Pregenerated sensors for KAT8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030801Ensembl transcript IDs: ENSMUST00000033070.9, ENSMUST00000205357.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTGGGGGCTGCCGCCACTaGCACTGGCCCAGGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFGGCRH*HWPRWK Trigger: CTTCCACCTGGGCCAGTGTCAGTGGCGGCAGCCCCC...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATCTCCGATCTCCACGGTaGCTTCTGGTTCGCCACGCG | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADLRSPR*LLVRHA Trigger: CGCGTGGCGAACCAGAAGTCACCGTGGAGATCGGAG...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | TACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTCGGGGGTGCCCACTTaGGGCAGACAGAGTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: YHPLASLRTSKVQCTSRFSGVPT*GRQSPL Trigger: CAGTGGACTCTGTCTGCCTCAAGTGGGCACCCCCGA...AAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTCTGCTGAATGCCAGGTaGTATCCGGCCGCCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFLLNAR*YPAAGT Trigger: TGTGCCGGCGGCCGGATAGCACCTGGCATTCAGCAG...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATATCTTGCGCTCTGGCTaGTCGGCCAGCTCACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADILRSG*SASSLR Trigger: CCTGAGTGAGCTGGCCGAGCAGCCAGAGCGCAAGAT...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATAGTGATCTTGCGCTCTaGCTGCTCGGCCAGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADSDLAL*LLGQLT Trigger: AGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACT...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | TACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTATAGATCTCCTTCCCTaGGGGCTGCCGCCACTGACA | + |
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Preference number: 4 (lower is better) Translates to: YHPLASLRTSKVQCTSRFIDLLP*GLPPLT Trigger: TGTCAGTGGCGGCAGCCCCCAGGGAAGGAGATCTAT...AAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATCTGGATCACTTCTGCTaGATGCCAGGTGCTATCCGG | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADLDHFC*MPGAIR Trigger: CCGGATAGCACCTGGCATTCAGCAGAAGTGATCCAG...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | TACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTATCACTTCTGCTGAATaGCAGGTGCTATCCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YHPLASLRTSKVQCTSRFITSAE*QVLSGR Trigger: GCGGCCGGATAGCACCTGGCATTCAGCAGAAGTGAT...AAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTCGCAGAGCCAAAGCTTaGGCTGCTTCCCATAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFRRAKA*AASHSP Trigger: AGGACTATGGGAAGCAGCCCAAGCTTTGGCTCTGCG...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTCTCCCCTACAGTTCCTaGAGTTGTTGCAGCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFLPYSS*SCCSNC Trigger: GCAGTTGCTGCAACAACTTCAGGAACTGTAGGGGAG...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTTTCCTTTTCCAAGGCTaGTGTGGTGGGGTCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFFLFQG*CGGVHL Trigger: GAGATGGACCCCACCACAGCAGCCTTGGAAAAGGAA...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTTCTTCTCGGCCTTCCTaGTCATTCACTCGAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFSSRPS*SFTRDW Trigger: CCAGTCTCGAGTGAATGACCAGGAAGGCCGAGAAGA...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCACCAAGGCTGCTGTGGTaGGGTCCATCTCTGCATAGG | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQAPRLLW*GPSLHR Trigger: CCTATGCAGAGATGGACCCCACCACAGCAGCCTTGG...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTTTTCCAAGGCTGCTGTaGTGGGGTCCATCTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFFPRLL*WGPSLH Trigger: ATGCAGAGATGGACCCCACCACAGCAGCCTTGGAAA...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATGTCCTCTGGGAAAGGTaGGAAATACCAGGCATCGAT | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADVLWER*EIPGID Trigger: ATCGATGCCTGGTATTTCTCACCTTTCCCAGAGGAC...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | TACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTCGAACTTCATGTATTTaGGGCAGTACTCGCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: YHPLASLRTSKVQCTSRFRTSCI*GSTRRA Trigger: GGCTCTGCGAGTACTGCCTCAAATACATGAAGTTCG...AAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTAGTAGCTTCTGTAGCTaGGTTTGCCCAGGTCACTCA | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFSSFCS*VCPGHS Trigger: TGAGTGACCTGGGCAAACTCAGCTACAGAAGCTACT...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCATTTGTGCTTCGGGGGTaGCCACTTGAGGCAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQAFVLRG*PLEADR Trigger: TCTGTCTGCCTCAAGTGGGCACCCCCGAAGCACAAA...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTTATACTGGGCACTTTTaGGGTGTTCCTCTACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFYTGHF*GVPLPA Trigger: AGCTGGTAGAGGAACACCTCAAAAGTGCCCAGTATA...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCAAGTTGTTGCAGCAACTaGAGCTGTAGCTCCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQASCCSN*SCSSLC Trigger: GCACAGGGAGCTACAGCTGCAGTTGCTGCAACAACT...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCACACTGTCTTGGTCAGTaGGAGTCGGTTCTTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQAHCLGQ*ESVLVH Trigger: GTGGACAAGAACCGACTCGCACTGACCAAGACAGTG...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTCTCAGAGTTCTTCTaGACGGCATCCTTCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADFSEFF*TASFTV Trigger: GACAGTGAAGGATGCCGTGCAGAAGAACTCTGAGAA...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCAAGCTTGACTTGTTTGTaGTTCGGGGGTGCCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQASLTCL*FGGAHL Trigger: CAAGTGGGCACCCCCGAAGCACAAACAAGTCAAGCT...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCAACTCAGTGGCTTCTCTaGGGAGCCTACAGTACTCTC | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQATQWLL*GAYSTL Trigger: GAGAGTACTGTAGGCTCCCCAGAGAAGCCACTGAGT...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATCTGATGATGTCATTCTaGGTGATGCTGGTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADLMMSF*VMLVIW Trigger: CCAGATGACCAGCATCACCCAGAATGACATCATCAG...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTACACAGATAACATGCTaGCCCTTCCAGTACTTGACC | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFTQITC*PFQYLT Trigger: GGTCAAGTACTGGAAGGGCCAGCATGTTATCTGTGT...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR TCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTCTTCTGCACATGGTTaGTCTCATCATGCTTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADSSAHG*SHHAFA Trigger: AGCGAAAGCATGATGAGATCAACCATGTGCAGAAGA...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCACATCCTTCACTGTCTTaGTCAGTGCGAGTCGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQAHPSLS*SVRVGS Trigger: AGAACCGACTCGCACTGACCAAGACAGTGAAGGATG...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTCATGCTTTCGCTTTTaGTTTCGAGTGATCTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADSCFRF*FRVILR Trigger: GCGCAAGATCACTCGAAACCAAAAGCGAAAGCATGA...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTAAATACAAGGTCTTGTaGTCCAGGAAAAGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFKYKVL*SRKSLA Trigger: GGCCAAGCTTTTCCTGGACCACAAGACCTTGTATTT...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTCACGTTGTTTCCATCTaGGGATTCCTTCTCCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFHVVSI*GFLLLR Trigger: TCTAAGGAGAAGGAATCCCCAGATGGAAACAACGTG...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTTGGTTGATCTCATCATaGTTTCGCTTTTGGTTTCGA | + |
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Preference number: 4 (lower is better) Translates to: TTLWHLCVPPKSSAPADFWLISS*FRFWFR Trigger: TCGAAACCAAAAGCGAAAGCATGATGAGATCAACCA...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR GCA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATATATCTTGTGGTCTTTaGCATCCACTTCATACACAG | + |
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Preference number: 4 (lower is better) Translates to: NTTLWHLCVPPKSSAPADISCGL*HPLHTQ Trigger: CTGTGTATGAAGTGGATGGCAAAGACCACAAGATAT...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCATCATTCACTCGAGACTaGATCACTTCTGCTGAATGC | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQASFTRD*ITSAEC Trigger: GCATTCAGCAGAAGTGATCCAGTCTCGAGTGAATGA...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCAGGTGGTTTCTTATACTaGGCACTTTTGAGGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQAGGFLY*ALLRCS Trigger: GGAACACCTCAAAAGTGCCCAGTATAAGAAACCACC...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CCA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCAGTCCACTGTGATAGGTaGTTTCTTATACTGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: QVCTHIYRLEARKPRSQAVHCDR*FLILGT Trigger: AGTGCCCAGTATAAGAAACCACCTATCACAGTGGAC...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CCA 90 bp | CGGCCGCCGGCACAGGTACGTTTCTCCGATCTCCACGGTGACTTCTaGTTCGCCACGCGCCGGAGTCGGCGGAGAGACCCGGCCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: RPPAQVRFSDLHGDF*FATRRSRRRDPARG Trigger: TCCCCGGGCCGGGTCTCTCCGCCGACTCCGGCGCGTGGCGAACCAGAAGTCACCGTGGAGATCGGAGAAACGTACCTGTGCCGGCGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS TCA 90 bp | TGCTATCCGGCCGCCGGCACAGGTACGTTTCTCCGATCTCCACGGTaGCTTCTGGTTCGCCACGCGCCGGAGTCGGCGGAGAGACCCGGC | + |
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Preference number: 5 (lower is better) Translates to: CYPAAGTGTFLRSPR*LLVRHAPESAERPG Trigger: GCCGGGTCTCTCCGCCGACTCCGGCGCGTGGCGAACCAGAAGTCACCGTGGAGATCGGAGAAACGTACCTGTGCCGGCGGCCGGATAGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS TCA 90 bp | AGACAATGTGCCCCGGAAGTCTCGCAGGATCTCCAGCAAGACCCATaGCCAGTAGCTTCTGTAGCTGAGTTTGCCCAGGTCACTCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: RQCAPEVSQDLQQDP*PVASVAEFAQVTQW Trigger: CCACTGAGTGACCTGGGCAAACTCAGCTACAGAAGCTACTGGTCATGGGTCTTGCTGGAGATCCTGCGAGACTTCCGGGGCACATTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTCGGGGGTGCCCACTaGAGGCAGACAGAGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: NTTLWHLCVPPKSSAPADFGGAH*RQTEST Trigger: AGTGGACTCTGTCTGCCTCAAGTGGGCACCCCCGAA...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS GCA 90 bp | TCTGGCTGCTCGGCCAGCTCACTCAGGTATTTCTCAGAGTTCTTCTaGACGGCATCCTTCACTGTCTTGGTCAGTGCGAGTCGGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SGCSASSLRYFSEFF*TASFTVLVSASRFL Trigger: CAAGAACCGACTCGCACTGACCAAGACAGTGAAGGATGCCGTGCAGAAGAACTCTGAGAAATACCTGAGTGAGCTGGCCGAGCAGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS TCA 90 bp | ACTGGCCCAGGTGGAAGCGGTAGCTCTTCTCGAACTTCATGTATTTaGGGCAGTACTCGCAGAGCCAAAGCTTGGGCTGCTTCCCATAGT | + |
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Preference number: 5 (lower is better) Translates to: TGPGGSGSSSRTSCI*GSTRRAKAWAASHS Trigger: ACTATGGGAAGCAGCCCAAGCTTTGGCTCTGCGAGTACTGCCTCAAATACATGAAGTTCGAGAAGAGCTACCGCTTCCACCTGGGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CCA 90 bp | TCAGGTATTTCTCAGAGTTCTTCTGCACGGCATCCTTCACTGTCTTaGTCAGTGCGAGTCGGTTCTTGTCCACCCATTCGTCCAGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: SGISQSSSARHPSLS*SVRVGSCPPIRPVA Trigger: GGCGACTGGACGAATGGGTGGACAAGAACCGACTCGCACTGACCAAGACAGTGAAGGATGCCGTGCAGAAGAACTCTGAGAAATACCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS-3UTR CAA 90 bp | TACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTGCATCCTTCACTGTCTaGGTCAGTGCGAGTCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: YHPLASLRTSKVQCTSRFASFTV*VSASRF Trigger: GAACCGACTCGCACTGACCAAGACAGTGAAGGATGC...AAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | TACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTCAGTACTTGACCATGTaGAGGGACTGCAGGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: YHPLASLRTSKVQCTSRFQYLTM*RDCRVL Trigger: CAGCACCCTGCAGTCCCTCAACATGGTCAAGTACTG...AAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTGGCCCTTCCAGTACTaGACCATGTTGAGGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTTLWHLCVPPKSSAPADWPFQY*TMLRDC Trigger: GCAGTCCCTCAACATGGTCAAGTACTGGAAGGGCCA...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | TACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTGAAAGCTTGACTTGTTaGTGCTTCGGGGGTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YHPLASLRTSKVQCTSRFESLTC*CFGGAH Trigger: GTGGGCACCCCCGAAGCACAAACAAGTCAAGCTTTC...AAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATAAGATGCAGGCCACGTaGTTTCCATCTGGGGATTCC | + |
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Preference number: 5 (lower is better) Translates to: NTTLWHLCVPPKSSAPADKMQAT*FPSGDS Trigger: GGAATCCCCAGATGGAAACAACGTGGCCTGCATCTT...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS GCA 90 bp | TTTCTCAGAGTTCTTCTGCACGGCATCCTTCACTGTCTTGGTCAGTaGGAGTCGGTTCTTGTCCACCCATTCGTCCAGTCGCCTGTTAAA | + |
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Preference number: 5 (lower is better) Translates to: FLRVLLHGILHCLGQ*ESVLVHPFVQSPVK Trigger: TTTAACAGGCGACTGGACGAATGGGTGGACAAGAACCGACTCGCACTGACCAAGACAGTGAAGGATGCCGTGCAGAAGAACTCTGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS GCA 90 bp | TCATCATGCTTTCGCTTTTGGTTTCGAGTGATCTTGCGCTCTGGCTaGTCGGCCAGCTCACTCAGGTATTTCTCAGAGTTCTTCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: SSCFRFWFRVILRSG*SASSLRYFSEFFCT Trigger: CGTGCAGAAGAACTCTGAGAAATACCTGAGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAAGCATGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS GCA 90 bp | CTTTTGAGGTGTTCCTCTACCAGCTTAGGTGTGACACAGATAACATaGTGGCCCTTCCAGTACTTGACCATGTTGAGGGACTGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LLRCSSTSLGVTQIT*WPFQYLTMLRDCRV Trigger: CACCCTGCAGTCCCTCAACATGGTCAAGTACTGGAAGGGCCAGCATGTTATCTGTGTCACACCTAAGCTGGTAGAGGAACACCTCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CCA 90 bp | GTAGCTTCTGTAGCTGAGTTTGCCCAGGTCACTCAGTGGCTTCTCTaGGGAGCCTACAGTACTCTCGAGCTTAGAGAGCTCATAACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VASVAEFAQVTQWLL*GAYSTLELRELITE Trigger: TTCAGTTATGAGCTCTCTAAGCTCGAGAGTACTGTAGGCTCCCCAGAGAAGCCACTGAGTGACCTGGGCAAACTCAGCTACAGAAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATCTACAGTTCCTGAAGTaGTTGCAGCAACTGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: NTTLWHLCVPPKSSAPADLQFLK*LQQLQL Trigger: CAGCTGCAGTTGCTGCAACAACTTCAGGAACTGTAG...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS GCA 90 bp | TACATACTTCACTTTGGTGATCGCCTCGTGTTCCTTTTCCAAGGCTaGTGTGGTGGGGTCCATCTCTGCATAGGTCTTCTGCACATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YILHFGDRLVFLFQG*CGGVHLCIGLLHMV Trigger: AACCATGTGCAGAAGACCTATGCAGAGATGGACCCCACCACAGCAGCCTTGGAAAAGGAACACGAGGCGATCACCAAAGTGAAGTATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CCA 90 bp | GATCTCATCATGCTTTCGCTTTTGGTTTCGAGTGATCTTGCGCTCTaGCTGCTCGGCCAGCTCACTCAGGTATTTCTCAGAGTTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLIMLSLLVSSDLAL*LLGQLTQVFLRVLL Trigger: CAGAAGAACTCTGAGAAATACCTGAGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAAGCATGATGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS-3UTR CAA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTCTACATACTTCACTTaGGTGATCGCCTCGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NTTLWHLCVPPKSSAPADSTYFT*VIASCS Trigger: GGAACACGAGGCGATCACCAAAGTGAAGTATGTAGA...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | AATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTCGAACTTCATGTATTaGAGGCAGTACTCGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NTTLWHLCVPPKSSAPADSNFMY*RQYSQS Trigger: GCTCTGCGAGTACTGCCTCAAATACATGAAGTTCGA...ATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS TCA 90 bp | GCAGAGCCAAAGCTTGGGCTGCTTCCCATAGTCCTCTGGGAAAGGTaGGAAATACCAGGCATCGATTTCATAGTTCCCAATGTGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: AEPKLGLLPIVLWER*EIPGIDFIVPNVDL Trigger: AAGATCCACATTGGGAACTATGAAATCGATGCCTGGTATTTCTCACCTTTCCCAGAGGACTATGGGAAGCAGCCCAAGCTTTGGCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS GCA 90 bp | CCTTCCTGGTCATTCACTCGAGACTGGATCACTTCTGCTGAATTTTaGCTGAAGGGGTCTAGAATGGGATCACCACAGGAGATAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSWSFTRDWITSAEF*LKGSRMGSPQEIKR Trigger: TCTCTTTATCTCCTGTGGTGATCCCATTCTAGACCCCTTCAGGCAAAATTCAGCAGAAGTGATCCAGTCTCGAGTGAATGACCAGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205357.2 |
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| CDS-3UTR CAA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCAGTCTTCTGCACATGGTaGATCTCATCATGCTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QVCTHIYRLEARKPRSQAVFCTW*ISSCFR Trigger: GCGAAAGCATGATGAGATCAACCATGTGCAGAAGAC...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCATTATACTGGGCACTTTaGAGGTGTTCCTCTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QVCTHIYRLEARKPRSQALYWAL*RCSSTS Trigger: GCTGGTAGAGGAACACCTCAAAAGTGCCCAGTATAA...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | CAGGTCTGTACACATATTTACAGGTTAGAGGCCAGGAAACCCAGATCCCAAGCACACTTCTTGGAAAGCTaGACTTGTTTGTGCTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVCTHIYRLEARKPRSQAHFLES*TCLCFG Trigger: CCCGAAGCACAAACAAGTCAAGCTTTCCAAGAAGTG...TGCTTGGGATCTGGGTTTCCTGGCCTCTAACCTGTAAATATGTGTACAGACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS-3UTR CAA 90 bp | ACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGATTTTTTCCCAATGTGGATCTaGTCTACATACTTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTLWHLCVPPKSSAPADFFPMWI*STYFTL Trigger: CAAAGTGAAGTATGTAGACAAGATCCACATTGGGAA...AAAATCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS TCA 72 bp | GCCGCCGGCACAGGTACGTTTCTCCGATCTCCACGGTaGCTTCTGGTTCGCCACGCGCCGGAGTCGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AAGTGTFLRSPR*LLVRHAPESAE Trigger: CTCCGCCGACTCCGGCGCGTGGCGAACCAGAAGTCACCGTGGAGATCGGAGAAACGTACCTGTGCCGGCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CCA 72 bp | GCACAGGTACGTTTCTCCGATCTCCACGGTGACTTCTaGTTCGCCACGCGCCGGAGTCGGCGGAGAGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: AQVRFSDLHGDF*FATRRSRRRDP Trigger: CGGGTCTCTCCGCCGACTCCGGCGCGTGGCGAACCAGAAGTCACCGTGGAGATCGGAGAAACGTACCTGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS TCA 72 bp | TTCCCCCGGGCCGGGCTCTCCCTCCCCTACAGTTCCTaGAGTTGTTGCAGCAACTGCAGCTGTAGCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FPRAGLSLPYSS*SCCSNCSCSSL Trigger: CAGGGAGCTACAGCTGCAGTTGCTGCAACAACTTCAGGAACTGTAGGGGAGGGAGAGCCCGGCCCGGGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS TCA 72 bp | GCCCCGGAAGTCTCGCAGGATCTCCAGCAAGACCCATaGCCAGTAGCTTCTGTAGCTGAGTTTGCCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: APEVSQDLQQDP*PVASVAEFAQV Trigger: GACCTGGGCAAACTCAGCTACAGAAGCTACTGGTCATGGGTCTTGCTGGAGATCCTGCGAGACTTCCGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS TCA 72 bp | TCTCCAGCAAGACCCATGACCAGTAGCTTCTGTAGCTaGGTTTGCCCAGGTCACTCAGTGGCTTCTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPARPMTSSFCS*VCPGHSVASLG Trigger: CCCCAGAGAAGCCACTGAGTGACCTGGGCAAACTCAGCTACAGAAGCTACTGGTCATGGGTCTTGCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CCA 72 bp | GTAGCTGAGTTTGCCCAGGTCACTCAGTGGCTTCTCTaGGGAGCCTACAGTACTCTCGAGCTTAGAGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VAEFAQVTQWLL*GAYSTLELREL Trigger: GAGCTCTCTAAGCTCGAGAGTACTGTAGGCTCCCCAGAGAAGCCACTGAGTGACCTGGGCAAACTCAGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CAA 72 bp | GCATCCTTCACTGTCTTGGTCAGTGCGAGTCGGTTCTaGTCCACCCATTCGTCCAGTCGCCTGTTAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASFTVLVSASRF*STHSSSRLLKP Trigger: GGGCTTTAACAGGCGACTGGACGAATGGGTGGACAAGAACCGACTCGCACTGACCAAGACAGTGAAGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS GCA 72 bp | CACTTTGGTGATCGCCTCGTGTTCCTTTTCCAAGGCTaGTGTGGTGGGGTCCATCTCTGCATAGGTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HFGDRLVFLFQG*CGGVHLCIGLL Trigger: CAGAAGACCTATGCAGAGATGGACCCCACCACAGCAGCCTTGGAAAAGGAACACGAGGCGATCACCAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS GCA 72 bp | GCTGGTGAGATGGCTCAGTGGGTAAGGGCACCCGACTaGTCTTTCAAAGGTCCGAAGTTCAAATCCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGEMAQWVRAPD*SFKGPKFKSQQ Trigger: TTGCTGGGATTTGAACTTCGGACCTTTGAAAGAGCAGTCGGGTGCCCTTACCCACTGAGCCATCTCACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205357.2 |
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| CDS CAA 90 bp | CTCAGGTATTTCTCAGAGTTCTTCTGCACGGCATCCTTCACTGTCTaGGTCAGTGCGAGTCGGTTCTTGTCCACCCATTCGTCCAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRYFSEFFCTASFTV*VSASRFLSTHSSSR Trigger: GCGACTGGACGAATGGGTGGACAAGAACCGACTCGCACTGACCAAGACAGTGAAGGATGCCGTGCAGAAGAACTCTGAGAAATACCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS TCA 72 bp | GGTGGAAGCGGTAGCTCTTCTCGAACTTCATGTATTTaGGGCAGTACTCGCAGAGCCAAAGCTTGGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGSGSSSRTSCI*GSTRRAKAWAA Trigger: AGCAGCCCAAGCTTTGGCTCTGCGAGTACTGCCTCAAATACATGAAGTTCGAGAAGAGCTACCGCTTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS GCA 72 bp | TCGGCCAGCTCACTCAGGTATTTCTCAGAGTTCTTCTaGACGGCATCCTTCACTGTCTTGGTCAGTGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SASSLRYFSEFF*TASFTVLVSAS Trigger: ACTCGCACTGACCAAGACAGTGAAGGATGCCGTGCAGAAGAACTCTGAGAAATACCTGAGTGAGCTGGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CCA 72 bp | AATTCTTCTCGGCCTTCCTGGTCATTCACTCGAGACTaGATCACTTCTGCTGAATGCCAGGTGCTATCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: NSSRPSWSFTRD*ITSAECQVLSG Trigger: GCCGGATAGCACCTGGCATTCAGCAGAAGTGATCCAGTCTCGAGTGAATGACCAGGAAGGCCGAGAAGAATT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CCA 72 bp | TCTCAGAGTTCTTCTGCACGGCATCCTTCACTGTCTTaGTCAGTGCGAGTCGGTTCTTGTCCACCCATTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SQSSSARHPSLS*SVRVGSCPPIR Trigger: ACGAATGGGTGGACAAGAACCGACTCGCACTGACCAAGACAGTGAAGGATGCCGTGCAGAAGAACTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CAA 72 bp | TTCTCAGAGTTCTTCTGCACGGCATCCTTCACTGTCTaGGTCAGTGCGAGTCGGTTCTTGTCCACCCATTCG | + |
|
Preference number: 6 (lower is better) Translates to: FSEFFCTASFTV*VSASRFLSTHS Trigger: CGAATGGGTGGACAAGAACCGACTCGCACTGACCAAGACAGTGAAGGATGCCGTGCAGAAGAACTCTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CAA 90 bp | TGCATAGGTCTTCTGCACATGGTTGATCTCATCATGCTTTCGCTTTaGGTTTCGAGTGATCTTGCGCTCTGGCTGCTCGGCCAGCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: CIGLLHMVDLIMLSL*VSSDLALWLLGQLT Trigger: AGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAAGCATGATGAGATCAACCATGTGCAGAAGACCTATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS GCA 72 bp | TTTCGCTTTTGGTTTCGAGTGATCTTGCGCTCTGGCTaGTCGGCCAGCTCACTCAGGTATTTCTCAGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FRFWFRVILRSG*SASSLRYFSEF Trigger: GAACTCTGAGAAATACCTGAGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CCA 72 bp | ATGCTTTCGCTTTTGGTTTCGAGTGATCTTGCGCTCTaGCTGCTCGGCCAGCTCACTCAGGTATTTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: MLSLLVSSDLAL*LLGQLTQVFLR Trigger: TCTGAGAAATACCTGAGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CCA 72 bp | TTCTGCACATGGTTGATCTCATCATGCTTTCGCTTTTaGTTTCGAGTGATCTTGCGCTCTGGCTGCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FCTWLISSCFRF*FRVILRSGCSA Trigger: GGCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAAGCATGATGAGATCAACCATGTGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CCA 72 bp | TCCTCTACCAGCTTAGGTGTGACACAGATAACATGCTaGCCCTTCCAGTACTTGACCATGTTGAGGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTSLGVTQITC*PFQYLTMLRDC Trigger: GCAGTCCCTCAACATGGTCAAGTACTGGAAGGGCCAGCATGTTATCTGTGTCACACCTAAGCTGGTAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CAA 72 bp | ATCTCATCATGCTTTCGCTTTTGGTTTCGAGTGATCTaGCGCTCTGGCTGCTCGGCCAGCTCACTCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ISSCFRFWFRVI*RSGCSASSLRY Trigger: ATACCTGAGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAAGCATGATGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CAA 72 bp | CTTCTGCACATGGTTGATCTCATCATGCTTTCGCTTTaGGTTTCGAGTGATCTTGCGCTCTGGCTGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLHMVDLIMLSL*VSSDLALWLLG Trigger: GCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAAGCATGATGAGATCAACCATGTGCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS CAA 90 bp | ACATGGTTGATCTCATCATGCTTTCGCTTTTGGTTTCGAGTGATCTaGCGCTCTGGCTGCTCGGCCAGCTCACTCAGGTATTTCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TWLISSCFRFWFRVI*RSGCSASSLRYFSE Trigger: CTCTGAGAAATACCTGAGTGAGCTGGCCGAGCAGCCAGAGCGCAAGATCACTCGAAACCAAAAGCGAAAGCATGATGAGATCAACCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033070.9 ENSMUST00000205357.2 |
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| CDS GCA 72 bp | TCATTCACTCGAGACTGGATCACTTCTGCTGAATTTTaGCTGAAGGGGTCTAGAATGGGATCACCACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFTRDWITSAEF*LKGSRMGSPQE Trigger: CTCCTGTGGTGATCCCATTCTAGACCCCTTCAGGCAAAATTCAGCAGAAGTGATCCAGTCTCGAGTGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205357.2 |
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| CDS CCA 72 bp | AATTCTTCTCGGCCTTCCTGGTCATTCACTCGAGACTaGATCACTTCTGCTGAATTTTGCCTGAAGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSSRPSWSFTRD*ITSAEFCLKGS Trigger: AGACCCCTTCAGGCAAAATTCAGCAGAAGTGATCCAGTCTCGAGTGAATGACCAGGAAGGCCGAGAAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205357.2 |
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| CDS CAA 90 bp | CAGACAGAGTCCACTGTGATAGGTGGTTTCTTATACTGGGCACTTTaGAGGTGTTCCTCTACCAGCTTAGGTGTGACACAGATAACATGC | + |
|
Preference number: 6 (lower is better) Translates to: QTESTVIGGFLYWAL*RCSSTSLGVTQITC Trigger: GCATGTTATCTGTGTCACACCTAAGCTGGTAGAGGAACACCTCAAAAGTGCCCAGTATAAGAAACCACCTATCACAGTGGACTCTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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| CDS CAA 72 bp | TCCACTGTGATAGGTGGTTTCTTATACTGGGCACTTTaGAGGTGTTCCTCTACCAGCTTAGGTGTGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: STVIGGFLYWAL*RCSSTSLGVTQ Trigger: CTGTGTCACACCTAAGCTGGTAGAGGAACACCTCAAAAGTGCCCAGTATAAGAAACCACCTATCACAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033070.9 |
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