Pregenerated sensors for KAT2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000708Ensembl transcript IDs: ENSMUST00000000724.15, ENSMUST00000164390.2, ENSMUST00000166525.2, ENSMUST00000171072.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTAACATTAACTCAACCTCAAATATTTTCAAGCTAACACCTTTGTaGCCTGGGAACGGATCTTTTAGAAGTTGGGCCCTGCACAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: LNINSTSNIFKLTPL*PGNGSFRSWALHKQ Trigger: TTGCTTGTGCAGGGCCCAACTTCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGTTGAGTTAATGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR CCA 90 bp | AGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTaGACAGACGCTTCAGCGAAATCGGTACAAAGCTGTTTTAAAACC | + |
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Preference number: 1 (lower is better) Translates to: RMSTQEITNFHRIPN*TDASAKSVQSCFKT Trigger: GGTTTTAAAACAGCTTTGTACCGATTTCGCTGAAGCGTCTGTCCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR TCA 90 bp | AACGGATCTTTTAGAAGTTGGGCCCTGCACAAGCAAAGTCAAATATaGGATGGACACATATCTGCCAAGATATTATTAAATAGTGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: NGSFRSWALHKQSQI*DGHISAKILLNSGC Trigger: ACAACCACTATTTAATAATATCTTGGCAGATATGTGTCCATCTCATATTTGACTTTGCTTGTGCAGGGCCCAACTTCTAAAAGATCCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR TCA 90 bp | CACTCGGGAGCAATGCCAGGATATTTTCCTTCAAGCACACTACCTCTGCAAGCTAACCAAAAACCTAAATaGCCTGTTTTAGGCACACTG | + |
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Preference number: 2 (lower is better) Translates to: HSGAMPGYFPSSTLPLQANQKPK*PVLGTL Trigger: CAGTGTGCCTAAAACAGGTCATTTAGGTTTTTGGTT...AGCTTGCAGAGGTAGTGTGCTTGAAGGAAAATATCCTGGCATTGCTCCCGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR CCA 90 bp | CAATACTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCATTCCCAGAGTTGGGCTaGCAGGTGTCCCACTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: QYSLRMSTQEITNFHRIPFPELG*QVSHFS Trigger: AGAAAAGTGGGACACCTGCCAGCCCAACTCTGGGAA...TGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAGTATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR CAA 90 bp | TGTCTTAACATTAACTCAACCTCAAATATTTTCAAGCTAACACCTTaGTGGCCTGGGAACGGATCTTTTAGAAGTTGGGCCCTGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: CLNINSTSNIFKLTP*WPGNGSFRSWALHK Trigger: CTTGTGCAGGGCCCAACTTCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGTTGAGTTAATGTTAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR GCA 90 bp | AAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGACAGATATGAACATACAGCATaGCTTCCATGTCAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KDVYPGNNKLSQDTKLDRYEHTA*LPCQKQ Trigger: CTGCTTCTGACATGGAAGGCATGCTGTATGTTCATA...TCTGTCCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR CCA 90 bp | AAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGACAGAGCAATAGTCAGCTACTaGACATGCCAGAGAAAAATT | + |
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Preference number: 2 (lower is better) Translates to: KDVYPGNNKLSQDTKLDRAIVSY*TCQRKI Trigger: AATTTTTCTCTGGCATGTCCAGTAGCTGACTATTGC...TCTGTCCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR GCA 90 bp | TCGGCCGTTAAAGCATTTGCAAAAACCACATTCTACTTCTGCTTTATTGCACAACAAGCACACTACCTCTaGAAGCTATTTTTAATGACT | + |
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Preference number: 2 (lower is better) Translates to: SAVKAFAKTTFYFCFIAQQAHYL*KLFLMT Trigger: AGTCATTAAAAATAGCTTGCAGAGGTAGTGTGCTTG...TTGTGCAATAAAGCAGAAGTAGAATGTGGTTTTTGCAAATGCTTTAACGGCCGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR CCA 90 bp | AAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGACAGAAAGTCAAATATGAGATaGACACATATCTGCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: KDVYPGNNKLSQDTKLDRKSNMR*THICQD Trigger: ATCTTGGCAGATATGTGTCCATCTCATATTTGACTT...TCTGTCCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR GCA 90 bp | AGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATAATCTTGGTACTGTGTaGAATTTCCTCACATACAGG | + |
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Preference number: 2 (lower is better) Translates to: SPKTKMVNKIVQRMLVGYNLGTV*NFLTYR Trigger: CCTGTATGTGAGGAAATTGCACACAGTACCAAGATT...ATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR GCA 72 bp | CATGCCTTCCATGTCAGAAGCAGCACTCGGGAGCAATaGCAGGATATTTTCCTTCAAGCACACTACCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: HAFHVRSSTREQ*QDIFLQAHYLC Trigger: GCAGAGGTAGTGTGCTTGAAGGAAAATATCCTGGCATTGCTCCCGAGTGCTGCTTCTGACATGGAAGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCACTCGGGAGCAATGCCAGGATATTTTCCTTCAAGCACACTACCTCTGCAGATTACCCCAAATCTaGGTACTGTGTGCAATTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSTREQCQDIFLQAHYLCRLPQI*VLCAIS Trigger: GGAAATTGCACACAGTACCAAGATTTGGGGTAATCT...GCAGAGGTAGTGTGCTTGAAGGAAAATATCCTGGCATTGCTCCCGAGTGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR GCA 72 bp | AGTGTGATCTTCAGTGAACACTATGAACATACAGCATaGCTTCCATGTCAGAAGCAGCACTCGGGAGCAATG | + |
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Preference number: 3 (lower is better) Translates to: SVIFSEHYEHTA*LPCQKQHSGAM Trigger: CATTGCTCCCGAGTGCTGCTTCTGACATGGAAGGCATGCTGTATGTTCATAGTGTTCACTGAAGATCACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR CAA 90 bp | CAATACTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCATGGTTTTTCCCAGAGTaGGGCTGGCAGGTGTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: QYSLRMSTQEITNFHRIPWFFPE*GWQVSH Trigger: GTGGGACACCTGCCAGCCCAACTCTGGGAAAAACCA...TGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAGTATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR GCA 72 bp | TGTGGCCTGGGAACGGATCTTTTAGAAGTTGGGCCCTaGACAAGCAAAGTCAAATATGAGATGGACACATAT | + |
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Preference number: 3 (lower is better) Translates to: CGLGTDLLEVGP*TSKVKYEMDTY Trigger: ATATGTGTCCATCTCATATTTGACTTTGCTTGTGCAGGGCCCAACTTCTAAAAGATCCGTTCCCAGGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR CCA 72 bp | AACTCAACCTCAAATATTTTCAAGCTAACACCTTTGTaGCCTGGGAACGGATCTTTTAGAAGTTGGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: NSTSNIFKLTPL*PGNGSFRSWAL Trigger: CAGGGCCCAACTTCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGTTGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR CCA 72 bp | ACCCAGGAAATAACAAACTTTCACAGGATACCAAACTaGACAGACGCTTCAGCGAAATCGGTACAAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: TQEITNFHRIPN*TDASAKSVQSC Trigger: ACAGCTTTGTACCGATTTCGCTGAAGCGTCTGTCCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR-3UTR CAA 90 bp | GAGACATTCATGGTCAAACTTTTCTCTAGATTACCCCAAATCTTGGTACTGTGTCCTCACATACAGGTTTaGAGGAAGCCCCTGATCATC | + |
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Preference number: 3 (lower is better) Translates to: ETFMVKLFSRLPQILVLCPHIQV*RKPLII Trigger: GATGATCAGGGGCTTCCTCAAAACCTGTATGTGAGG...ACACAGTACCAAGATTTGGGGTAATCTAGAGAAAAGTTTGACCATGAATGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR TCA 72 bp | TTCCTTACATTTCCCAATGTTGAGGCATCTTCAGTGTaGTCTTCAGTGAACACTATGAACATACAGCATGCC | + |
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Preference number: 3 (lower is better) Translates to: FLTFPNVEASSV*SSVNTMNIQHA Trigger: GGCATGCTGTATGTTCATAGTGTTCACTGAAGATCACACTGAAGATGCCTCAACATTGGGAAATGTAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR TCA 72 bp | ACAATGGAGGTGTTAAAATACTGGCCTAAACTTTGGTaGGAATTCAGTTCACCTCAGACAAACAAAACTCTG | + |
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Preference number: 3 (lower is better) Translates to: TMEVLKYWPKLW*EFSSPQTNKTL Trigger: CAGAGTTTTGTTTGTCTGAGGTGAACTGAATTCTCACCAAAGTTTAGGCCAGTATTTTAACACCTCCATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| 3UTR TCA 72 bp | TTTAGAAGTTGGGCCCTGCACAAGCAAAGTCAAATATaGGATGGACACATATCTGCCAAGATATTATTAAAT | + |
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Preference number: 3 (lower is better) Translates to: FRSWALHKQSQI*DGHISAKILLN Trigger: ATTTAATAATATCTTGGCAGATATGTGTCCATCTCATATTTGACTTTGCTTGTGCAGGGCCCAACTTCTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | GAGGAAGCCCCTGATCATCTACCATGCAATAGTCAGCTACTGGACATGCCAGAGGGCCACCGCGGTCGCTaGCCCGCAGGAAGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: EEAPDHLPCNSQLLDMPEGHRGR*PAGSRA Trigger: AGCTCTGCTTCCTGCGGGCCAGCGACCGCGGTGGCC...CTCTGGCATGTCCAGTAGCTGACTATTGCATGGTAGATGATCAGGGGCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | GAGGAAGCCCCTGATCATCTACCATGCAATAGTCAGCTACTGGACATGCCAGAGTCTGGCCGAATGGGCTaGCAGAAAATTGGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: EEAPDHLPCNSQLLDMPESGRMG*QKIGLW Trigger: CCAGAGACCAATTTTCTGTCAGCCCATTCGGCCAGA...CTCTGGCATGTCCAGTAGCTGACTATTGCATGGTAGATGATCAGGGGCTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | GAGGAAGCCCCTGATCATCTACCATGCAATAGTCAGCTACTGGACATGCCAGAGACTGGGCTTCTCAAATaGCGGCTTCTTCTCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EEAPDHLPCNSQLLDMPETGLLK*RLLLQG Trigger: TCCTTGGAGAAGAAGCCGCCATTTGAGAAGCCCAGT...CTCTGGCATGTCCAGTAGCTGACTATTGCATGGTAGATGATCAGGGGCTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | AGCAGCACTCGGGAGCAATGCCAGGATATTTTCCTTCAAGCACACTACCTCTGCCTGACAATTATCTGCTaGAGGTCTCCTCTTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SSTREQCQDIFLQAHYLCLTIIC*RSPLGG Trigger: TCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAG...GCAGAGGTAGTGTGCTTGAAGGAAAATATCCTGGCATTGCTCCCGAGTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR GCA 90 bp | CACTCGGGAGCAATGCCAGGATATTTTCCTTCAAGCACACTACCTCTGCAAGCTGGTTCTTCCAGCCATTaGATTTACAGGACTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HSGAMPGYFPSSTLPLQAGSSSH*IYRTPL Trigger: CAGAGGAGTCCTGTAAATGCAATGGCTGGAAGAACC...AGCTTGCAGAGGTAGTGTGCTTGAAGGAAAATATCCTGGCATTGCTCCCGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR GCA 90 bp | AGCAGCACTCGGGAGCAATGCCAGGATATTTTCCTTCAAGCACACTACCTCTGCTTGGTGAACACTCGTTaGAAGTCCGCCATGAATAAC | + |
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Preference number: 4 (lower is better) Translates to: SSTREQCQDIFLQAHYLCLVNTR*KSAMNN Trigger: GTTATTCATGGCGGACTTGCAACGAGTGTTCACCAA...GCAGAGGTAGTGTGCTTGAAGGAAAATATCCTGGCATTGCTCCCGAGTGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR GCA 90 bp | AGCAGCACTCGGGAGCAATGCCAGGATATTTTCCTTCAAGCACACTACCTCTGCAGAACTTCTCCAGGATaGTGGCGCATTTGTAGTACT | + |
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Preference number: 4 (lower is better) Translates to: SSTREQCQDIFLQAHYLCRTSPG*WRICST Trigger: AGTACTACAAATGCGCCAGCATCCTGGAGAAGTTCT...GCAGAGGTAGTGTGCTTGAAGGAAAATATCCTGGCATTGCTCCCGAGTGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | GCAATTTCCTCACATACAGGTTTTGAGGAAGCCCCTGATCATCTACCATGCAATGCTGCAGGATGTTCTTaGGGGTGCTGTAAAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AISSHTGFEEAPDHLPCNAAGCS*GCCKAA Trigger: AGCAGCTTTACAGCACCCTCAAGAACATCCTGCAGC...ATTGCATGGTAGATGATCAGGGGCTTCCTCAAAACCTGTATGTGAGGAAATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | CAGATCCATGGGGAACCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTCTTTCTGTGTATGGGATCTaGGGGTTCAGCTCACATCCC | + |
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Preference number: 4 (lower is better) Translates to: QIHGEPYNFIISRSFCSLSVYGI*GFSSHP Trigger: GGGATGTGAGCTGAACCCTCAGATCCCATACACAGA...AAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTCCCCATGGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171072.2 |
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| CDS-3UTR TCA 90 bp | GCAATTTCCTCACATACAGGTTTTGAGGAAGCCCCTGATCATCTACCATGCAATGCCGAACTCCATCTTTaGAACACGAAAGTCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: AISSHTGFEEAPDHLPCNAELHL*NTKVQG Trigger: ACCCTGGACTTTCGTGTTTCAAAGATGGAGTTCGGC...ATTGCATGGTAGATGATCAGGGGCTTCCTCAAAACCTGTATGTGAGGAAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | CAGATCCATGGGGAACCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTCTTGCTGCAGGATGTTCTTaGGGGTGCTGTAAAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QIHGEPYNFIISRSFCSLAAGCS*GCCKAA Trigger: AGCAGCTTTACAGCACCCTCAAGAACATCCTGCAGC...AAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTCCCCATGGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171072.2 |
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| CDS-3UTR CCA 90 bp | GAGGAAGCCCCTGATCATCTACCATGCAATAGTCAGCTACTGGACATGCCAGAGCATGGACAGAAACTTTaGGAAATGTGTGAGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: EEAPDHLPCNSQLLDMPEHGQKL*EMCEDK Trigger: CTTATCCTCACACATTTCCCAAAGTTTCTGTCCATG...CTCTGGCATGTCCAGTAGCTGACTATTGCATGGTAGATGATCAGGGGCTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | ACCTCAAATATTTTCAAGCTAACACCTTTGTGGCCTGGGAACGGATCTTTTAGAGGATTCCTAGCGGGCTaGTTCTGGAAGAGGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TSNIFKLTPLWPGNGSFRGFLAG*FWKRLR Trigger: TCTCAGCCTCTTCCAGAACCAGCCCGCTAGGAATCC...TCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | GCACTAAGCTGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTCACTCGAGATCTCTTaGCCTCCTCGGGAGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: ALSWSPKTKMVNKIVQRMSLEIS*PPREHE Trigger: CTCATGCTCCCGAGGAGGCCAAGAGATCTCGAGTGA...CATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCAGCTTAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000166525.2 |
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| CDS-3UTR CCA 90 bp | TGGTTGTATATTAGTTGGTTTTTCCCAGAGTTGGGCTGGCAGGTGTCCCACTTTAGACAAACAAAACTCTaGTCCAAGCATCCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: WLYISWFFPELGWQVSHFRQTKL*SKHPCR Trigger: CCTGCAGGGATGCTTGGACCAGAGTTTTGTTTGTCT...AAAGTGGGACACCTGCCAGCCCAACTCTGGGAAAAACCAACTAATATACAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166525.2 |
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| CDS-3UTR TCA 90 bp | ATCCATGGGGAACCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTCTTCACGCCGAACTCCATCTTTaGAACACGAAAGTCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: IHGEPYNFIISRSFCSLHAELHL*NTKVQG Trigger: ACCCTGGACTTTCGTGTTTCAAAGATGGAGTTCGGC...GTGAAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTCCCCATGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171072.2 |
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| CDS-3UTR GCA 90 bp | GTTAAATGTACCAGAAAATACAAAGAATCCTTACATAGTGAAGCAAGGCTCCCCGCCCAGAAGAGCCTCTaGATCCAGGACTTGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VKCTRKYKESLHSEARLPAQKSL*IQDLFS Trigger: GGAGAACAAGTCCTGGATGCAGAGGCTCTTCTGGGC...GGGGAGCCTTGCTTCACTATGTAAGGATTCTTTGTATTTTCTGGTACATTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | TTAATATGGTTGTATATTAGTTGGTTTTTCCCAGAGTTGGGCTGGCAGGTGTCCCACCCTGTTCAATACTaGGCTTCTCAAATGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: LIWLYISWFFPELGWQVSHPVQY*ASQMAA Trigger: AGCCGCCATTTGAGAAGCCCAGTATTGAACAGGGTG...GGACACCTGCCAGCCCAACTCTGGGAAAAACCAACTAATATACAACCATATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | TCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGTCACTCGAGATCTCTTaGCCTCCTCGGGAGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SLRMSTQEITNFHRIPNWSLEIS*PPREHE Trigger: CTCATGCTCCCGAGGAGGCCAAGAGATCTCGAGTGA...CCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | TGGTTGTATATTAGTTGGTTTTTCCCAGAGTTGGGCTGGCAGGTGTCCCACTTTAGGATTCTGTCAAACTaGCAATTATCTGCTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: WLYISWFFPELGWQVSHFRILSN*QLSAGG Trigger: ACCTCCAGCAGATAATTGTCAGTTTGACAGAATCCT...AAAGTGGGACACCTGCCAGCCCAACTCTGGGAAAAACCAACTAATATACAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | AAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGACAGATTGTTCTCCCTCCATTaGTCTGCTCATGGGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KDVYPGNNKLSQDTKLDRLFSLH*SAHGKW Trigger: CCACTTCCCATGAGCAGATCAATGGAGGGAGAACAA...TCTGTCCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | TCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGCCACGTGGAATTCAATaGCACCCCTGCGTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLRMSTQEITNFHRIPNWPRGIQ*HPCVLP Trigger: TGGAAGAACGCAGGGGTGTCATTGAATTCCACGTGG...CCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | GTTAAATGTACCAGAAAATACAAAGAATCCTTACATAGTGAAGCAAGGCTCCCCTCTGTGTATGGGATCTaGGGGTTCAGCTCACATCCC | + |
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Preference number: 4 (lower is better) Translates to: VKCTRKYKESLHSEARLPSVYGI*GFSSHP Trigger: GGGATGTGAGCTGAACCCTCAGATCCCATACACAGA...GGGGAGCCTTGCTTCACTATGTAAGGATTCTTTGTATTTTCTGGTACATTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR GCA 90 bp | CTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGTGGTCCAAGCATCCCTaGAGGGTCTGTGATGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LFKDVYPGNNKLSQDTKLWSKHP*RVCDGR Trigger: TCTACCATCACAGACCCTGCAGGGATGCTTGGACCA...CAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR GCA 90 bp | TGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATGGTCCAAGCATCCCTaGAGGGTCTGTGATGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSPKTKMVNKIVQRMLVGWSKHP*RVCDGR Trigger: TCTACCATCACAGACCCTGCAGGGATGCTTGGACCA...TCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000166525.2 |
||
| CDS-3UTR CCA 90 bp | GCAATTTCCTCACATACAGGTTTTGAGGAAGCCCCTGATCATCTACCATGCAATTGTCTTTTTCCTGTCTaGCTTGTTCCAAGAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AISSHTGFEEAPDHLPCNCLFPV*LVPRAV Trigger: GACAGCTCTTGGAACAAGCCAGACAGGAAAAAGACA...ATTGCATGGTAGATGATCAGGGGCTTCCTCAAAACCTGTATGTGAGGAAATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | AGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATGTGCCGCCTCATCTCTaGCCGAATGGGCTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPKTKMVNKIVQRMLVGYVPPHL*PNGLTE Trigger: TTCTGTCAGCCCATTCGGCCAGAGATGAGGCGGCAC...ATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | TCGGCCGTTAAAGCATTTGCAAAAACCACATTCTACTTCTGCTTTATTGCACAAGGCCAAGCATTTGGATaGTTCTTCACCTGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAVKAFAKTTFYFCFIAQGQAFG*FFTCCR Trigger: CCTGCAGCAGGTGAAGAACCATCCAAATGCTTGGCC...TTGTGCAATAAAGCAGAAGTAGAATGTGGTTTTTGCAAATGCTTTAACGGCCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| 3UTR CAA 72 bp | TCTTGGTACTGTGTGCAATTTCCTCACATACAGGTTTaGAGGAAGCCCCTGATCATCTACCATGCAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWYCVQFPHIQV*RKPLIIYHAIV Trigger: GACTATTGCATGGTAGATGATCAGGGGCTTCCTCAAAACCTGTATGTGAGGAAATTGCACACAGTACCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGACAAAGACGAGCCGTGTaGTGTACTCTTTGGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: WSPKTKMVNKIVQRMLVGQRRAV*CTLWAF Trigger: GAATGCCCAAAGAGTACATCACACGGCTCGTCTTTG...TCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | CATGGGGAACCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTCTTCACTGGCCCCTTCATAATCCTTaGTGTAGCCAACATATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HGEPYNFIISRSFCSLHWPLHNP*CSQHIW Trigger: CCAAATATGTTGGCTACATCAAGGATTATGAAGGGG...CCAGTGAAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTCCCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171072.2 |
||
| CDS-3UTR CCA 90 bp | ACCTCAAATATTTTCAAGCTAACACCTTTGTGGCCTGGGAACGGATCTTTTAGAGCATCTTCTTCTTTGTaGACGCAGGTGAAGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TSNIFKLTPLWPGNGSFRASSSL*TQVKRY Trigger: GTACCTCTTCACCTGCGTCCACAAAGAAGAAGATGC...TCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | ACCTCAAATATTTTCAAGCTAACACCTTTGTGGCCTGGGAACGGATCTTTTAGAGGTTCAGAAACATCTTaGCCAGCTCGATCGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSNIFKLTPLWPGNGSFRGSETS*PARSLS Trigger: AGACAACGATCGAGCTGGCCAAGATGTTTCTGAACC...TCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | TTAATATGGTTGTATATTAGTTGGTTTTTCCCAGAGTTGGGCTGGCAGGTGTCCGCTGCTCAGGGTCTTTaGGCTCTTTACTTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIWLYISWFFPELGWQVSAAQGL*ALYFSL Trigger: AAGAGAAAAGTAAAGAGCCCAAAGACCCTGAGCAGC...GGACACCTGCCAGCCCAACTCTGGGAAAAACCAACTAATATACAACCATATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | CTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGACTTCTCCAGGATGCTaGCGCATTTGTAGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFKDVYPGNNKLSQDTKLTSPGC*RICSTR Trigger: GCGAGTACTACAAATGCGCCAGCATCCTGGAGAAGT...CAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | TTTCAGATCCATGGGGAACCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTAGAAACCCTGCTTCTTaGAATAGCCGATGGCATACT | + |
|
Preference number: 4 (lower is better) Translates to: FQIHGEPYNFIISRSFCSRNPAS*NSRWHT Trigger: AGTATGCCATCGGCTATTTCAAGAAGCAGGGTTTCT...AGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTCCCCATGGATCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171072.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGTCCAGCCTGTCTCTCTaGTTCCAGGAATGCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LFKDVYPGNNKLSQDTKLSSLSL*FQECFL Trigger: TAGAAAGCATTCCTGGAATCAGAGAGACAGGCTGGA...CAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGACATAGTACCTGTTCCTaGGGCGTTCACTCATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSPKTKMVNKIVQRMLVGHSTCS*GVHSWF Trigger: AAACCATGAGTGAACGCCTCAGGAACAGGTACTATG...TCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR GCA 90 bp | GCACTAAGCTGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGCTCCCTCCATTGATCTaGTCATGGGAAGTGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSWSPKTKMVNKIVQRMLPPLI*SWEVEF Trigger: AAATTCCACTTCCCATGAGCAGATCAATGGAGGGAG...CATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCAGCTTAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR GCA 90 bp | CAATACTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCATGGTTCTTCACCTGCTaGAGGATGTTCTTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QYSLRMSTQEITNFHRIPWFFTC*RMFLRV Trigger: CACCCTCAAGAACATCCTGCAGCAGGTGAAGAACCA...TGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | GAGACATTCATGGTCAAACTTTTCTCTAGATTACCCCAAATCTTGGTACTGTGTTCCCAAACACCTTTGTaGTTTCGTACCGAGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETFMVKLFSRLPQILVLCSQTPL*FRTEVS Trigger: GCTTACCTCGGTACGAAACCACAAAGGTGTTTGGGA...ACACAGTACCAAGATTTGGGGTAATCTAGAGAAAAGTTTGACCATGAATGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | TCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGGGACTGATTACTGTTTaGATTCCTAGCGGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRMSTQEITNFHRIPNWGLITV*IPSGLV Trigger: AACCAGCCCGCTAGGAATCCAAACAGTAATCAGTCC...CCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | TCGGCCGTTAAAGCATTTGCAAAAACCACATTCTACTTCTGCTTTATTGCACAATCATCTCTGGCCGAATaGGCTGACAGAAAATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAVKAFAKTTFYFCFIAQSSLAE*ADRKLV Trigger: GACCAATTTTCTGTCAGCCCATTCGGCCAGAGATGA...TTGTGCAATAAAGCAGAAGTAGAATGTGGTTTTTGCAAATGCTTTAACGGCCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | TCGGCCGTTAAAGCATTTGCAAAAACCACATTCTACTTCTGCTTTATTGCACAATTCTTGTTTGGTTTCTaGTTCAGGGAGTTGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SAVKAFAKTTFYFCFIAQFLFGF*FRELPT Trigger: GGTGGGCAACTCCCTGAACCAGAAACCAAACAAGAA...TTGTGCAATAAAGCAGAAGTAGAATGTGGTTTTTGCAAATGCTTTAACGGCCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| 3UTR CAA 72 bp | ATTAACTCAACCTCAAATATTTTCAAGCTAACACCTTaGTGGCCTGGGAACGGATCTTTTAGAAGTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: INSTSNIFKLTP*WPGNGSFRSWA Trigger: GGCCCAACTTCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGTTGAGTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATCTTTCGATGGCAAGTaGCTAAACTTGTACTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: WSPKTKMVNKIVQRMLVGSFDGK*LNLYCT Trigger: CGTGCAGTACAAGTTTAGTCACTTGCCATCGAAAGA...TCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | AGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATGGTTCTGGAAGAGGCTaGGAGAAAATCCTGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPKTKMVNKIVQRMLVGYGSGRG*EKILIP Trigger: TGGGATCAGGATTTTCTCTCAGCCTCTTCCAGAACC...ATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | AAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGACAGAAGAAAACAATCTCTGTaGATCCCTGGGATGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDVYPGNNKLSQDTKLDRRKQSL*IPGMET Trigger: TGTTTCCATCCCAGGGATTCACAGAGATTGTTTTCT...TCTGTCCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | CTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGAGAAACCCTGCTTCTTaGAATAGCCGATGGCATACT | + |
|
Preference number: 4 (lower is better) Translates to: LFKDVYPGNNKLSQDTKLRNPAS*NSRWHT Trigger: AGTATGCCATCGGCTATTTCAAGAAGCAGGGTTTCT...CAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR GCA 90 bp | GCAATTTCCTCACATACAGGTTTTGAGGAAGCCCCTGATCATCTACCATGCAATCTTTCTATAGGAATCTaGCGAACTCCATCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AISSHTGFEEAPDHLPCNLSIGI*RTPSLK Trigger: TTTCAAAGATGGAGTTCGGCAGATTCCTATAGAAAG...ATTGCATGGTAGATGATCAGGGGCTTCCTCAAAACCTGTATGTGAGGAAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | CCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATAACCTAGCGGGCTGGTTCTaGAAGAGGCTGAGAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PKTKMVNKIVQRMLVGYNLAGWF*KRLREN Trigger: ATTTTCTCTCAGCCTCTTCCAGAACCAGCCCGCTAG...GTTATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | TGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATTCTGTTCTCTTCACTaGTTCCATGAAAGGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSPKTKMVNKIVQRMLVGFCSLH*FHERPS Trigger: GCTTGGCCTTTCATGGAACCAGTGAAGAGAACAGAA...TCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR GCA 90 bp | AAATCGGTACAAAGCTGTTTTAAAACCAGTCTGAGACACTTAATGCAGCCTCTAGATGGCATACTCATCTaGATATGTGAGGAAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSVQSCFKTSLRHLMQPLDGILI*ICEEVE Trigger: CTCAACTTCCTCACATATGCAGATGAGTATGCCATC...TAGAGGCTGCATTAAGTGTCTCAGACTGGTTTTAAAACAGCTTTGTACCGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CCA 90 bp | TCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCAAACTGGTGGTATTCTTTGAGATaGTTCATCAGGTGGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRMSTQEITNFHRIPNWWYSLR*FIRWVP Trigger: TGGAACCCACCTGATGAACCATCTCAAAGAATACCA...CCAGTTTGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | AGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATGAAAGGCCAAGCATTTaGATGGTTCTTCACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPKTKMVNKIVQRMLVGYERPSI*MVLHLL Trigger: CAGCAGGTGAAGAACCATCCAAATGCTTGGCCTTTC...ATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR TCA 90 bp | AAATCGGTACAAAGCTGTTTTAAAACCAGTCTGAGACACTTAATGCAGCCTCTACTTGACTTGTTCATTTaGGGTTACTGCACAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSVQSCFKTSLRHLMQPLLDLFI*GYCTEN Trigger: GTTTTCTGTGCAGTAACCTCAAATGAACAAGTCAAG...TAGAGGCTGCATTAAGTGTCTCAGACTGGTTTTAAAACAGCTTTGTACCGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR GCA 90 bp | CCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTCTTCACTGGTTCCATGAACTTTCTATAGGAATCTaGCGAACTCCATCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PYNFIISRSFCSLHWFHELSIGI*RTPSLK Trigger: TTTCAAAGATGGAGTTCGGCAGATTCCTATAGAAAG...TTCATGGAACCAGTGAAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171072.2 |
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| CDS-3UTR CCA 90 bp | AGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATTGTGAATCCCTGGGATaGAAACATCCGGAAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPKTKMVNKIVQRMLVGYCESLG*KHPETD Trigger: ATCTGTTTCCGGATGTTTCCATCCCAGGGATTCACA...ATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | CCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATAACATCTCTGTGAATCCCTaGGATGGAAACATCCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKTKMVNKIVQRMLVGYNISVNP*DGNIRK Trigger: TTTCCGGATGTTTCCATCCCAGGGATTCACAGAGAT...GTTATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | ACCTCAAATATTTTCAAGCTAACACCTTTGTGGCCTGGGAACGGATCTTTTAGAATCTCGTGCTTTATGTaGTATTCTTTGAGATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSNIFKLTPLWPGNGSFRISCFM*YSLRWF Trigger: GAACCATCTCAAAGAATACCACATAAAGCACGAGAT...TCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | TCGGCCGTTAAAGCATTTGCAAAAACCACATTCTACTTCTGCTTTATTGCACAAACTTTCTCAAGAGCTTaGATAGGTAGAAGTACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SAVKAFAKTTFYFCFIAQTFSRA*IGRSTL Trigger: AAGTGTACTTCTACCTATTCAAGCTCTTGAGAAAGT...TTGTGCAATAAAGCAGAAGTAGAATGTGGTTTTTGCAAATGCTTTAACGGCCGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | GAGACATTCATGGTCAAACTTTTCTCTAGATTACCCCAAATCTTGGTACTGTGTCAGATAGGAGAATTTTaGCTATACACTTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETFMVKLFSRLPQILVLCQIGEF*LYTSSS Trigger: GGAAGAAGAAGTGTATAGTCAAAATTCTCCTATCTG...ACACAGTACCAAGATTTGGGGTAATCTAGAGAAAAGTTTGACCATGAATGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR TCA 90 bp | AGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATCCCCTTCATAATCCTTaGTGTAGCCAACATATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPKTKMVNKIVQRMLVGYPLHNP*CSQHIW Trigger: CCAAATATGTTGGCTACATCAAGGATTATGAAGGGG...ATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CCA 90 bp | TGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGACTTCTTCTTCCAACATaGACAGAAACTTTGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WSPKTKMVNKIVQRMLVGLLLPT*TETLGN Trigger: ATTTCCCAAAGTTTCTGTCCATGTTGGAAGAAGAAG...TCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| 3UTR CAA 72 bp | TTCATGGTCAAACTTTTCTCTAGATTACCCCAAATCTaGGTACTGTGTGCAATTTCCTCACATACAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FMVKLFSRLPQI*VLCAISSHTGF Trigger: AAAACCTGTATGTGAGGAAATTGCACACAGTACCAAGATTTGGGGTAATCTAGAGAAAAGTTTGACCATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS GCA 90 bp | ACGCCGAGTTTCTCCAGCTTCTTCGCCCGCGGAGCAGAGCGCAACTaGGCCTTCTTCACGGCGATCCGGGCCGAGCCGCCTCCTCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TPSFSSFFARGAERN*AFFTAIRAEPPPPG Trigger: ACCGGGAGGAGGCGGCTCGGCCCGGATCGCCGTGAAGAAGGCGCAGTTGCGCTCTGCTCCGCGGGCGAAGAAGCTGGAGAAACTCGGCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CCA 90 bp | ACACCCCTGCGTTCTTCCAGCCGTGCCGCCTCATCTCTGGCCGAATaGGCTGACAGAAAATTGGTCTCTGGTCCAAGCATCCCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TPLRSSSRAASSLAE*ADRKLVSGPSIPAG Trigger: CCCTGCAGGGATGCTTGGACCAGAGACCAATTTTCTGTCAGCCCATTCGGCCAGAGATGAGGCGGCACGGCTGGAAGAACGCAGGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS TCA 90 bp | TGTTTGGTTTCTGGTTCAGGGAGTTGCCCACCACGTGGAATTCAATaGCACCCCTGCGTTCTTCCAGCCGTGCCGCCTCATCTCTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CLVSGSGSCPPRGIQ*HPCVLPAVPPHLWP Trigger: CGGCCAGAGATGAGGCGGCACGGCTGGAAGAACGCAGGGGTGTCATTGAATTCCACGTGGTGGGCAACTCCCTGAACCAGAAACCAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS TCA 90 bp | GAGACCGTAGTCTCCGCTGAGATGGAGCCTCCAGATGCCAGTAGTTaGTGCGGTTCAGAAACATCTTGGCCAGCTCGATCGTTGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETVVSAEMEPPDASS*CGSETSWPARSLSA Trigger: GGCAGACAACGATCGAGCTGGCCAAGATGTTTCTGAACCGCATCAACTACTGGCATCTGGAGGCTCCATCTCAGCGGAGACTACGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 90 bp | TTCTGGAGGCCCACGAGCCACATCAGGATCTTCTTGTTTGGTTTCTaGTTCAGGGAGTTGCCCACCACGTGGAATTCAATGACACCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FWRPTSHIRIFLFGF*FRELPTTWNSMTPL Trigger: CAGGGGTGTCATTGAATTCCACGTGGTGGGCAACTCCCTGAACCAGAAACCAAACAAGAAGATCCTGATGTGGCTCGTGGGCCTCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS GCA 90 bp | GCATGGCTACAGCTTCGACAGGATTCTGTCAAACTGACAATTATCTaGTGGAGGTCTCCTCTTGGTGGAGTAGGAGAGGGGTTAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AWLQLRQDSVKLTII*WRSPLGGVGEGLGF Trigger: GAACCCTAACCCCTCTCCTACTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTGACAGAATCCTGTCGAAGCTGTAGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 90 bp | TGGCTACAGCTTCGACAGGATTCTGTCAAACTGACAATTATCTGCTaGAGGTCTCCTCTTGGTGGAGTAGGAGAGGGGTTAGGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WLQLRQDSVKLTIIC*RSPLGGVGEGLGFF Trigger: GAAGAACCCTAACCCCTCTCCTACTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTGACAGAATCCTGTCGAAGCTGTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 90 bp | CTGCACGAAGTTGTTCACACCCTGTTCAATACTGGGCTTCTCAAATaGCGGCTTCTTCTCCAAGGAGCCTTCAACCACAGGTTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHEVVHTLFNTGLLK*RLLLQGAFNHRFSS Trigger: AGAGGAAAACCTGTGGTTGAAGGCTCCTTGGAGAAGAAGCCGCCATTTGAGAAGCCCAGTATTGAACAGGGTGTGAACAACTTCGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 90 bp | GAACTGAACAATGCTGTCCCAGTAACAGGAGGACTGATTACTGTTTaGATTCCTAGCGGGCTGGTTCTGGAAGAGGCTGAGAGAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ELNNAVPVTGGLITV*IPSGLVLEEAERKS Trigger: GGATTTTCTCTCAGCCTCTTCCAGAACCAGCCCGCTAGGAATCCAAACAGTAATCAGTCCTCCTGTTACTGGGACAGCATTGTTCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CCA 90 bp | GGATTCTGTCAAACTGACAATTATCTGCTGGAGGTCTCCTCTTGGTaGAGTAGGAGAGGGGTTAGGGTTCTTCCAGCCATTGCATTTACA | + |
|
Preference number: 5 (lower is better) Translates to: GFCQTDNYLLEVSSW*SRRGVRVLPAIAFT Trigger: TGTAAATGCAATGGCTGGAAGAACCCTAACCCCTCTCCTACTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTGACAGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 90 bp | ACAGGATTCTGTCAAACTGACAATTATCTGCTGGAGGTCTCCTCTTaGTGGAGTAGGAGAGGGGTTAGGGTTCTTCCAGCCATTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: TGFCQTDNYLLEVSS*WSRRGVRVLPAIAF Trigger: AAATGCAATGGCTGGAAGAACCCTAACCCCTCTCCTACTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTGACAGAATCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS-3UTR CAA 90 bp | ATATGGTTGTATATTAGTTGGTTTTTCCCAGAGTTGGGCTGGCAGGTGTCCCACCTTGTTCTCCCTCCATaGATCTGCTCATGGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IWLYISWFFPELGWQVSHLVLPP*ICSWEV Trigger: CACTTCCCATGAGCAGATCAATGGAGGGAGAACAAG...GTGGGACACCTGCCAGCCCAACTCTGGGAAAAACCAACTAATATACAACCATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | TATATTAGTTGGTTTTTCCCAGAGTTGGGCTGGCAGGTGTCCCACTTTTCTATGTGCCGAACTCCATCTTaGAAACACGAAAGTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YISWFFPELGWQVSHFSMCRTPS*KHESPG Trigger: CCCTGGACTTTCGTGTTTCAAAGATGGAGTTCGGCA...CATAGAAAAGTGGGACACCTGCCAGCCCAACTCTGGGAAAAACCAACTAATATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | GGGGAACCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTCTTCACTGGTTCTGCCGAACTCCATCTTaGAAACACGAAAGTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GEPYNFIISRSFCSLHWFCRTPS*KHESPG Trigger: CCCTGGACTTTCGTGTTTCAAAGATGGAGTTCGGCA...GAACCAGTGAAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171072.2 |
||
| CDS CCA 90 bp | TGTTCATTTGAGGTTACTGCACAGAAAACAATCTCTGTGAATCCCTaGGATGGAAACATCCGGAAACAGATACCACCAATGACACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSFEVTAQKTISVNP*DGNIRKQIPPMTRP Trigger: TGGCCGTGTCATTGGTGGTATCTGTTTCCGGATGTTTCCATCCCAGGGATTCACAGAGATTGTTTTCTGTGCAGTAACCTCAAATGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | GCAATTTCCTCACATACAGGTTTTGAGGAAGCCCCTGATCATCTACCATGCAATTTGTACTCCTTGCAGTaGGTGAACACTCGTTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AISSHTGFEEAPDHLPCNLYSLQ*VNTRCK Trigger: CTTGCAACGAGTGTTCACCAACTGCAAGGAGTACAA...ATTGCATGGTAGATGATCAGGGGCTTCCTCAAAACCTGTATGTGAGGAAATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CCA 90 bp | GAACCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTCTTCACTaGTTCCATGAAAGGCCAAGCATTTGGATGGTTCTTCACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPYNFIISRSFCSLH*FHERPSIWMVLHLL Trigger: CAGCAGGTGAAGAACCATCCAAATGCTTGGCCTTTCATGGAACCAGTGAAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | TGGTTGTATATTAGTTGGTTTTTCCCAGAGTTGGGCTGGCAGGTGTCCCACTTTTTGTACTGCACGAAGTaGTTCACACCCTGTTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: WLYISWFFPELGWQVSHFLYCTK*FTPCSI Trigger: TATTGAACAGGGTGTGAACAACTTCGTGCAGTACAA...AAAGTGGGACACCTGCCAGCCCAACTCTGGGAAAAACCAACTAATATACAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | AAATCGGTACAAAGCTGTTTTAAAACCAGTCTGAGACACTTAATGCAGCCTCTATCTGCATCTTCTTCTTaGTGGACGCAGGTGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSVQSCFKTSLRHLMQPLSASSS*WTQVKR Trigger: CCTCTTCACCTGCGTCCACAAAGAAGAAGATGCAGA...TAGAGGCTGCATTAAGTGTCTCAGACTGGTTTTAAAACAGCTTTGTACCGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | CAATACTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCATTCTGGTTCAGGGAGTaGCCCACCACGTGGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: QYSLRMSTQEITNFHRIPFWFRE*PTTWNS Trigger: TGAATTCCACGTGGTGGGCAACTCCCTGAACCAGAA...TGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | ACCTCAAATATTTTCAAGCTAACACCTTTGTGGCCTGGGAACGGATCTTTTAGATCAGGATCTTCTTGTTaGGTTTCTGGTTCAGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TSNIFKLTPLWPGNGSFRSGSSC*VSGSGS Trigger: ACTCCCTGAACCAGAAACCAAACAAGAAGATCCTGA...TCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | GCACTAAGCTGGAGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGAGTAGCACAACCACCTaGTGTAGTTTTCCTTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: ALSWSPKTKMVNKIVQRMSSTTT*CSFPCI Trigger: GATACAAGGAAAACTACACAAGGTGGTTGTGCTACT...CATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACTCCAGCTTAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | ACCTCAAATATTTTCAAGCTAACACCTTTGTGGCCTGGGAACGGATCTTTTAGAATTAAAGCAAGGGTTTaGTGTTTCGGGTCAAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: TSNIFKLTPLWPGNGSFRIKARV*CFGSKT Trigger: CGTCTTTGACCCGAAACACAAAACCCTTGCTTTAAT...TCTAAAAGATCCGTTCCCAGGCCACAAAGGTGTTAGCTTGAAAATATTTGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | CAGATCCATGGGGAACCTTATAACTTCATAATATCCCGGAGCTTCTGTTCTCTTGGTATTTTGATTTCTTaGGAGAAACCCTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QIHGEPYNFIISRSFCSLGILIS*EKPCFL Trigger: CAAGAAGCAGGGTTTCTCCAAAGAAATCAAAATACC...AAGAGAACAGAAGCTCCGGGATATTATGAAGTTATAAGGTTCCCCATGGATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171072.2 |
||
| CDS-3UTR CAA 90 bp | TCGGCCGTTAAAGCATTTGCAAAAACCACATTCTACTTCTGCTTTATTGCACAATTTTCTCTTTTCCACTaGGTTTCCAGCCTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAVKAFAKTTFYFCFIAQFSLFH*VSSLSL Trigger: GAGAGACAGGCTGGAAACCAAGTGGAAAAGAGAAAA...TTGTGCAATAAAGCAGAAGTAGAATGTGGTTTTTGCAAATGCTTTAACGGCCGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | CCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATAACTTTTTCCTGTCTGGCTaGTTCCAAGAGCTGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKTKMVNKIVQRMLVGYNFFLSG*FQELSS Trigger: AGACGACAGCTCTTGGAACAAGCCAGACAGGAAAAA...GTTATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | CAATACTCTTTAAGGATGTCTACCCAGGAAATAACAAACTTTCACAGGATACCATTCTCAAGAGGCAGTTaGTCTTTTTCCTGTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QYSLRMSTQEITNFHRIPFSRGS*SFSCLA Trigger: AGCCAGACAGGAAAAAGACAAACTGCCTCTTGAGAA...TGGTATCCTGTGAAAGTTTGTTATTTCCTGGGTAGACATCCTTAAAGAGTATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | CCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATAACAGCTGCTCAGGGTCTTaGGGCTCTTTACTTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKTKMVNKIVQRMLVGYNSCSGS*GSLLFS Trigger: AGAGAAAAGTAAAGAGCCCAAAGACCCTGAGCAGCT...GTTATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS-3UTR CAA 90 bp | AAATCGGTACAAAGCTGTTTTAAAACCAGTCTGAGACACTTAATGCAGCCTCTACCAGATAGGAGAATTTaGACTATACACTTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSVQSCFKTSLRHLMQPLPDRRI*TIHFFF Trigger: GAAGAAGAAGTGTATAGTCAAAATTCTCCTATCTGG...TAGAGGCTGCATTAAGTGTCTCAGACTGGTTTTAAAACAGCTTTGTACCGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS-3UTR CAA 90 bp | AGTCCCAAGACAAAAATGGTTAATAAGATTGTACAGCGAATGTTAGTGGGATATGGTATTTTGATTTCTTaGGAGAAACCCTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPKTKMVNKIVQRMLVGYGILIS*EKPCFL Trigger: CAAGAAGCAGGGTTTCTCCAAAGAAATCAAAATACC...ATATCCCACTAACATTCGCTGTACAATCTTATTAACCATTTTTGTCTTGGGACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS GCA 72 bp | TTCTCCAGCTTCTTCGCCCGCGGAGCAGAGCGCAACTaGGCCTTCTTCACGGCGATCCGGGCCGAGCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FSSFFARGAERN*AFFTAIRAEPP Trigger: AGGCGGCTCGGCCCGGATCGCCGTGAAGAAGGCGCAGTTGCGCTCTGCTCCGCGGGCGAAGAAGCTGGAGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CCA 72 bp | CACCCCTGCGTTCTTCCAGCCGTGCCGCCTCATCTCTaGCCGAATGGGCTGACAGAAAATTGGTCTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HPCVLPAVPPHL*PNGLTENWSLV Trigger: GACCAGAGACCAATTTTCTGTCAGCCCATTCGGCCAGAGATGAGGCGGCACGGCTGGAAGAACGCAGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS TCA 72 bp | TTCCAGCCGTGCCGCCTCATCTCTGGCCGAATGGGCTaGCAGAAAATTGGTCTCTGGTCCAAGCATCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FQPCRLISGRMG*QKIGLWSKHPC Trigger: GCAGGGATGCTTGGACCAGAGACCAATTTTCTGTCAGCCCATTCGGCCAGAGATGAGGCGGCACGGCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS TCA 72 bp | TCTGGTTCAGGGAGTTGCCCACCACGTGGAATTCAATaGCACCCCTGCGTTCTTCCAGCCGTGCCGCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SGSGSCPPRGIQ*HPCVLPAVPPH Trigger: ATGAGGCGGCACGGCTGGAAGAACGCAGGGGTGTCATTGAATTCCACGTGGTGGGCAACTCCCTGAACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CAA 90 bp | TCTCCTCTTGGTGGAGTAGGAGAGGGGTTAGGGTTCTTCCAGCCATaGCATTTACAGGACTCCTCTGCCTTGCAGGCGGAGTACACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPLGGVGEGLGFFQP*HLQDSSALQAEYTP Trigger: CGGCGTGTACTCCGCCTGCAAGGCAGAGGAGTCCTGTAAATGCAATGGCTGGAAGAACCCTAACCCCTCTCCTACTCCACCAAGAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CCA 72 bp | CGTTCTTCCAGCCGTGCCGCCTCATCTCTGGCCGAATaGGCTGACAGAAAATTGGTCTCTGGTCCAAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RSSSRAASSLAE*ADRKLVSGPSI Trigger: GATGCTTGGACCAGAGACCAATTTTCTGTCAGCCCATTCGGCCAGAGATGAGGCGGCACGGCTGGAAGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CAA 72 bp | GGTGGAGTAGGAGAGGGGTTAGGGTTCTTCCAGCCATaGCATTTACAGGACTCCTCTGCCTTGCAGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGVGEGLGFFQP*HLQDSSALQAE Trigger: CTCCGCCTGCAAGGCAGAGGAGTCCTGTAAATGCAATGGCTGGAAGAACCCTAACCCCTCTCCTACTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS TCA 72 bp | GTCTCCGCTGAGATGGAGCCTCCAGATGCCAGTAGTTaGTGCGGTTCAGAAACATCTTGGCCAGCTCGATCG | + |
|
Preference number: 6 (lower is better) Translates to: VSAEMEPPDASS*CGSETSWPARS Trigger: CGATCGAGCTGGCCAAGATGTTTCTGAACCGCATCAACTACTGGCATCTGGAGGCTCCATCTCAGCGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
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| CDS CAA 72 bp | TCTGGAGGCCCACGAGCCACATCAGGATCTTCTTGTTaGGTTTCTGGTTCAGGGAGTTGCCCACCACGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGGPRATSGSSC*VSGSGSCPPRG Trigger: TCCACGTGGTGGGCAACTCCCTGAACCAGAAACCAAACAAGAAGATCCTGATGTGGCTCGTGGGCCTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CCA 72 bp | TTGTTTGGTTTCTGGTTCAGGGAGTTGCCCACCACGTaGAATTCAATGACACCCCTGCGTTCTTCCAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LFGFWFRELPTT*NSMTPLRSSSR Trigger: ACGGCTGGAAGAACGCAGGGGTGTCATTGAATTCCACGTGGTGGGCAACTCCCTGAACCAGAAACCAAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CAA 72 bp | GGTGGAGTAGGAGAGGGGTTAGGGTTCTTCCAGCCATaGCATTTACAGGACTCCTCTGCCATTTCAGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: GGVGEGLGFFQP*HLQDSSAISGL Trigger: GAGTCCTGAAATGGCAGAGGAGTCCTGTAAATGCAATGGCTGGAAGAACCCTAACCCCTCTCCTACTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164390.2 |
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| CDS CAA 90 bp | ACGAGCCACATCAGGATCTTCTTGTTTGGTTTCTGGTTCAGGGAGTaGCCCACCACGTGGAATTCAATGACACCCCTGCGTTCTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSHIRIFLFGFWFRE*PTTWNSMTPLRSSS Trigger: GCTGGAAGAACGCAGGGGTGTCATTGAATTCCACGTGGTGGGCAACTCCCTGAACCAGAAACCAAACAAGAAGATCCTGATGTGGCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS TCA 72 bp | GGGCATGGCTACAGCTTCGACAGGATTCTGTCAAACTaGCAATTATCTGCTGGAGGTCTCCTCTTGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHGYSFDRILSN*QLSAGGLLLVE Trigger: CTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTGACAGAATCCTGTCGAAGCTGTAGCCATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS GCA 72 bp | CAGCTTCGACAGGATTCTGTCAAACTGACAATTATCTaGTGGAGGTCTCCTCTTGGTGGAGTAGGAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QLRQDSVKLTII*WRSPLGGVGEG Trigger: CCCCTCTCCTACTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTGACAGAATCCTGTCGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 72 bp | TGTCAAACTGACAATTATCTGCTGGAGGTCTCCTCTTaGTGGAGTAGGAGAGGGGTTAGGGTTCTTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CQTDNYLLEVSS*WSRRGVRVLPA Trigger: GGCTGGAAGAACCCTAACCCCTCTCCTACTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 72 bp | GTTGTTCACACCCTGTTCAATACTGGGCTTCTCAAATaGCGGCTTCTTCTCCAAGGAGCCTTCAACCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VVHTLFNTGLLK*RLLLQGAFNHR Trigger: CCTGTGGTTGAAGGCTCCTTGGAGAAGAAGCCGCCATTTGAGAAGCCCAGTATTGAACAGGGTGTGAACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 72 bp | AGACCGAGCGAAGCAATGTTCTCCCAAACACCTTTGTaGTTTCGTACCGAGGTAAGCTGTCACAGAACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPSEAMFSQTPL*FRTEVSCHRTA Trigger: CGCAGTTCTGTGACAGCTTACCTCGGTACGAAACCACAAAGGTGTTTGGGAGAACATTGCTTCGCTCGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CCA 72 bp | AATGCTGTCCCAGTAACAGGAGGACTGATTACTGTTTaGATTCCTAGCGGGCTGGTTCTGGAAGAGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NAVPVTGGLITV*IPSGLVLEEAE Trigger: CTCAGCCTCTTCCAGAACCAGCCCGCTAGGAATCCAAACAGTAATCAGTCCTCCTGTTACTGGGACAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CCA 72 bp | ATTCCACGGGAATATCCCCCATCACTCGAGATCTCTTaGCCTCCTCGGGAGCATGAGAGTTGTTCATTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IPREYPPSLEIS*PPREHESCSFS Trigger: GGAAAATGAACAACTCTCATGCTCCCGAGGAGGCCAAGAGATCTCGAGTGATGGGGGATATTCCCGTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000166525.2 |
||
| CDS CCA 72 bp | CCCACGAGCCACATCAGGATCTTCTTGTTTGGTTTCTaGTTCAGGGAGTTGCCCACCACGTGGAATTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: PTSHIRIFLFGF*FRELPTTWNSM Trigger: CATTGAATTCCACGTGGTGGGCAACTCCCTGAACCAGAAACCAAACAAGAAGATCCTGATGTGGCTCGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CAA 90 bp | AAGCGTGCGTTTCTCAAGAGGCAGTTTGTCTTTTTCCTGTCTGGCTaGTTCCAAGAGCTGTCGTCTCATGATGGTGAAGACCGAGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KRAFLKRQFVFFLSG*FQELSSHDGEDRAK Trigger: CTTCGCTCGGTCTTCACCATCATGAGACGACAGCTCTTGGAACAAGCCAGACAGGAAAAAGACAAACTGCCTCTTGAGAAACGCACGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
||
| CDS CCA 72 bp | CAAACTGACAATTATCTGCTGGAGGTCTCCTCTTGGTaGAGTAGGAGAGGGGTTAGGGTTCTTCCAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: QTDNYLLEVSSW*SRRGVRVLPAI Trigger: AATGGCTGGAAGAACCCTAACCCCTCTCCTACTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CCA 72 bp | TGTACTGCACGAAGTTGTTCACACCCTGTTCAATACTaGGCTTCTCAAATGGCGGCTTCTTCTCCAAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CTARSCSHPVQY*ASQMAASSPRS Trigger: GCTCCTTGGAGAAGAAGCCGCCATTTGAGAAGCCCAGTATTGAACAGGGTGTGAACAACTTCGTGCAGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
||
| CDS CAA 90 bp | TCAAGCCCAGAAGAGCCTCTGCATCCAGGACTTGTTCTCCCTCCATaGATCTGCTCATGGGAAGTGGAATTTGAACTGAACAATGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSPEEPLHPGLVLPP*ICSWEVEFELNNAV Trigger: GACAGCATTGTTCAGTTCAAATTCCACTTCCCATGAGCAGATCAATGGAGGGAGAACAAGTCCTGGATGCAGAGGCTCTTCTGGGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CCA 72 bp | CTTCGACAGGATTCTGTCAAACTGACAATTATCTGCTaGAGGTCTCCTCTTGGTGGAGTAGGAGAGGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LRQDSVKLTIIC*RSPLGGVGEGL Trigger: TAACCCCTCTCCTACTCCACCAAGAGGAGACCTCCAGCAGATAATTGTCAGTTTGACAGAATCCTGTCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
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| CDS CCA 72 bp | TTGTGTAGTTTTCCTTGTATCCAGAGATGTCATCATTaGGAGACCGTAGTCTCCGCTGAGATGGAGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LCSFPCIQRCHH*ETVVSAEMEPP Trigger: TGGAGGCTCCATCTCAGCGGAGACTACGGTCTCCCAATGATGACATCTCTGGATACAAGGAAAACTACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000724.15 ENSMUST00000164390.2 |
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| CDS CAA 72 bp | GAAGAGCCTCTGCATCCAGGACTTGTTCTCCCTCCATaGATCTGCTCATGGGAAGTGGAATTTGAACTGAAC | + |
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Preference number: 6 (lower is better) Translates to: EEPLHPGLVLPP*ICSWEVEFELN Trigger: GTTCAGTTCAAATTCCACTTCCCATGAGCAGATCAATGGAGGGAGAACAAGTCCTGGATGCAGAGGCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CAA 90 bp | TTTGGGAAATGTGTGAGGATAAGCGTGCGTTTCTCAAGAGGCAGTTaGTCTTTTTCCTGTCTGGCTTGTTCCAAGAGCTGTCGTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: FGKCVRISVRFSRGS*SFSCLACSKSCRLM Trigger: CATGAGACGACAGCTCTTGGAACAAGCCAGACAGGAAAAAGACAAACTGCCTCTTGAGAAACGCACGCTTATCCTCACACATTTCCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CCA 72 bp | CATCCAGGACTTGTTCTCCCTCCATTGATCTGCTCATaGGAAGTGGAATTTGAACTGAACAATGCTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: HPGLVLPPLICS*EVEFELNNAVP Trigger: TGGGACAGCATTGTTCAGTTCAAATTCCACTTCCCATGAGCAGATCAATGGAGGGAGAACAAGTCCTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CCA 72 bp | TACTGCACAGAAAACAATCTCTGTGAATCCCTGGGATaGAAACATCCGGAAACAGATACCACCAATGACACG | + |
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Preference number: 6 (lower is better) Translates to: YCTENNLCESLG*KHPETDTTNDT Trigger: CGTGTCATTGGTGGTATCTGTTTCCGGATGTTTCCATCCCAGGGATTCACAGAGATTGTTTTCTGTGCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CCA 72 bp | GAGGTTACTGCACAGAAAACAATCTCTGTGAATCCCTaGGATGGAAACATCCGGAAACAGATACCACCAATG | + |
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Preference number: 6 (lower is better) Translates to: EVTAQKTISVNP*DGNIRKQIPPM Trigger: CATTGGTGGTATCTGTTTCCGGATGTTTCCATCCCAGGGATTCACAGAGATTGTTTTCTGTGCAGTAACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS TCA 72 bp | GTTCATTTGAGGTTACTGCACAGAAAACAATCTCTGTaGATCCCTGGGATGGAAACATCCGGAAACAGATAC | + |
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Preference number: 6 (lower is better) Translates to: VHLRLLHRKQSL*IPGMETSGNRY Trigger: GTATCTGTTTCCGGATGTTTCCATCCCAGGGATTCACAGAGATTGTTTTCTGTGCAGTAACCTCAAATGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CCA 72 bp | AACTTCATAATATCCCGGAGCTTCTGTTCTCTTCACTaGTTCCATGAAAGGCCAAGCATTTGGATGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NFIISRSFCSLH*FHERPSIWMVL Trigger: AAGAACCATCCAAATGCTTGGCCTTTCATGGAACCAGTGAAGAGAACAGAAGCTCCGGGATATTATGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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| CDS CCA 72 bp | ACTATACACTTCTTCTTCCAACATGGACAGAAACTTTaGGAAATGTGTGAGGATAAGCGTGCGTTTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TIHFFFQHGQKL*EMCEDKRAFLK Trigger: CTTGAGAAACGCACGCTTATCCTCACACATTTCCCAAAGTTTCTGTCCATGTTGGAAGAAGAAGTGTATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000724.15 |
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