RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KAT2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020918

Ensembl transcript IDs: ENSMUST00000006973.12, ENSMUST00000103118.4

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGAAGGCTACTCACTaGATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAG +
Preference number: 1 (lower is better)
Translates to: HGSSSLGCFHVKATH*IVLALGNRHGDQAQ
Trigger: CTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAGTGAGTAGCCTTCACATGGAAACAGCCCAGACTGGAGGAACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR CCA 90 bp ACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTaGCTTGGGAGTGAGTGCCTGCTGGCCAGAAAGTCTGTAAGATCT +
Preference number: 1 (lower is better)
Translates to: TSPQGGMQGRWKESC*LGSECLLARKSVRS
Trigger: AGATCTTACAGACTTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp GGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCCTGAGGAGATGGAGGTaGATGTTGCGGATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: GPWLEFLQLSPGEGAGSPLRRWR*MLRIPA
Trigger: AGCTGGGATCCGCAACATCCACCTCCATCTCCTCAG...GGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR TCA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCACTGCTGGCTTGGGAGTaGGTGCCTGCTGGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSLLAWE*VPAGQK
Trigger: TTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAG...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR GCA 90 bp CCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTAGGACCAACAGTTCATaGCCTGGCCACCAGACATTC +
Preference number: 2 (lower is better)
Translates to: PWETGMGTRLRMLSLHGSRTNSS*PGHQTF
Trigger: GAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCT...AGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR GCA 90 bp TCACTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTGGCTTGGGAGTGAGTaGCTGCTGGCCAGAAAGTCT +
Preference number: 2 (lower is better)
Translates to: SLNSPGPGKQAWGPGSGCWLGSE*LLARKS
Trigger: AGACTTTCTGGCCAGCAGGCACTCACTCCCAAGCCA...GCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp TTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCACGGATCTGAGGAGATaGAGGTGGATGTTGCGGATC +
Preference number: 2 (lower is better)
Translates to: FMPWPPDILQRAGPRPDVTDLRR*RWMLRI
Trigger: GATCCGCAACATCCACCTCCATCTCCTCAGATCCGT...GACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp TCACTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTGGAAAGAGAGCTGCTaGCTTGGGAGTGAGTGCCTG +
Preference number: 2 (lower is better)
Translates to: SLNSPGPGKQAWGPGSGCWKESC*LGSECL
Trigger: CAGGCACTCACTCCCAAGCCAGCAGCTCTCTTTCCA...GCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGACGTCTCCCCAAGGTaGGATGCAAGGAAGGTGGAA +
Preference number: 2 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSDVSPR*DARKVE
Trigger: TTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTC...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp CCTGCTGGCCAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGGAGATGGAGGTaGATGTTGCGGATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: PAGQKVCKIWGPWLEFLQLRRWR*MLRIPA
Trigger: AGCTGGGATCCGCAACATCCACCTCCATCTCCTCAG...CTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTGGCCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp AGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTGAAGATCTGGGGTCCCTaGCTGGAGTTTCTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: RPDVSPRWDARKVERELLKIWGP*LEFLQL
Trigger: CAGCTGGAGAAACTCCAGCCAGGGACCCCAGATCTT...CAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp CCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTAAAGTCTGTAAGATCTaGGGTCCCTGGCTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: PWETGMGTRLRMLSLHGSKVCKI*GPWLEF
Trigger: AAACTCCAGCCAGGGACCCCAGATCTTACAGACTTT...AGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR TCA 90 bp CTGCATGGCTCTATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACCTGCTGGCTTGGGAGTaGGTGCCTGCTGGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: LHGSIRTNSSCPGHQTFYLLAWE*VPAGQK
Trigger: TTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAG...GTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTATAGAGCCATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR GCA 90 bp ATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCAGGTGGAAAGAGAGCTaGTGGCTTGGGAGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: IRTNSSCPGHQTFYNGLARWKES*WLGSEC
Trigger: GCACTCACTCCCAAGCCAGCAGCTCTCTTTCCACCT...GGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR GCA 90 bp AGACAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGAGGTGGAAAGAGAGCTaGTGGCTTGGGAGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: RQQCRISQGPSWFLQSGLRWKES*WLGSEC
Trigger: GCACTCACTCCCAAGCCAGCAGCTCTCTTTCCACCT...CAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp AGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGAAGGCTACGGGATGCAAGGAAGGTaGAAAGAGAGCTGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: SQGPSWFLQSGLFPCEGYGMQGR*KESCWL
Trigger: AAGCCAGCAGCTCTCTTTCCACCTTCCTTGCATCCC...GTAGCCTTCACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCAAAGTCTGTAAGATCTaGGGTCCCTGGCTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCKVCKI*GPWLEF
Trigger: AAACTCCAGCCAGGGACCCCAGATCTTACAGACTTT...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTGACGTCTCCCCAAGGTaGGATGCAAGGAAGGTGGAA +
Preference number: 2 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFDVSPR*DARKVE
Trigger: TTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTC...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR GCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTAGGACCAACAGTTCATaGCCTGGCCACCAGACATTC +
Preference number: 2 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFRTNSS*PGHQTF
Trigger: GAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCT...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR-3UTR CCA 90 bp AAAAGCTTTATTGTTCCCTCCGAGGGATTAATGCCAAGGAATGAATGGTCCTCCACGGATCTGAGGAGATaGAGGTGGATGTTGCGGATC +
Preference number: 2 (lower is better)
Translates to: KSFIVPSEGLMPRNEWSSTDLRR*RWMLRI
Trigger: GATCCGCAACATCCACCTCCATCTCCTCAGATCCGT...GGAGGACCATTCATTCCTTGGCATTAATCCCTCGGAGGGAACAATAAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR CCA 72 bp GTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTaGCCCCAGACCAGACGTCTCCCCAAGGTGGGATGC +
Preference number: 3 (lower is better)
Translates to: VHALATRHSTTG*PQTRRLPKVGC
Trigger: GCATCCCACCTTGGGGAGACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR CCA 72 bp GACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTaGAAAGAGAGCTGCTGGCTTGGGAGTGAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: DQTSPQGGMQGR*KESCWLGSECL
Trigger: CAGGCACTCACTCCCAAGCCAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR CCA 72 bp AGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATaGCTCTATAAGGACCAACAGTTCATGCCCTGGCCA +
Preference number: 3 (lower is better)
Translates to: RHGDQAQDAQPA*LYKDQQFMPWP
Trigger: TGGCCAGGGCATGAACTGTTGGTCCTTATAGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR CCA 72 bp TACTCACTGAATAGTCCTGGCCCTGGGAAACAGGCATaGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCT +
Preference number: 3 (lower is better)
Translates to: YSLNSPGPGKQA*GPGSGCSACMA
Trigger: AGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAGTGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR CCA 72 bp CAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTaGCTTGGGAGTGAGTGCCTGCTGGCCAGAAAGTCT +
Preference number: 3 (lower is better)
Translates to: QGGMQGRWKESC*LGSECLLARKS
Trigger: AGACTTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
3UTR CCA 72 bp GATAGACAACAGTGTAGGATAAGCCAAGGCCCCTCATaGTTCCTCCAGTCTGGGCTGTTTCCATGTGAAGGC +
Preference number: 3 (lower is better)
Translates to: DRQQCRISQGPS*FLQSGLFPCEG
Trigger: GCCTTCACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTGTCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp TGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCGCCCCCACTCCCTGTaGTCCCAGCTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WGPWLEFLQLSPGEGAGSRPHSL*SQLGLQ
Trigger: CTGCAGCCCCAGCTGGGAGCACAGGGAGTGGGGGCG...GCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCGCAGGAGTCGAAGTTaGGGCAGGGGCTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LGSLAGVSPAESGRGGRERRSRS*GRGWGV
Trigger: CACTCCCCAGCCCCTGCCCCAACTTCGACTCCTGCG...CTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp GGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCCCAGGCACTGGGGTGTaGCTTGATCTGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPWLEFLQLSPGEGAGSPPGTGV*LDLSQQ
Trigger: CTGCTGGCTCAGATCAAGTCACACCCCAGTGCCTGG...GGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCCTTCCTCTTCTCCCCTaGTGGCATGGGCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GPWLEFLQLSPGEGAGSPLPLLP*WHGLSP
Trigger: GGGACTGAGCCCATGCCAGCAGGGGAGAAGAGGAAG...GGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCTTCCTCTTCTCCCCTaGCATGGGCTCAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGSLAGVSPAESGRGGRELPLLP*HGLSPC
Trigger: GCAGGGACTGAGCCCATGCCAGGGGAGAAGAGGAAG...CTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006973.12
CDS-3UTR GCA 90 bp TTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCTGGGGCAGGGGCTGGTaGCGGAGTCGGAGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: FMPWPPDILQRAGPRPDVWGRGW*RSRSRS
Trigger: ACTCCGGCTCCGACTCCGGCACCAGCCCCTGCCCCA...GACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGTGGTCCGCCAAAGGGTaGTCACAGCTACGGCACAAC +
Preference number: 4 (lower is better)
Translates to: LGSLAGVSPAESGRGGREWSAKG*SQLRHN
Trigger: GTTGTGCCGTAGCTGTGAGCACCCTTTGGCGGACCA...CTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp TGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCTGGTCCGCCAAAGGGTaGTCACAGCTACGGCACAAC +
Preference number: 4 (lower is better)
Translates to: WGPWLEFLQLSPGEGAGSWSAKG*SQLRHN
Trigger: GTTGTGCCGTAGCTGTGAGCACCCTTTGGCGGACCA...GCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCTGCAGCACGCGCCGGTTaGCCTTGGGCGTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SCPGHQTFYNGLAPDQTSAARAG*PWASGS
Trigger: ACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCTGC...AGACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp TGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCGGGTGTGACTTGATCTaGGCCAGCAGGTTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: WGPWLEFLQLSPGEGAGSGCDLI*ASRFLR
Trigger: CCTCAAAAACCTGCTGGCTCAGATCAAGTCACACCC...GCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp GGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGCCCGGCAGTTGGCGATaGCCCGCTGCAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GPTVHALATRHSTTGWPQPGSWR*PAAGQL
Trigger: TAGCTGACCTGCAGCGGGTCATCGCCAACTGCCGGG...CTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp GGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGCTCTGGCTAGCGCGCTaGTGCTGGCTCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GPTVHALATRHSTTGWPQLWLAR*CWLRPG
Trigger: ACCTGGCCTGAGCCAGCAGCAGCGCGCTAGCCAGAG...CTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp TTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCCTCTGGCTAGCGCGCTaGTGCTGGCTCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FMPWPPDILQRAGPRPDVLWLAR*CWLRPG
Trigger: ACCTGGCCTGAGCCAGCAGCAGCGCGCTAGCCAGAG...GACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp TTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCGGCAGACCCCGGACTTaGGCCTTCCTCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: FMPWPPDILQRAGPRPDVGRPRT*AFLWLA
Trigger: CGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCC...GACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp GGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCGACCTTGCGGATCTGTaGCTGTTTGCGCTCAATCAA +
Preference number: 4 (lower is better)
Translates to: GPWLEFLQLSPGEGAGSPDLADL*LFALNQ
Trigger: TTGATTGAGCGCAAACAGGCACAGATCCGCAAGGTC...GGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCGACACATTCTCCAGGTaGGACACATGGTCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: WGPWLEFLQLSPGEGAGSDTFSR*DTWSAK
Trigger: TTTGGCGGACCATGTGTCCCACCTGGAGAATGTGTC...GCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCGGCCAAACACGTGGGTaGTCTCGTAGCGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FMPWPPDILQRAGPRPDVGQTRG*SRSGGG
Trigger: GCCTCCCCCGCTACGAGACCACCCACGTGTTTGGCC...GACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCGAGTTGCCAATGACGTaGAACTCGATGATTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GPWLEFLQLSPGEGAGSPELPMT*NSMIPR
Trigger: GCGAGGAATCATCGAGTTCCACGTCATTGGCAACTC...GGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCGCAGCACGCGCCGGTTaGCCTTGGGCGTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCAARAG*PWASGS
Trigger: ACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCTGC...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp AGACAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTGGGGCAGGGGCTGGTaGCGGAGTCGGAGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: RQQCRISQGPSWFLQSGLWGRGW*RSRSRS
Trigger: ACTCCGGCTCCGACTCCGGCACCAGCCCCTGCCCCA...CAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp TCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCCACCAGATGGGAGAATTTaGCCCGTAGATCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLAGVSPAESGRGGREPPPDGRI*PVDLFL
Trigger: GAGGAAGAGATCTACGGGGCAAATTCTCCCATCTGG...TGGGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCACGCAGGAGTCGAAGTTaGGGCAGGGGCTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSRRSRS*GRGWGV
Trigger: CACTCCCCAGCCCCTGCCCCAACTTCGACTCCTGCG...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp AGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTGCTAGCGCGCTGCTGCTaGCTCAGGCCAGGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RPDVSPRWDARKVERELLLARCC*LRPGRA
Trigger: GGCTCGACCTGGCCTGAGCCAGCAGCAGCGCGCTAG...CAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCTCACGCGGAGCCGCTTaGCATCCTCCAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FMPWPPDILQRAGPRPDVSRGAA*HPPGSG
Trigger: ACCTGACCCTGGAGGATGCCAAGCGGCTCCGCGTGA...GACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp TCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCCAAGGTTTCATTGGCCTTaGAAGCTGAGAAGACCCCTA +
Preference number: 4 (lower is better)
Translates to: SLAGVSPAESGRGGREPPRFHWP*KLRRPL
Trigger: TAGGGGTCTTCTCAGCTTGCAAGGCCAATGAAACCT...TGGGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp TCACTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCAGGTTGGCAGCTGGCTaGTGGAGGTCCATGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SLNSPGPGKQAWGPGSGCRLAAG*WRSMRG
Trigger: ACCCCGCATGGACCTCCAGCAGCCAGCTGCCAACCT...GCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCACTTGCGCCTTCCTCTaGCTAGCGCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCTCAFL*LARCCW
Trigger: CCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGT...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp GGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCACTTGCAGGTTTCATTaGCCTTGCAAGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GPWLEFLQLSPGEGAGSPTCRFH*PCKLRR
Trigger: TCTTCTCAGCTTGCAAGGCCAATGAAACCTGCAAGT...GGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CCTGCTGGCCAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGTTGGCAGCTGGCTGCTaGAGGTCCATGCGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PAGQKVCKIWGPWLEFLQLAAGC*RSMRGA
Trigger: CGCACCCCGCATGGACCTCCAGCAGCCAGCTGCCAA...CTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTGGCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTATTCACGCGGAGCCGCTTaGCATCCTCCAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LGNRHGDQAQDAQPAWLYSRGAA*HPPGSG
Trigger: ACCTGACCCTGGAGGATGCCAAGCGGCTCCGCGTGA...ATAGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp TGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCGAGCAGGAACATCTTTaGGAGCTCAAACATTGTCTG +
Preference number: 4 (lower is better)
Translates to: WGPWLEFLQLSPGEGAGSEQEHL*ELKHCL
Trigger: CAGACAATGTTTGAGCTCTCAAAGATGTTCCTGCTC...GCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp AGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGAAGGCTACAGGTTGGCAGCTGGCTaGTGGAGGTCCATGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SQGPSWFLQSGLFPCEGYRLAAG*WRSMRG
Trigger: ACCCCGCATGGACCTCCAGCAGCCAGCTGCCAACCT...GTAGCCTTCACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp GAGAGCTGCTGGCTTGGGAGTGAGTGCCTGCTGGCCAGAAAGTCTGTAAGATCTTTGGCAGCTGGCTGCTaGAGGTCCATGCGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ESCWLGSECLLARKSVRSLAAGC*RSMRGA
Trigger: CGCACCCCGCATGGACCTCCAGCAGCCAGCTGCCAA...AGATCTTACAGACTTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CCTGCTGGCCAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGGCTCAGGTTGGCAGCTaGCTGCTGGAGGTCCATGCG +
Preference number: 4 (lower is better)
Translates to: PAGQKVCKIWGPWLEFLQAQVGS*LLEVHA
Trigger: CGCATGGACCTCCAGCAGCCAGCTGCCAACCTGAGC...CTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTGGCCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp ATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCGCGCCGGTTGGCCTTaGGCGTCAGGGAGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: IRTNSSCPGHQTFYNGLARAGWP*ASGSCQ
Trigger: TTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCG...GGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp AGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTGCCGAAGGTGGCATGGTaGAGCCTGACTCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: RPDVSPRWDARKVERELLPKVAW*SLTPRW
Trigger: CCATCTGGGAGTCAGGCTTCACCATGCCACCTTCGG...CAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp AGACAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGGTACAACTGTTGCACTaGCCGTGGCTGGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RQQCRISQGPSWFLQSGLVQLLH*PWLAGA
Trigger: TGCCCCGGCCAGCCACGGTCAGTGCAACAGTTGTAC...CAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp GAGAGCTGCTGGCTTGGGAGTGAGTGCCTGCTGGCCAGAAAGTCTGTAAGATCTGTACAACTGTTGCACTaGCCGTGGCTGGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: ESCWLGSECLLARKSVRSVQLLH*PWLAGA
Trigger: TGCCCCGGCCAGCCACGGTCAGTGCAACAGTTGTAC...AGATCTTACAGACTTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGAAAGGATGCTGTGTTTaGTGTGGTACTCCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: LGSLAGVSPAESGRGGREKGCCV*CGTPLG
Trigger: ACCTAAAGGAGTACCACATCAAACACAGCATCCTTT...CTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTCTCCTTCATAGTCCTTaGTGTAGCCCAGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: PWETGMGTRLRMLSLHGSLLHSP*CSPDSG
Trigger: GCCGCTATCTGGGCTACATCAAGGACTATGAAGGAG...AGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCCGGCAGTTGGCGATaGCCCGCTGCAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFPGSWR*PAAGQL
Trigger: TAGCTGACCTGCAGCGGGTCATCGCCAACTGCCGGG...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CATGGCTCTATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACCGCCCCCACTCCCTGTaGTCCCAGCTGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HGSIRTNSSCPGHQTFYNRPHSL*SQLGLQ
Trigger: CTGCAGCCCCAGCTGGGAGCACAGGGAGTGGGGGCG...GTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTATAGAGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTTGGCTAGCGCGCTGCTaGTGGCTCAGGCCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFWLARC*WLRPGR
Trigger: TCGACCTGGCCTGAGCCAGCAGCAGCGCGCTAGCCA...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTGGCAGACCCCGGACTTaGGCCTTCCTCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFGRPRT*AFLWLA
Trigger: CGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCC...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCACGTCTCATCTCGAGCTaGGTTGGCCGAAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSRLISS*VGRKQA
Trigger: AGCCTGCTTTCGGCCAACGCAGCTCGAGATGAGACG...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTATTTGGCGATGACCCGCTaGAGGTCAGCTACGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGNRHGDQAQDAQPAWLYLAMTR*RSATKS
Trigger: GCTCTTCGTAGCTGACCTGCAGCGGGTCATCGCCAA...ATAGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp GAGAGCTGCTGGCTTGGGAGTGAGTGCCTGCTGGCCAGAAAGTCTGTAAGATCTACTTGCGCCTTCCTCTaGCTAGCGCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESCWLGSECLLARKSVRSTCAFL*LARCCW
Trigger: CCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGT...AGATCTTACAGACTTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCGTTTCTCAAGCTTCTTaGCACGCGGCAGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCVSQAS*HAADPG
Trigger: TCCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAAAC...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTATGTTTCTCAAGCTTCTTaGCACGCGGCAGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: LGNRHGDQAQDAQPAWLYVSQAS*HAADPG
Trigger: TCCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAAAC...ATAGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp GGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGAGACCCCTCCACCACTaGCCGTGTCATCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GPTVHALATRHSTTGWPQRPLHH*PCHLQN
Trigger: ATTCTGCAGATGACACGGCCAGTGGTGGAGGGGTCT...CTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGGCCAAACACGTGGGTaGTCTCGTAGCGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CRISQGPSWFLQSGLFPCGQTRG*SRSGGG
Trigger: GCCTCCCCCGCTACGAGACCACCCACGTGTTTGGCC...ACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp ATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCTCTTCTCCCCTGCTaGCATGGGCTCAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: IRTNSSCPGHQTFYNGLAPLLPC*HGLSPC
Trigger: GCAGGGACTGAGCCCATGCCAGCAGGGGAGAAGAGG...GGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGTGGCTAAATTTGTACTaGACAAAGTTCAGTACACCC +
Preference number: 4 (lower is better)
Translates to: LGSLAGVSPAESGRGGREWLNLY*TKFSTP
Trigger: GGGTGTACTGAACTTTGTGCAGTACAAATTTAGCCA...CTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CCTGCTGGCCAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGCGTCTCATCTCGAGCTaGGTTGGCCGAAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PAGQKVCKIWGPWLEFLQRLISS*VGRKQA
Trigger: AGCCTGCTTTCGGCCAACGCAGCTCGAGATGAGACG...CTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTGGCCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTGGGAAAAGACATTCTaGAGCCCCACGAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCWEKTF*SPTSQS
Trigger: GCTCTGGCTCGTGGGGCTGCAGAATGTCTTTTCCCA...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGCTCAGGTTGGCAGCTaGCTGCTGGAGGTCCATGCG +
Preference number: 4 (lower is better)
Translates to: CRISQGPSWFLQSGLFPCAQVGS*LLEVHA
Trigger: CGCATGGACCTCCAGCAGCCAGCTGCCAACCTGAGC...ACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCAGACCCCTCCACCACTaGCCGTGTCATCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCRPLHH*PCHLQN
Trigger: ATTCTGCAGATGACACGGCCAGTGGTGGAGGGGTCT...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTATAGGAATTTGGGGAAGTaGGTGAGGATGAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LGNRHGDQAQDAQPAWLYRNLGK*VRMRVL
Trigger: GAGGACCCTCATCCTCACTCACTTCCCCAAATTCCT...ATAGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCGAAGGTGGCATGGTaGAGCCTGACTCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFPKVAW*SLTPRW
Trigger: CCATCTGGGAGTCAGGCTTCACCATGCCACCTTCGG...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCCTCCTTCATAGTCCTTaGTGTAGCCCAGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCLLHSP*CSPDSG
Trigger: GCCGCTATCTGGGCTACATCAAGGACTATGAAGGAG...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp ATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCACAACTCGCTCAGGTTaGCAGCTGGCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: IRTNSSCPGHQTFYNGLATTRSG*QLAAGG
Trigger: ACCTCCAGCAGCCAGCTGCCAACCTGAGCGAGTTGT...GGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp AGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGAAGGCTACCATCTCGAGCTGCGTTaGCCGAAAGCAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SQGPSWFLQSGLFPCEGYHLELR*PKAGLS
Trigger: AGACAAGCCTGCTTTCGGCCAACGCAGCTCGAGATG...GTAGCCTTCACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCTGGCATTCTTGGCAGCTaGTGGGAAAAGACATTCTGC +
Preference number: 4 (lower is better)
Translates to: SCPGHQTFYNGLAPDQTSGILGS*WEKTFC
Trigger: GCAGAATGTCTTTTCCCACCAGCTGCCAAGAATGCC...AGACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCTTTCCTTGGGCATTCTTaGCAGCTGGTGGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SCPGHQTFYNGLAPDQTSFLGHS*QLVGKD
Trigger: GTCTTTTCCCACCAGCTGCCAAGAATGCCCAAGGAA...AGACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTGAGCAGGAACATCTTTaGGAGCTCAAACATTGTCTG +
Preference number: 4 (lower is better)
Translates to: PWETGMGTRLRMLSLHGSEQEHL*ELKHCL
Trigger: CAGACAATGTTTGAGCTCTCAAAGATGTTCCTGCTC...AGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp AGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTGAGGAATTTGGGGAAGTaGGTGAGGATGAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RPDVSPRWDARKVERELLRNLGK*VRMRVL
Trigger: GAGGACCCTCATCCTCACTCACTTCCCCAAATTCCT...CAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CTGCATGGCTCTATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACCCAGGCACTGGGGTGTaGCTTGATCTGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LHGSIRTNSSCPGHQTFYPGTGV*LDLSQQ
Trigger: CTGCTGGCTCAGATCAAGTCACACCCCAGTGCCTGG...GTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTATAGAGCCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTATGTAGTCAGGAGCCTCTaGCTTCTTCACAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LGNRHGDQAQDAQPAWLYVVRSL*LLHRFH
Trigger: ATGGAACCTGTGAAGAAGTCAGAGGCTCCTGACTAC...ATAGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGTGGGAAAAGACATTCTaGAGCCCCACGAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QKVCKIWGPWLEFLQLSPWEKTF*SPTSQS
Trigger: GCTCTGGCTCGTGGGGCTGCAGAATGTCTTTTCCCA...CGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGCTCTCCACCGGGATCTaGCTCACTCCCTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QKVCKIWGPWLEFLQLSPLSTGI*LTPSLK
Trigger: CTTCAAAGAGGGAGTGAGGCAGATCCCGGTGGAGAG...CGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTACAACTCGCTCAGGTTaGCAGCTGGCTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: CRISQGPSWFLQSGLFPCTTRSG*QLAAGG
Trigger: ACCTCCAGCAGCCAGCTGCCAACCTGAGCGAGTTGT...ACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp AGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGAAGGCTACAGCCTGACTCCCAGATaGGAGAATTTGCCCCGTAGA +
Preference number: 4 (lower is better)
Translates to: SQGPSWFLQSGLFPCEGYSLTPR*ENLPRR
Trigger: TCTACGGGGCAAATTCTCCCATCTGGGAGTCAGGCT...GTAGCCTTCACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp AGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTGAGCCTGACTCCCAGATaGGAGAATTTGCCCCGTAGA +
Preference number: 4 (lower is better)
Translates to: RPDVSPRWDARKVERELLSLTPR*ENLPRR
Trigger: TCTACGGGGCAAATTCTCCCATCTGGGAGTCAGGCT...CAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp GAGAGCTGCTGGCTTGGGAGTGAGTGCCTGCTGGCCAGAAAGTCTGTAAGATCTCATCTCGAGCTGCGTTaGCCGAAAGCAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ESCWLGSECLLARKSVRSHLELR*PKAGLS
Trigger: AGACAAGCCTGCTTTCGGCCAACGCAGCTCGAGATG...AGATCTTACAGACTTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGAGTTGCCAATGACGTaGAACTCGATGATTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSELPMT*NSMIPR
Trigger: GCGAGGAATCATCGAGTTCCACGTCATTGGCAACTC...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGGCATTCTTGGCAGCTaGTGGGAAAAGACATTCTGC +
Preference number: 4 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSGILGS*WEKTFC
Trigger: GCAGAATGTCTTTTCCCACCAGCTGCCAAGAATGCC...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCATTCCTTGGGCATTCTTaGCAGCTGGTGGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSFLGHS*QLVGKD
Trigger: GTCTTTTCCCACCAGCTGCCAAGAATGCCCAAGGAA...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp TCACTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTGGTACTCCTTTAGGTaGTTCATCAGGTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLNSPGPGKQAWGPGSGCWYSFR*FIRWVP
Trigger: TGGCACCCACCTGATGAACCACCTAAAGGAGTACCA...GCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp ATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCTGGCATGGTGAAGCCTaGCTCCCAGATGGGAGAATT +
Preference number: 4 (lower is better)
Translates to: IRTNSSCPGHQTFYNGLAWHGEA*LPDGRI
Trigger: AATTCTCCCATCTGGGAGTCAGGCTTCACCATGCCA...GGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAAGGTTTCATTGGCCTTaGAAGCTGAGAAGACCCCTA +
Preference number: 4 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSRFHWP*KLRRPL
Trigger: TAGGGGTCTTCTCAGCTTGCAAGGCCAATGAAACCT...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTCCAGCCATTACACTTaGAGGTTTCATTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCSSHYT*RFHWPC
Trigger: GCAAGGCCAATGAAACCTGCAAGTGTAATGGCTGGA...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCTCTCCACCGGGATCTaGCTCACTCCCTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFLSTGI*LTPSLK
Trigger: CTTCAAAGAGGGAGTGAGGCAGATCCCGGTGGAGAG...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGACACATTCTCCAGGTaGGACACATGGTCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: QKVCKIWGPWLEFLQLSPDTFSR*DTWSAK
Trigger: TTTGGCGGACCATGTGTCCCACCTGGAGAATGTGTC...CGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp TCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCTAAAGGATGCTGTGTTTaGTGTGGTACTCCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: SCPGHQTFYNGLAPDQTSKGCCV*CGTPLG
Trigger: ACCTAAAGGAGTACCACATCAAACACAGCATCCTTT...AGACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTATACTCGTCAGCATAGGTaGGAAAGTAAAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LGNRHGDQAQDAQPAWLYTRQHR*ESKGCC
Trigger: ACAGCATCCTTTACTTTCTCACCTATGCTGACGAGT...ATAGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CCTGCTGGCCAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGGAGCCAGCAGGTTTTTaGGGGTCGTATATAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PAGQKVCKIWGPWLEFLQEPAGF*GSYIAD
Trigger: ATCAGCTATATACGACCCTCAAAAACCTGCTGGCTC...CTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTGGCCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTGGGTGTGACTTGATCTaGGCCAGCAGGTTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFGCDLI*ASRFLR
Trigger: CCTCAAAAACCTGCTGGCTCAGATCAAGTCACACCC...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CATGGCTCTATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACTTGGCGATGACCCGCTaGAGGTCAGCTACGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HGSIRTNSSCPGHQTFYNLAMTR*RSATKS
Trigger: GCTCTTCGTAGCTGACCTGCAGCGGGTCATCGCCAA...GTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTATAGAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCACTTGCAGGTTTCATTaGCCTTGCAAGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCTCRFH*PCKLRR
Trigger: TCTTCTCAGCTTGCAAGGCCAATGAAACCTGCAAGT...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp AAAAGCTTTATTGTTCCCTCCGAGGGATTAATGCCAAGGAATGAATGGTCCTCCCGCGCCGGTTGGCCTTaGGCGTCAGGGAGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: KSFIVPSEGLMPRNEWSSRAGWP*ASGSCQ
Trigger: TTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCG...GGAGGACCATTCATTCCTTGGCATTAATCCCTCGGAGGGAACAATAAAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp AGACAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTGGTACTCCTTTAGGTaGTTCATCAGGTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RQQCRISQGPSWFLQSGLWYSFR*FIRWVP
Trigger: TGGCACCCACCTGATGAACCACCTAAAGGAGTACCA...CAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTGTAGTCAGGAGCCTCTaGCTTCTTCACAGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFVVRSL*LLHRFH
Trigger: ATGGAACCTGTGAAGAAGTCAGAGGCTCCTGACTAC...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp TGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGACCTTGCGGATCTGTaGCTGTTTGCGCTCAATCAA +
Preference number: 4 (lower is better)
Translates to: CRISQGPSWFLQSGLFPCDLADL*LFALNQ
Trigger: TTGATTGAGCGCAAACAGGCACAGATCCGCAAGGTC...ACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp GAGAGCTGCTGGCTTGGGAGTGAGTGCCTGCTGGCCAGAAAGTCTGTAAGATCTACTCGTCAGCATAGGTaGGAAAGTAAAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: ESCWLGSECLLARKSVRSTRQHR*ESKGCC
Trigger: ACAGCATCCTTTACTTTCTCACCTATGCTGACGAGT...AGATCTTACAGACTTTCTGGCCAGCAGGCACTCACTCCCAAGCCAGCAGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CCA 90 bp AAAAGCTTTATTGTTCCCTCCGAGGGATTAATGCCAAGGAATGAATGGTCCTCCTCTCCCCTGCTGGCATaGGCTCAGTCCCTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: KSFIVPSEGLMPRNEWSSSPLLA*AQSLRN
Trigger: ATTCCGCAGGGACTGAGCCCATGCCAGCAGGGGAGA...GGAGGACCATTCATTCCTTGGCATTAATCCCTCGGAGGGAACAATAAAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CTGCATGGCTCTATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACTCCAGCCATTACACTTaGAGGTTTCATTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LHGSIRTNSSCPGHQTFYSSHYT*RFHWPC
Trigger: GCAAGGCCAATGAAACCTGCAAGTGTAATGGCTGGA...GTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTATAGAGCCATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp CATGGCTCTATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACCCAGATGGGAGAATTTaGCCCGTAGATCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HGSIRTNSSCPGHQTFYNPDGRI*PVDLFL
Trigger: GAGGAAGAGATCTACGGGGCAAATTCTCCCATCTGG...GTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTATAGAGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR TCA 90 bp AAAAGCTTTATTGTTCCCTCCGAGGGATTAATGCCAAGGAATGAATGGTCCTCCGAGCCAGCAGGTTTTTaGGGGTCGTATATAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KSFIVPSEGLMPRNEWSSEPAGF*GSYIAD
Trigger: ATCAGCTATATACGACCCTCAAAAACCTGCTGGCTC...GGAGGACCATTCATTCCTTGGCATTAATCCCTCGGAGGGAACAATAAAGCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR GCA 90 bp AAAAGCTTTATTGTTCCCTCCGAGGGATTAATGCCAAGGAATGAATGGTCCTCCTGGCTAAATTTGTACTaGACAAAGTTCAGTACACCC +
Preference number: 4 (lower is better)
Translates to: KSFIVPSEGLMPRNEWSSWLNLY*TKFSTP
Trigger: GGGTGTACTGAACTTTGTGCAGTACAAATTTAGCCA...GGAGGACCATTCATTCCTTGGCATTAATCCCTCGGAGGGAACAATAAAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 90 bp TCAAGCTTCTTGGCACGCGGCAGACCCCGGACTTGCGCCTTCCTCTaGCTAGCGCGCTGCTGCTGGCTCAGGCCAGGTCGAGCCGGATCC +
Preference number: 5 (lower is better)
Translates to: SSFLARGRPRTCAFL*LARCCWLRPGRAGS
Trigger: GGATCCGGCTCGACCTGGCCTGAGCCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCGCGTGCCAAGAAGCTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp GGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCTCATCTCGAGCTGCGTaGGCCGAAAGCAGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: GPWLEFLQLSPGEGAGSPSSRAA*AESRLV
Trigger: GACAAGCCTGCTTTCGGCCAACGCAGCTCGAGATGA...GGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCTCATCTCGAGCTGCGTaGGCCGAAAGCAGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: WGPWLEFLQLSPGEGAGSSSRAA*AESRLV
Trigger: GACAAGCCTGCTTTCGGCCAACGCAGCTCGAGATGA...GCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGTTGGGCGTCAGGGAGTaGCCAATGACGTGGAACTCG +
Preference number: 5 (lower is better)
Translates to: LGSLAGVSPAESGRGGRELGVRE*PMTWNS
Trigger: CGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAA...CTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTACGCGCCGGTTGGCCTaGGGCGTCAGGGAGTTGCCA +
Preference number: 5 (lower is better)
Translates to: PWETGMGTRLRMLSLHGSTRRLA*GVRELP
Trigger: TGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGT...AGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCGGCTCTTGGGCACCTaGATGTCTTTGGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LGSLAGVSPAESGRGGRERLLGT*MSLEKP
Trigger: GGGCTTCTCCAAAGACATCAAGGTGCCCAAGAGCCG...CTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS GCA 90 bp ACCCCTAGTTTCTCAAGCTTCTTGGCACGCGGCAGACCCCGGACTTaGGCCTTCCTCTGGCTAGCGCGCTGCTGCTGGCTCAGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: TPSFSSFLARGRPRT*AFLWLARCCWLRPG
Trigger: ACCTGGCCTGAGCCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAAACTAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAGCCTGCATGGCTCTATCTGCCGGGACCGGGTTaGGGGCCTGGGAAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: LGNRHGDQAQDAQPAWLYLPGPG*GPGKVP
Trigger: CGGAACCTTCCCAGGCCCCAAACCCGGTCCCGGCAG...ATAGAGCCATGCAGGCTGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCTCGGCAGACCCCGGACTaGCGCCTTCCTCTGGCTAGC +
Preference number: 5 (lower is better)
Translates to: SCPGHQTFYNGLAPDQTSRQTPD*RLPLAS
Trigger: GCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCG...AGACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCCACAGGTTTCATTGGCCTaGCAAGCTGAGAAGACCCCT +
Preference number: 5 (lower is better)
Translates to: SLAGVSPAESGRGGREPPQVSLA*QAEKTP
Trigger: AGGGGTCTTCTCAGCTTGCAAGGCCAATGAAACCTG...TGGGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCCAGGATCCTTAAGCTCCTaGCCCTTCTCCTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SLAGVSPAESGRGGREPPGSLSS*PFSFPS
Trigger: ACTGGGAAAGGAGAAGGGCAAGGAGCTTAAGGATCC...TGGGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS GCA 90 bp GATGATTCCTCGCCGTTCTTCCAGGCGAGCCGTCTCATCTCGAGCTaGGTTGGCCGAAAGCAGGCTTGTCTCAGGCCCCAGCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: DDSSPFFQASRLISS*VGRKQACLRPQHGS
Trigger: GCTGCCATGCTGGGGCCTGAGACAAGCCTGCTTTCGGCCAACGCAGCTCGAGATGAGACGGCTCGCCTGGAAGAACGGCGAGGAATCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 90 bp AGCACGCGCCGGTTGGCCTTGGGCGTCAGGGAGTTGCCAATGACGTaGAACTCGATGATTCCTCGCCGTTCTTCCAGGCGAGCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: STRRLALGVRELPMT*NSMIPRRSSRRAVS
Trigger: TGAGACGGCTCGCCTGGAAGAACGGCGAGGAATCATCGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp ATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCTGCCGGGACCGGGTTaGGGGCCTGGGAAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: IRTNSSCPGHQTFYNGLALPGPG*GPGKVP
Trigger: CGGAACCTTCCCAGGCCCCAAACCCGGTCCCGGCAG...GGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCCCCACACTTGCAGGTTTCATaGGCCTTGCAAGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: SLAGVSPAESGRGGREPPHLQVS*ALQAEK
Trigger: CTTCTCAGCTTGCAAGGCCAATGAAACCTGCAAGTG...TGGGGGCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCATCACGCGGAGCCGCTaGGCATCCTCCAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCITRSR*ASSRVR
Trigger: CCTGACCCTGGAGGATGCCAAGCGGCTCCGCGTGAT...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCTCAATCACGCGGAGCCGCTaGGCATCCTCCAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LNSPGPGKQAWGPGSGCSITRSR*ASSRVR
Trigger: CCTGACCCTGGAGGATGCCAAGCGGCTCCGCGTGAT...TGAGCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGCCGGATCTGTGCCTGTTaGCGCTCAATCAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: WGPWLEFLQLSPGEGAGSRICAC*RSINFL
Trigger: CAAGAAGTTGATTGAGCGCAAACAGGCACAGATCCG...GCTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCTTTGTACTCCCGGCAGTaGGCGATGACCCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SCPGHQTFYNGLAPDQTSLYSRQ*AMTRCR
Trigger: CCTGCAGCGGGTCATCGCCAACTGCCGGGAGTACAA...AGACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 90 bp CATGGAAGGACTGAAGCTGGGTACAACTGTTGCACTGACCGTGGCTaGCCGGGGCACCAGCTGTGTCCCCTCCGAAGGTGGCATGGTGAA +
Preference number: 5 (lower is better)
Translates to: HGRTEAGYNCCTDRG*PGHQLCPLRRWHGE
Trigger: TTCACCATGCCACCTTCGGAGGGGACACAGCTGGTGCCCCGGCCAGCCACGGTCAGTGCAACAGTTGTACCCAGCTTCAGTCCTTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp AGACAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGCGGCAGACCCCGGACTaGCGCCTTCCTCTGGCTAGC +
Preference number: 5 (lower is better)
Translates to: RQQCRISQGPSWFLQSGLRQTPD*RLPLAS
Trigger: GCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCG...CAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGAGAGGGGGCCGGGAGTTCTCAGGCACCAGTTaGTCCTTTTCCACCCGAAAT +
Preference number: 5 (lower is better)
Translates to: LGSLAGVSPAESGRGGREFSGTS*SFSTRN
Trigger: ATTTCGGGTGGAAAAGGACAAACTGGTGCCTGAGAA...CTCCCGGCCCCCTCTCCCGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp GGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGCGGCTCTTGGGCACCTaGATGTCTTTGGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GPTVHALATRHSTTGWPQRLLGT*MSLEKP
Trigger: GGGCTTCTCCAAAGACATCAAGGTGCCCAAGAGCCG...CTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CCTGCTGGCCAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGTTGTACTCCCGGCAGTaGGCGATGACCCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PAGQKVCKIWGPWLEFLQLYSRQ*AMTRCR
Trigger: CCTGCAGCGGGTCATCGCCAACTGCCGGGAGTACAA...CTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTGGCCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 90 bp AAGACGAGGCGGGCGATATATTCCTTGGGCATTCTTGGCAGCTGGTaGGAAAAGACATTCTGCAGCCCCACGAGCCAGAGCAGCACGCGC +
Preference number: 5 (lower is better)
Translates to: KTRRAIYSLGILGSW*EKTFCSPTSQSSTR
Trigger: GCGCGTGCTGCTCTGGCTCGTGGGGCTGCAGAATGTCTTTTCCCACCAGCTGCCAAGAATGCCCAAGGAATATATCGCCCGCCTCGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCGTCAGCATGACCTCATaGACCAGCTCCATGGGGATG +
Preference number: 5 (lower is better)
Translates to: FMPWPPDILQRAGPRPDVVSMTS*TSSMGM
Trigger: CATCCCCATGGAGCTGGTCAATGAGGTCATGCTGAC...GACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCCAGACCAGACGTCCGGGCGATATATTCCTaGGGCATTCTTGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FMPWPPDILQRAGPRPDVRAIYS*GILGSW
Trigger: CCAGCTGCCAAGAATGCCCAAGGAATATATCGCCCG...GACGTCTGGTCTGGGGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS TCA 90 bp GACAGTATTCGCTGTCTGGGGGATTGTACTCCCGGCAGTTGGCGATaGCCCGCTGCAGGTCAGCTACGAAGAGCTTCCGGGTCACATAGT +
Preference number: 5 (lower is better)
Translates to: DSIRCLGDCTPGSWR*PAAGQLRRASGSHS
Trigger: ACTATGTGACCCGGAAGCTCTTCGTAGCTGACCTGCAGCGGGTCATCGCCAACTGCCGGGAGTACAATCCCCCAGACAGCGAATACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TCACTGAATAGTCCTGGCCCTGGGAAACAGGCATGGGGACCAGGCTCAGGATGCCGGGCGATATATTCCTaGGGCATTCTTGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SLNSPGPGKQAWGPGSGCRAIYS*GILGSW
Trigger: CCAGCTGCCAAGAATGCCCAAGGAATATATCGCCCG...GCATCCTGAGCCTGGTCCCCATGCCTGTTTCCCAGGGCCAGGACTATTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTAGTTTCTCAAGCTTCTaGGCACGCGGCAGACCCCGG +
Preference number: 5 (lower is better)
Translates to: CRISQGPSWFLQSGLFPCSFSSF*ARGRPR
Trigger: CCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAAACT...ACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp AGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTGGTCAGCATGACCTCATaGACCAGCTCCATGGGGATG +
Preference number: 5 (lower is better)
Translates to: RPDVSPRWDARKVERELLVSMTS*TSSMGM
Trigger: CATCCCCATGGAGCTGGTCAATGAGGTCATGCTGAC...CAGCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp AGACAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTGCCTCACTCCCTCTTaGAAGCAGCTGAGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: RQQCRISQGPSWFLQSGLCLTPS*KQLSPG
Trigger: CCCTGGACTCAGCTGCTTCAAAGAGGGAGTGAGGCA...CAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS GCA 90 bp GCTGCAGGTCAGCTACGAAGAGCTTCCGGGTCACATAGTAGCGACTaGGCAACCGTTCTGTCATGGTCTTCAGGTCAATGGGGAAACGGA +
Preference number: 5 (lower is better)
Translates to: AAGQLRRASGSHSSD*ATVLSWSSGQWGNG
Trigger: TCCGTTTCCCCATTGACCTGAAGACCATGACAGAACGGTTGCGCAGTCGCTACTATGTGACCCGGAAGCTCTTCGTAGCTGACCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTTTGGGCGTCAGGGAGTaGCCAATGACGTGGAACTCG +
Preference number: 5 (lower is better)
Translates to: CRISQGPSWFLQSGLFPCLGVRE*PMTWNS
Trigger: CGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAA...ACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp TGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTTGCCTCACTCCCTCTTaGAAGCAGCTGAGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: CRISQGPSWFLQSGLFPCCLTPS*KQLSPG
Trigger: CCCTGGACTCAGCTGCTTCAAAGAGGGAGTGAGGCA...ACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CCAGACCAGACGTCTCCCCAAGGTGGGATGCAAGGAAGGTGGAAAGAGAGCTGCTTCTCAGGCACCAGTTaGTCCTTTTCCACCCGAAAT +
Preference number: 5 (lower is better)
Translates to: PDQTSPQGGMQGRWKESCFSGTS*SFSTRN
Trigger: ATTTCGGGTGGAAAAGGACAAACTGGTGCCTGAGAA...GCAGCTCTCTTTCCACCTTCCTTGCATCCCACCTTGGGGAGACGTCTGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp AAAAGCTTTATTGTTCCCTCCGAGGGATTAATGCCAAGGAATGAATGGTCCTCCACGCGCCGGTTGGCCTaGGGCGTCAGGGAGTTGCCA +
Preference number: 5 (lower is better)
Translates to: KSFIVPSEGLMPRNEWSSTRRLA*GVRELP
Trigger: TGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGT...GGAGGACCATTCATTCCTTGGCATTAATCCCTCGGAGGGAACAATAAAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGGATCCTTAAGCTCCTaGCCCTTCTCCTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: QKVCKIWGPWLEFLQLSPGSLSS*PFSFPS
Trigger: ACTGGGAAAGGAGAAGGGCAAGGAGCTTAAGGATCC...CGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCAGGTTTCATTGGCCTaGCAAGCTGAGAAGACCCCT +
Preference number: 5 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFQVSLA*QAEKTP
Trigger: AGGGGTCTTCTCAGCTTGCAAGGCCAATGAAACCTG...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp ATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCACTTGCAGGTTTCATaGGCCTTGCAAGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: IRTNSSCPGHQTFYNGLAHLQVS*ALQAEK
Trigger: CTTCTCAGCTTGCAAGGCCAATGAAACCTGCAAGTG...GGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp ATAAGGACCAACAGTTCATGCCCTGGCCACCAGACATTCTACAACGGGCTGGCCCGGATCTGTGCCTGTTaGCGCTCAATCAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: IRTNSSCPGHQTFYNGLARICAC*RSINFL
Trigger: CAAGAAGTTGATTGAGCGCAAACAGGCACAGATCCG...GGCCAGCCCGTTGTAGAATGTCTGGTGGCCAGGGCATGAACTGTTGGTCCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp AGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCCATGTGAAGGCTACGAGGTAGAAATAGACTaGTTTGGTGTCTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SQGPSWFLQSGLFPCEGYEVEID*FGVCVL
Trigger: GAGGACACAGACACCAAACAAGTCTATTTCTACCTC...GTAGCCTTCACATGGAAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CAGAAAGTCTGTAAGATCTGGGGTCCCTGGCTGGAGTTTCTCCAGCTGAGTCCGGAGGTAGAAATAGACTaGTTTGGTGTCTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: QKVCKIWGPWLEFLQLSPEVEID*FGVCVL
Trigger: GAGGACACAGACACCAAACAAGTCTATTTCTACCTC...CGGACTCAGCTGGAGAAACTCCAGCCAGGGACCCCAGATCTTACAGACTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp AGACAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGCGCTCAATCAACTTCTaGATGATCTCTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RQQCRISQGPSWFLQSGLRSINF*MISFCF
Trigger: GAAACAGAAAGAGATCATCAAGAAGTTGATTGAGCG...CAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS-3UTR CAA 90 bp CAACAGTGTAGGATAAGCCAAGGCCCCTCATGGTTCCTCCAGTCTGGGCTGTTTCGCTCAATCAACTTCTaGATGATCTCTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: QQCRISQGPSWFLQSGLFRSINF*MISFCF
Trigger: GAAACAGAAAGAGATCATCAAGAAGTTGATTGAGCG...AAACAGCCCAGACTGGAGGAACCATGAGGGGCCTTGGCTTATCCTACACTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 72 bp CCGGAGTCGGAGCCGGAGTGGAGGCTGAAGCCGGACTaGGCGCAGGAGTCGAAGTTGGGGCAGGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: PESEPEWRLKPD*AQESKLGQGLG
Trigger: CCCCAGCCCCTGCCCCAACTTCGACTCCTGCGCCCAGTCCGGCTTCAGCCTCCACTCCGGCTCCGACTCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS GCA 72 bp AGACCCCGGACTTGCGCCTTCCTCTGGCTAGCGCGCTaGTGCTGGCTCAGGCCAGGTCGAGCCGGATCCCCC +
Preference number: 6 (lower is better)
Translates to: RPRTCAFLWLAR*CWLRPGRAGSP
Trigger: GGGGGATCCGGCTCGACCTGGCCTGAGCCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 72 bp TTGGCACGCGGCAGACCCCGGACTTGCGCCTTCCTCTaGCTAGCGCGCTGCTGCTGGCTCAGGCCAGGTCGA +
Preference number: 6 (lower is better)
Translates to: LARGRPRTCAFL*LARCCWLRPGR
Trigger: TCGACCTGGCCTGAGCCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCGCGTGCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp AGCCCCACGAGCCAGAGCAGCACGCGCCGGTTGGCCTaGGGCGTCAGGGAGTTGCCAATGACGTGGAACTCG +
Preference number: 6 (lower is better)
Translates to: SPTSQSSTRRLA*GVRELPMTWNS
Trigger: CGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCTGCTCTGGCTCGTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS GCA 72 bp TTCTCAAGCTTCTTGGCACGCGGCAGACCCCGGACTTaGGCCTTCCTCTGGCTAGCGCGCTGCTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: FSSFLARGRPRT*AFLWLARCCWL
Trigger: GAGCCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 72 bp AAGGGTGCTCACAGCTACGGCACAACTCGCTCAGGTTaGCAGCTGGCTGCTGGAGGTCCATGCGGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: KGAHSYGTTRSG*QLAAGGPCGVR
Trigger: CCGCACCCCGCATGGACCTCCAGCAGCCAGCTGCCAACCTGAGCGAGTTGTGCCGTAGCTGTGAGCACCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS TCA 72 bp CGCTGTCTGGGGGATTGTACTCCCGGCAGTTGGCGATaGCCCGCTGCAGGTCAGCTACGAAGAGCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: RCLGDCTPGSWR*PAAGQLRRASG
Trigger: CCCGGAAGCTCTTCGTAGCTGACCTGCAGCGGGTCATCGCCAACTGCCGGGAGTACAATCCCCCAGACAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS GCA 72 bp TCGCCGTTCTTCCAGGCGAGCCGTCTCATCTCGAGCTaGGTTGGCCGAAAGCAGGCTTGTCTCAGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: SPFFQASRLISS*VGRKQACLRPQ
Trigger: CTGGGGCCTGAGACAAGCCTGCTTTCGGCCAACGCAGCTCGAGATGAGACGGCTCGCCTGGAAGAACGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 72 bp GCTCCATGGGGATGTCCCCCATCACGCGGAGCCGCTTaGCATCCTCCAGGGTCAGGTTCTCAGGAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: APWGCPPSRGAA*HPPGSGSQEAS
Trigger: GGAAGCTTCCTGAGAACCTGACCCTGGAGGATGCCAAGCGGCTCCGCGTGATGGGGGACATCCCCATGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp TTTCTCAAGCTTCTTGGCACGCGGCAGACCCCGGACTaGCGCCTTCCTCTGGCTAGCGCGCTGCTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: FLKLLGTRQTPD*RLPLASALLLA
Trigger: AGCCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp GCACTGGCGCAGCGACAGTATTCGCTGTCTGGGGGATaGTACTCCCGGCAGTTGGCGATGACCCGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ALAQRQYSLSGG*YSRQLAMTRCR
Trigger: CCTGCAGCGGGTCATCGCCAACTGCCGGGAGTACAATCCCCCAGACAGCGAATACTGTCGCTGCGCCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 90 bp ACGAGCCAGAGCAGCACGCGCCGGTTGGCCTTGGGCGTCAGGGAGTaGCCAATGACGTGGAACTCGATGATTCCTCGCCGTTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: TSQSSTRRLALGVRE*PMTWNSMIPRRSSR
Trigger: CCTGGAAGAACGGCGAGGAATCATCGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCTGCTCTGGCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 90 bp GCGCAGCGACAGTATTCGCTGTCTGGGGGATTGTACTCCCGGCAGTaGGCGATGACCCGCTGCAGGTCAGCTACGAAGAGCTTCCGGGTC +
Preference number: 6 (lower is better)
Translates to: AQRQYSLSGGLYSRQ*AMTRCRSATKSFRV
Trigger: GACCCGGAAGCTCTTCGTAGCTGACCTGCAGCGGGTCATCGCCAACTGCCGGGAGTACAATCCCCCAGACAGCGAATACTGTCGCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 72 bp AAATGGACCGTAGAAGGCTTCGGCCAAACACGTGGGTaGTCTCGTAGCGGGGGAGGCTGTCGCAGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: KWTVEGFGQTRG*SRSGGGCRSSG
Trigger: CCCAGAGCTGCGACAGCCTCCCCCGCTACGAGACCACCCACGTGTTTGGCCGAAGCCTTCTACGGTCCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 72 bp GTTCTTCCAGGCGAGCCGTCTCATCTCGAGCTGCGTTaGCCGAAAGCAGGCTTGTCTCAGGCCCCAGCATGG +
Preference number: 6 (lower is better)
Translates to: VLPGEPSHLELR*PKAGLSQAPAW
Trigger: CCATGCTGGGGCCTGAGACAAGCCTGCTTTCGGCCAACGCAGCTCGAGATGAGACGGCTCGCCTGGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp AGCTCCATGGGGATGTCCCCCATCACGCGGAGCCGCTaGGCATCCTCCAGGGTCAGGTTCTCAGGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: SSMGMSPITRSR*ASSRVRFSGSF
Trigger: GAAGCTTCCTGAGAACCTGACCCTGGAGGATGCCAAGCGGCTCCGCGTGATGGGGGACATCCCCATGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp AGCAGCACGCGCCGGTTGGCCTTGGGCGTCAGGGAGTaGCCAATGACGTGGAACTCGATGATTCCTCGCCGT +
Preference number: 6 (lower is better)
Translates to: SSTRRLALGVRE*PMTWNSMIPRR
Trigger: ACGGCGAGGAATCATCGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 90 bp ACATTCTGCAGCCCCACGAGCCAGAGCAGCACGCGCCGGTTGGCCTaGGGCGTCAGGGAGTTGCCAATGACGTGGAACTCGATGATTCCT +
Preference number: 6 (lower is better)
Translates to: TFCSPTSQSSTRRLA*GVRELPMTWNSMIP
Trigger: AGGAATCATCGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCTGCTCTGGCTCGTGGGGCTGCAGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 90 bp GAAAAGACATTCTGCAGCCCCACGAGCCAGAGCAGCACGCGCCGGTaGGCCTTGGGCGTCAGGGAGTTGCCAATGACGTGGAACTCGATG +
Preference number: 6 (lower is better)
Translates to: EKTFCSPTSQSSTRR*ALGVRELPMTWNSM
Trigger: CATCGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCTGCTCTGGCTCGTGGGGCTGCAGAATGTCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS GCA 72 bp GTCTCTCGAATGCCAGGGACGCTCTCCACCGGGATCTaGCTCACTCCCTCTTTGAAGCAGCTGAGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: VSRMPGTLSTGI*LTPSLKQLSPG
Trigger: CCCTGGACTCAGCTGCTTCAAAGAGGGAGTGAGGCAGATCCCGGTGGAGAGCGTCCCTGGCATTCGAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 90 bp TCATTGACCAGCTCCATGGGGATGTCCCCCATCACGCGGAGCCGCTaGGCATCCTCCAGGGTCAGGTTCTCAGGAAGCTTCCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SLTSSMGMSPITRSR*ASSRVRFSGSFLFS
Trigger: GGAGAAGAGGAAGCTTCCTGAGAACCTGACCCTGGAGGATGCCAAGCGGCTCCGCGTGATGGGGGACATCCCCATGGAGCTGGTCAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 72 bp CGGTTGGCCTTGGGCGTCAGGGAGTTGCCAATGACGTaGAACTCGATGATTCCTCGCCGTTCTTCCAGGCGA +
Preference number: 6 (lower is better)
Translates to: RLALGVRELPMT*NSMIPRRSSRR
Trigger: TCGCCTGGAAGAACGGCGAGGAATCATCGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAAGGCCAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp CCGATGACCCGCCCATCCTTGATCAGGGCCAGGGTCTaGTGCTTCGGGTCAAAGACGAGGCGGGCGATATAT +
Preference number: 6 (lower is better)
Translates to: PMTRPSLIRARV*CFGSKTRRAIY
Trigger: ATATATCGCCCGCCTCGTCTTTGACCCGAAGCACAAGACCCTGGCCCTGATCAAGGATGGGCGGGTCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp CAGTATTCGCTGTCTGGGGGATTGTACTCCCGGCAGTaGGCGATGACCCGCTGCAGGTCAGCTACGAAGAGC +
Preference number: 6 (lower is better)
Translates to: QYSLSGGLYSRQ*AMTRCRSATKS
Trigger: GCTCTTCGTAGCTGACCTGCAGCGGGTCATCGCCAACTGCCGGGAGTACAATCCCCCAGACAGCGAATACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 90 bp TCATTGGCCTTGCAAGCTGAGAAGACCCCTAGTTTCTCAAGCTTCTaGGCACGCGGCAGACCCCGGACTTGCGCCTTCCTCTGGCTAGCG +
Preference number: 6 (lower is better)
Translates to: SLALQAEKTPSFSSF*ARGRPRTCAFLWLA
Trigger: CGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAAACTAGGGGTCTTCTCAGCTTGCAAGGCCAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CCA 72 bp TGCAAGCTGAGAAGACCCCTAGTTTCTCAAGCTTCTTaGCACGCGGCAGACCCCGGACTTGCGCCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: CKLRRPLVSQAS*HAADPGLAPSS
Trigger: AGAGGAAGGCGCAAGTCCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAAACTAGGGGTCTTCTCAGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp TTGCAAGCTGAGAAGACCCCTAGTTTCTCAAGCTTCTaGGCACGCGGCAGACCCCGGACTTGCGCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LQAEKTPSFSSF*ARGRPRTCAFL
Trigger: GAGGAAGGCGCAAGTCCGGGGTCTGCCGCGTGCCAAGAAGCTTGAGAAACTAGGGGTCTTCTCAGCTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS CAA 72 bp GGTAGCGACATCCTCAGACTGGGACCGCTGCCGGAATaGAGCAGGGGTCTCCAGCTTCCAGTAGTTAAGGCA +
Preference number: 6 (lower is better)
Translates to: GSDILRLGPLPE*SRGLQLPVVKA
Trigger: TGCCTTAACTACTGGAAGCTGGAGACCCCTGCTCAATTCCGGCAGCGGTCCCAGTCTGAGGATGTCGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4
CDS GCA 72 bp CAGCTACGAAGAGCTTCCGGGTCACATAGTAGCGACTaGGCAACCGTTCTGTCATGGTCTTCAGGTCAATGG +
Preference number: 6 (lower is better)
Translates to: QLRRASGSHSSD*ATVLSWSSGQW
Trigger: CCATTGACCTGAAGACCATGACAGAACGGTTGCGCAGTCGCTACTATGTGACCCGGAAGCTCTTCGTAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006973.12
ENSMUST00000103118.4