower is better) Translates to: ALHNHTYNRGTKMIKWVHFCLWG*RDGSAV Trigger: AACGGCTGAGCCATCCCTCCAACCCCACAAACAGAA...GTGCACCCACTTTATCATTTTTGTGCCACGATTATACGTGTGATTATGCAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGCATACTTTCAGCAGCTaGGGGGCATTTGGGCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKHTFSS*GAFGLF Trigger: AAACAGCCCAAATGCCCCCCAGCTGCTGAAAGTATG...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCCGCAGGCCTGTACTGTaGGTGCATGAGGACTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TLSNKTKTLESWNSPDSSRRPVL*VHEDSR Trigger: TCTGGAGTCCTCATGCACCCACAGTACAGGCCTGCG...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCATCTGTGCCGTCTACTaGCAGCTTGTGAGGAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLSNKTKTLESWNSPDSSICAVY*QLVRRE Trigger: CTCCCTCCTCACAAGCTGTCAGTAGACGGCACAGAT...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCGGCTCTTCCCATCATTaGAAAGGAAGCAGGAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TLSNKTKTLESWNSPDSSGSSHH*KGSRRG Trigger: GCCTCTCCTGCTTCCTTTGCAATGATGGGAAGAGCC...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCGACAAAACCTGTCAGTaGCATGTCTGCTATGCTCCG | + |
|
Preference number: 2 (lower is better) Translates to: TLSNKTKTLESWNSPDSSDKTCQ*HVCYAP Trigger: CGGAGCATAGCAGACATGGCACTGACAGGTTTTGTC...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGAGAGATGAGACAAGGTaGCTGAGTCTGAATTACACA | + |
|
Preference number: 2 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKRDETR*LSLNYT Trigger: TGTGTAATTCAGACTCAGCCACCTTGTCTCATCTCT...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGCATAATCACACGTATAATCGTGGCACAAAAATGATAAAGTGGGTGCACAGCCAGCAGACTGTATaGTCATACCTTGTTTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ALHNHTYNRGTKMIKWVHSQQTV*SYLVSQ Trigger: TTGAGAAACAAGGTATGATCATACAGTCTGCTGGCT...GTGCACCCACTTTATCATTTTTGTGCCACGATTATACGTGTGATTATGCAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGTTTCTGTTTGATTTTTaGGATAGGGCCTTGCTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKFLFDF*DRALLV Trigger: GACTAGCAAGGCCCTATCTCAAAAATCAAACAGAAA...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTGCATAATCACACGTATAATCGTGGCACAAAAATGATAAAGTGGGTGCACAGAAAACTCTGCCAATaGTTTGTAAACAAGGCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: ALHNHTYNRGTKMIKWVHRKLCQ*FVNKAL Trigger: GAGGGCCTTGTTTACAAAGCATTGGCAGAGTTTTCT...GTGCACCCACTTTATCATTTTTGTGCCACGATTATACGTGTGATTATGCAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | CCAATGCATCCTTCAACTTGGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGAAAGCAAGTTTGTTCATaGAAGGAAGAGTCTCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: PMHPSTWSYFLLLWWTLRKQVCS*KEESLS Trigger: ACTGAGAGACTCTTCCTTCCATGAACAAACTTGCTT...TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 90 bp | TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTTaGAAATACAACAAGAGGATTGAATGGGGTTCTTTCTGTTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: SFLPSFLPSFLPSFF*KYNKRIEWGSFCLI Trigger: AATCAAACAGAAAGAACCCCATTCAATCCTCTTGTTGTATTTCAAAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CCA 90 bp | CCAATGCATCCTTCAACTTGGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGAATTTCTGTTTTGGTTTaGCCTTCAAGTGAAGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: PMHPSTWSYFLLLWWTLRISVLV*PSSEDS Trigger: GGAATCTTCACTTGAAGGCCAAACCAAAACAGAAAT...TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR TCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCTCATTCCACTCAAAGTaGCAATTCCAAACTACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TLSNKTKTLESWNSPDSSSFHSK*QFQTTS Trigger: ACTGGTAGTTTGGAATTGTCACTTTGAGTGGAATGA...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR GCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCTGGGCAAGAAAACTCTaGCAATGCTTTGTAAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLSNKTKTLESWNSPDSSWARKL*QCFVNK Trigger: CTTGTTTACAAAGCATTGGCAGAGTTTTCTTGCCCA...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | CCTGTCAGTGCCATGTCTGCTATGCTCCGCTGTGTGTaGAATGGTCAGCCTGCTGGGGCCCTTCACTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PVSAMSAMLRCV*NGQPAGALHSL Trigger: GAGGGAGTGAAGGGCCCCAGCAGGCTGACCATTGCACACACAGCGGAGCATAGCAGACATGGCACTGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 72 bp | GAGGGTGACCAGCACGGTGTGCCCATGATGGGACGATaGAACAACTGTGCACACACCAGCCCCTGTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EGDQHGVPMMGR*NNCAHTSPCAA Trigger: AGCAGCACAGGGGCTGGTGTGTGCACAGTTGTTTCATCGTCCCATCATGGGCACACCGTGCTGGTCACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | GTCTGCTATGCTCCGCTGTGTGTGCAATGGTCAGCCTaGTGGGGCCCTTCACTCCCTCTCAGAAGAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VCYAPLCVQWSA*WGPSLPLRRKG Trigger: CCCCTTTCTTCTGAGAGGGAGTGAAGGGCCCCAGCAGGCTGACCATTGCACACACAGCGGAGCATAGCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | TCCTGGGCGGCTGCTTGTTTTAGGCCTCCGTGTGCCTaGTTGACTGCTTGTGGGTGCTGGTTTCCCTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SWAAACFRPPCA*LTACGCWFPYS Trigger: GGAGTAGGGAAACCAGCACCCACAAGCAGTCAAGCAGGCACACGGAGGCCTAAAACAAGCAGCCGCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | CAGTGCCATGTCTGCTATGCTCCGCTGTGTGTGCAATaGTCAGCCTGCTGGGGCCCTTCACTCCCTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QCHVCYAPLCVQ*SACWGPSLPLR Trigger: TCTGAGAGGGAGTGAAGGGCCCCAGCAGGCTGACCATTGCACACACAGCGGAGCATAGCAGACATGGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGATAAGGGGCCAGACCTaGGTAGTGAGCTTCAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: GPGRMSQSGISDGHVLPGIRGQT*VVSFRI Trigger: GATCCTGAAGCTCACTACCAAGGTCTGGCCCCTTAT...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | TGCTATGCTCCGCTGTGTGTGCAATGGTCAGCCTGCTaGGGCCCTTCACTCCCTCTCAGAAGAAAGGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CYAPLCVQWSAC*GPSLPLRRKGE Trigger: TTCCCCCTTTCTTCTGAGAGGGAGTGAAGGGCCCCAGCAGGCTGACCATTGCACACACAGCGGAGCATAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 72 bp | GCTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTaGCTTACTAACTACAGACCACCACCTACCCTAGCG | + |
|
Preference number: 3 (lower is better) Translates to: ACEEGGMEGAHM*LTNYRPPPTLA Trigger: CGCTAGGGTAGGTGGTGGTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 72 bp | GCCTCTTACAGATCTGTGCCGTCTACTGACAGCTTGTaGGGAGGGAGGGATGGAGGGAGCGCACATGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: ASYRSVPSTDSL*GGRDGGSAHVT Trigger: AGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAGCTGTCAGTAGACGGCACAGATCTGTAAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 72 bp | CAAATGACAGGCCCAGTTCTTTGCCTGCCTCTCAAGTaGGGCAAGGAGGAGGTTACCTGGGCAGACTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QMTGPVLCLPLK*GKEEVTWADSC Trigger: GCAGGAGTCTGCCCAGGTAACCTCCTCCTTGCCTCACTTGAGAGGCAGGCAAAGAACTGGGCCTGTCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | GGTTGGAGGGATGGCTCAGCCGTTAAGAACACTGGCTaGCCTTGTAGAGACCTGGGTTTGGTTCCCAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: GWRDGSAVKNTG*PCRDLGLVPSI Trigger: GATGCTGGGAACCAAACCCAGGTCTCTACAAGGGCAGCCAGTGTTCTTAACGGCTGAGCCATCCCTCCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | TTTAGGCCTCCGTGTGCCTGCTTGACTGCTTGTGGGTaGTGGTTTCCCTACTCCACCCCACTTGGTGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: FRPPCACLTACG*WFPYSTPLGEL Trigger: GAGTTCACCAAGTGGGGTGGAGTAGGGAAACCAGCACCCACAAGCAGTCAAGCAGGCACACGGAGGCCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | ATGTCCTCTCTGGCCTCCTCGGGCACTGCATGCATGTaGTATACAGACATGCGTGCTGGCAGAATGCTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: MSSLASSGTACM*YTDMRAGRMLA Trigger: AGCGAGCATTCTGCCAGCACGCATGTCTGTATACCACATGCATGCAGTGCCCGAGGAGGCCAGAGAGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | GTAGAGACCTGGGTTTGGTTCCCAGCATCCACACGGTaGCTCACACACCCTGTAATTCCAGAACCAGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VETWVWFPASTR*LTHPVIPEPGD Trigger: GTCCCCTGGTTCTGGAATTACAGGGTGTGTGAGCCACCGTGTGGATGCTGGGAACCAAACCCAGGTCTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | CAGCCGTTAAGAACACTGGCTGCCCTTGTAGAGACCTaGGTTTGGTTCCCAGCATCCACACGGTGGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QPLRTLAALVET*VWFPASTRWLT Trigger: TGTGAGCCACCGTGTGGATGCTGGGAACCAAACCCAGGTCTCTACAAGGGCAGCCAGTGTTCTTAACGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | CCTCCTCGGGCACTGCATGCATGTGGTATACAGACATaGGTGCTGGCAGAATGCTCGCTCACATGCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPRALHACGIQT*VLAECSLTCRR Trigger: TCTTCTGCATGTGAGCGAGCATTCTGCCAGCACGCATGTCTGTATACCACATGCATGCAGTGCCCGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | CTCCCTGCACAGAGCTACCCCTTCAGCCCGGGCCACTaGCTCTCTTATTCTGTACACAAGTATGAGGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPAQSYPFSPGH*LSYSVHKYEVW Trigger: CCAAACCTCATACTTGTGTACAGAATAAGAGAGCCAGTGGCCCGGGCTGAAGGGGTAGCTCTGTGCAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | TTAAGAACACTGGCTGCCCTTGTAGAGACCTGGGTTTaGTTCCCAGCATCCACACGGTGGCTCACACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRTLAALVETWV*FPASTRWLTHP Trigger: AGGGTGTGTGAGCCACCGTGTGGATGCTGGGAACCAAACCCAGGTCTCTACAAGGGCAGCCAGTGTTCTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | CGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTaGAGAAAATGTCCAGCCACAGCTTCAGGGTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RALVAGARRGSY*RKCPATASGSS Trigger: GCTGGACCCTGAAGCTGTGGCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACGGGCTCTTCCCATCATaGCAAAGGAAGCAGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVRREGWRERTCDLLTTDGLFPS*QRKQER Trigger: CCTCTCCTGCTTCCTTTGCAATGATGGGAAGAGCCC...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACTGTAGAGACCTGGGTTaGGTTCCCAGCATCCACACG | + |
|
Preference number: 3 (lower is better) Translates to: LVRREGWRERTCDLLTTDCRDLG*VPSIHT Trigger: CGTGTGGATGCTGGGAACCAAACCCAGGTCTCTACA...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 72 bp | GAGGCAAGGAGGAGGTTACCTGGGCAGACTCCTGCCTaGTCCTGTAGTGTATCTAAGGAAGGAAGCCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: EARRRLPGQTPA*SCSVSKEGSLM Trigger: CATGAGGCTTCCTTCCTTAGATACACTACAGGATCAGGCAGGAGTCTGCCCAGGTAACCTCCTCCTTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 72 bp | GCTAGACCTTGGTGCTCGGTCTCAGGAATGAGTCAGTaGCTGAATAAGGGGCCAGACCTTGGTAGTGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ARPWCSVSGMSQ*LNKGPDLGSEL Trigger: AAGCTCACTACCAAGGTCTGGCCCCTTATTCAGTCACTGACTCATTCCTGAGACCGAGCACCAAGGTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 72 bp | GTGTGCAGAGTAACATGCTTCCTGCCGCCATGGCAGTaGCAATGTGTGGACAGCATGTCTTACAGGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VCRVTCFLPPWQ*QCVDSMSYRRE Trigger: CTCTCTCCTGTAAGACATGCTGTCCACACATTGTCACTGCCATGGCGGCAGGAAGCATGTTACTCTGCACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | CTGCATGCACAAGTTCATAGGTTCTGTTTGTGGGGTTaGAGGGATGGCTCAGCCGTTAAGAACACTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LHAQVHRFCLWG*RDGSAVKNTGC Trigger: GCAGCCAGTGTTCTTAACGGCTGAGCCATCCCTCCAACCCCACAAACAGAACCTATGAACTTGTGCATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | CAGTCAGTGCACGTATGGGCAAGAAAACTCTGCCAATaGTTTGTAAACAAGGCCCTCCCTGCACAGAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QSVHVWARKLCQ*FVNKALPAQSY Trigger: GTAGCTCTGTGCAGGGAGGGCCTTGTTTACAAAGCATTGGCAGAGTTTTCTTGCCCATACGTGCACTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCAGGGGAAAGGTTCTTTaGCATTCGCCTAGGAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: SCFSSRSQERQLLEKMSSRGKVL*HSPRRL Trigger: TAGTCTCCTAGGCGAATGCAAAAGAACCTTTCCCCT...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | AACTACCAGTCAGTGCACGTATGGGCAAGAAAACTCTaGCAATGCTTTGTAAACAAGGCCCTCCCTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: NYQSVHVWARKL*QCFVNKALPAQ Trigger: CTGTGCAGGGAGGGCCTTGTTTACAAAGCATTGGCAGAGTTTTCTTGCCCATACGTGCACTGACTGGTAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | CATGCATGTGGTATACAGACATGCGTGCTGGCAGAATaGTCGCTCACATGCAGAAGAGGGGAAAGGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HACGIQTCVLAE*SLTCRRGERFF Trigger: AAAGAACCTTTCCCCTCTTCTGCATGTGAGCGAGCATTCTGCCAGCACGCATGTCTGTATACCACATGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACTCTGGCATTTCTGTTTaGGTTTGGCCTTCAAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LVRREGWRERTCDLLTTDSGISV*VWPSSE Trigger: TTCACTTGAAGGCCAAACCAAAACAGAAATGCCAGA...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGGGCCACAGCTTCCATTaGTCTGGGACATCTCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKGHSFH*SGTSHQ Trigger: TTGGTGAGATGTCCCAGACAAATGGAAGCTGTGGCC...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCAATACAACAAGAGGATaGAATGGGGTTCTTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SCFSSRSQERQLLEKMSSNTTRG*NGVLSV Trigger: AACAGAAAGAACCCCATTCAATCCTCTTGTTGTATT...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CCA 72 bp | GTGAGGGTTAATTTGCCCCCAATGCATCCTTCAACTTaGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: VRVNLPPMHPST*SYFLLLWWTLR Trigger: TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGGGGGCAAATTAACCCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | CCAATGCATCCTTCAACTTGGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGAGTACTATTATTATTATaGGGGGCCTGTGTGCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PMHPSTWSYFLLLWWTLRVLLLL*GACVRV Trigger: CACACGCACACAGGCCCCCAATAATAATAATAGTAC...TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | CCAATGCATCCTTCAACTTGGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGAGCTGGTAAGATCTGGTaGGTTATGTTAGTTAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PMHPSTWSYFLLLWWTLRAGKIW*VMLVRL Trigger: TAACCTAACTAACATAACCAACCAGATCTTACCAGC...TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR TCA 72 bp | GAATCCAAGAGTTTAGAGAGTCGGGCTTATGTCTCCTaGAAAGAGCGTGATGCATTTATAGGTTTTAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ESKSLESRAYVS*KERDAFIGFSK Trigger: CTTACTAAAACCTATAAATGCATCACGCTCTTTTCAGGAGACATAAGCCCGACTCTCTAAACTCTTGGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR GCA 72 bp | GGAAACTATGGAAGCTTTCACAGTAATCGCATTACTTaGGTGTATGCTTTGCATAATCACACGTATAATCGT | + |
|
Preference number: 3 (lower is better) Translates to: GNYGSFHSNRIT*VYALHNHTYNR Trigger: ACGATTATACGTGTGATTATGCAAAGCATACACGCAAGTAATGCGATTACTGTGAAAGCTTCCATAGTTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR-3UTR CAA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCTTATTAGACAAACTTTaGAAGCATAGGTTGCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TLSNKTKTLESWNSPDSSLLDKL*KHRLPG Trigger: ACCAGGCAACCTATGCTTCAAAAGTTTGTCTAATAA...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGAGGCCCCGGCACAGAGACTACAGGCCAGGGCAAATGTCAACGGAGCAGCGATGTCCTCCAGGTaGACATCGGGGTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGEAPAQRLQARANVNGAAMSSR*TSGSSS Trigger: AGAGCTGGACCCCGATGTCCACCTGGAGGACATCGC...TGCTCCGTTGACATTTGCCCTGGCCTGTAGTCTCTGTGCCGGGGCCTCTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGAGGCCCCGGCACAGAGACTACAGGCCAGGGCAAATGTCAACGGAGCAAGTCTTACCAGTGCCTaGGGGGCCAACCATCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGEAPAQRLQARANVNGASLTSA*GANHQH Trigger: GTGCTGATGGTTGGCCCCCCAGGCACTGGTAAGACT...TGCTCCGTTGACATTTGCCCTGGCCTGTAGTCTCTGTGCCGGGGCCTCTCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR GCA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGAGGGGGTGGCCATACTaGAGGGTCTCTAAACGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGRMSQSGISDGHVLPGRGWPY*RVSKRF Trigger: GAACCGTTTAGAGACCCTGCAGTATGGCCACCCCCT...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 72 bp | GTTAAGAACACTGGCTGCCCTTGTAGAGACCTGGGTTaGGTTCCCAGCATCCACACGGTGGCTCACACACCC | + |
|
Preference number: 4 (lower is better) Translates to: VKNTGCPCRDLG*VPSIHTVAHTP Trigger: GGGTGTGTGAGCCACCGTGTGGATGCTGGGAACCAAACCCAGGTCTCTACAAGGGCAGCCAGTGTTCTTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR TCA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACCGCGATTTGGACGCCTaGTTTGAGGGGGTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVRREGWRERTCDLLTTDRDLDA*FEGVLC Trigger: ACAGAGCACCCCCTCAAATCAGGCGTCCAAATCGCG...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR GCA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCCTGGTGACAGGCATCTaGAGCTCCTCCTTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCFSSRSQERQLLEKMSSLVTGI*SSSLDR Trigger: CCTGTCCAAGGAGGAGCTGCAGATGCCTGTCACCAG...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 72 bp | AAAATGTCCAGCCACAGCTTCAGGGTCCAGCACTACTaGGCAAGTCACGTAGCCTCCACCCACCATCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KMSSHSFRVQHY*ASHVASTHHLH Trigger: GTGTAGATGGTGGGTGGAGGCTACGTGACTTGCCAAGTAGTGCTGGACCCTGAAGCTGTGGCTGGACATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 72 bp | CTGCTTGTGGGTGCTGGTTTCCCTACTCCACCCCACTaGGTGAACTCCCTGAAAGTTAGACAGCTGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVGAGFPTPPH*VNSLKVRQLCD Trigger: GTCACACAGCTGTCTAACTTTCAGGGAGTTCACCAAGTGGGGTGGAGTAGGGAAACCAGCACCCACAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR TCA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCCTCCAGGTCTGCCGCTaGGACAGACTTGGCGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCFSSRSQERQLLEKMSSLQVCR*DRLGDF Trigger: AAAATCGCCAAGTCTGTCTCAGCGGCAGACCTGGAG...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CCA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCGGGTCTCTCAGTGACTaGCAGTGTCTCTGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCFSSRSQERQLLEKMSSGSLSD*QCLWIC Trigger: GCAGATCCAGAGACACTGCCAGTCACTGAGAGACCC...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CCA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACCCAACTCCATCCATCTaGATGAGGAGCTCCGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVRREGWRERTCDLLTTDPTPSI*MRSSDL Trigger: CAAGTCGGAGCTCCTCATCCAGATGGATGGAGTTGG...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 72 bp | AGCCAAGACCACTATGCAAATGACAGGCCCAGTTCTTaGCCTGCCTCTCAAGTGAGGCAAGGAGGAGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQDHYANDRPSS*PASQVRQGGGY Trigger: GTAACCTCCTCCTTGCCTCACTTGAGAGGCAGGCAAAGAACTGGGCCTGTCATTTGCATAGTGGTCTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 72 bp | AGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTaGCCTGGGGTCACTCTACTGAAGGATGGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RMSQSGISDGHV*PGVTLLKDGTH Trigger: ATGAGTTCCATCCTTCAGTAGAGTGACCCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR TCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGCCAAGTCCCCTCTGGTaGCAGGCATCTGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKPSPLW*QASAAP Trigger: AGGAGCTGCAGATGCCTGTCACCAGAGGGGACTTGG...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR GCA 90 bp | CAATGTCCTCTCTGGCCTCCTCGGGCACTGCATGCATGTGGTATACAGACATGCTCACTTGCACCATCTTaGACATTTTTCCTTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCPLWPPRALHACGIQTCSLAPS*TFFLAL Trigger: CAAGGCAAGGAAAAATGTGCAAGATGGTGCAAGTGA...GCATGTCTGTATACCACATGCATGCAGTGCCCGAGGAGGCCAGAGAGGACATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR GCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCTCCTGCCGTACCTGCTaGCACTTGGCTTTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSNKTKTLESWNSPDSSSCRTC*HLALVA Trigger: GGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGA...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGGACTGGCAGTGTCTCTaGATCTGCTGTATCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKDWQCL*ICCITP Trigger: GGGAGTGATACAGCAGATCCAGAGACACTGCCAGTC...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CCA 90 bp | GCTTTGCATAATCACACGTATAATCGTGGCACAAAAATGATAAAGTGGGTGCACAGTCAGGCATCCACATaGGCAGGACAACAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALHNHTYNRGTKMIKWVHSQAST*AGQQLP Trigger: GGGAAGCTGTTGTCCTGCCCATGTGGATGCCTGACT...GTGCACCCACTTTATCATTTTTGTGCCACGATTATACGTGTGATTATGCAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 72 bp | ATGCTCGCTCACATGCAGAAGAGGGGAAAGGTTCTTTaGCATTCGCCTAGGAGACTAGTCTTGTTTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: MLAHMQKRGKVL*HSPRRLVLFGT Trigger: AGTTCCAAACAAGACTAGTCTCCTAGGCGAATGCAAAAGAACCTTTCCCCTCTTCTGCATGTGAGCGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CCA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGCAGCACACCCTTCCATaGCCTTCTAATCCCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKQHTLP*PSNPFE Trigger: TTCAAAGGGATTAGAAGGCCATGGAAGGGTGTGCTG...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| 3UTR CAA 72 bp | ATAGGCTCGAGAATCAGGATATTATTAGACAAACTTTaGAAGCATAGGTTGCCTGGTGATCCAGAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGSRIRILLDKL*KHRLPGDPEGQ Trigger: CTGCCCTTCTGGATCACCAGGCAACCTATGCTTCAAAAGTTTGTCTAATAATATCCTGATTCTCGAGCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CCA 90 bp | ACATTAAGCAACAAAACAAAGACACTAGAAAGCTGGAATAGTCCAGATTCTTCCCCGCTGAGACAGACTTaGCGATTTTCTTCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSNKTKTLESWNSPDSSPLRQT*RFSSEP Trigger: TGGCTCTGAAGAAAATCGCCAAGTCTGTCTCAGCGG...GGAAGAATCTGGACTATTCCAGCTTTCTAGTGTCTTTGTTTTGTTGCTTAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCATAATCACACGTATAATCGTGGCACAAAAATGATAAAGTGGGTGCACTTGCACATTTTTCCTTaGCTTGTCATCTCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALHNHTYNRGTKMIKWVHLHIFP*LVISPS Trigger: AGAGGGAGAGATGACAAGGCAAGGAAAAATGTGCAA...GTGCACCCACTTTATCATTTTTGTGCCACGATTATACGTGTGATTATGCAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR GCA 90 bp | CCAATGCATCCTTCAACTTGGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGAAATCTCGCTGTCACTTaGACCATCTTGCACATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PMHPSTWSYFLLLWWTLRNLAVT*TILHIF Trigger: AAAAATGTGCAAGATGGTGCAAGTGACAGCGAGATT...TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS GCA 90 bp | ACTCTTCGATATCTGGTGTGCTCGGCCCACGAGTCCCCGGGCTCCTaGCCCCACGTCTTTCCGCAGAGGCCTCACTTCGCGATTTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: TLRYLVCSAHESPGS*PHVFPQRPHFAIWT Trigger: CGTCCAAATCGCGAAGTGAGGCCTCTGCGGAAAGACGTGGGGGCAGGAGCCCGGGGACTCGTGGGCCGAGCACACCAGATATCGAAGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS-3UTR CAA 90 bp | GGCCCCGGCAGGATGTCCCAGTCTGGCATTTCTGATGGCCATGTGTTGCCTGGGCGTACCTGCTGCCACTaGGCTTTGGTGGCCGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPGRMSQSGISDGHVLPGRTCCH*ALVAGS Trigger: AGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACG...CCCAGGCAACACATGGCCATCAGAAATGCCAGACTGGGACATCCTGCCGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS GCA 90 bp | GTCCTTGTCCCGACTTGCAGGTTTGTCACTCTTCGATATCTGGTGTaGTCGGCCCACGAGTCCCCGGGCTCCTGCCCCCACGTCTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VLVPTCRFVTLRYLV*SAHESPGSCPHVFP Trigger: CGGAAAGACGTGGGGGCAGGAGCCCGGGGACTCGTGGGCCGAGCACACCAGATATCGAAGAGTGACAAACCTGCAAGTCGGGACAAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS TCA 90 bp | TGTCCTCCAGGTGGACATCGGGGTCCAGCTCTACCTCCCGGAGGCTaGTCTTCAGGAGCTCCGCTCTTCCTTTTGCTGTCGGGAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CPPGGHRGPALPPGG*SSGAPLFLLLSGEE Trigger: TTCCTCTCCCGACAGCAAAAGGAAGAGCGGAGCTCCTGAAGATCAGCCTCCGGGAGGTAGAGCTGGACCCCGATGTCCACCTGGAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS CCA 90 bp | ACGCCTGATTTGAGGGGGTGCTCTGTGTTCCGCAGGGACAGGGGGTaGCCATACTGCAGGGTCTCTAAACGGTTCATCTCGGCAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: TPDLRGCSVFRRDRG*PYCRVSKRFISARH Trigger: GTGTCTTGCCGAGATGAACCGTTTAGAGACCCTGCAGTATGGCCACCCCCTGTCCCTGCGGAACACAGAGCACCCCCTCAAATCAGGCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS TCA 90 bp | CTGCCGTACCTGCTGCCACTTGGCTTTGGTGGCCGGGTCTCTCAGTaGCTGGCAGTGTCTCTGGATCTGCTGTATCACTCCCTGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LPYLLPLGFGGRVSQ*LAVSLDLLYHSLVI Trigger: TATTACCAGGGAGTGATACAGCAGATCCAGAGACACTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS TCA 90 bp | CAGACTTGGCGATTTTCTTCAGAGCCAACTCCAAGTCCCCTCTGGTaGCAGGCATCTGCAGCTCCTCCTTGGACAGGGCCCGGATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QTWRFSSEPTPSPLW*QASAAPPWTGPGSL Trigger: AAGAGATCCGGGCCCTGTCCAAGGAGGAGCTGCAGATGCCTGTCACCAGAGGGGACTTGGAGTTGGCTCTGAAGAAAATCGCCAAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CAA 90 bp | GCAGGAGAGGCCCCGGCACAGAGACTACAGGCCAGGGCAAATGTCAACGGAGCAGGCCTTCTAATCCCTTaGAAAAAGTCAGGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGEAPAQRLQARANVNGAGLLIP*KKSGIH Trigger: GTGGATGCCTGACTTTTTCAAAGGGATTAGAAGGCC...TGCTCCGTTGACATTTGCCCTGGCCTGTAGTCTCTGTGCCGGGGCCTCTCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CAA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACATCTGCAGCTCCTCCTaGGACAGGGCCCGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVRREGWRERTCDLLTTDICSSS*DRARIS Trigger: AGAGATCCGGGCCCTGTCCAAGGAGGAGCTGCAGAT...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS TCA 90 bp | CGGAGCAACTTCTTAGCCTCCTCCAGGTCTGCTATGTCATCCCAGTaGATGCTAGGGTTCCTGGACACAATGTCCCTCTCCAGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSNFLASSRSAMSSQ*MLGFLDTMSLSRAS Trigger: GGAAGCCCTGGAGAGGGACATTGTGTCCAGGAACCCTAGCATTCACTGGGATGACATAGCAGACCTGGAGGAGGCTAAGAAGTTGCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CCA 90 bp | ATTCTTCCAAGAGTTCCTGCCGTACCTGCTGCCACTTGGCTTTGGTaGCCGGGTCTCTCAGTGACTGGCAGTGTCTCTGGATCTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ILPRVPAVPAATWLW*PGLSVTGSVSGSAV Trigger: TACAGCAGATCCAGAGACACTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CCA 90 bp | CCTGTTCATATTCTTCCAAGAGTTCCTGCCGTACCTGCTGCCACTTaGCTTTGGTGGCCGGGTCTCTCAGTGACTGGCAGTGTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVHILPRVPAVPAAT*LWWPGLSVTGSVSG Trigger: TCCAGAGACACTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATATGAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 90 bp | CTCTTAACCTGTTCATATTCTTCCAAGAGTTCCTGCCGTACCTGCTaGCACTTGGCTTTGGTGGCCGGGTCTCTCAGTGACTGGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLTCSYSSKSSCRTC*HLALVAGSLSDWQC Trigger: ACACTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATATGAACAGGTTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 90 bp | TGCCTTGTCATCTCTCCCTCTTGCTCTATAGTCCTTGTCCCGACTTaGAGGTTTGTCACTCTTCGATATCTGGTGTGCTCGGCCCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLVISPSCSIVLVPT*RFVTLRYLVCSAHE Trigger: CTCGTGGGCCGAGCACACCAGATATCGAAGAGTGACAAACCTGCAAGTCGGGACAAGGACTATAGAGCAAGAGGGAGAGATGACAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS GCA 90 bp | TCCATCTGGATGAGGAGCTCCGACTTGACTCTGCGGCTTGCCTCGTaGTCATCAGACGTCCCTCTTCGACTGCAGATAGAATCAATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SIWMRSSDLTLRLAS*SSDVPLRLQIESIS Trigger: CGAAATTGATTCTATCTGCAGTCGAAGAGGGACGTCTGATGAGCACGAGGCAAGCCGCAGAGTCAAGTCGGAGCTCCTCATCCAGATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS CCA 90 bp | TTGGATGGGTCATCATTTTCTAAGGCTCCTCCAACTCCATCCATCTaGATGAGGAGCTCCGACTTGACTCTGCGGCTTGCCTCGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDGSSFSKAPPTPSI*MRSSDLTLRLASCS Trigger: TGAGCACGAGGCAAGCCGCAGAGTCAAGTCGGAGCTCCTCATCCAGATGGATGGAGTTGGAGGAGCCTTAGAAAATGATGACCCATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CAA 90 bp | CAATGTCCTCTCTGGCCTCCTCGGGCACTGCATGCATGTGGTATACAGACATGCTGTCATCTCTCCCTCTaGCTCTATAGTCCTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QCPLWPPRALHACGIQTCCHLSL*LYSPCP Trigger: GGGACAAGGACTATAGAGCAAGAGGGAGAGATGACA...GCATGTCTGTATACCACATGCATGCAGTGCCCGAGGAGGCCAGAGAGGACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS TCA 90 bp | CCCAAACTCAACCATCCACTTTTCGTACTTCTCCAGGTCTGCCGCTaGGACAGACTTGGCGATTTTCTTCAGAGCCAACTCCAAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PKLNHPLFVLLQVCR*DRLGDFLQSQLQVP Trigger: GGGGACTTGGAGTTGGCTCTGAAGAAAATCGCCAAGTCTGTCTCAGCGGCAGACCTGGAGAAGTACGAAAAGTGGATGGTTGAGTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS GCA 90 bp | ATACTCTTAACCTGTTCATATTCTTCCAAGAGTTCCTGCCGTACCTaGTGCCACTTGGCTTTGGTGGCCGGGTCTCTCAGTGACTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLTCSYSSKSSCRT*CHLALVAGSLSDWQ Trigger: CTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATATGAACAGGTTAAGAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 90 bp | GTGCTGACGATACTCTTAACCTGTTCATATTCTTCCAAGAGTTCCTaGCGTACCTGCTGCCACTTGGCTTTGGTGGCCGGGTCTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLTILLTCSYSSKSS*RTCCHLALVAGSLS Trigger: ACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATATGAACAGGTTAAGAGTATCGTCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CCA 90 bp | CCAGGGCTTCCACCAGATCCTTATCATACCCGGCGCCATCAAACTTaGGAATCTCGCTGTCACTTGCACCATCTTGCACATTTTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLPPDPYHTRRHQT*ESRCHLHHLAHFSL Trigger: CAAGGAAAAATGTGCAAGATGGTGCAAGTGACAGCGAGATTCCCAAGTTTGATGGCGCCGGGTATGATAAGGATCTGGTGGAAGCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS-3UTR CAA 90 bp | TCGTGCTTTAGTAGCAGGAGCCAGGAGAGGCAGTTACTGGAGAAAATGTCCAGCGGGAAGTCAGGGGGCTaGTCCATCTTAAAGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCFSSRSQERQLLEKMSSGKSGG*SILKLS Trigger: AGAAAGCTTTAAGATGGACAAGCCCCCTGACTTCCC...GCTGGACATTTTCTCCAGTAACTGCCTCTCCTGGCTCCTGCTACTAAAGCACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CAA 90 bp | CTTGTGAGGAGGGAGGGATGGAGGGAGCGCACATGTGACTTACTAACTACAGACGTCACTTGCACCATCTaGCACATTTTTCCTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVRREGWRERTCDLLTTDVTCTI*HIFPCL Trigger: AAGGCAAGGAAAAATGTGCAAGATGGTGCAAGTGAC...GTCTGTAGTTAGTAAGTCACATGTGCGCTCCCTCCATCCCTCCCTCCTCACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS TCA 90 bp | GCAGTGTCTCTGGATCTGCTGTATCACTCCCTGGTAATACACCATTaGCGAGTCATAATTTCCCAGAAGCGCATATTCCCGGCCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVSLDLLYHSLVIHH*RVIISQKRIFPAFL Trigger: AAGAAAGGCCGGGAATATGCGCTTCTGGGAAATTATGACTCGTCAATGGTGTATTACCAGGGAGTGATACAGCAGATCCAGAGACACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS-3UTR CAA 90 bp | CCAATGCATCCTTCAACTTGGTCCTATTTTCTTCTGTTGTGGTGGACTCTTAGACTTGCACATTTTTCCTaGCCTTGTCATCTCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PMHPSTWSYFLLLWWTLRLAHFS*PCHLSL Trigger: GAGGGAGAGATGACAAGGCAAGGAAAAATGTGCAAG...TCTAAGAGTCCACCACAACAGAAGAAAATAGGACCAAGTTGAAGGATGCATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS-3UTR CAA 90 bp | TACTATTATTATTATTGGGGGCCTGTGTGCGTGTGTGTGTGTGTGTGTATGAAGCCTGGTAATACACCATaGACGAGTCATAATTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YYYYYWGPVCVCVCVCMKPGNTP*TSHNFP Trigger: TGGGAAATTATGACTCGTCAATGGTGTATTACCAGG...CTTCATACACACACACACACACACGCACACAGGCCCCCAATAATAATAATAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS GCA 72 bp | TATCTGGTGTGCTCGGCCCACGAGTCCCCGGGCTCCTaGCCCCACGTCTTTCCGCAGAGGCCTCACTTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: YLVCSAHESPGS*PHVFPQRPHFA Trigger: CGCGAAGTGAGGCCTCTGCGGAAAGACGTGGGGGCAGGAGCCCGGGGACTCGTGGGCCGAGCACACCAGATA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 72 bp | CCGACTTGCAGGTTTGTCACTCTTCGATATCTGGTGTaGTCGGCCCACGAGTCCCCGGGCTCCTGCCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PTCRFVTLRYLV*SAHESPGSCPH Trigger: GTGGGGGCAGGAGCCCGGGGACTCGTGGGCCGAGCACACCAGATATCGAAGAGTGACAAACCTGCAAGTCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS TCA 72 bp | GGTGGACATCGGGGTCCAGCTCTACCTCCCGGAGGCTaGTCTTCAGGAGCTCCGCTCTTCCTTTTGCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GGHRGPALPPGG*SSGAPLFLLLS Trigger: CGACAGCAAAAGGAAGAGCGGAGCTCCTGAAGATCAGCCTCCGGGAGGTAGAGCTGGACCCCGATGTCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS GCA 72 bp | AGAGCCAACTCCAAGTCCCCTCTGGTGACAGGCATCTaGAGCTCCTCCTTGGACAGGGCCCGGATCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RANSKSPLVTGI*SSSLDRARISS Trigger: GGAAGAGATCCGGGCCCTGTCCAAGGAGGAGCTGCAGATGCCTGTCACCAGAGGGGACTTGGAGTTGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS CCA 72 bp | TTGTCCCGACTTGCAGGTTTGTCACTCTTCGATATCTaGTGTGCTCGGCCCACGAGTCCCCGGGCTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSRLAGLSLFDI*CARPTSPRAPA Trigger: GGCAGGAGCCCGGGGACTCGTGGGCCGAGCACACCAGATATCGAAGAGTGACAAACCTGCAAGTCGGGACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS TCA 72 bp | CTTTCCGCAGAGGCCTCACTTCGCGATTTGGACGCCTaGTTTGAGGGGGTGCTCTGTGTTCCGCAGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: LSAEASLRDLDA*FEGVLCVPQGQ Trigger: CTGTCCCTGCGGAACACAGAGCACCCCCTCAAATCAGGCGTCCAAATCGCGAAGTGAGGCCTCTGCGGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CCA 72 bp | AGAGTTCCTGCCGTACCTGCTGCCACTTGGCTTTGGTaGCCGGGTCTCTCAGTGACTGGCAGTGTCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVPAVPAATWLW*PGLSVTGSVSG Trigger: TCCAGAGACACTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CCA 72 bp | TTGAGGGGGTGCTCTGTGTTCCGCAGGGACAGGGGGTaGCCATACTGCAGGGTCTCTAAACGGTTCATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRGCSVFRRDRG*PYCRVSKRFIS Trigger: CGAGATGAACCGTTTAGAGACCCTGCAGTATGGCCACCCCCTGTCCCTGCGGAACACAGAGCACCCCCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CCA 72 bp | GGCAACCGCTTTAGCCAGCATAGTCTTACCAGTGCCTaGGGGGCCAACCATCAGCACACCCTTCCATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GNRFSQHSLTSA*GANHQHTLPWP Trigger: AGGCCATGGAAGGGTGTGCTGATGGTTGGCCCCCCAGGCACTGGTAAGACTATGCTGGCTAAAGCGGTTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS CAA 72 bp | TCCAAGAGTTCCTGCCGTACCTGCTGCCACTTGGCTTaGGTGGCCGGGTCTCTCAGTGACTGGCAGTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SKSSCRTCCHLA*VAGSLSDWQCL Trigger: GAGACACTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 72 bp | TGCTCTGTGTTCCGCAGGGACAGGGGGTGGCCATACTaGAGGGTCTCTAAACGGTTCATCTCGGCAAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: CSVFRRDRGWPY*RVSKRFISARH Trigger: GTGTCTTGCCGAGATGAACCGTTTAGAGACCCTGCAGTATGGCCACCCCCTGTCCCTGCGGAACACAGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 72 bp | CATCTGGATGAGGAGCTCCGACTTGACTCTGCGGCTTaGCTCGTGCTCATCAGACGTCCCTCTTCGACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HLDEELRLDSAA*LVLIRRPSSTA Trigger: TGCAGTCGAAGAGGGACGTCTGATGAGCACGAGGCAAGCCGCAGAGTCAAGTCGGAGCTCCTCATCCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS CAA 72 bp | TATTCTTCCAAGAGTTCCTGCCGTACCTGCTGCCACTaGGCTTTGGTGGCCGGGTCTCTCAGTGACTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YSSKSSCRTCCH*ALVAGSLSDWQ Trigger: CTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CAA 90 bp | ACCTGTTCATATTCTTCCAAGAGTTCCTGCCGTACCTGCTGCCACTaGGCTTTGGTGGCCGGGTCTCTCAGTGACTGGCAGTGTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TCSYSSKSSCRTCCH*ALVAGSLSDWQCLW Trigger: CCAGAGACACTGCCAGTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATATGAACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 72 bp | ATGAGGAGCTCCGACTTGACTCTGCGGCTTGCCTCGTaGTCATCAGACGTCCCTCTTCGACTGCAGATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: MRSSDLTLRLAS*SSDVPLRLQIE Trigger: TTCTATCTGCAGTCGAAGAGGGACGTCTGATGAGCACGAGGCAAGCCGCAGAGTCAAGTCGGAGCTCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS GCA 72 bp | TGTTCATATTCTTCCAAGAGTTCCTGCCGTACCTGCTaGCACTTGGCTTTGGTGGCCGGGTCTCTCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CSYSSKSSCRTC*HLALVAGSLSD Trigger: GTCACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATATGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 72 bp | ACCTGTTCATATTCTTCCAAGAGTTCCTGCCGTACCTaGTGCCACTTGGCTTTGGTGGCCGGGTCTCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TCSYSSKSSCRT*CHLALVAGSLS Trigger: ACTGAGAGACCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATATGAACAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS TCA 72 bp | TTCTTAGCCTCCTCCAGGTCTGCTATGTCATCCCAGTaGATGCTAGGGTTCCTGGACACAATGTCCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLASSRSAMSSQ*MLGFLDTMSLS Trigger: GGAGAGGGACATTGTGTCCAGGAACCCTAGCATTCACTGGGATGACATAGCAGACCTGGAGGAGGCTAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CCA 72 bp | TCATCATTTTCTAAGGCTCCTCCAACTCCATCCATCTaGATGAGGAGCTCCGACTTGACTCTGCGGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFSKAPPTPSI*MRSSDLTLRLA Trigger: GGCAAGCCGCAGAGTCAAGTCGGAGCTCCTCATCCAGATGGATGGAGTTGGAGGAGCCTTAGAAAATGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047257.15 |
||
| CDS CAA 90 bp | TTGCCTTGTCATCTCTCCCTCTTGCTCTATAGTCCTTGTCCCGACTaGCAGGTTTGTCACTCTTCGATATCTGGTGTGCTCGGCCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: LPCHLSLLLYSPCPD*QVCHSSISGVLGPR Trigger: TCGTGGGCCGAGCACACCAGATATCGAAGAGTGACAAACCTGCAAGTCGGGACAAGGACTATAGAGCAAGAGGGAGAGATGACAAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS GCA 72 bp | ATACTCTTAACCTGTTCATATTCTTCCAAGAGTTCCTaGCGTACCTGCTGCCACTTGGCTTTGGTGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ILLTCSYSSKSS*RTCCHLALVAG Trigger: CCCGGCCACCAAAGCCAAGTGGCAGCAGGTACGGCAGGAACTCTTGGAAGAATATGAACAGGTTAAGAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS GCA 72 bp | CCCGGCGCCATCAAACTTGGGAATCTCGCTGTCACTTaGACCATCTTGCACATTTTTCCTTGCCTTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PGAIKLGNLAVT*TILHIFPCLVI Trigger: GATGACAAGGCAAGGAAAAATGTGCAAGATGGTGCAAGTGACAGCGAGATTCCCAAGTTTGATGGCGCCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CCA 72 bp | CCACCAGATCCTTATCATACCCGGCGCCATCAAACTTaGGAATCTCGCTGTCACTTGCACCATCTTGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: PPDPYHTRRHQT*ESRCHLHHLAH Trigger: ATGTGCAAGATGGTGCAAGTGACAGCGAGATTCCCAAGTTTGATGGCGCCGGGTATGATAAGGATCTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CAA 72 bp | TCCACCAGATCCTTATCATACCCGGCGCCATCAAACTaGGGAATCTCGCTGTCACTTGCACCATCTTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: STRSLSYPAPSN*GISLSLAPSCT Trigger: TGTGCAAGATGGTGCAAGTGACAGCGAGATTCCCAAGTTTGATGGCGCCGGGTATGATAAGGATCTGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CAA 90 bp | CCTTATCATACCCGGCGCCATCAAACTTGGGAATCTCGCTGTCACTaGCACCATCTTGCACATTTTTCCTTGCCTTGTCATCTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PYHTRRHQTWESRCH*HHLAHFSLPCHLSL Trigger: GAGGGAGAGATGACAAGGCAAGGAAAAATGTGCAAGATGGTGCAAGTGACAGCGAGATTCCCAAGTTTGATGGCGCCGGGTATGATAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CAA 90 bp | TCCAGGGCTTCCACCAGATCCTTATCATACCCGGCGCCATCAAACTaGGGAATCTCGCTGTCACTTGCACCATCTTGCACATTTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRASTRSLSYPAPSN*GISLSLAPSCTFFL Trigger: AAGGAAAAATGTGCAAGATGGTGCAAGTGACAGCGAGATTCCCAAGTTTGATGGCGCCGGGTATGATAAGGATCTGGTGGAAGCCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS GCA 72 bp | ATCTCTCCCTCTTGCTCTATAGTCCTTGTCCCGACTTaGAGGTTTGTCACTCTTCGATATCTGGTGTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ISPSCSIVLVPT*RFVTLRYLVCS Trigger: CGAGCACACCAGATATCGAAGAGTGACAAACCTGCAAGTCGGGACAAGGACTATAGAGCAAGAGGGAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CAA 72 bp | GGTTCATCTCGGCAAGACACGGGGAAGTCAGGGGGCTaGTCCATCTTAAAGCTTTCTAAAGTGCTGACGATA | + |
|
Preference number: 6 (lower is better) Translates to: GSSRQDTGKSGG*SILKLSKVLTI Trigger: TATCGTCAGCACTTTAGAAAGCTTTAAGATGGACAAGCCCCCTGACTTCCCCGTGTCTTGCCGAGATGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CAA 72 bp | CATCTCTCCCTCTTGCTCTATAGTCCTTGTCCCGACTaGCAGGTTTGTCACTCTTCGATATCTGGTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HLSLLLYSPCPD*QVCHSSISGVL Trigger: GAGCACACCAGATATCGAAGAGTGACAAACCTGCAAGTCGGGACAAGGACTATAGAGCAAGAGGGAGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CAA 72 bp | ACCCGGCGCCATCAAACTTGGGAATCTCGCTGTCACTaGCACCATCTTGCACATTTTTCCTTGCCTTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TRRHQTWESRCH*HHLAHFSLPCH Trigger: ATGACAAGGCAAGGAAAAATGTGCAAGATGGTGCAAGTGACAGCGAGATTCCCAAGTTTGATGGCGCCGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 |
||
| CDS CAA 90 bp | GGCAGTGTCTCTGGATCTGCTGTATCACTCCCTGGTAATACACCATaGACGAGTCATAATTTCCCAGAAGCGCATATTCCCGGCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSVSGSAVSLPGNTP*TSHNFPEAHIPGLS Trigger: AGAAAGGCCGGGAATATGCGCTTCTGGGAAATTATGACTCGTCAATGGTGTATTACCAGGGAGTGATACAGCAGATCCAGAGACACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CAA 90 bp | TCTCTAAACGGTTCATCTCGGCAAGACACGGGGAAGTCAGGGGGCTaGTCCATCTTAAAGCTTTCTAAAGTGCTGACGATACTCTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: SLNGSSRQDTGKSGG*SILKLSKVLTILLT Trigger: GGTTAAGAGTATCGTCAGCACTTTAGAAAGCTTTAAGATGGACAAGCCCCCTGACTTCCCCGTGTCTTGCCGAGATGAACCGTTTAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS TCA 72 bp | CTGGATCTGCTGTATCACTCCCTGGTAATACACCATTaGCGAGTCATAATTTCCCAGAAGCGCATATTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LDLLYHSLVIHH*RVIISQKRIFP Trigger: CGGGAATATGCGCTTCTGGGAAATTATGACTCGTCAATGGTGTATTACCAGGGAGTGATACAGCAGATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||
| CDS CAA 72 bp | TCTGGATCTGCTGTATCACTCCCTGGTAATACACCATaGACGAGTCATAATTTCCCAGAAGCGCATATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSAVSLPGNTP*TSHNFPEAHIP Trigger: GGGAATATGCGCTTCTGGGAAATTATGACTCGTCAATGGTGTATTACCAGGGAGTGATACAGCAGATCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047257.15 ENSMUST00000110509.9 ENSMUST00000149169.3 |
||