Pregenerated sensors for KARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031948Ensembl transcript IDs: ENSMUST00000034426.14, ENSMUST00000093120.13, ENSMUST00000164470.3, ENSMUST00000211990.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATAAAAAGAACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTaGAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: NKKNFFSSSLLWRLD*SGQMDGATQESLPQ Trigger: CTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCTTTTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| 3UTR-3UTR TCA 90 bp | AACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACTCAGACCAGATCTGCTaGGATGCAGACACCATAGTT | + |
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Preference number: 2 (lower is better) Translates to: NFFSSSLLWRLDCSGQMDSDQIC*DADTIV Trigger: AACTATGGTGTCTGCATCTCAGCAGATCTGGTCTGA...GTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| 3UTR CCA 72 bp | CTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATaGACGGCGCCACACAGGAATCGCTCCCTCAGACCA | + |
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Preference number: 3 (lower is better) Translates to: LLSCGGWTAVAR*TAPHRNRSLRP Trigger: TGGTCTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| 3UTR GCA 72 bp | AACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTaGAGTGGCCAGATGGACGGCGCCACACAGGAATCG | + |
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Preference number: 3 (lower is better) Translates to: NFFSSSLLWRLD*SGQMDGATQES Trigger: CGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| 3UTR CCA 72 bp | AAAAGAACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTaGACTGCAGTGGCCAGATGGACGGCGCCACACAGG | + |
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Preference number: 3 (lower is better) Translates to: KRTSLVLLSCGG*TAVARWTAPHR Trigger: CCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | GTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCACGGATCCTCCCCAGTaGCCTTCAGCTGCTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: VEVGLQWPDGRRHTGIAPTDPPQ*PSAAGR Trigger: CCGTCCAGCAGCTGAAGGTCACTGGGGAGGATCCGT...GGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | TGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCTGCCCCAGCCCGCTGTaGGAGGCAGCCCGTATTCCA | + |
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Preference number: 4 (lower is better) Translates to: CGGWTAVARWTAPHRNRSCPSPL*EAARIP Trigger: TGGAATACGGGCTGCCTCCCACAGCGGGCTGGGGCA...GGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | TGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCACGGATCCTCCCCAGTaGCCTTCAGCTGCTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: CGGWTAVARWTAPHRNRSTDPPQ*PSAAGR Trigger: CCGTCCAGCAGCTGAAGGTCACTGGGGAGGATCCGT...GGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | GTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTGCTCCTCAAACAGCTaGCTCTGCCGCACGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VEVGLQWPDGRRHTGIAPCSSNS*LCRTGS Trigger: TGACCCCGTGCGGCAGAGGCAGCTGTTTGAGGAGCA...GGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | GTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCCATCACCGGCAGCCTTaGCCTTGGCCTGCTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: VEVGLQWPDGRRHTGIAPHHRQP*PWPAPQ Trigger: TTGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATG...GGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | TCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCACCCCATTCTGCCCATaGGGTTTGGCGCAGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SLVEVGLQWPDGRRHTGITPFCP*GLAQGP Trigger: GGGGCCCTGCGCCAAACCTCATGGGCAGAATGGGGT...GATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | AGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGTGCTCCTCAAACAGCTaGCTCTGCCGCACGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RLDCSGQMDGATQESLPQCSSNS*LCRTGS Trigger: TGACCCCGTGCGGCAGAGGCAGCTGTTTGAGGAGCA...CTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | TGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCGCCTTGGCCTTGGCCTaGTCCTCAAACAGCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CGGWTAVARWTAPHRNRSALALA*SSNSCL Trigger: GAGGCAGCTGTTTGAGGAGCAGGCCAAGGCCAAGGC...GGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATGCCGATCAATGCCCATaGCCCAGCCCGCTGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSCGGWTAVARWTAPHRNADQCP*PSPLWE Trigger: CTCCCACAGCGGGCTGGGGCATGGGCATTGATCGGC...ATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | TGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCGGCAGCCTTGGCCTTaGCCTGCTCCTCAAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: CGGWTAVARWTAPHRNRSRQPWP*PAPQTA Trigger: AGCTGTTTGAGGAGCAGGCCAAGGCCAAGGCTGCCG...GGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | GAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCACATCACCGGCAGCCTTaGCCTTGGCCTGCTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: EVGLQWPDGRRHTGIAPSHHRQP*PWPAPQ Trigger: TTGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATG...TGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | TCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCACGGATCCTCCCCAGTaGCCTTCAGCTGCTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: SLVEVGLQWPDGRRHTGITDPPQ*PSAAGR Trigger: CCGTCCAGCAGCTGAAGGTCACTGGGGAGGATCCGT...GATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | AGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGTTCGGAAGGGTGGGGTaGAGTCGACCTCGTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RLDCSGQMDGATQESLPQFGRVG*SRPRRL Trigger: AAGCCTACGAGGTCGACTTCACCCCACCCTTCCGAA...CTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | CTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTGGCGTGGATGCGGCCTaGCACTTTGAGGGTGACATC | + |
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Preference number: 4 (lower is better) Translates to: LVEVGLQWPDGRRHTGIAGVDAA*HFEGDI Trigger: GATGTCACCCTCAAAGTGGCAGGCCGCATCCACGCC...AGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | CTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTGCCTTGGCCTTGGCCTaGTCCTCAAACAGCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LVEVGLQWPDGRRHTGIAALALA*SSNSCL Trigger: GAGGCAGCTGTTTGAGGAGCAGGCCAAGGCCAAGGC...AGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | TTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCATCACCGGCAGCCTTaGCCTTGGCCTGCTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LWRLDCSGQMDGATQESLHHRQP*PWPAPQ Trigger: TTGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATG...GAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | CTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGGGCCTCTGTGCTCTCTaGGGTTTCAGTGGTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLSCGGWTAVARWTAPHRGLCAL*GFSGRC Trigger: GCAGCGACCACTGAAACCCCAGAGAGCACAGAGGCC...CCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | GTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCGTGAAAGGAGCAAGGTaGCCCAGTCGAAGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VEVGLQWPDGRRHTGIAPVKGAR*PSRSSL Trigger: GAGGGAACTTCGACTGGGCCACCTTGCTCCTTTCAC...GGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | CTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTTTCGGAAGGGTGGGGTaGAGTCGACCTCGTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVEVGLQWPDGRRHTGIAFGRVG*SRPRRL Trigger: AAGCCTACGAGGTCGACTTCACCCCACCCTTCCGAA...AGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | TTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACCCCATTCTGCCCATaGGGTTTGGCGCAGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: FSSSLLWRLDCSGQMDGATPFCP*GLAQGP Trigger: GGGGCCCTGCGCCAAACCTCATGGGCAGAATGGGGT...GGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | TCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGGCGTGGATGCGGCCTaGCACTTTGAGGGTGACATC | + |
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Preference number: 4 (lower is better) Translates to: SSLLWRLDCSGQMDGATQGVDAA*HFEGDI Trigger: GATGTCACCCTCAAAGTGGCAGGCCGCATCCACGCC...CTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | TTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCGCCGATCAATGCCCATaGCCCAGCCCGCTGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FSSSLLWRLDCSGQMDGAADQCP*PSPLWE Trigger: CTCCCACAGCGGGCTGGGGCATGGGCATTGATCGGC...GGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | TTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCAGCCGATCAATGCCCATaGCCCAGCCCGCTGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LVLLSCGGWTAVARWTAPADQCP*PSPLWE Trigger: CTCCCACAGCGGGCTGGGGCATGGGCATTGATCGGC...TGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | TTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCATGCCCCAGCCCGCTGTaGGAGGCAGCCCGTATTCCA | + |
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Preference number: 4 (lower is better) Translates to: LVLLSCGGWTAVARWTAPCPSPL*EAARIP Trigger: TGGAATACGGGCTGCCTCCCACAGCGGGCTGGGGCA...TGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | GAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGTGAAAGGAGCAAGGTaGCCCAGTCGAAGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: EVGLQWPDGRRHTGIAPSVKGAR*PSRSSL Trigger: GAGGGAACTTCGACTGGGCCACCTTGCTCCTTTCAC...TGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | CTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATGCTCGCCATCCACTTTaGCTTCACTCTCCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LSCGGWTAVARWTAPHRNARHPL*LHSPAA Trigger: CGCTGCAGGAGAGTGAAGTCAAAGTGGATGGCGAGC...ATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034426.14 |
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| CDS-3UTR TCA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGCTCAAAGCGCTCCGTaGGACCCTCTTTGGAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTAQSAP*DPLWSG Trigger: ACCGCTCCAAAGAGGGTCTCACGGAGCGCTTTGAGC...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAAGGGGCTGGCCTCTGTaGTCTCTGGGGTTTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTRGWPL*SLGFQW Trigger: CCACTGAAACCCCAGAGAGCACAGAGGCCAGCCCCT...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | CTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCACGTGGAACTTGTGTaGGTACGGATCCTCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLWRLDCSGQMDGATQESHVELV*VRILPS Trigger: ACTGGGGAGGATCCGTACCCACACAAGTTCCACGTG...CGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | GAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGATTCTTCGGAAGGGTaGGGTGAAGTCGACCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: EVGLQWPDGRRHTGIAPSDSSEG*GEVDLV Trigger: TACGAGGTCGACTTCACCCCACCCTTCCGAAGAATC...TGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | TTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCAGCTCAAAGCGCTCCGTaGGACCCTCTTTGGAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LVLLSCGGWTAVARWTAPAQSAP*DPLWSG Trigger: ACCGCTCCAAAGAGGGTCTCACGGAGCGCTTTGAGC...TGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR GCA 90 bp | TTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCAGGGGCTGGCCTCTGTaGTCTCTGGGGTTTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: FSSSLLWRLDCSGQMDGARGWPL*SLGFQW Trigger: CCACTGAAACCCCAGAGAGCACAGAGGCCAGCCCCT...GGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCCTTCCGGCCCATCTaGGTGGTAGGTGATCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SLVEVGLQWPDGRRHTGIAFRPI*VVGDLV Trigger: TACAAGATCACCTACCACCCAGATGGGCCGGAAGGC...GATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | TCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGCCTTCCGGCCCATCTaGGTGGTAGGTGATCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SSLLWRLDCSGQMDGATQAFRPI*VVGDLV Trigger: TACAAGATCACCTACCACCCAGATGGGCCGGAAGGC...CTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CCA 90 bp | TTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCCGGCAGCCTTGGCCTTaGCCTGCTCCTCAAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: FSSSLLWRLDCSGQMDGARQPWP*PAPQTA Trigger: AGCTGTTTGAGGAGCAGGCCAAGGCCAAGGCTGCCG...GGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | TTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCATTCGGAAGGGTGGGGTaGAGTCGACCTCGTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVLLSCGGWTAVARWTAPFGRVG*SRPRRL Trigger: AAGCCTACGAGGTCGACTTCACCCCACCCTTCCGAA...TGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR TCA 90 bp | AGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGAGAAGTTCTCGTCTATaGACATGGCCTCGTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLDCSGQMDGATQESLPQRSSRL*TWPRHH Trigger: GTGATGACGAGGCCATGTTCATAGACGAGAACTTCT...CTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCATAAACCCGGTCAATaGCACCAACCACCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWRLDCSGQMDGATQESHKPGQ*HQPPAS Trigger: AGATGCTGGTGGTTGGTGGCATTGACCGGGTTTATG...CGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | CTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTGGAGCGGAAGCAGTCTaGTTTAGCTGTTTCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LVEVGLQWPDGRRHTGIAGAEAV*FSCFSL Trigger: GAGTGAGAAACAGCTAAACCAGACTGCTTCCGCTCC...AGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGGGAGCGGAAGCAGTCTaGTTTAGCTGTTTCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSCGGWTAVARWTAPHRGAEAV*FSCFSL Trigger: GAGTGAGAAACAGCTAAACCAGACTGCTTCCGCTCC...CCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGCCTTCCGGCCCATCTaGGTGGTAGGTGATCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTAFRPI*VVGDLV Trigger: TACAAGATCACCTACCACCCAGATGGGCCGGAAGGC...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCAGTGGCTGGTCCTTGTaGAGCGTTGTGAAAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLVEVGLQWPDGRRHTGISGWSL*SVVKGA Trigger: TGCTCCTTTCACAACGCTCCACAAGGACCAGCCACT...GATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGGATGAACTGAGTGAGTaGGATGTCCACGTGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLWRLDCSGQMDGATQESDELSE*DVHVEL Trigger: AAGTTCCACGTGGACATCTCACTCACTCAGTTCATC...CGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | TTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCAGAAGTTCTCGTCTATaGACATGGCCTCGTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWRLDCSGQMDGATQESLRSSRL*TWPRHH Trigger: GTGATGACGAGGCCATGTTCATAGACGAGAACTTCT...GAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | TTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCCCCTCTTTGGAGCGGTaGCATTTGGCCAAAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: FSSSLLWRLDCSGQMDGAPSLER*HLAKGL Trigger: GAGTCCTTTGGCCAAATGGCACCGCTCCAAAGAGGG...GGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATGGTTTCAGTGGTCGCTaGAGTTTCCTTCTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCGGWTAVARWTAPHRNGFSGR*SFLLVL Trigger: GAGGACAAGAAGGAAACTGCAGCGACCACTGAAACC...ATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGCTTGTAGTATTGATTTaGGTCCAGAGTCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLDCSGQMDGATQESLPQLVVLI*VQSLLL Trigger: GAGGAGGAGACTCTGGACCCAAATCAATACTACAAG...CTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACGTGGAACTTGTGTaGGTACGGATCCTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLLSCGGWTAVARWTAPHVELV*VRILPS Trigger: ACTGGGGAGGATCCGTACCCACACAAGTTCCACGTG...TGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | TGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCATATCTCCTTCTTCATaGCAAACAGCTCAAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGGWTAVARWTAPHRNRSISPSS*QTAQSA Trigger: AGCGCTTTGAGCTGTTTGTCATGAAGAAGGAGATAT...GGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGCGGACGATAAATTTCTaGCTCACAAAGTCGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSCGGWTAVARWTAPHRRTINF*LTKSFR Trigger: CCTGAACGACTTTGTGAGGCAGAAATTTATCGTCCG...CCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | TTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCGAGGTCATGATAGTCTaGATAGGCCATGTAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LWRLDCSGQMDGATQESLEVMIV*IGHVEL Trigger: GAGTTCTACATGGCCTATGCAGACTATCATGACCTC...GAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | CTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTGAGGTCATGATAGTCTaGATAGGCCATGTAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LVEVGLQWPDGRRHTGIAEVMIV*IGHVEL Trigger: GAGTTCTACATGGCCTATGCAGACTATCATGACCTC...AGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGGAGGTCATGATAGTCTaGATAGGCCATGTAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLWRLDCSGQMDGATQESEVMIV*IGHVEL Trigger: GAGTTCTACATGGCCTATGCAGACTATCATGACCTC...CGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGTTTCAGTGGTCGCTaGAGTTTCCTTCTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTGFSGR*SFLLVL Trigger: GAGGACAAGAAGGAAACTGCAGCGACCACTGAAACC...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGCTTGTAGTATTGATTTaGGTCCAGAGTCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSCGGWTAVARWTAPHRLVVLI*VQSLLL Trigger: GAGGAGGAGACTCTGGACCCAAATCAATACTACAAG...CCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGCTCAAAGCGCTCCGTaGGACCCTCTTTGGAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NFFSSSLLWRLDCSGQMDAQSAP*DPLWSG Trigger: ACCGCTCCAAAGAGGGTCTCACGGAGCGCTTTGAGC...GTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGATATCTCCTTCTTCATaGCAAACAGCTCAAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSCGGWTAVARWTAPHRISPSS*QTAQSA Trigger: AGCGCTTTGAGCTGTTTGTCATGAAGAAGGAGATAT...CCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGATATCTCCTTCTTCATaGCAAACAGCTCAAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWRLDCSGQMDGATQESISPSS*QTAQSA Trigger: AGCGCTTTGAGCTGTTTGTCATGAAGAAGGAGATAT...CGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAAGAAGTTCTCGTCTATaGACATGGCCTCGTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTRSSRL*TWPRHH Trigger: GTGATGACGAGGCCATGTTCATAGACGAGAACTTCT...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGTGGATGCGGCCTaGCACTTTGAGGGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: NFFSSSLLWRLDCSGQMDGVDAA*HFEGDI Trigger: GATGTCACCCTCAAAGTGGCAGGCCGCATCCACGCC...GTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACTGCTCCTCAAACAGCTaGCTCTGCCGCACGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFFSSSLLWRLDCSGQMDCSSNS*LCRTGS Trigger: TGACCCCGTGCGGCAGAGGCAGCTGTTTGAGGAGCA...GTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | TTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCAGGTTTCAGTGGTCGCTaGAGTTTCCTTCTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLSCGGWTAVARWTAPGFSGR*SFLLVL Trigger: GAGGACAAGAAGGAAACTGCAGCGACCACTGAAACC...TGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGCTTGTAGTATTGATTTaGGTCCAGAGTCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLWRLDCSGQMDGATQLVVLI*VQSLLL Trigger: GAGGAGGAGACTCTGGACCCAAATCAATACTACAAG...CTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | AGAACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGGGCCTCTGTGCTCTCTaGGGTTTCAGTGGTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTSLVLLSCGGWTAVARWGLCAL*GFSGRC Trigger: GCAGCGACCACTGAAACCCCAGAGAGCACAGAGGCC...CCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGTCTTCAGCTCATTCTTaGTTAGTTTCTGCTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLWRLDCSGQMDGATQSSAHS*LVSARH Trigger: ATGGCGAGCAGAAACTAAGCAAGAATGAGCTGAAGA...CTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034426.14 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACCCCTCTTTGGAGCGGTaGCATTTGGCCAAAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: NFFSSSLLWRLDCSGQMDPSLER*HLAKGL Trigger: GAGTCCTTTGGCCAAATGGCACCGCTCCAAAGAGGG...GTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | AGAACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGCACGTGGAACTTGTGTaGGTACGGATCCTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTSLVLLSCGGWTAVARWHVELV*VRILPS Trigger: ACTGGGGAGGATCCGTACCCACACAAGTTCCACGTG...CCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | AGAACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGGATTCTTCGGAAGGGTaGGGTGAAGTCGACCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTSLVLLSCGGWTAVARWDSSEG*GEVDLV Trigger: TACGAGGTCGACTTCACCCCACCCTTCCGAAGAATC...CCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CCA 90 bp | AGAACTTCTTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGAGTGGCTGGTCCTTGTaGAGCGTTGTGAAAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTSLVLLSCGGWTAVARWSGWSL*SVVKGA Trigger: TGCTCCTTTCACAACGCTCCACAAGGACCAGCCACT...CCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| 3UTR CAA 72 bp | AAAAAGAACTTCTTTAGTTCTTCTCTCTTGTGGAGGTaGGACTGCAGTGGCCAGATGGACGGCGCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KKNFFSSSLLWR*DCSGQMDGATQ Trigger: CTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAAACAAATTCCTCCTCTaGTTTGTAATTCCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTNKFLL*FVIPGV Trigger: AACTCCAGGAATTACAAATCAGAGGAGGAATTTGTT...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR TCA 90 bp | TTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCAACAAATTCCTCCTCTaGTTTGTAATTCCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSSSLLWRLDCSGQMDGANKFLL*FVIPGV Trigger: AACTCCAGGAATTACAAATCAGAGGAGGAATTTGTT...GGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CAA 90 bp | AGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGCCGGCAGCCTTGGCCTaGGCCTGCTCCTCAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLDCSGQMDGATQESLPQPAALA*ACSSNS Trigger: GCTGTTTGAGGAGCAGGCCAAGGCCAAGGCTGCCGG...CTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CAA 90 bp | CTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCGGCAGCCTTGGCCTaGGCCTGCTCCTCAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVEVGLQWPDGRRHTGIAPAALA*ACSSNS Trigger: GCTGTTTGAGGAGCAGGCCAAGGCCAAGGCTGCCGG...AGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CAA 90 bp | AGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGTCATCACCGGCAGCCTaGGCCTTGGCCTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLDCSGQMDGATQESLPQSSPAA*ALACSS Trigger: TGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATGA...CTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCACTCAGCTCGCCCTTCTaGGTTTTCCCGGGATTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVGLQWPDGRRHTGIAPSLSSPF*VFPGLP Trigger: GGGCAATCCCGGGAAAACCAAGAAGGGCGAGCTGAG...TGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGTCATCACCGGCAGCCTaGGCCTTGGCCTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLLWRLDCSGQMDGATQSSPAA*ALACSS Trigger: TGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATGA...CTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACATCATCACCGGCAGCCTaGGCCTTGGCCTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTSSPAA*ALACSS Trigger: TGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATGA...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CAA 90 bp | CTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTTGCTCGCCATCCACTTaGACTTCACTCTCCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LVEVGLQWPDGRRHTGIACSPST*TSLSCS Trigger: GCTGCAGGAGAGTGAAGTCAAAGTGGATGGCGAGCA...AGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034426.14 |
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| CDS-3UTR CAA 90 bp | AGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGCTCCCTCAGGCTGCAGTTTCCTTCTaGTCCTCTGGCTTCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: RLDCSGQMDGATQESLPQAAVSF*SSGFMA Trigger: TGCCATGAAGCCAGAGGACAAGAAGGAAACTGCAGC...CTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CAA 90 bp | TTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACTCAGCTCGCCCTTCTaGGTTTTCCCGGGATTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LVLLSCGGWTAVARWTAPLSSPF*VFPGLP Trigger: GGGCAATCCCGGGAAAACCAAGAAGGGCGAGCTGAG...TGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CAA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGCTGCAGTTTCCTTCTaGTCCTCTGGCTTCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTAAVSF*SSGFMA Trigger: TGCCATGAAGCCAGAGGACAAGAAGGAAACTGCAGC...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS CCA 90 bp | CGCCTCTTCAGCTCACTTCTTCTATCAGAAAGTGGCTGGTCCTTGTaGAGCGTTGTGAAAGGAGCAAGGTGGCCCAGTCGAAGTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: RLFSSLLLSESGWSL*SVVKGARWPSRSSL Trigger: GAGGGAACTTCGACTGGGCCACCTTGCTCCTTTCACAACGCTCCACAAGGACCAGCCACTTTCTGATAGAAGAAGTGAGCTGAAGAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 ENSMUST00000211990.2 |
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| CDS-3UTR CAA 90 bp | TTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCGCTGCAGTTTCCTTCTaGTCCTCTGGCTTCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: FSSSLLWRLDCSGQMDGAAAVSF*SSGFMA Trigger: TGCCATGAAGCCAGAGGACAAGAAGGAAACTGCAGC...GGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS CCA 90 bp | GCTTTCAGACGCCTCTTCAGCTCACTTCTTCTATCAGAAAGTGGCTaGTCCTTGTGGAGCGTTGTGAAAGGAGCAAGGTGGCCCAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: AFRRLFSSLLLSESG*SLWSVVKGARWPSR Trigger: TCGACTGGGCCACCTTGCTCCTTTCACAACGCTCCACAAGGACCAGCCACTTTCTGATAGAAGAAGTGAGCTGAAGAGGCGTCTGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 ENSMUST00000211990.2 |
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| CDS-3UTR CAA 90 bp | CTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCGAGTACTTCCTTGATATaGTTGGAATCGGTGAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LLWRLDCSGQMDGATQESSTSLI*LESVRN Trigger: GTTTCTCACCGATTCCAACAATATCAAGGAAGTACT...CGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CAA 90 bp | TCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGAGTACTTCCTTGATATaGTTGGAATCGGTGAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SSLLWRLDCSGQMDGATQSTSLI*LESVRN Trigger: GTTTCTCACCGATTCCAACAATATCAAGGAAGTACT...CTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CAA 90 bp | CTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATAGTACTTCCTTGATATaGTTGGAATCGGTGAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LSCGGWTAVARWTAPHRNSTSLI*LESVRN Trigger: GTTTCTCACCGATTCCAACAATATCAAGGAAGTACT...ATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CAA 90 bp | TCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAGGAATCAACAGAAGTACTTCCTaGATATTGTTGGAATCGGTG | + |
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Preference number: 5 (lower is better) Translates to: SLVEVGLQWPDGRRHTGINRSTS*ILLESV Trigger: CACCGATTCCAACAATATCAAGGAAGTACTTCTGTT...GATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CAA 90 bp | TTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCACACAAACAGAAGTACTTCCTaGATATTGTTGGAATCGGTG | + |
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Preference number: 5 (lower is better) Translates to: FFSLVEVGLQWPDGRRHTNRSTS*ILLESV Trigger: CACCGATTCCAACAATATCAAGGAAGTACTTCTGTT...TGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS-3UTR CAA 90 bp | TTTAGTTCTTCTCTCTTGTGGAGGTTGGACTGCAGTGGCCAGATGGACGGCGCCAACAGAAGTACTTCCTaGATATTGTTGGAATCGGTG | + |
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Preference number: 5 (lower is better) Translates to: FSSSLLWRLDCSGQMDGANRSTS*ILLESV Trigger: CACCGATTCCAACAATATCAAGGAAGTACTTCTGTT...GGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS CAA 90 bp | CAGAAGTTCTCGTCTATGAACATGGCCTCGTCATCACCGGCAGCCTaGGCCTTGGCCTGCTCCTCAAACAGCTGCCTCTGCCGCACGGGG | + |
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Preference number: 6 (lower is better) Translates to: QKFSSMNMASSSPAA*ALACSSNSCLCRTG Trigger: CCCCGTGCGGCAGAGGCAGCTGTTTGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATGACGAGGCCATGTTCATAGACGAGAACTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS TCA 72 bp | GTGAAAGGAGCAAGGTGGCCCAGTCGAAGTTCCCTCTaGCCCCATTCTGCCCATGAGGTTTGGCGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: VKGARWPSRSSL*PHSAHEVWRRA Trigger: GGCCCTGCGCCAAACCTCATGGGCAGAATGGGGTCAGAGGGAACTTCGACTGGGCCACCTTGCTCCTTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 ENSMUST00000211990.2 |
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| CDS CAA 72 bp | TCGTCTATGAACATGGCCTCGTCATCACCGGCAGCCTaGGCCTTGGCCTGCTCCTCAAACAGCTGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSMNMASSSPAA*ALACSSNSCLC Trigger: GCAGAGGCAGCTGTTTGAGGAGCAGGCCAAGGCCAAGGCTGCCGGTGATGACGAGGCCATGTTCATAGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS CCA 72 bp | GTCTCCTCCTCAGCACCCACGCCATTGTCAGCCGTGTaGTTGGGAGCGGAAGCAGTCTGGTTTAGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VSSSAPTPLSAV*LGAEAVWFSCF Trigger: GAAACAGCTAAACCAGACTGCTTCCGCTCCCAACCACACGGCTGACAATGGCGTGGGTGCTGAGGAGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034426.14 ENSMUST00000093120.13 ENSMUST00000164470.3 |
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| CDS CAA 90 bp | AGACGCCTCTTCAGCTCACTTCTTCTATCAGAAAGTGGCTGGTCCTaGTGGAGCGTTGTGAAAGGAGCAAGGTGGCCCAGTCGAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RRLFSSLLLSESGWS*WSVVKGARWPSRSS Trigger: GGAACTTCGACTGGGCCACCTTGCTCCTTTCACAACGCTCCACAAGGACCAGCCACTTTCTGATAGAAGAAGTGAGCTGAAGAGGCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 ENSMUST00000211990.2 |
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| CDS CCA 72 bp | AGCTCACTTCTTCTATCAGAAAGTGGCTGGTCCTTGTaGAGCGTTGTGAAAGGAGCAAGGTGGCCCAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: SSLLLSESGWSL*SVVKGARWPSR Trigger: TCGACTGGGCCACCTTGCTCCTTTCACAACGCTCCACAAGGACCAGCCACTTTCTGATAGAAGAAGTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 ENSMUST00000211990.2 |
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| CDS CCA 72 bp | CGCCTCTTCAGCTCACTTCTTCTATCAGAAAGTGGCTaGTCCTTGTGGAGCGTTGTGAAAGGAGCAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RLFSSLLLSESG*SLWSVVKGARW Trigger: CCACCTTGCTCCTTTCACAACGCTCCACAAGGACCAGCCACTTTCTGATAGAAGAAGTGAGCTGAAGAGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 ENSMUST00000211990.2 |
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| CDS CCA 72 bp | CAGACGCCTCTTCAGCTCACTTCTTCTATCAGAAAGTaGCTGGTCCTTGTGGAGCGTTGTGAAAGGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: QTPLQLTSSIRK*LVLVERCERSK Trigger: CTTGCTCCTTTCACAACGCTCCACAAGGACCAGCCACTTTCTGATAGAAGAAGTGAGCTGAAGAGGCGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093120.13 ENSMUST00000164470.3 ENSMUST00000211990.2 |
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