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Pregenerated sensors for KANK4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035407

Ensembl transcript IDs: ENSMUST00000102790.4

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTaGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCC +
Preference number: 1 (lower is better)
Translates to: PGRDVSPEKALSYPG*LLLQPSWMSVHQGA
Trigger: GGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 90 bp GGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTaGTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGA +
Preference number: 1 (lower is better)
Translates to: GEMSVQRKLYLTLAG*YCSPAGCLCTKEPG
Trigger: TCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 90 bp TATCTTACCCTGGCTGGCTGCTACTGCAGCCCAGCTGGATGTCTGTaGACCAAGGAGCCAGGAAGTTCTCAGAGCTGGTACCTGCTTCTA +
Preference number: 1 (lower is better)
Translates to: YLTLAGCYCSPAGCL*TKEPGSSQSWYLLL
Trigger: TAGAAGCAGGTACCAGCTCTGAGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 90 bp AGTATTGCTTTTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTaGTACACAGGACTGCAAAGACAACGTCACGAGGAATTCAAAGCC +
Preference number: 1 (lower is better)
Translates to: SIAFSIVQGCPDLPA*YTGLQRQRHEEFKA
Trigger: GGCTTTGAATTCCTCGTGACGTTGTCTTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR TCA 90 bp ACTCCATGTAAAAAGTATTGCTTTTTCTATTGTGCAAGGGTGCCCTaGCCTACCTGCTTGCTACACAGGACTGCAAAGACAACGTCACGA +
Preference number: 1 (lower is better)
Translates to: TPCKKYCFFYCARVP*PTCLLHRTAKTTSR
Trigger: TCGTGACGTTGTCTTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAATACTTTTTACATGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR CCA 90 bp TTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATaGAGACTCCCAGAGGTAGGTTGTATACTTGCTTCCACCTTGGGG +
Preference number: 1 (lower is better)
Translates to: FLGYPDSKTFISCFL*RLPEVGCILASTLG
Trigger: CCCCAAGGTGGAAGCAAGTATACAACCTACCTCTGGGAGTCTCCATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR GCA 90 bp CCCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTTCTATTGTGCAAGGGTaGCCTGACCTACCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: PWERCQSRESSILPWLAASIVQG*PDLPAC
Trigger: GCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGA...AGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR CAA 90 bp GGACTGCAAAGACAACGTCACGAGGAATTCAAAGCCGAAGACGTTTaGAATTTCTGGATGACTCCACTGCAGCCTGCACTCTGCACCCCA +
Preference number: 2 (lower is better)
Translates to: GLQRQRHEEFKAEDV*NFWMTPLQPALCTP
Trigger: TGGGGTGCAGAGTGCAGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTCTTCGGCTTTGAATTCCTCGTGACGTTGTCTTTGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR CCA 90 bp TACCCACAAAAGCTTTGTGACTTAGCAGAGGGGTACCAAACAAATAGGCACCCCGGAAGTTCTCAGAGCTaGTACCTGCTTCTAGGGGCC +
Preference number: 2 (lower is better)
Translates to: YPQKLCDLAEGYQTNRHPGSSQS*YLLLGA
Trigger: GGCCCCTAGAAGCAGGTACCAGCTCTGAGAACTTCC...GGGGTGCCTATTTGTTTGGTACCCCTCTGCTAAGTCACAAAGCTTTTGTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR TCA 90 bp GCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTCAGAGCTGGTATGAGCAGAATTATATaGTGGGAATGTACTGTGCAT +
Preference number: 2 (lower is better)
Translates to: AAQLDVCAPRSQEVLRAGMSRII*WECTVH
Trigger: ATGCACAGTACATTCCCATCATATAATTCTGCTCAT...ACCAGCTCTGAGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR GCA 90 bp AGAGGCAACATTTTAATTTATAAACAAAAAGGACAGGCCGGAGCTGTGCTGCTCCTGGCTGGCTGCTACTaGAGCCCAGCTGGATGTCTG +
Preference number: 2 (lower is better)
Translates to: RGNILIYKQKGQAGAVLLLAGCY*SPAGCL
Trigger: CAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAG...GAGCAGCACAGCTCCGGCCTGTCCTTTTTGTTTATAAATTAAAATGTTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR CCA 90 bp GGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTGACATGCATAGTCACTaGAACATATTTGTATACACA +
Preference number: 2 (lower is better)
Translates to: GCYCSPAGCLCTKEPGSSDMHSH*NIFVYT
Trigger: TGTGTATACAAATATGTTCCAGTGACTATGCATGTC...AGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR TCA 90 bp CATAACAAGATCCCTGGGGCTGGATACACATTAACCTTTGTAAAGCATGGAGCTCCCACAAAAGCTTTGTaGCTTAGCAGAGGGGTACCA +
Preference number: 2 (lower is better)
Translates to: HNKIPGAGYTLTFVKHGAPTKAL*LSRGVP
Trigger: TGGTACCCCTCTGCTAAGTCACAAAGCTTTTGTGGG...AGCTCCATGCTTTACAAAGGTTAATGTGTATCCAGCCCCAGGGATCTTGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR GCA 90 bp ATGAGAATTCTTGCTTCAGTGTTTTCAGTGTACAGATCACCAATTTTGATGCTCCCAGCTGGATGTCTGTaGACCAAGGAGCCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: MRILASVFSVYRSPILMLPAGCL*TKEPGS
Trigger: ACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGG...GAGCATCAAAATTGGTGATCTGTACACTGAAAACACTGAAGCAAGAATTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR CCA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGAGCTCTATCTTACCCTaGCTGGCTGCTACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMSSILP*LAATAA
Trigger: GGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCT...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR GCA 90 bp AGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGGAGGCTGGCCAGTTCATTTaGTTCTCTCGTAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: SLSGLSRFQNFYKLFLMEAGQFI*FSRRLG
Trigger: TCCCAGCCTACGAGAGAAGCAAATGAACTGGCCAGC...CTCCATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR CCA 90 bp ATGAGAATTCTTGCTTCAGTGTTTTCAGTGTACAGATCACCAATTTTGATGCTCGACGTTTTGAATTTCTaGATGACTCCACTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: MRILASVFSVYRSPILMLDVLNF*MTPLQP
Trigger: AGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTC...GAGCATCAAAATTGGTGATCTGTACACTGAAAACACTGAAGCAAGAATTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR GCA 90 bp TTTGACATTGGAATAAATCCTCTTACAGCATTCTTTAAAGCTCGTCTGTTTTGCGATGGGAATGTACTGTaGATATTTGACATAGTTTCT +
Preference number: 2 (lower is better)
Translates to: FDIGINPLTAFFKARLFCDGNVL*IFDIVS
Trigger: AGAAACTATGTCAAATATGCACAGTACATTCCCATC...GCAAAACAGACGAGCTTTAAAGAATGCTGTAAGAGGATTTATTCCAATGTCAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp CTGGCTGGCTGCTACTGCAGCCCAGCTGGATGTCTGTaGACCAAGGAGCCAGGAAGTTCTCAGAGCTGGTAC +
Preference number: 3 (lower is better)
Translates to: LAGCYCSPAGCL*TKEPGSSQSWY
Trigger: GTACCAGCTCTGAGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR CCA 72 bp GAAGCGTGGCTGTGGTCTGACCGCATTGACGTCCTCTaGGCCCAGTTAGACACACAGAAACTCAGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: EAWLWSDRIDVL*AQLDTQKLRPP
Trigger: AGGAGGCCTGAGTTTCTGTGTGTCTAACTGGGCCCAGAGGACGTCAATGCGGTCAGACCACAGCCACGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp CAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTACTaGAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCA +
Preference number: 3 (lower is better)
Translates to: QRKLYLTLAGCY*SPAGCLCTKEP
Trigger: TGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp TCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTaGTACTGCAGCCCAGCTGGATGTCTGTGCACCAAG +
Preference number: 3 (lower is better)
Translates to: SVQRKLYLTLAG*YCSPAGCLCTK
Trigger: CTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR CCA 72 bp GATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTaGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCAC +
Preference number: 3 (lower is better)
Translates to: DVSPEKALSYPG*LLLQPSWMSVH
Trigger: GTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR CCA 72 bp GAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTaGCTGGCTGCTACTGCAGCCCAGCTGGATGTCTGT +
Preference number: 3 (lower is better)
Translates to: ERCQSRESSILP*LAATAAQLDVC
Trigger: ACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp AAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACTaGAAAGACAACGTCACGAGGAATTCAAAGCCGAAG +
Preference number: 3 (lower is better)
Translates to: KGALTYLLATQD*KDNVTRNSKPK
Trigger: CTTCGGCTTTGAATTCCTCGTGACGTTGTCTTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp ACCCTGGCACTGACATCACTGGGCTTAGTCCCACTTTaGCCGAATTTAGACTCCTCTGCCATTCTCTCTAGA +
Preference number: 3 (lower is better)
Translates to: TLALTSLGLVPL*PNLDSSAILSR
Trigger: TCTAGAGAGAATGGCAGAGGAGTCTAAATTCGGGCAAAGTGGGACTAAGCCCAGTGATGTCAGTGCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp GTGACCCACTCTCAGCAAGAAGCTGGCCAGTTCATTTaGTTCTCTCGTAGGCTGGGAATGGGTGAAATAACT +
Preference number: 3 (lower is better)
Translates to: VTHSQQEAGQFI*FSRRLGMGEIT
Trigger: AGTTATTTCACCCATTCCCAGCCTACGAGAGAAGCAAATGAACTGGCCAGCTTCTTGCTGAGAGTGGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR CCA 72 bp CCCAGGGGATACGGATGCTCAGGAAAGAACTATCCCTaGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTA +
Preference number: 3 (lower is better)
Translates to: PRGYGCSGKNYP*ERCQSRESSIL
Trigger: TAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGGGATAGTTCTTTCCTGAGCATCCGTATCCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp TTTCTTATGGAGACTCCCAGAGGTAGGTTGTATACTTaGTTCCACCTTGGGGACGATGACATTGTTACCCAC +
Preference number: 3 (lower is better)
Translates to: FLMETPRGRLYT*FHLGDDDIVTH
Trigger: GTGGGTAACAATGTCATCGTCCCCAAGGTGGAAGCAAGTATACAACCTACCTCTGGGAGTCTCCATAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR TCA 72 bp ACGAGGGATTCTGGGCATCTCTCACAAATCATGCTGTaGAAAGGACTTTGCTACAGAATGTCTGAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: TRDSGHLSQIML*KGLCYRMSEVS
Trigger: GCTGACTTCAGACATTCTGTAGCAAAGTCCTTTTCACAGCATGATTTGTGAGAGATGCCCAGAATCCCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR TCA 72 bp AAAAAGTATTGCTTTTTCTATTGTGCAAGGGTGCCCTaGCCTACCTGCTTGCTACACAGGACTGCAAAGACA +
Preference number: 3 (lower is better)
Translates to: KKYCFFYCARVP*PTCLLHRTAKT
Trigger: TGTCTTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAATACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp CATGTAAAAAGTATTGCTTTTTCTATTGTGCAAGGGTaGCCTGACCTACCTGCTTGCTACACAGGACTGCAA +
Preference number: 3 (lower is better)
Translates to: HVKSIAFSIVQG*PDLPACYTGLQ
Trigger: TTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAATACTTTTTACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR TCA 72 bp AATCATGCTGTGAAAAGGACTTTGCTACAGAATGTCTaGAGTCAGCCTTTCTGGGTTATCCAGATTCCAAAA +
Preference number: 3 (lower is better)
Translates to: NHAVKRTLLQNV*SQPFWVIQIPK
Trigger: TTTTGGAATCTGGATAACCCAGAAAGGCTGACTTCAGACATTCTGTAGCAAAGTCCTTTTCACAGCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR GCA 72 bp CTGGGAATGGGTGAAATAACTGGACTCTGTCAAGCATaGATCACTAGTATTAACCATTTGTTTTCTGCTTAC +
Preference number: 3 (lower is better)
Translates to: LGMGEITGLCQA*ITSINHLFSAY
Trigger: GTAAGCAGAAAACAAATGGTTAATACTAGTGATGCATGCTTGACAGAGTCCAGTTATTTCACCCATTCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR-3UTR CAA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGAAAGCCGAAGACGTTTaGAATTTCTGGATGACTCCA +
Preference number: 3 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMKAEDV*NFWMTP
Trigger: TGGAGTCATCCAGAAATTCAAAACGTCTTCGGCTTT...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR CCA 72 bp TATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATaGAGACTCCCAGAGGTAGGTTGTATACTTGCTTCC +
Preference number: 3 (lower is better)
Translates to: YPDSKTFISCFL*RLPEVGCILAS
Trigger: GGAAGCAAGTATACAACCTACCTCTGGGAGTCTCCATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp GGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTAGCTTGGAGGCGGGCTaGTTGATGGCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCYCSPAGCLCTKEPGSSSLEAG*LMALAS
Trigger: GCTGGCCAGCGCCATCAAGCAGCCCGCCTCCAAGCT...AGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTCAGAGCTGGTGTTTCCGGCAGGTGCTaGCTCAGTGTCTGGCACGCG +
Preference number: 4 (lower is better)
Translates to: AAQLDVCAPRSQEVLRAGVSGRC*LSVWHA
Trigger: CGCGTGCCAGACACTGAGCCAGCACCTGCCGGAAAC...ACCAGCTCTGAGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp CCCCTCGGGTACTTAGAAGTGTCACACCCTGGCACTGACATCACTGGGCTTAGTTGCTCCGGGGAGCTCTaGGGTGGCCTCCTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: PLGYLEVSHPGTDITGLSCSGEL*GGLLPD
Trigger: ATCAGGGAGGAGGCCACCTCAGAGCTCCCCGGAGCA...ACTAAGCCCAGTGATGTCAGTGCCAGGGTGTGACACTTCTAAGTACCCGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp CTCTATCTTACCCTGGCTGGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCATCACCCAGTGGCAGTaGCTGGGATGGCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LYLTLAGCYCSPAGCLCTITQWQ*LGWLLG
Trigger: ACCCAGGAGCCATCCCAGCCACTGCCACTGGGTGAT...GGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTGGTGACAGGCCAGCATaGGGGCGGAAGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: GCYCSPAGCLCTKEPGSSGDRPA*GRKIHH
Trigger: ATGATGGATCTTCCGCCCTCATGCTGGCCTGTCACC...AGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp CCCCTCGGGTACTTAGAAGTGTCACACCCTGGCACTGACATCACTGGGCTTAGTGGAAGACTCTCCTGCTaGCCTGCTCAAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PLGYLEVSHPGTDITGLSGRLSC*PAQAPS
Trigger: GCTGGGGGCTTGAGCAGGGCAGCAGGAGAGTCTTCC...ACTAAGCCCAGTGATGTCAGTGCCAGGGTGTGACACTTCTAAGTACCCGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp CCCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTCCAGGAAGACTCTCCTaGTGCCCTGCTCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PWERCQSRESSILPWLAAPGRLS*CPAQAP
Trigger: GGGGGCTTGAGCAGGGCAGCAGGAGAGTCTTCCTGG...AGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp GGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTCCTTGTCAGTCAGGCTaGTGTTGCAGGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GCYCSPAGCLCTKEPGSSPCQSG*CCRLGV
Trigger: CACACCCAGCCTGCAACAGCAGCCTGACTGACAAGG...AGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GGCCTCCTTTCAGACCTGCTGCATAACAAGATCCCTGGGGCTGGATACACATTATCGGCGTTGCCTTGGTaGCAGGCCAGCATGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLLSDLLHNKIPGAGYTLSALPW*QASMRA
Trigger: CGCCCTCATGCTGGCCTGTCACCAAGGCAACGCCGA...TAATGTGTATCCAGCCCCAGGGATCTTGTTATGCAGCAGGTCTGAAAGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp CCAGTTAGACACACAGAAACTCAGGCCTCCTTTCAGACCTGCTGCATAACAAGAGGACCTGCCCGGCTCTaGGTGGGCCCGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PVRHTETQASFQTCCITRGPARL*VGPQKL
Trigger: GAGCTTCTGCGGGCCCACTCAGAGCCGGGCAGGTCC...TCTTGTTATGCAGCAGGTCTGAAAGGAGGCCTGAGTTTCTGTGTGTCTAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp CCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTAGGGGACACTCTGGACTaGGGAGGAAGGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGRDVSPEKALSYPGWLLGDTLD*GGRTWL
Trigger: CAGCCAGGTCCTTCCTCCGCAGTCCAGAGTGTCCCC...TAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GGCCTCCTTTCAGACCTGCTGCATAACAAGATCCCTGGGGCTGGATACACATTACCTTGCACCGAGGCCTaGGGGAGATCACCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLLSDLLHNKIPGAGYTLPCTEA*GRSPSG
Trigger: GCCACTGGGTGATCTCCCCCAGGCCTCGGTGCAAGG...TAATGTGTATCCAGCCCCAGGGATCTTGTTATGCAGCAGGTCTGAAAGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTTCACATCCACTTCTATaGGTGGAGGGGGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: GCYCSPAGCLCTKEPGSSSHPLL*VEGVGS
Trigger: AGATCCCACCCCCTCCACCCATAGAAGTGGATGTGA...AGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp CCCCTCGGGTACTTAGAAGTGTCACACCCTGGCACTGACATCACTGGGCTTAGTGTGCACTCCAGCTCTTaGATCCTCTGTTCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: PLGYLEVSHPGTDITGLSVHSSS*ILCSLA
Trigger: GGCTAGGGAACAGAGGATTCAAGAGCTGGAGTGCAC...ACTAAGCCCAGTGATGTCAGTGCCAGGGTGTGACACTTCTAAGTACCCGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTGGAACCACTCCTGACTaGTGGTATTCAAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GCYCSPAGCLCTKEPGSSGTTPD*WYSSFA
Trigger: GGCAAAGCTTGAATACCATCAGTCAGGAGTGGTTCC...AGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp AGCTATGATTATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAGCAGGCATGCTGGATaGTCTCAACAGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SYDYEPSMYRTQGIRMLRSRHAG*SQQLGP
Trigger: CGGCCCCAGCTGTTGAGAGCATCCAGCATGCCTGCT...CCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATAATCATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp GCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTCAGAGCTGGTTCAGGCTGGAGATACTaGTGGTATCAGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AAQLDVCAPRSQEVLRAGSGWRY*WYQSPA
Trigger: TGCTGGAGACTGATACCAGCAGTATCTCCAGCCTGA...ACCAGCTCTGAGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp GGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTGATCCATCATTGTCCTaGAGGTTGACATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GCYCSPAGCLCTKEPGSSDPSLS*RLTSAW
Trigger: CCAGGCAGATGTCAACCTGCAGGACAATGATGGATC...AGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp CCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTAGAGGTCACCTTCTTCTaGTTCAGCCCCCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PGRDVSPEKALSYPGWLLEVTFF*FSPLPD
Trigger: GTCTGGGAGGGGGCTGAACCAGAAGAAGGTGACCTC...TAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp CTCTATCTTACCCTGGCTGGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCGGATCGGAATCCTTTTaGTGGTGTGTCCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LYLTLAGCYCSPAGCLCTGSESF*WCVPSQ
Trigger: TTGAGAAGGGACACACCATCAAAAGGATTCCGATCC...GGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCCAGCCAGGGTAAGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp ATTGCTTTTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGAAGGTCCCCTTGGCAGTaGCAGTTGGGGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: IAFSIVQGCPDLPACYTGRSPWQ*QLGWQH
Trigger: GTGCTGCCACCCCAACTGTCACTGCCAAGGGGACCT...TCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp GGCTGCTACTGCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTGTACTAAACTTAGCCTaGTTGGCTCGTCTGTGGATC +
Preference number: 4 (lower is better)
Translates to: GCYCSPAGCLCTKEPGSSVLNLA*LARLWI
Trigger: GATCCACAGACGAGCCAAGCAGGCTAAGTTTAGTAC...AGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGCAGTAGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp CCCCTCGGGTACTTAGAAGTGTCACACCCTGGCACTGACATCACTGGGCTTAGTTTGGTCTCTTCTTCCTaGTGCTCAAGGGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLGYLEVSHPGTDITGLSLVSSS*CSRAAL
Trigger: CAGAGCTGCCCTTGAGCAGCAGGAAGAAGAGACCAA...ACTAAGCCCAGTGATGTCAGTGCCAGGGTGTGACACTTCTAAGTACCCGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp AGCTATGATTATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGGATGCTCTCAACAGCTaGGGCCGTCCACTCCCTACA +
Preference number: 4 (lower is better)
Translates to: SYDYEPSMYRTQGIRMLRDALNS*GRPLPT
Trigger: TGTAGGGAGTGGACGGCCCCAGCTGTTGAGAGCATC...CCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATAATCATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp CCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTAATCCACTTCTATGGGTaGAGGGGGTGGGATCTCGCT +
Preference number: 4 (lower is better)
Translates to: PGRDVSPEKALSYPGWLLIHFYG*RGWDLA
Trigger: AGCGAGATCCCACCCCCTCCACCCATAGAAGTGGAT...TAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp CCCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTAGGTTGACATCTGCCTaGCAGCTCAGTAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PWERCQSRESSILPWLAARLTSA*QLSSAW
Trigger: CCAAGCACTACTGAGCTGCCAGGCAGATGTCAACCT...AGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp AGCTATGATTATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGTCGGGGACCTGGTTTTaGAGCAGTGTAGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: SYDYEPSMYRTQGIRMLRSGTWF*SSVAGM
Trigger: CATGCCTGCTACACTGCTGCAAAACCAGGTCCCCGA...CCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATAATCATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp TTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACTGCAAAGCCTCACAGCTGGGATaGAAGTCTCTGTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: FLLCKGALTYLLATQDCKASQLG*KSLSSL
Trigger: CAGGGAGGACAGAGACTTGCATCCCAGCTGTGAGGC...TTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GAATTCAAAGCCGAAGACGTTTTGAATTTCTGGATGACTCCACTGCAGCCTGCAGGGGAGATCACCCAGTaGCAGTGGCTGGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: EFKAEDVLNFWMTPLQPAGEITQ*QWLGWL
Trigger: GAGCCATCCCAGCCACTGCCACTGGGTGATCTCCCC...TGCAGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTCTTCGGCTTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp TTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACTGCAAACATCTTGTGGGGAACTaGCTGGCCTTCCTGGACGCT +
Preference number: 4 (lower is better)
Translates to: FLLCKGALTYLLATQDCKHLVGN*LAFLDA
Trigger: AGCGTCCAGGAAGGCCAGCCAGTTCCCCACAAGATG...TTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp AGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTACTGCAGTGTGGCCTGAGTTTCTaGTGCCTTCAGGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: RDVSPEKALSYPGWLLLQCGLSF*CLQGLP
Trigger: AGGGAGTCCCTGAAGGCACCAGAAACTCAGGCCACA...CTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GGCCTCCTTTCAGACCTGCTGCATAACAAGATCCCTGGGGCTGGATACACATTAATGCTTGGAAACCCATaGGCCCTTCTGCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: GLLSDLLHNKIPGAGYTLMLGNP*ALLQGQ
Trigger: TTGACCCTGCAGAAGGGCTCATGGGTTTCCAAGCAT...TAATGTGTATCCAGCCCCAGGGATCTTGTTATGCAGCAGGTCTGAAAGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GGCCTCCTTTCAGACCTGCTGCATAACAAGATCCCTGGGGCTGGATACACATTACTGAGAGAGGTGACTTaGAGCCTTGAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: GLLSDLLHNKIPGAGYTLLREVT*SLEVTF
Trigger: GAAGGTGACCTCAAGGCTTCAAGTCACCTCTCTCAG...TAATGTGTATCCAGCCCCAGGGATCTTGTTATGCAGCAGGTCTGAAAGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTCAGAGCTGGTGAGTGTTCAGCAGATTaGCCCCAATGTTCTTATCAT +
Preference number: 4 (lower is better)
Translates to: AAQLDVCAPRSQEVLRAGECSAD*PQCSYH
Trigger: ATGATAAGAACATTGGGGTCAATCTGCTGAACACTC...ACCAGCTCTGAGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GAAGACGTTTTGAATTTCTGGATGACTCCACTGCAGCCTGCACTCTGCACCCCATTCCACGTGGGCAGGTaGATTCAGAACGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: EDVLNFWMTPLQPALCTPFHVGR*IQNEGQ
Trigger: TTGTCCCTCGTTCTGAATTCACCTGCCCACGTGGAA...TGGGGTGCAGAGTGCAGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp GCAGCCCAGCTGGATGTCTGTGCACCAAGGAGCCAGGAAGTTCTCAGAGCTGGTATCTTCTTCACATACTaGCCGATTGTGGCATCTTGT +
Preference number: 4 (lower is better)
Translates to: AAQLDVCAPRSQEVLRAGIFFTY*PIVASC
Trigger: ACAAGATGCCACAATCGGGCAGTATGTGAAGAAGAT...ACCAGCTCTGAGAACTTCCTGGCTCCTTGGTGCACAGACATCCAGCTGGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp CATAACAAGATCCCTGGGGCTGGATACACATTAACCTTTGTAAAGCATGGAGCTCCTTCAGGGACTCCCTaGCCAGCCTCACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HNKIPGAGYTLTFVKHGAPSGTP*PASQLG
Trigger: TCCCAGCTGTGAGGCTGGGCAGGGAGTCCCTGAAGG...AGCTCCATGCTTTACAAAGGTTAATGTGTATCCAGCCCCAGGGATCTTGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GAATTCAAAGCCGAAGACGTTTTGAATTTCTGGATGACTCCACTGCAGCCTGCAGGAGGGCAAGAAGTGTaGAAGGGCCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EFKAEDVLNFWMTPLQPAGGQEV*KGLRSG
Trigger: GCCTGACCTCAGGCCCTTCCACACTTCTTGCCCTCC...TGCAGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTCTTCGGCTTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GAATTCAAAGCCGAAGACGTTTTGAATTTCTGGATGACTCCACTGCAGCCTGCAGATCATTCTCAAGGATaGGGGAGGGCAGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: EFKAEDVLNFWMTPLQPADHSQG*GRAEGA
Trigger: CGCCCCCTCTGCCCTCCCCCATCCTTGAGAATGATC...TGCAGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTCTTCGGCTTTGAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp TTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACTGCAAAGGCTGGAGATACTGCTaGTATCAGTCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLLCKGALTYLLATQDCKGWRYC*YQSPAG
Trigger: GCCTGCTGGAGACTGATACCAGCAGTATCTCCAGCC...TTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp AGCTATGATTATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAGGGAACTGAGCAGTTaGTTCTGGATGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SYDYEPSMYRTQGIRMLRRELSS*FWMLLS
Trigger: GCTCAGCAGCATCCAGAACCAACTGCTCAGTTCCCT...CCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATAATCATAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GAAGACGTTTTGAATTTCTGGATGACTCCACTGCAGCCTGCACTCTGCACCCCACCACGATCACTTGTGTaGCCTGAGTTTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: EDVLNFWMTPLQPALCTPPRSLV*PEFLVP
Trigger: AGGCACCAGAAACTCAGGCCACACAAGTGATCGTGG...TGGGGTGCAGAGTGCAGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp ATTTTAATTTATAAACAAAAAGGACAGGCCGGAGCTGTGCTGCTCGAAGCGTGGGCTGCTGTTGCAGGCTaGGTGTGCCAGGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: ILIYKQKGQAGAVLLEAWAAVAG*VCQEQS
Trigger: CGACTGCTCCTGGCACACCCAGCCTGCAACAGCAGC...CCACGCTTCGAGCAGCACAGCTCCGGCCTGTCCTTTTTGTTTATAAATTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp CCAGTTAGACACACAGAAACTCAGGCCTCCTTTCAGACCTGCTGCATAACAAGATTCTCTTCATCCCCCTaGGAGGACTGGTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: PVRHTETQASFQTCCITRFSSSP*EDWSLP
Trigger: TGGCAAGGACCAGTCCTCTCAGGGGGATGAAGAGAA...TCTTGTTATGCAGCAGGTCTGAAAGGAGGCCTGAGTTTCTGTGTGTCTAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp ATTGCTTTTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACACTGTTGGGAAGGCTaGAGTTTCGGGGCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: IAFSIVQGCPDLPACYTGHCWEG*SFGAEY
Trigger: GTACTCTGCCCCGAAACTTCAGCCTTCCCAACAGTG...TCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGTGGAGGCGGGCTGCTTaGTGGCGCTGGCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMWRRAA*WRWPAP
Trigger: CGGAGCTGGCCAGCGCCATCAAGCAGCCCGCCTCCA...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp TTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACTGCAAAATCACTTGTGTGGCCTaGGTTTCTGGTGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FLLCKGALTYLLATQDCKITCVA*VSGAFR
Trigger: CCTGAAGGCACCAGAAACTCAGGCCACACAAGTGAT...TTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp TTAACCATTTGTTTTCTGCTTACTTCCATAGAAGGAATGGAGCCCCTCGGGTACGTTGCAGGCTGGGTGTaGCAGGAGCAGTCGTACCAG +
Preference number: 4 (lower is better)
Translates to: LTICFLLTSIEGMEPLGYVAGWV*QEQSYQ
Trigger: CTGGTACGACTGCTCCTGGCACACCCAGCCTGCAAC...GTACCCGAGGGGCTCCATTCCTTCTATGGAAGTAAGCAGAAAACAAATGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGGGGGCGGGCTGGGCGTaGCGGAGCCAGGCGTTAACA +
Preference number: 4 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMGAGWA*RSQALT
Trigger: TGTTAACGCCTGGCTCCGCCACGCCCAGCCCGCCCC...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp AGCTATGATTATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGCCAATGTTCTTATCATaGGACTCTCGGGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SYDYEPSMYRTQGIRMLRPMFLS*DSRGVS
Trigger: GCTCACTCCCCGAGAGTCCCATGATAAGAACATTGG...CCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATAATCATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp AGCTATGATTATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGGTTCTTTTCTGCTCTTaGTGCCCGGCATTCAGGATC +
Preference number: 4 (lower is better)
Translates to: SYDYEPSMYRTQGIRMLRVLFCS*CPAFRI
Trigger: GATCCTGAATGCCGGGCACCAAGAGCAGAAAAGAAC...CCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATAATCATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp AAGATCCCTGGGGCTGGATACACATTAACCTTTGTAAAGCATGGAGCTAACGTTCAATCCGGAGCTCCATaGAGAGGCAGCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: KIPGAGYTLTFVKHGANVQSGAP*RGSCTG
Trigger: CCCTGTGCAGCTGCCTCTCCATGGAGCTCCGGATTG...AACGTTAGCTCCATGCTTTACAAAGGTTAATGTGTATCCAGCCCCAGGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GGCCTCCTTTCAGACCTGCTGCATAACAAGATCCCTGGGGCTGGATACACATTAACACGGAACCACTCCTaGCTGATGGTATTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GLLSDLLHNKIPGAGYTLTRNHS*LMVFKL
Trigger: AAGCTTGAATACCATCAGTCAGGAGTGGTTCCGTGT...TAATGTGTATCCAGCCCCAGGGATCTTGTTATGCAGCAGGTCTGAAAGGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp ATTGCTTTTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGAAGAAGATATGGAGAGTaGGGCTGGACCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: IAFSIVQGCPDLPACYTGRRYGE*GWTSRR
Trigger: CCTCCTTGAGGTCCAGCCTCACTCTCCATATCTTCT...TCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp AGCTATGATTATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGCTAAATGGGCTACAGTaGACTCCAGCTCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: SYDYEPSMYRTQGIRMLRLNGLQ*TPALES
Trigger: GGATTCAAGAGCTGGAGTGCACTGTAGCCCATTTAG...CCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATAATCATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp TTCTGGGCATCTCTCACAAATCATGCTGTGAAAAGGACTTTGCTACAGAATGTCCCAGTTTCCGGCAGGTaGTGGCTCAGTGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FWASLTNHAVKRTLLQNVPVSGR*WLSVWH
Trigger: GTGCCAGACACTGAGCCAGCACCTGCCGGAAACTGG...GACATTCTGTAGCAAAGTCCTTTTCACAGCATGATTTGTGAGAGATGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp TATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAAAGAACTAAGTCTCTGTCCTCCCTaGACTCTGAGCAATCCTGTT +
Preference number: 4 (lower is better)
Translates to: YEPSMYRTQGIRMLRKELSLCPP*TLSNPV
Trigger: AACAGGATTGCTCAGAGTCCAGGGAGGACAGAGACT...TAGTTCTTTCCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp TATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAAAGAACTATCTGCGATTTCCACGTaGGCAGGTGAATTCAGAACG +
Preference number: 4 (lower is better)
Translates to: YEPSMYRTQGIRMLRKELSAIST*AGEFRT
Trigger: CGTTCTGAATTCACCTGCCCACGTGGAAATCGCAGA...TAGTTCTTTCCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp TATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAAAGAACTATTCGGTCAGCCAGGTTaGCAAGTAGCTTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: YEPSMYRTQGIRMLRKELFGQPG*QVASED
Trigger: ATCTTCTGAAGCTACTTGTCAACCTGGCTGACCGAA...TAGTTCTTTCCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp ATTGCTTTTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGAGCAGTCTGTCCTCCCTaGGTTGCTTGTATGTTCACA +
Preference number: 4 (lower is better)
Translates to: IAFSIVQGCPDLPACYTGAVCPP*VACMFT
Trigger: TGTGAACATACAAGCAACTCAGGGAGGACAGACTGC...TCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp ATTTTAATTTATAAACAAAAAGGACAGGCCGGAGCTGTGCTGCTCGAAGCGTGGCATTGTCCTGCAGGTTaGCATCTGCCTGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ILIYKQKGQAGAVLLEAWHCPAG*HLPGSS
Trigger: TGAGCTGCCAGGCAGATGTCAACCTGCAGGACAATG...CCACGCTTCGAGCAGCACAGCTCCGGCCTGTCCTTTTTGTTTATAAATTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp TATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAAAGAACTATCTGATGATCCACATTaGAGACACCTGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: YEPSMYRTQGIRMLRKELSDDPH*RHLCPA
Trigger: TGCTGGACACAGGTGTCTGCAATGTGGATCATCAGA...TAGTTCTTTCCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GAATTCAAAGCCGAAGACGTTTTGAATTTCTGGATGACTCCACTGCAGCCTGCACTGAGCAGTTGGTTCTaGATGCTGCTGAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EFKAEDVLNFWMTPLQPALSSWF*MLLSLE
Trigger: CTCCAAGCTCAGCAGCATCCAGAACCAACTGCTCAG...TGCAGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTCTTCGGCTTTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp AGAGGCAACATTTTAATTTATAAACAAAAAGGACAGGCCGGAGCTGTGCTGCTCCAGCTCAGTAGTGCTTaGACCATGTCCTCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: RGNILIYKQKGQAGAVLLQLSSA*TMSSRS
Trigger: CGACCGGGAGGACATGGTCCAAGCACTACTGAGCTG...GAGCAGCACAGCTCCGGCCTGTCCTTTTTGTTTATAAATTAAAATGTTGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp TATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAAAGAACTATCGCTGGCCCTCTCTTaGCTAAGCTTTTCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: YEPSMYRTQGIRMLRKELSLALS*LSFSSK
Trigger: TTTAGAAGAAAAGCTTAGTCAAGAGAGGGCCAGCGA...TAGTTCTTTCCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp TTCTGGGCATCTCTCACAAATCATGCTGTGAAAAGGACTTTGCTACAGAATGTCACCCATGAGCCCTTCTaGAGGGTCAAAGGCACCATC +
Preference number: 4 (lower is better)
Translates to: FWASLTNHAVKRTLLQNVTHEPF*RVKGTI
Trigger: GATGGTGCCTTTGACCCTGCAGAAGGGCTCATGGGT...GACATTCTGTAGCAAAGTCCTTTTCACAGCATGATTTGTGAGAGATGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp TATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAAAGAACTAGCTTCTCTCATGTGGTaGTCAATTTCCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YEPSMYRTQGIRMLRKELASLMW*SISTSS
Trigger: AGAGGAAGTGGAAATTGAGCACCACATGAGAGAAGC...TAGTTCTTTCCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGACTCTCCTGCTGCCCTaGTCAAGCCCCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMTLLLP*SSPQLP
Trigger: AGGGAGCTGGGGGCTTGAGCAGGGCAGCAGGAGAGT...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp CATAACAAGATCCCTGGGGCTGGATACACATTAACCTTTGTAAAGCATGGAGCTCTTTGCCTCAGGAGCTaGTTGGTGGTATCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: HNKIPGAGYTLTFVKHGALCLRS*LVVSPV
Trigger: AACTGGGGATACCACCAAGCAGCTCCTGAGGCAAAG...AGCTCCATGCTTTACAAAGGTTAATGTGTATCCAGCCCCAGGGATCTTGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp TATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAAAGAACTATCATGGAGAAGCTCTTaGATCTTCTTCACATACTGC +
Preference number: 4 (lower is better)
Translates to: YEPSMYRTQGIRMLRKELSWRSS*IFFTYC
Trigger: GCAGTATGTGAAGAAGATTCAAGAGCTTCTCCATGA...TAGTTCTTTCCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp CATAACAAGATCCCTGGGGCTGGATACACATTAACCTTTGTAAAGCATGGAGCTGGTCCCATTACCTCCTaGACGGAAGCCATAGTCTTT +
Preference number: 4 (lower is better)
Translates to: HNKIPGAGYTLTFVKHGAGPITS*TEAIVF
Trigger: AAAGACTATGGCTTCCGTGCAGGAGGTAATGGGACC...AGCTCCATGCTTTACAAAGGTTAATGTGTATCCAGCCCCAGGGATCTTGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp ATGAGAATTCTTGCTTCAGTGTTTTCAGTGTACAGATCACCAATTTTGATGCTCGTACCAGGTCGGCGTTaGCTTGGTGACAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: MRILASVFSVYRSPILMLVPGRR*LGDRPA
Trigger: TGCTGGCCTGTCACCAAGGCAACGCCGACCTGGTAC...GAGCATCAAAATTGGTGATCTGTACACTGAAAACACTGAAGCAAGAATTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp ATGAGAATTCTTGCTTCAGTGTTTTCAGTGTACAGATCACCAATTTTGATGCTCTTGTGGGGAACTGGCTaGCCTTCCTGGACGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MRILASVFSVYRSPILMLLWGTG*PSWTLC
Trigger: GCAGAGCGTCCAGGAAGGCCAGCCAGTTCCCCACAA...GAGCATCAAAATTGGTGATCTGTACACTGAAAACACTGAAGCAAGAATTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp ATTGCTTTTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGAACTGAAGGTTCTTTTTaGTCCCATTACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: IAFSIVQGCPDLPACYTGTEGSF*SHYLLH
Trigger: GTGCAGGAGGTAATGGGACCAAAAAGAACCTTCAGT...TCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp ATTTTAATTTATAAACAAAAAGGACAGGCCGGAGCTGTGCTGCTCGAAGCGTGGTGCTGGCTCAGTGTCTaGCACGCGTTAAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: ILIYKQKGQAGAVLLEAWCWLSV*HALRNS
Trigger: GGAATTTCTTAACGCGTGCCAGACACTGAGCCAGCA...CCACGCTTCGAGCAGCACAGCTCCGGCCTGTCCTTTTTGTTTATAAATTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGGGGGTGGGATCTCGCTaGTGCTCAGCTCGATTTCGT +
Preference number: 4 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMGVGSR*CSARFR
Trigger: ACGAAATCGAGCTGAGCATCAGCGAGATCCCACCCC...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp TATGAGCCTTCCATGTACAGGACCCAGGGGATACGGATGCTCAGGAAAGAACTAGTTAAGAAATTCCTCTaGGGGTTTATATCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: YEPSMYRTQGIRMLRKELVKKFL*GFISLS
Trigger: GCTGAGAGATATAAACCCTCAGAGGAATTTCTTAAC...TAGTTCTTTCCTGAGCATCCGTATCCCCTGGGTCCTGTACATGGAAGGCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp ATTTTAATTTATAAACAAAAAGGACAGGCCGGAGCTGTGCTGCTCGAAGCGTGGTTACCCGGATCCCAATaGTCCTCACATCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: ILIYKQKGQAGAVLLEAWLPGSQ*SSHPLL
Trigger: TAGAAGTGGATGTGAGGAGCATTGGGATCCGGGTAA...CCACGCTTCGAGCAGCACAGCTCCGGCCTGTCCTTTTTGTTTATAAATTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp ATGAGAATTCTTGCTTCAGTGTTTTCAGTGTACAGATCACCAATTTTGATGCTCTATGGGTGGAGGGGGTaGGATCTCGCTGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: MRILASVFSVYRSPILMLYGWRG*DLADAQ
Trigger: CTGAGCATCAGCGAGATCCCACCCCCTCCACCCATA...GAGCATCAAAATTGGTGATCTGTACACTGAAAACACTGAAGCAAGAATTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGCTGCCTGGCATCCTTTaGCAAGAGAGCCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMLPGIL*QESLPV
Trigger: CACAGGAAGGCTCTCTTGGCAAAGGATGCCAGGCAG...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp ATGAGAATTCTTGCTTCAGTGTTTTCAGTGTACAGATCACCAATTTTGATGCTCGTCTCTTCTTCCTGCTaGTCAAGGGCAGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: MRILASVFSVYRSPILMLVSSSC*SRAALT
Trigger: GGTCAGAGCTGCCCTTGAGCAGCAGGAAGAAGAGAC...GAGCATCAAAATTGGTGATCTGTACACTGAAAACACTGAAGCAAGAATTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp ACTTTTATAAGCTGTTTCTTATGGAGACTCCCAGAGGTAGGTTGTATACTTGCTAAGTCCAAGTCCAGATaGAAACCATACGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TFISCFLWRLPEVGCILAKSKSR*KPYGVS
Trigger: GGAGACCCCGTATGGTTTTCATCTGGACTTGGACTT...AGCAAGTATACAACCTACCTCTGGGAGTCTCCATAAGAAACAGCTTATAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GAAGTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTCAGAAGCCAAGGGAGTaGTCATCACAGCAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: EVSLSGLSRFQNFYKLFLQKPRE*SSQQCS
Trigger: GCTACACTGCTGTGATGATCACTCCCTTGGCTTCTG...AAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR GCA 90 bp TTTGACATTGGAATAAATCCTCTTACAGCATTCTTTAAAGCTCGTCTGTTTTGCCACCATCACACACACTaGCTTCATCCTGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FDIGINPLTAFFKARLFCHHHTH*LHPGAE
Trigger: CTCTGCTCCAGGATGAAGGCAGTGTGTGTGATGGTG...GCAAAACAGACGAGCTTTAAAGAATGCTGTAAGAGGATTTATTCCAATGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
3UTR CAA 72 bp GGACTCTGTCAAGCATGCATCACTAGTATTAACCATTaGTTTTCTGCTTACTTCCATAGAAGGAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GLCQACITSINH*FSAYFHRRNGA
Trigger: GGCTCCATTCCTTCTATGGAAGTAAGCAGAAAACAAATGGTTAATACTAGTGATGCATGCTTGACAGAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR TCA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGTTAACCCCAACAAACTaGAGGTTCTTTTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMLTPTN*RFFLVP
Trigger: TGGGACCAAAAAGAACCTTCAGTTTGTTGGGGTTAA...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CCA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGATTATTTTGGACCCATaGGAAGCCGTTCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMIILDP*EAVLFC
Trigger: GCAGAAAAGAACGGCTTCCCATGGGTCCAAAATAAT...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp CGGAGCTCCATGGAGAGGCAGCTGCACAGGGATGAGGCGAGGATCTaGTCAGGTCCCCTTGGCAGTGACAGTTGGGGTGGCAGCACGGGT +
Preference number: 5 (lower is better)
Translates to: RSSMERQLHRDEARI*SGPLGSDSWGGSTG
Trigger: ACCCGTGCTGCCACCCCAACTGTCACTGCCAAGGGGACCTGAGCAGATCCTCGCCTCATCCCTGTGCAGCTGCCTCTCCATGGAGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp GGGAGAGATCATTCTCAAGGATGGGGGAGGGCAGAGGGGGCGGGCTaGGCGTGGCGGAGCCAGGCGTTAACACCAGCTCTGCTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GRDHSQGWGRAEGAG*AWRSQALTPALLLS
Trigger: TGAGAGAAGCAGAGCTGGTGTTAACGCCTGGCTCCGCCACGCCCAGCCCGCCCCCTCTGCCCTCCCCCATCCTTGAGAATGATCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp TGGGGAACTGGCTGGCCTTCCTGGACGCTCTGCTCCGGGGAGCTCTaGGGTGGCCTCCTCCCTGATCACGGGAGCAGATTCTCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: WGTGWPSWTLCSGEL*GGLLPDHGSRFSCA
Trigger: AGCACAAGAGAATCTGCTCCCGTGATCAGGGAGGAGGCCACCTCAGAGCTCCCCGGAGCAGAGCGTCCAGGAAGGCCAGCCAGTTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp TTCTTCTGCAGCTCCTTCGGCCCCAGGGACCTGCCCGGCTCTGAGTaGGCCCGCAGAAGCTCTGCGATTTCCACGTGGGCAGGTGAATTC +
Preference number: 5 (lower is better)
Translates to: FFCSSFGPRDLPGSE*ARRSSAISTWAGEF
Trigger: GAATTCACCTGCCCACGTGGAAATCGCAGAGCTTCTGCGGGCCCACTCAGAGCCGGGCAGGTCCCTGGGGCCGAAGGAGCTGCAGAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp GGCCTCCCTCCTGCTCAGAACCCTCCTCTTCAATCCGGAGCTCCATaGAGAGGCAGCTGCACAGGGATGAGGCGAGGATCTGCTCAGGTC +
Preference number: 5 (lower is better)
Translates to: GLPPAQNPPLQSGAP*RGSCTGMRRGSAQV
Trigger: GACCTGAGCAGATCCTCGCCTCATCCCTGTGCAGCTGCCTCTCCATGGAGCTCCGGATTGAAGAGGAGGGTTCTGAGCAGGAGGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp CAAAGCTGTTCGGCCAGCCTTGTCAGTCAGGCTGCTGTTGCAGGCTaGGTGTGCCAGGAGCAGTCGTACCAGGTCGGCGTTGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: QSCSASLVSQAAVAG*VCQEQSYQVGVALV
Trigger: CACCAAGGCAACGCCGACCTGGTACGACTGCTCCTGGCACACCCAGCCTGCAACAGCAGCCTGACTGACAAGGCTGGCCGAACAGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp CTGCCCGGCTCTGAGTGGGCCCGCAGAAGCTCTGCGATTTCCACGTaGGCAGGTGAATTCAGAACGAGGGACAAAGCTGTTCGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LPGSEWARRSSAIST*AGEFRTRDKAVRPA
Trigger: GGCTGGCCGAACAGCTTTGTCCCTCGTTCTGAATTCACCTGCCCACGTGGAAATCGCAGAGCTTCTGCGGGCCCACTCAGAGCCGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp TTCCTGGACGCTCTGCTCCGGGGAGCTCTGAGGTGGCCTCCTCCCTaGTCACGGGAGCAGATTCTCTTGTGCTCCAGGAAGACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: FLDALLRGALRWPPP*SREQILLCSRKTLL
Trigger: CAGGAGAGTCTTCCTGGAGCACAAGAGAATCTGCTCCCGTGATCAGGGAGGAGGCCACCTCAGAGCTCCCCGGAGCAGAGCGTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp CCCCTCGGGTACTTAGAAGTGTCACACCCTGGCACTGACATCACTGGGCTTAGTTTGGAGGCGGGCTGCTaGATGGCGCTGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLGYLEVSHPGTDITGLSLEAGC*MALASS
Trigger: GGAGCTGGCCAGCGCCATCAAGCAGCCCGCCTCCAA...ACTAAGCCCAGTGATGTCAGTGCCAGGGTGTGACACTTCTAAGTACCCGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp GGACTGCGGAGGAAGGACCTGGCTGAGAGAGGTGACTTGAAGCCTTaGGGTCACCTTCTTCTGGTTCAGCCCCCTCCCAGACCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GLRRKDLAERGDLKP*GHLLLVQPPPRPAL
Trigger: CAGAGCAGGTCTGGGAGGGGGCTGAACCAGAAGAAGGTGACCTCAAGGCTTCAAGTCACCTCTCTCAGCCAGGTCCTTCCTCCGCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp TGGCATCCTTTGCCAAGAGAGCCTTCCTGTGGTAGTTCAGCTCACTaGCTTGCACCGAGGCCTGGGGGAGATCACCCAGTGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: WHPLPREPSCGSSAH*LAPRPGGDHPVAVA
Trigger: AGCCACTGCCACTGGGTGATCTCCCCCAGGCCTCGGTGCAAGGCAGTGAGCTGAACTACCACAGGAAGGCTCTCTTGGCAAAGGATGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp CGATCACTTGTGTGGCCTGAGTTTCTGGTGCCTTCAGGGACTCCCTaGCCAGCCTCACAGCTGGGATGCAAGTCTCTGTCCTCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: RSLVWPEFLVPSGTP*PASQLGCKSLSSLD
Trigger: GTCCAGGGAGGACAGAGACTTGCATCCCAGCTGTGAGGCTGGGCAGGGAGTCCCTGAAGGCACCAGAAACTCAGGCCACACAAGTGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp GCCGTCCACTCCCTACATCCTCCAGAGAACCAGCCTCCGCCTGCCTaGCATCCTTTGCCAAGAGAGCCTTCCTGTGGTAGTTCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: AVHSLHPPENQPPPA*HPLPREPSCGSSAH
Trigger: GTGAGCTGAACTACCACAGGAAGGCTCTCTTGGCAAAGGATGCCAGGCAGGCGGAGGCTGGTTCTCTGGAGGATGTAGGGAGTGGACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp TGGTTTTGCAGCAGTGTAGCAGGCATGCTGGATGCTCTCAACAGCTaGGGCCGTCCACTCCCTACATCCTCCAGAGAACCAGCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: WFCSSVAGMLDALNS*GRPLPTSSREPASA
Trigger: GGCGGAGGCTGGTTCTCTGGAGGATGTAGGGAGTGGACGGCCCCAGCTGTTGAGAGCATCCAGCATGCCTGCTACACTGCTGCAAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp GACACTCTGGACTGCGGAGGAAGGACCTGGCTGAGAGAGGTGACTTaGAGCCTTGAGGTCACCTTCTTCTGGTTCAGCCCCCTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: DTLDCGGRTWLREVT*SLEVTFFWFSPLPD
Trigger: GTCTGGGAGGGGGCTGAACCAGAAGAAGGTGACCTCAAGGCTTCAAGTCACCTCTCTCAGCCAGGTCCTTCCTCCGCAGTCCAGAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp CCCTACATCCTCCAGAGAACCAGCCTCCGCCTGCCTGGCATCCTTTaGCAAGAGAGCCTTCCTGTGGTAGTTCAGCTCACTGCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: PYILQRTSLRLPGIL*QESLPVVVQLTALH
Trigger: GTGCAAGGCAGTGAGCTGAACTACCACAGGAAGGCTCTCTTGGCAAAGGATGCCAGGCAGGCGGAGGCTGGTTCTCTGGAGGATGTAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp GAGACACTTCCTCCCCACGATCACTTGTGTGGCCTGAGTTTCTGGTaGCTTCAGGGACTCCCTGCCCAGCCTCACAGCTGGGATGCAAGT +
Preference number: 5 (lower is better)
Translates to: ETLPPHDHLCGLSFW*LQGLPAQPHSWDAS
Trigger: ACTTGCATCCCAGCTGTGAGGCTGGGCAGGGAGTCCCTGAAGGCACCAGAAACTCAGGCCACACAAGTGATCGTGGGGAGGAAGTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp AGAAGTGTGGAAGGGCCTGAGGTCAGGCTGGGCTCTTCGGGGACCTaGTTTTGCAGCAGTGTAGCAGGCATGCTGGATGCTCTCAACAGC +
Preference number: 5 (lower is better)
Translates to: RSVEGPEVRLGSSGT*FCSSVAGMLDALNS
Trigger: GCTGTTGAGAGCATCCAGCATGCCTGCTACACTGCTGCAAAACCAGGTCCCCGAAGAGCCCAGCCTGACCTCAGGCCCTTCCACACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp GAATCTTCTTCACATACTGCCCGATTGTGGCATCTTGTGGGGAACTaGCTGGCCTTCCTGGACGCTCTGCTCCGGGGAGCTCTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ESSSHTARLWHLVGN*LAFLDALLRGALRW
Trigger: CCACCTCAGAGCTCCCCGGAGCAGAGCGTCCAGGAAGGCCAGCCAGTTCCCCACAAGATGCCACAATCGGGCAGTATGTGAAGAAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp CCGGATCCCAATGCTCCTCACATCCACTTCTATGGGTGGAGGGGGTaGGATCTCGCTGATGCTCAGCTCGATTTCGTCCAGGGAGAGATC +
Preference number: 5 (lower is better)
Translates to: PDPNAPHIHFYGWRG*DLADAQLDFVQGEI
Trigger: GATCTCTCCCTGGACGAAATCGAGCTGAGCATCAGCGAGATCCCACCCCCTCCACCCATAGAAGTGGATGTGAGGAGCATTGGGATCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp CTCCGTTACCCGGATCCCAATGCTCCTCACATCCACTTCTATGGGTaGAGGGGGTGGGATCTCGCTGATGCTCAGCTCGATTTCGTCCAG +
Preference number: 5 (lower is better)
Translates to: LRYPDPNAPHIHFYG*RGWDLADAQLDFVQ
Trigger: CTGGACGAAATCGAGCTGAGCATCAGCGAGATCCCACCCCCTCCACCCATAGAAGTGGATGTGAGGAGCATTGGGATCCGGGTAACGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp TGTCCTCAAGGGCCAGGACCTGATTCTTCAGGCTGGAGATACTGCTaGTATCAGTCTCCAGCAGGCCCAGGCTTTCCTCCGTTACCCGGA +
Preference number: 5 (lower is better)
Translates to: CPQGPGPDSSGWRYC*YQSPAGPGFPPLPG
Trigger: TCCGGGTAACGGAGGAAAGCCTGGGCCTGCTGGAGACTGATACCAGCAGTATCTCCAGCCTGAAGAATCAGGTCCTGGCCCTTGAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp CCCCTCGGGTACTTAGAAGTGTCACACCCTGGCACTGACATCACTGGGCTTAGTGTGCGGTCCCCACTGTaGGGAAGGCTGAAGTTTCGG +
Preference number: 5 (lower is better)
Translates to: PLGYLEVSHPGTDITGLSVRSPL*GRLKFR
Trigger: CCGAAACTTCAGCCTTCCCAACAGTGGGGACCGCAC...ACTAAGCCCAGTGATGTCAGTGCCAGGGTGTGACACTTCTAAGTACCCGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp CCTGGCAGCTCAGTAGTGCTTGGACCATGTCCTCCCGGTCGTGGCTaGCTCCTAACATCAGTGCAGTCTGTCCTCCCTGAGTTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: PGSSVVLGPCPPGRG*LLTSVQSVLPELLV
Trigger: TACAAGCAACTCAGGGAGGACAGACTGCACTGATGTTAGGAGTCAGCCACGACCGGGAGGACATGGTCCAAGCACTACTGAGCTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp GAAGCCTTGAGGTCACCTTCTTCTGGTTCAGCCCCCTCCCAGACCTaGTCTGGAATTGCTGGCTCTAGTTCCCCCAACTCCCTGTCTACT +
Preference number: 5 (lower is better)
Translates to: EALRSPSSGSAPSQT*SGIAGSSSPNSLST
Trigger: AGTAGACAGGGAGTTGGGGGAACTAGAGCCAGCAATTCCAGAGCAGGTCTGGGAGGGGGCTGAACCAGAAGAAGGTGACCTCAAGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp CTTTGCCTCAGGAGCTGCTTGGTGGTATCCCCAGTTTCCGGCAGGTaGTGGCTCAGTGTCTGGCACGCGTTAAGAAATTCCTCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: LCLRSCLVVSPVSGR*WLSVWHALRNSSEG
Trigger: ACCCTCAGAGGAATTTCTTAACGCGTGCCAGACACTGAGCCAGCACCTGCCGGAAACTGGGGATACCACCAAGCAGCTCCTGAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp GGCGTGGCGGAGCCAGGCGTTAACACCAGCTCTGCTTCTCTCATGTaGTGCTCAATTTCCACTTCCTCTAGATCCATGGGGACACTCTGG +
Preference number: 5 (lower is better)
Translates to: GVAEPGVNTSSASLM*CSISTSSRSMGTLW
Trigger: CCAGAGTGTCCCCATGGATCTAGAGGAAGTGGAAATTGAGCACCACATGAGAGAAGCAGAGCTGGTGTTAACGCCTGGCTCCGCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp AAGCTCTTGAATCTTCTTCACATACTGCCCGATTGTGGCATCTTGTaGGGAACTGGCTGGCCTTCCTGGACGCTCTGCTCCGGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: KLLNLLHILPDCGIL*GTGWPSWTLCSGEL
Trigger: GAGCTCCCCGGAGCAGAGCGTCCAGGAAGGCCAGCCAGTTCCCCACAAGATGCCACAATCGGGCAGTATGTGAAGAAGATTCAAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp CTCCCTGCCCAGCCTCACAGCTGGGATGCAAGTCTCTGTCCTCCCTaGACTCTGAGCAATCCTGTTTCTTCTCGGTCTCACTGTCAGACA +
Preference number: 5 (lower is better)
Translates to: LPAQPHSWDASLCPP*TLSNPVSSRSHCQT
Trigger: TGTCTGACAGTGAGACCGAGAAGAAACAGGATTGCTCAGAGTCCAGGGAGGACAGAGACTTGCATCCCAGCTGTGAGGCTGGGCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp TGCCTCAGGAGCTGCTTGGTGGTATCCCCAGTTTCCGGCAGGTGCTaGCTCAGTGTCTGGCACGCGTTAAGAAATTCCTCTGAGGGTTTA +
Preference number: 5 (lower is better)
Translates to: CLRSCLVVSPVSGRC*LSVWHALRNSSEGL
Trigger: TAAACCCTCAGAGGAATTTCTTAACGCGTGCCAGACACTGAGCCAGCACCTGCCGGAAACTGGGGATACCACCAAGCAGCTCCTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp CCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTAGTTCTCCCCGACAATTaGTCCTCAAGGGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: PGRDVSPEKALSYPGWLLVLPDN*SSRART
Trigger: GGTCCTGGCCCTTGAGGACAAATTGTCGGGGAGAAC...TAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp TTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACTGCAAATCAGTCAGGCTGCTGTaGCAGGCTGGGTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: FLLCKGALTYLLATQDCKSVRLL*QAGCAR
Trigger: CCTGGCACACCCAGCCTGCAACAGCAGCCTGACTGA...TTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp AGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTACTGCAGGCTGTTCGGCCAGCCTaGTCAGTCAGGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RDVSPEKALSYPGWLLLQAVRPA*SVRLLL
Trigger: CAACAGCAGCCTGACTGACAAGGCTGGCCGAACAGC...CTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp TTCACCGTGGCATCAGTCCTGTCCGGAGCCTCGCTGGCCCTCTCTTaGCTAAGCTTTTCTTCTAAATGGGCTACAGTGCACTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: FTVASVLSGASLALS*LSFSSKWATVHSSS
Trigger: AGAGCTGGAGTGCACTGTAGCCCATTTAGAAGAAAAGCTTAGTCAAGAGAGGGCCAGCGAGGCTCCGGACAGGACTGATGCCACGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp CGGCAGGTGCTGGCTCAGTGTCTGGCACGCGTTAAGAAATTCCTCTaGGGGTTTATATCTCTCAGCCCTCAGATGAGACACTTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RQVLAQCLARVKKFL*GFISLSPQMRHFLP
Trigger: GGGGAGGAAGTGTCTCATCTGAGGGCTGAGAGATATAAACCCTCAGAGGAATTTCTTAACGCGTGCCAGACACTGAGCCAGCACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp GTGGCGGAGCCAGGCGTTAACACCAGCTCTGCTTCTCTCATGTGGTaGTCAATTTCCACTTCCTCTAGATCCATGGGGACACTCTGGACT +
Preference number: 5 (lower is better)
Translates to: VAEPGVNTSSASLMW*SISTSSRSMGTLWT
Trigger: AGTCCAGAGTGTCCCCATGGATCTAGAGGAAGTGGAAATTGAGCACCACATGAGAGAAGCAGAGCTGGTGTTAACGCCTGGCTCCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 90 bp CTGCTTCTCTCATGTGGTGCTCAATTTCCACTTCCTCTAGATCCATaGGGACACTCTGGACTGCGGAGGAAGGACCTGGCTGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: LLLSCGAQFPLPLDP*GHSGLRRKDLAERG
Trigger: ACCTCTCTCAGCCAGGTCCTTCCTCCGCAGTCCAGAGTGTCCCCATGGATCTAGAGGAAGTGGAAATTGAGCACCACATGAGAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp AGCTCTTCTGTTCTCCCCGACAATTTGTCCTCAAGGGCCAGGACCTaGTTCTTCAGGCTGGAGATACTGCTGGTATCAGTCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SSSVLPDNLSSRART*FFRLEILLVSVSSR
Trigger: CCTGCTGGAGACTGATACCAGCAGTATCTCCAGCCTGAAGAATCAGGTCCTGGCCCTTGAGGACAAATTGTCGGGGAGAACAGAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp CCTGGGAGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTACACAGGAGACCAGTTTaGCTGGGGAGGAACAGCATA +
Preference number: 5 (lower is better)
Translates to: PGRDVSPEKALSYPGWLLHRRPV*LGRNSI
Trigger: TATGCTGTTCCTCCCCAGCAAAACTGGTCTCCTGTG...TAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp ATTGCTTTTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGATGGATGCTGCTGAGCTaGGAGGCGGGCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: IAFSIVQGCPDLPACYTGWMLLS*EAGCLM
Trigger: CATCAAGCAGCCCGCCTCCAAGCTCAGCAGCATCCA...TCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 90 bp CTGTTGGGAAGGCTGAAGTTTCGGGGCAGAGTACTAAACTTAGCCTaGTTGGCTCGTCTGTGGATCGGAATCCTTTTGATGGTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LLGRLKFRGRVLNLA*LARLWIGILLMVCP
Trigger: GGGACACACCATCAAAAGGATTCCGATCCACAGACGAGCCAAGCAGGCTAAGTTTAGTACTCTGCCCCGAAACTTCAGCCTTCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp TTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACTGCAAACTCTGTTCCCTAGCCTaGGTCTCTTCTTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FLLCKGALTYLLATQDCKLCSLA*VSSSCC
Trigger: GCAGCAGGAAGAAGAGACCAAGGCTAGGGAACAGAG...TTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp TACCCACAAAAGCTTTGTGACTTAGCAGAGGGGTACCAAACAAATAGGCACCCCAGACCTGCTCTGGAATaGCTGGCTCTAGTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: YPQKLCDLAEGYQTNRHPRPALE*LALVPP
Trigger: TGGGGGAACTAGAGCCAGCAATTCCAGAGCAGGTCT...GGGGTGCCTATTTGTTTGGTACCCCTCTGCTAAGTCACAAAGCTTTTGTGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp CATAACAAGATCCCTGGGGCTGGATACACATTAACCTTTGTAAAGCATGGAGCTTCTGCTCAGGTCCCCTaGGCAGTGACAGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: HNKIPGAGYTLTFVKHGASAQVP*AVTVGV
Trigger: CACCCCAACTGTCACTGCCAAGGGGACCTGAGCAGA...AGCTCCATGCTTTACAAAGGTTAATGTGTATCCAGCCCCAGGGATCTTGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp CCAGTTAGACACACAGAAACTCAGGCCTCCTTTCAGACCTGCTGCATAACAAGACGGGAGCAGATTCTCTaGTGCTCCAGGAAGACTCTC +
Preference number: 5 (lower is better)
Translates to: PVRHTETQASFQTCCITRREQIL*CSRKTL
Trigger: GAGAGTCTTCCTGGAGCACAAGAGAATCTGCTCCCG...TCTTGTTATGCAGCAGGTCTGAAAGGAGGCCTGAGTTTCTGTGTGTCTAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp AGAGATGTCAGTCCAGAGAAAGCTCTATCTTACCCTGGCTGGCTGCTACTGCAGGATGGTATTCAAGCTTaGCCTCAGGAGCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: RDVSPEKALSYPGWLLLQDGIQA*PQELLG
Trigger: ACCAAGCAGCTCCTGAGGCAAAGCTTGAATACCATC...CTGCAGTAGCAGCCAGCCAGGGTAAGATAGAGCTTTCTCTGGACTGACATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp CCAGTTAGACACACAGAAACTCAGGCCTCCTTTCAGACCTGCTGCATAACAAGATCATTGTCCTGCAGGTaGACATCTGCCTGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: PVRHTETQASFQTCCITRSLSCR*TSAWQL
Trigger: GAGCTGCCAGGCAGATGTCAACCTGCAGGACAATGA...TCTTGTTATGCAGCAGGTCTGAAAGGAGGCCTGAGTTTCTGTGTGTCTAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp TACCCACAAAAGCTTTGTGACTTAGCAGAGGGGTACCAAACAAATAGGCACCCCAGTGCACTCCAGCTCTaGAATCCTCTGTTCCCTAGC +
Preference number: 5 (lower is better)
Translates to: YPQKLCDLAEGYQTNRHPSALQL*NPLFPS
Trigger: GCTAGGGAACAGAGGATTCAAGAGCTGGAGTGCACT...GGGGTGCCTATTTGTTTGGTACCCCTCTGCTAAGTCACAAAGCTTTTGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp TACCCACAAAAGCTTTGTGACTTAGCAGAGGGGTACCAAACAAATAGGCACCCCAAGGGAACTGAGCAGTaGGTTCTGGATGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: YPQKLCDLAEGYQTNRHPKGTEQ*VLDAAE
Trigger: CTCAGCAGCATCCAGAACCAACTGCTCAGTTCCCTT...GGGGTGCCTATTTGTTTGGTACCCCTCTGCTAAGTCACAAAGCTTTTGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp GCGTTAAGAAATTCCTCTGAGGGTTTATATCTCTCAGCCCTCAGATaGGACACTTCCTCCCCACGATCACTTGTGTGGCCTGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: ALRNSSEGLYLSALR*DTSSPRSLVWPEFL
Trigger: CAGAAACTCAGGCCACACAAGTGATCGTGGGGAGGAAGTGTCTCATCTGAGGGCTGAGAGATATAAACCCTCAGAGGAATTTCTTAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp AGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGGAGGTTCAGCTCACTGCCTaGCACCGAGGCCTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: SLSGLSRFQNFYKLFLMEVQLTA*HRGLGE
Trigger: CTCCCCCAGGCCTCGGTGCAAGGCAGTGAGCTGAAC...CTCCATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp GAAGACGTTTTGAATTTCTGGATGACTCCACTGCAGCCTGCACTCTGCACCCCATTGCTTGTGATTATTTaGGACCCATGGGAAGCCGTT +
Preference number: 5 (lower is better)
Translates to: EDVLNFWMTPLQPALCTPLLVII*DPWEAV
Trigger: AACGGCTTCCCATGGGTCCAAAATAATCACAAGCAA...TGGGGTGCAGAGTGCAGGCTGCAGTGGAGTCATCCAGAAATTCAAAACGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp TTTCTATTGTGCAAGGGTGCCCTGACCTACCTGCTTGCTACACAGGACTGCAAATCTGTCCTCCCTGAGTaGCTTGTATGTTCACATTCC +
Preference number: 5 (lower is better)
Translates to: FLLCKGALTYLLATQDCKSVLPE*LVCSHS
Trigger: GGAATGTGAACATACAAGCAACTCAGGGAGGACAGA...TTTGCAGTCCTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp GTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTATGCAGGTCGGCGTTGCCTaGGTGACAGGCCAGCATGAG +
Preference number: 5 (lower is better)
Translates to: VSLSGLSRFQNFYKLFLMQVGVA*VTGQHE
Trigger: CTCATGCTGGCCTGTCACCAAGGCAACGCCGACCTG...CATAAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 90 bp AGACAACAGCCATGTCTTCTTTTGTCTCAGCAGAAGCCAAGGGAGTaGTCATCACAGCAGTGTAGCCAGCTTTGTTCTGATGATCCACAT +
Preference number: 5 (lower is better)
Translates to: RQQPCLLLSQQKPRE*SSQQCSQLCSDDPH
Trigger: ATGTGGATCATCAGAACAAAGCTGGCTACACTGCTGTGATGATCACTCCCTTGGCTTCTGCTGAGACAAAAGAAGACATGGCTGTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp TTAACCATTTGTTTTCTGCTTACTTCCATAGAAGGAATGGAGCCCCTCGGGTACCAGCCATGTCTTCTTTaGTCTCAGCAGAAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LTICFLLTSIEGMEPLGYQPCLL*SQQKPR
Trigger: CCTTGGCTTCTGCTGAGACAAAAGAAGACATGGCTG...GTACCCGAGGGGCTCCATTCCTTCTATGGAAGTAAGCAGAAAACAAATGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp GAAGTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTTTCGGGGACCTGGTTTaGCAGCAGTGTAGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: EVSLSGLSRFQNFYKLFLFGDLV*QQCSRH
Trigger: ATGCCTGCTACACTGCTGCAAAACCAGGTCCCCGAA...AAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp AGAGGCAACATTTTAATTTATAAACAAAAAGGACAGGCCGGAGCTGTGCTGCTCAGTAAGGGTAGCTCTTaGGAGGCTCTTTCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: RGNILIYKQKGQAGAVLLSKGSS*EALSLH
Trigger: ATGAAGAGAAAGAGCCTCCAAAGAGCTACCCTTACT...GAGCAGCACAGCTCCGGCCTGTCCTTTTTGTTTATAAATTAAAATGTTGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp AGAGGCAACATTTTAATTTATAAACAAAAAGGACAGGCCGGAGCTGTGCTGCTCGGAGTGTTCAGCAGATaGACCCCAATGTTCTTATCA +
Preference number: 5 (lower is better)
Translates to: RGNILIYKQKGQAGAVLLGVFSR*TPMFLS
Trigger: TGATAAGAACATTGGGGTCAATCTGCTGAACACTCC...GAGCAGCACAGCTCCGGCCTGTCCTTTTTGTTTATAAATTAAAATGTTGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp GAAGTCAGCCTTTCTGGGTTATCCAGATTCCAAAACTTTTATAAGCTGTTTCTTTCACATACTGCCCGATaGTGGCATCTTGTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: EVSLSGLSRFQNFYKLFLSHTAR*WHLVGN
Trigger: GTTCCCCACAAGATGCCACAATCGGGCAGTATGTGA...AAGAAACAGCTTATAAAAGTTTTGGAATCTGGATAACCCAGAAAGGCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp TTTGACATTGGAATAAATCCTCTTACAGCATTCTTTAAAGCTCGTCTGTTTTGCGCGGAAGATCCATCATaGTCCTGCAGGTTGACATCT +
Preference number: 5 (lower is better)
Translates to: FDIGINPLTAFFKARLFCAEDPS*SCRLTS
Trigger: AGATGTCAACCTGCAGGACAATGATGGATCTTCCGC...GCAAAACAGACGAGCTTTAAAGAATGCTGTAAGAGGATTTATTCCAATGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS-3UTR CAA 90 bp ACTTTTATAAGCTGTTTCTTATGGAGACTCCCAGAGGTAGGTTGTATACTTGCTTTCATGGAGAAGCTCTaGAATCTTCTTCACATACTG +
Preference number: 5 (lower is better)
Translates to: TFISCFLWRLPEVGCILAFMEKL*NLLHIL
Trigger: CAGTATGTGAAGAAGATTCAAGAGCTTCTCCATGAA...AGCAAGTATACAACCTACCTCTGGGAGTCTCCATAAGAAACAGCTTATAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp CTGCAGCTCCTTCGGCCCCAGGGACCTGCCCGGCTCTaGGTGGGCCCGCAGAAGCTCTGCGATTTCCACGTG +
Preference number: 6 (lower is better)
Translates to: LQLLRPQGPARL*VGPQKLCDFHV
Trigger: CACGTGGAAATCGCAGAGCTTCTGCGGGCCCACTCAGAGCCGGGCAGGTCCCTGGGGCCGAAGGAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp AGCTCCTTCGGCCCCAGGGACCTGCCCGGCTCTGAGTaGGCCCGCAGAAGCTCTGCGATTTCCACGTGGGCA +
Preference number: 6 (lower is better)
Translates to: SSFGPRDLPGSE*ARRSSAISTWA
Trigger: TGCCCACGTGGAAATCGCAGAGCTTCTGCGGGCCCACTCAGAGCCGGGCAGGTCCCTGGGGCCGAAGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp GGCTGGCCTTCCTGGACGCTCTGCTCCGGGGAGCTCTaGGGTGGCCTCCTCCCTGATCACGGGAGCAGATTC +
Preference number: 6 (lower is better)
Translates to: GWPSWTLCSGEL*GGLLPDHGSRF
Trigger: GAATCTGCTCCCGTGATCAGGGAGGAGGCCACCTCAGAGCTCCCCGGAGCAGAGCGTCCAGGAAGGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp TCGGCCAGCCTTGTCAGTCAGGCTGCTGTTGCAGGCTaGGTGTGCCAGGAGCAGTCGTACCAGGTCGGCGTT +
Preference number: 6 (lower is better)
Translates to: SASLVSQAAVAG*VCQEQSYQVGV
Trigger: AACGCCGACCTGGTACGACTGCTCCTGGCACACCCAGCCTGCAACAGCAGCCTGACTGACAAGGCTGGCCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp CCTCCTCTTCAATCCGGAGCTCCATGGAGAGGCAGCTaGACAGGGATGAGGCGAGGATCTGCTCAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: PPLQSGAPWRGS*TGMRRGSAQVP
Trigger: GGGGACCTGAGCAGATCCTCGCCTCATCCCTGTGCAGCTGCCTCTCCATGGAGCTCCGGATTGAAGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 72 bp AGGGAACTGAGCAGTTGGTTCTGGATGCTGCTGAGCTaGGAGGCGGGCTGCTTGATGGCGCTGGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RELSSWFWMLLS*EAGCLMALASS
Trigger: GGAGCTGGCCAGCGCCATCAAGCAGCCCGCCTCCAAGCTCAGCAGCATCCAGAACCAACTGCTCAGTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 72 bp GTGTGCCAGGAGCAGTCGTACCAGGTCGGCGTTGCCTaGGTGACAGGCCAGCATGAGGGCGGAAGATCCATC +
Preference number: 6 (lower is better)
Translates to: VCQEQSYQVGVA*VTGQHEGGRSI
Trigger: GATGGATCTTCCGCCCTCATGCTGGCCTGTCACCAAGGCAACGCCGACCTGGTACGACTGCTCCTGGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp GCCAGGAGCAGTCGTACCAGGTCGGCGTTGCCTTGGTaGCAGGCCAGCATGAGGGCGGAAGATCCATCATTG +
Preference number: 6 (lower is better)
Translates to: ARSSRTRSALPW*QASMRAEDPSL
Trigger: CAATGATGGATCTTCCGCCCTCATGCTGGCCTGTCACCAAGGCAACGCCGACCTGGTACGACTGCTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp GCAGGCCCAGGCTTTCCTCCGTTACCCGGATCCCAATaGTCCTCACATCCACTTCTATGGGTGGAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: AGPGFPPLPGSQ*SSHPLLWVEGV
Trigger: CACCCCCTCCACCCATAGAAGTGGATGTGAGGAGCATTGGGATCCGGGTAACGGAGGAAAGCCTGGGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp GTGTGGCCTGAGTTTCTGGTGCCTTCAGGGACTCCCTaGCCAGCCTCACAGCTGGGATGCAAGTCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: VWPEFLVPSGTP*PASQLGCKSLS
Trigger: GGACAGAGACTTGCATCCCAGCTGTGAGGCTGGGCAGGGAGTCCCTGAAGGCACCAGAAACTCAGGCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp GGGACAAAGCTGTTCGGCCAGCCTTGTCAGTCAGGCTaGTGTTGCAGGCTGGGTGTGCCAGGAGCAGTCGTA +
Preference number: 6 (lower is better)
Translates to: GTKLFGQPCQSG*CCRLGVPGAVV
Trigger: TACGACTGCTCCTGGCACACCCAGCCTGCAACAGCAGCCTGACTGACAAGGCTGGCCGAACAGCTTTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp GGGAGATCACCCAGTGGCAGTGGCTGGGATGGCTCCTaGGTCCCCAGGGATATCTTTCTGGGTACCACAGGA +
Preference number: 6 (lower is better)
Translates to: GRSPSGSGWDGS*VPRDIFLGTTG
Trigger: TCCTGTGGTACCCAGAAAGATATCCCTGGGGACCCAGGAGCCATCCCAGCCACTGCCACTGGGTGATCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp GAAGGGCCTGAGGTCAGGCTGGGCTCTTCGGGGACCTaGTTTTGCAGCAGTGTAGCAGGCATGCTGGATGCT +
Preference number: 6 (lower is better)
Translates to: EGPEVRLGSSGT*FCSSVAGMLDA
Trigger: AGCATCCAGCATGCCTGCTACACTGCTGCAAAACCAGGTCCCCGAAGAGCCCAGCCTGACCTCAGGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp TCACATACTGCCCGATTGTGGCATCTTGTGGGGAACTaGCTGGCCTTCCTGGACGCTCTGCTCCGGGGAGCT +
Preference number: 6 (lower is better)
Translates to: SHTARLWHLVGN*LAFLDALLRGA
Trigger: AGCTCCCCGGAGCAGAGCGTCCAGGAAGGCCAGCCAGTTCCCCACAAGATGCCACAATCGGGCAGTATGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 90 bp ATCCTTTGCCAAGAGAGCCTTCCTGTGGTAGTTCAGCTCACTGCCTaGCACCGAGGCCTGGGGGAGATCACCCAGTGGCAGTGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: ILCQESLPVVVQLTA*HRGLGEITQWQWLG
Trigger: TCCCAGCCACTGCCACTGGGTGATCTCCCCCAGGCCTCGGTGCAAGGCAGTGAGCTGAACTACCACAGGAAGGCTCTCTTGGCAAAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 90 bp GGTCACCTTCTTCTGGTTCAGCCCCCTCCCAGACCTGCTCTGGAATaGCTGGCTCTAGTTCCCCCAACTCCCTGTCTACTGACTGGGCCG +
Preference number: 6 (lower is better)
Translates to: GHLLLVQPPPRPALE*LALVPPTPCLLTGP
Trigger: CGGCCCAGTCAGTAGACAGGGAGTTGGGGGAACTAGAGCCAGCAATTCCAGAGCAGGTCTGGGAGGGGGCTGAACCAGAAGAAGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp GGCCCGCAGAAGCTCTGCGATTTCCACGTGGGCAGGTaGATTCAGAACGAGGGACAAAGCTGTTCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: GPQKLCDFHVGR*IQNEGQSCSAS
Trigger: GCTGGCCGAACAGCTTTGTCCCTCGTTCTGAATTCACCTGCCCACGTGGAAATCGCAGAGCTTCTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp TTGCCAAGAGAGCCTTCCTGTGGTAGTTCAGCTCACTaGCTTGCACCGAGGCCTGGGGGAGATCACCCAGTG +
Preference number: 6 (lower is better)
Translates to: LPREPSCGSSAH*LAPRPGGDHPV
Trigger: CACTGGGTGATCTCCCCCAGGCCTCGGTGCAAGGCAGTGAGCTGAACTACCACAGGAAGGCTCTCTTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp GGGCCAGGACCTGATTCTTCAGGCTGGAGATACTGCTaGTATCAGTCTCCAGCAGGCCCAGGCTTTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GPGPDSSGWRYC*YQSPAGPGFPP
Trigger: CGGAGGAAAGCCTGGGCCTGCTGGAGACTGATACCAGCAGTATCTCCAGCCTGAAGAATCAGGTCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 72 bp CCTCCAGAGAACCAGCCTCCGCCTGCCTGGCATCCTTaGCCAAGAGAGCCTTCCTGTGGTAGTTCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: PPENQPPPAWHP*PREPSCGSSAH
Trigger: GTGAGCTGAACTACCACAGGAAGGCTCTCTTGGCAAAGGATGCCAGGCAGGCGGAGGCTGGTTCTCTGGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 90 bp TCCCTACATCCTCCAGAGAACCAGCCTCCGCCTGCCTGGCATCCTTaGCCAAGAGAGCCTTCCTGTGGTAGTTCAGCTCACTGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: SLHPPENQPPPAWHP*PREPSCGSSAHCLA
Trigger: TGCAAGGCAGTGAGCTGAACTACCACAGGAAGGCTCTCTTGGCAAAGGATGCCAGGCAGGCGGAGGCTGGTTCTCTGGAGGATGTAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp GACTGCGGAGGAAGGACCTGGCTGAGAGAGGTGACTTaGAGCCTTGAGGTCACCTTCTTCTGGTTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: DCGGRTWLREVT*SLEVTFFWFSP
Trigger: GGGGCTGAACCAGAAGAAGGTGACCTCAAGGCTTCAAGTCACCTCTCTCAGCCAGGTCCTTCCTCCGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp GACCTGGTTTTGCAGCAGTGTAGCAGGCATGCTGGATaGTCTCAACAGCTGGGGCCGTCCACTCCCTACATC +
Preference number: 6 (lower is better)
Translates to: DLVLQQCSRHAG*SQQLGPSTPYI
Trigger: GATGTAGGGAGTGGACGGCCCCAGCTGTTGAGAGCATCCAGCATGCCTGCTACACTGCTGCAAAACCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp AGGTCACCTTCTTCTGGTTCAGCCCCCTCCCAGACCTaGTCTGGAATTGCTGGCTCTAGTTCCCCCAACTCC +
Preference number: 6 (lower is better)
Translates to: RSPSSGSAPSQT*SGIAGSSSPNS
Trigger: GGAGTTGGGGGAACTAGAGCCAGCAATTCCAGAGCAGGTCTGGGAGGGGGCTGAACCAGAAGAAGGTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp CCGGATCCCAATGCTCCTCACATCCACTTCTATGGGTaGAGGGGGTGGGATCTCGCTGATGCTCAGCTCGAT +
Preference number: 6 (lower is better)
Translates to: PDPNAPHIHFYG*RGWDLADAQLD
Trigger: ATCGAGCTGAGCATCAGCGAGATCCCACCCCCTCCACCCATAGAAGTGGATGTGAGGAGCATTGGGATCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 72 bp CTTCTGGTTCAGCCCCCTCCCAGACCTGCTCTGGAATaGCTGGCTCTAGTTCCCCCAACTCCCTGTCTACTG +
Preference number: 6 (lower is better)
Translates to: LLVQPPPRPALE*LALVPPTPCLL
Trigger: CAGTAGACAGGGAGTTGGGGGAACTAGAGCCAGCAATTCCAGAGCAGGTCTGGGAGGGGGCTGAACCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp AGGAAGGACCTGGCTGAGAGAGGTGACTTGAAGCCTTaGGGTCACCTTCTTCTGGTTCAGCCCCCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: RKDLAERGDLKP*GHLLLVQPPPR
Trigger: TCTGGGAGGGGGCTGAACCAGAAGAAGGTGACCTCAAGGCTTCAAGTCACCTCTCTCAGCCAGGTCCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp AGGAGCTGCTTGGTGGTATCCCCAGTTTCCGGCAGGTaGTGGCTCAGTGTCTGGCACGCGTTAAGAAATTCC +
Preference number: 6 (lower is better)
Translates to: RSCLVVSPVSGR*WLSVWHALRNS
Trigger: GGAATTTCTTAACGCGTGCCAGACACTGAGCCAGCACCTGCCGGAAACTGGGGATACCACCAAGCAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp GTGCCCGGCATTCAGGATCCGGAGTGTTCAGCAGATTaGCCCCAATGTTCTTATCATGGGACTCTCGGGGAG +
Preference number: 6 (lower is better)
Translates to: VPGIQDPECSAD*PQCSYHGTLGE
Trigger: CTCCCCGAGAGTCCCATGATAAGAACATTGGGGTCAATCTGCTGAACACTCCGGATCCTGAATGCCGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp CAGCCTCACAGCTGGGATGCAAGTCTCTGTCCTCCCTaGACTCTGAGCAATCCTGTTTCTTCTCGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: QPHSWDASLCPP*TLSNPVSSRSH
Trigger: GTGAGACCGAGAAGAAACAGGATTGCTCAGAGTCCAGGGAGGACAGAGACTTGCATCCCAGCTGTGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp AGCTGCTTGGTGGTATCCCCAGTTTCCGGCAGGTGCTaGCTCAGTGTCTGGCACGCGTTAAGAAATTCCTCT +
Preference number: 6 (lower is better)
Translates to: SCLVVSPVSGRC*LSVWHALRNSS
Trigger: AGAGGAATTTCTTAACGCGTGCCAGACACTGAGCCAGCACCTGCCGGAAACTGGGGATACCACCAAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp TCTGAGTGGGCCCGCAGAAGCTCTGCGATTTCCACGTaGGCAGGTGAATTCAGAACGAGGGACAAAGCTGTT +
Preference number: 6 (lower is better)
Translates to: SEWARRSSAIST*AGEFRTRDKAV
Trigger: AACAGCTTTGTCCCTCGTTCTGAATTCACCTGCCCACGTGGAAATCGCAGAGCTTCTGCGGGCCCACTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 72 bp GGTGCCCGGCATTCAGGATCCGGAGTGTTCAGCAGATaGACCCCAATGTTCTTATCATGGGACTCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: GARHSGSGVFSR*TPMFLSWDSRG
Trigger: TCCCCGAGAGTCCCATGATAAGAACATTGGGGTCAATCTGCTGAACACTCCGGATCCTGAATGCCGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 90 bp CAGCACGGGTTCTTCGGGGCTCGGATAGCTTTGCTTGTGATTATTTaGGACCCATGGGAAGCCGTTCTTTTCTGCTCTTGGTGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: QHGFFGARIALLVII*DPWEAVLFCSWCPA
Trigger: TGCCGGGCACCAAGAGCAGAAAAGAACGGCTTCCCATGGGTCCAAAATAATCACAAGCAAAGCTATCCGAGCCCCGAAGAACCCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp GCATCAGTCCTGTCCGGAGCCTCGCTGGCCCTCTCTTaGCTAAGCTTTTCTTCTAAATGGGCTACAGTGCAC +
Preference number: 6 (lower is better)
Translates to: ASVLSGASLALS*LSFSSKWATVH
Trigger: GTGCACTGTAGCCCATTTAGAAGAAAAGCTTAGTCAAGAGAGGGCCAGCGAGGCTCCGGACAGGACTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS GCA 72 bp TTGGACCCATGGGAAGCCGTTCTTTTCTGCTCTTGGTaGCCGGCATTCAGGATCCGGAGTGTTCAGCAGATT +
Preference number: 6 (lower is better)
Translates to: LDPWEAVLFCSW*PAFRIRSVQQI
Trigger: AATCTGCTGAACACTCCGGATCCTGAATGCCGGGCACCAAGAGCAGAAAAGAACGGCTTCCCATGGGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp TCATGTGGTGCTCAATTTCCACTTCCTCTAGATCCATaGGGACACTCTGGACTGCGGAGGAAGGACCTGGCT +
Preference number: 6 (lower is better)
Translates to: SCGAQFPLPLDP*GHSGLRRKDLA
Trigger: AGCCAGGTCCTTCCTCCGCAGTCCAGAGTGTCCCCATGGATCTAGAGGAAGTGGAAATTGAGCACCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp ATTTGTCCTCAAGGGCCAGGACCTGATTCTTCAGGCTaGAGATACTGCTGGTATCAGTCTCCAGCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: ICPQGPGPDSSG*RYCWYQSPAGP
Trigger: TGGGCCTGCTGGAGACTGATACCAGCAGTATCTCCAGCCTGAAGAATCAGGTCCTGGCCCTTGAGGACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp ATTTTGGACCCATGGGAAGCCGTTCTTTTCTGCTCTTaGTGCCCGGCATTCAGGATCCGGAGTGTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: ILDPWEAVLFCS*CPAFRIRSVQQ
Trigger: CTGCTGAACACTCCGGATCCTGAATGCCGGGCACCAAGAGCAGAAAAGAACGGCTTCCCATGGGTCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp GTTCTCCCCGACAATTTGTCCTCAAGGGCCAGGACCTaGTTCTTCAGGCTGGAGATACTGCTGGTATCAGTC +
Preference number: 6 (lower is better)
Translates to: VLPDNLSSRART*FFRLEILLVSV
Trigger: GACTGATACCAGCAGTATCTCCAGCCTGAAGAATCAGGTCCTGGCCCTTGAGGACAAATTGTCGGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp GAGCCAGGCGTTAACACCAGCTCTGCTTCTCTCATGTaGTGCTCAATTTCCACTTCCTCTAGATCCATGGGG +
Preference number: 6 (lower is better)
Translates to: EPGVNTSSASLM*CSISTSSRSMG
Trigger: CCCCATGGATCTAGAGGAAGTGGAAATTGAGCACCACATGAGAGAAGCAGAGCTGGTGTTAACGCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 72 bp TATTTTGGACCCATGGGAAGCCGTTCTTTTCTGCTCTaGGTGCCCGGCATTCAGGATCCGGAGTGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: YFGPMGSRSFLL*VPGIQDPECSA
Trigger: TGCTGAACACTCCGGATCCTGAATGCCGGGCACCAAGAGCAGAAAAGAACGGCTTCCCATGGGTCCAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 90 bp CGGGTAGCCATGCTCCAGGCAGTTCCACTGTTCATGGAGAAGCTCTaGAATCTTCTTCACATACTGCCCGATTGTGGCATCTTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: RVAMLQAVPLFMEKL*NLLHILPDCGILWG
Trigger: TCCCCACAAGATGCCACAATCGGGCAGTATGTGAAGAAGATTCAAGAGCTTCTCCATGAACAGTGGAACTGCCTGGAGCATGGCTACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 90 bp TTGGGAAGGCTGAAGTTTCGGGGCAGAGTACTAAACTTAGCCTGCTaGGCTCGTCTGTGGATCGGAATCCTTTTGATGGTGTGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: LGRLKFRGRVLNLAC*ARLWIGILLMVCPF
Trigger: GAAGGGACACACCATCAAAAGGATTCCGATCCACAGACGAGCCAAGCAGGCTAAGTTTAGTACTCTGCCCCGAAACTTCAGCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp CTAGATAACTTCCTGCTGGACACACGGAACCACTCCTaGCTGATGGTATTCAAGCTTTGCCTCAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: LDNFLLDTRNHS*LMVFKLCLRSC
Trigger: GCAGCTCCTGAGGCAAAGCTTGAATACCATCAGTCAGGAGTGGTTCCGTGTGTCCAGCAGGAAGTTATCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp AGTGAAGGGCTGTGTTCCCACTTCGGTCAGCCAGGTTaGCAAGTAGCTTCAGAAGATATGGAGAGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: SEGLCSHFGQPG*QVASEDMESEA
Trigger: AGCCTCACTCTCCATATCTTCTGAAGCTACTTGTCAACCTGGCTGACCGAAGTGGGAACACAGCCCTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp GCTCGGATAGCTTTGCTTGTGATTATTTTGGACCCATaGGAAGCCGTTCTTTTCTGCTCTTGGTGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: ARIALLVIILDP*EAVLFCSWCPA
Trigger: TGCCGGGCACCAAGAGCAGAAAAGAACGGCTTCCCATGGGTCCAAAATAATCACAAGCAAAGCTATCCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp GTATCCCCAGTTTCCGGCAGGTGCTGGCTCAGTGTCTaGCACGCGTTAAGAAATTCCTCTGAGGGTTTATAT +
Preference number: 6 (lower is better)
Translates to: VSPVSGRCWLSV*HALRNSSEGLY
Trigger: ATATAAACCCTCAGAGGAATTTCTTAACGCGTGCCAGACACTGAGCCAGCACCTGCCGGAAACTGGGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp AATTCCTCTGAGGGTTTATATCTCTCAGCCCTCAGATaGGACACTTCCTCCCCACGATCACTTGTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: NSSEGLYLSALR*DTSSPRSLVWP
Trigger: AGGCCACACAAGTGATCGTGGGGAGGAAGTGTCTCATCTGAGGGCTGAGAGATATAAACCCTCAGAGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp CTGGCTCAGTGTCTGGCACGCGTTAAGAAATTCCTCTaGGGGTTTATATCTCTCAGCCCTCAGATGAGACAC +
Preference number: 6 (lower is better)
Translates to: LAQCLARVKKFL*GFISLSPQMRH
Trigger: GTGTCTCATCTGAGGGCTGAGAGATATAAACCCTCAGAGGAATTTCTTAACGCGTGCCAGACACTGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CCA 72 bp GGCAGAGTACTAAACTTAGCCTGCTTGGCTCGTCTGTaGATCGGAATCCTTTTGATGGTGTGTCCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: GRVLNLACLARL*IGILLMVCPFS
Trigger: TGAGAAGGGACACACCATCAAAAGGATTCCGATCCACAGACGAGCCAAGCAGGCTAAGTTTAGTACTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 72 bp CTGAAGTTTCGGGGCAGAGTACTAAACTTAGCCTGCTaGGCTCGTCTGTGGATCGGAATCCTTTTGATGGTG +
Preference number: 6 (lower is better)
Translates to: LKFRGRVLNLAC*ARLWIGILLMV
Trigger: CACCATCAAAAGGATTCCGATCCACAGACGAGCCAAGCAGGCTAAGTTTAGTACTCTGCCCCGAAACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS TCA 72 bp TGCTCCAGGCAGTTCCACTGTTCATGGAGAAGCTCTTaGATCTTCTTCACATACTGCCCGATTGTGGCATCT +
Preference number: 6 (lower is better)
Translates to: CSRQFHCSWRSS*IFFTYCPIVAS
Trigger: AGATGCCACAATCGGGCAGTATGTGAAGAAGATTCAAGAGCTTCTCCATGAACAGTGGAACTGCCTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4
CDS CAA 72 bp TTCTTCGGGGCTCGGATAGCTTTGCTTGTGATTATTTaGGACCCATGGGAAGCCGTTCTTTTCTGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: FFGARIALLVII*DPWEAVLFCSW
Trigger: CCAAGAGCAGAAAAGAACGGCTTCCCATGGGTCCAAAATAATCACAAGCAAAGCTATCCGAGCCCCGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102790.4