RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KANK2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032194

Ensembl transcript IDs: ENSMUST00000034717.7, ENSMUST00000216008.2

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCGTCCTCATCCTGAATGTTGACGTCCGCCTCACAGGCCAGCAATaGTCTCACCACGTCCACCCGCCCGTGGCTGACGGCCAGCATCAG +
Preference number: 1 (lower is better)
Translates to: AVLILNVDVRLTGQQ*SHHVHPPVADGQHQ
Trigger: CTGATGCTGGCCGTCAGCCACGGGCGGGTGGACGTGGTGAGAGCATTGCTGGCCTGTGAGGCGGACGTCAACATTCAGGATGAGGACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR GCA 90 bp CACTTGATGTTCATGCGTGAGTACAGCATAGATGCGATCTCGCTCTaGCCAGCGTCCAGGGCCACCATCAGTGCTGTGCTCCCGTCGCGG +
Preference number: 1 (lower is better)
Translates to: HLMFMREYSIDAISL*PASRATISAVLPSR
Trigger: CCGCGACGGGAGCACAGCACTGATGGTGGCCCTGGACGCTGGGCAGAGCGAGATCGCATCTATGCTGTACTCACGCATGAACATCAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR GCA 90 bp ACACTGAGATCCTGGGGCCAGAAAGGAACCCCAGTTAGAGAAAGGTaGAGCCTGTCTGTCTCTCCTGTCACCAGCAGGAGCTCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: TLRSWGQKGTPVRER*SLSVSPVTSRSSRA
Trigger: TGCCCTGGAGCTCCTGCTGGTGACAGGAGAGACAGACAGGCTGCACCTTTCTCTAACTGGGGTTCCTTTCTGGCCCCAGGATCTCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR TCA 90 bp AACTGGTGCCAACTGGGAGGAGAATGTAGCTTGGCTTTCTGGCTTTaGACCCAGGGTGCTGGGAAAGGCTTCCAGGAGCTTGAGCCTGGT +
Preference number: 1 (lower is better)
Translates to: NWCQLGGECSLAFWL*TQGAGKGFQELEPG
Trigger: ACCAGGCTCAAGCTCCTGGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CCA 90 bp CACTTTCCTTTAGTCCATGAGTCTCAATGCTGCCCTGCTGAGGTTTaGCGCCAAGGCCCAGTGGGTTCAGCTGTGATCTGGATACGACAG +
Preference number: 1 (lower is better)
Translates to: HFPLVHESQCCPAEV*RQGPVGSAVIWIRQ
Trigger: CTGTCGTATCCAGATCACAGCTGAACCCACTGGGCCTTGGCGCCAAACCTCAGCAGGGCAGCATTGAGACTCATGGACTAAAGGAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 90 bp GTAGAAAGAAAACTGGAGTATAGCGGGAAGGAGAGGAGAGACTGGTaGGTGTTTGGCCCTGGTGGCCCCGACAGAGAAACAGAAAGCAGC +
Preference number: 1 (lower is better)
Translates to: VERKLEYSGKERRDW*VFGPGGPDRETESS
Trigger: GCTGCTTTCTGTTTCTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGCTATACTCCAGTTTTCTTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 90 bp AGAGTAGAAAGAAAACTGGAGTATAGCGGGAAGGAGAGGAGAGACTaGTGGGTGTTTGGCCCTGGTGGCCCCGACAGAGAAACAGAAAGC +
Preference number: 1 (lower is better)
Translates to: RVERKLEYSGKERRD*WVFGPGGPDRETES
Trigger: GCTTTCTGTTTCTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGCTATACTCCAGTTTTCTTTCTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR GCA 90 bp CTTTGGGTCATAGCTGATGCTTCCAGAACCTTAAATAAACTCCCTTaGTGGCTACAAGGCTGGAACTCAGGGCTCAGCTCAGAGCACGAC +
Preference number: 1 (lower is better)
Translates to: LWVIADASRTLNKLP*WLQGWNSGLSSEHD
Trigger: GTCGTGCTCTGAGCTGAGCCCTGAGTTCCAGCCTTGTAGCCAGCAAGGGAGTTTATTTAAGGTTCTGGAAGCATCAGCTATGACCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 90 bp TGGGTCATAGCTGATGCTTCCAGAACCTTAAATAAACTCCCTTGCTaGCTACAAGGCTGGAACTCAGGGCTCAGCTCAGAGCACGACCTT +
Preference number: 1 (lower is better)
Translates to: WVIADASRTLNKLPC*LQGWNSGLSSEHDL
Trigger: AAGGTCGTGCTCTGAGCTGAGCCCTGAGTTCCAGCCTTGTAGCCAGCAAGGGAGTTTATTTAAGGTTCTGGAAGCATCAGCTATGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 90 bp AGCAGCAGCGACAGAAACAGGGGCTTTTCTGAGGAGCGTGTGCTTTaGGTCATAGCTGATGCTTCCAGAACCTTAAATAAACTCCCTTGC +
Preference number: 1 (lower is better)
Translates to: SSSDRNRGFSEERVL*VIADASRTLNKLPC
Trigger: GCAAGGGAGTTTATTTAAGGTTCTGGAAGCATCAGCTATGACCCAAAGCACACGCTCCTCAGAAAAGCCCCTGTTTCTGTCGCTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR GCA 90 bp CCAGCAGCTGTCTGTCCTGAAGTTTGGTTTTCTGTTTCATACACGTaGAAAGACTCCATCATGACATCTACCCACCAGCCAACCCAGTTT +
Preference number: 1 (lower is better)
Translates to: PAAVCPEVWFSVSYT*KDSIMTSTHQPTQF
Trigger: AAACTGGGTTGGCTGGTGGGTAGATGTCATGATGGAGTCTTTGCACGTGTATGAAACAGAAAACCAAACTTCAGGACAGACAGCTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR TCA 90 bp CTGAAGTTTGGTTTTCTGTTTCATACACGTGCAAAGACTCCATCATaGCATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCAT +
Preference number: 1 (lower is better)
Translates to: LKFGFLFHTRAKTPS*HLPTSQPSFSSIAH
Trigger: ATGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATGTCATGATGGAGTCTTTGCACGTGTATGAAACAGAAAACCAAACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR TCA 90 bp TGTCAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGCCACCCGCCCGTGGCTaGCGGCCAGCATCAGGGCCG +
Preference number: 2 (lower is better)
Translates to: CQGSLREVQGLRNAEAEWPPARG*RPASGP
Trigger: CGGCCCTGATGCTGGCCGTCAGCCACGGGCGGGTGG...CCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp CAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACTGCTGTCGGCGATGTTaGCCACGTAGTCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: QGSLREVQGLRNAEAEWDCCRRC*PRSPAA
Trigger: GGCTGCTGGACTACGTGGTCAACATCGCCGACAGCA...GTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR GCA 90 bp ACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCCTCACAGGCCAGCAATaGTCTCACCACGTCCACCCG +
Preference number: 2 (lower is better)
Translates to: TPQALKTQSGGGGQWTRPLTGQQ*SHHVHP
Trigger: CGGGTGGACGTGGTGAGAGCATTGCTGGCCTGTGAG...GGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR GCA 90 bp GGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCTCCCTCAGGGAAGTTCAGCAGGGCCACCATCAGTaGTGTGCTCCCGTCGCGGTC +
Preference number: 2 (lower is better)
Translates to: GFQELEPGRCQGSLREVQQGHHQ*CAPVAV
Trigger: GACCGCGACGGGAGCACAGCACTGATGGTGGCCCTG...CTGAACTTCCCTGAGGGAGCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp ACTCCTCGGCTGAAGACGAAGCCGGACTCTCGTAGTCTGACATGGGAGCGAACGGTGGCTGGTGGGTCCTaGGGGACTCACTGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: TPRLKTKPDSRSLTWERTVAGGS*GTHWLL
Trigger: GAGGAGCCAGTGAGTCCCCCAGGACCCACCAGCCAC...CGTTCGCTCCCATGTCAGACTACGAGAGTCCGGCTTCGTCTTCAGCCGAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp ACAGCTAGGCACAGCCAGCAGGAGCCCGGTGATCTCCTTGTGTCCGTGCTCACATGCGTGGCTTGTGGCTaGTGGGTCCTGGGGGACTCA +
Preference number: 2 (lower is better)
Translates to: TARHSQQEPGDLLVSVLTCVACG*WVLGDS
Trigger: TGAGTCCCCCAGGACCCACCAGCCACAAGCCACGCA...TGTGAGCACGGACACAAGGAGATCACCGGGCTCCTGCTGGCTGTGCCTAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp ACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCGCCGTCTGTCCTGCCTaGCTGGCTTTGGCATTGACA +
Preference number: 2 (lower is better)
Translates to: TPQALKTQSGGGGQWTRPAVCPA*LALALT
Trigger: TGTCAATGCCAAAGCCAGCCAGGCAGGACAGACGGC...GGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp GGTGCCAACTGGGAGGAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGACGTCCACCCGCCCGTaGCTGACGGCCAGCATCAGG +
Preference number: 2 (lower is better)
Translates to: GANWEENVAWLSGFEPRVTSTRP*LTASIR
Trigger: CCTGATGCTGGCCGTCAGCCACGGGCGGGTGGACGT...CACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp ACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCGGAAGAGCTGAAGGATaGTCTCAATGTCGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: TPQALKTQSGGGGQWTRPGRAEG*SQCRPG
Trigger: CCCAGGACGACATTGAGACCATCCTTCAGCTCTTCC...GGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp ACCCAGGGTGCTGGGAAAGGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCTTGGCTTTCTGGCTTTaGACCCAGGGTGCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: TQGAGKGFQELEPGRCQGLAFWL*TQGAGK
Trigger: TTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAA...GCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCCTTTCCCAGCACCCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp CAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACGACAATGAAATGAGGTaGCAAAGGGTGGTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: QGSLREVQGLRNAEAEWDDNEMR*QRVVSR
Trigger: CCTGCTCACCACCCTTTGTCACCTCATTTCATTGTC...GTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp ACTCCTCGGCTGAAGACGAAGCCGGACTCTCGTAGTCTGACATGGGAGCGAACGCCAAGCCGGAAGAGCTaGAGGATGGTCTCAATGTCG +
Preference number: 2 (lower is better)
Translates to: TPRLKTKPDSRSLTWERTPSRKS*RMVSMS
Trigger: CGACATTGAGACCATCCTTCAGCTCTTCCGGCTTGG...CGTTCGCTCCCATGTCAGACTACGAGAGTCCGGCTTCGTCTTCAGCCGAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp ACTCCTCGGCTGAAGACGAAGCCGGACTCTCGTAGTCTGACATGGGAGCGAACGGGCTGGCTTTGGCATTaGCATTCCCAAGCCGGAAGA +
Preference number: 2 (lower is better)
Translates to: TPRLKTKPDSRSLTWERTGWLWH*HSQAGR
Trigger: TCTTCCGGCTTGGGAATGTCAATGCCAAAGCCAGCC...CGTTCGCTCCCATGTCAGACTACGAGAGTCCGGCTTCGTCTTCAGCCGAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp CAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACGGTGAGCAGGCTTTGTaGAGACCTGCTGTAAAGATG +
Preference number: 2 (lower is better)
Translates to: QGSLREVQGLRNAEAEWDGEQAL*RPAVKM
Trigger: CATCTTTACAGCAGGTCTCCACAAAGCCTGCTCACC...GTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp GGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCTATTGTACCCTGAAGACACAGTCTaGAGGTGGAGGGCAGTGGAC +
Preference number: 2 (lower is better)
Translates to: GPEDTVWRWRAVDKTLLYPEDTV*RWRAVD
Trigger: GTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGG...GTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp ACCCAGGGTGCTGGGAAAGGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCACACTGCTTTCTGACTaGAGGCAGGCGGCTAAGGTA +
Preference number: 2 (lower is better)
Translates to: TQGAGKGFQELEPGRCQGTLLSD*RQAAKV
Trigger: TACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGT...GCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCCTTTCCCAGCACCCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CAA 90 bp GAAAACTGGAGTATAGCGGGAAGGAGAGGAGAGACTGGTGGGTGTTaGGCCCTGGTGGCCCCGACAGAGAAACAGAAAGCAGCAGCGACA +
Preference number: 2 (lower is better)
Translates to: ENWSIAGRRGETGGC*ALVAPTEKQKAAAT
Trigger: TGTCGCTGCTGCTTTCTGTTTCTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGCTATACTCCAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR TCA 90 bp ATCACAAGAGACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGTTGGCTTTCTGGCTTTaGACCCAGGGTGCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: ITRDTPGPEDTVWRWRAVLAFWL*TQGAGK
Trigger: TTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAA...CACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGTCTCTTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR GCA 90 bp CAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACGGCTTTGTGGAGACCTaGTGTAAAGATGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: QGSLREVQGLRNAEAEWDGFVET*CKDEET
Trigger: TGTCTCCTCATCTTTACAGCAGGTCTCCACAAAGCC...GTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp ATCACAAGAGACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGTTAGCAACTGAATTCTaGCCCCTCCCATCCCCTAAC +
Preference number: 2 (lower is better)
Translates to: ITRDTPGPEDTVWRWRAVLATEF*PLPSPN
Trigger: GTTAGGGGATGGGAGGGGTCAGAATTCAGTTGCTAA...CACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGTCTCTTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp GGTTCAGCTGTGATCTGGATACGACAGGGAGACTTGAGAGGACAAAGTCCTCCCGACACAGTCTGGAGGTaGAGGGCAGTGGACAAGACC +
Preference number: 2 (lower is better)
Translates to: GSAVIWIRQGDLRGQSPPDTVWR*RAVDKT
Trigger: GGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTC...GGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTATCCAGATCACAGCTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CCA 90 bp GGTTCAGCTGTGATCTGGATACGACAGGGAGACTTGAGAGGACAAAGTCCTCCCCCTGAAGACACAGTCTaGAGGTGGAGGGCAGTGGAC +
Preference number: 2 (lower is better)
Translates to: GSAVIWIRQGDLRGQSPPPEDTV*RWRAVD
Trigger: GTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGG...GGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTATCCAGATCACAGCTGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR TCA 90 bp GACTCCATCATGACATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCACCCCACGAACCACACTaGGATCCTGGGGCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: DSIMTSTHQPTQFLIHCSPHEPH*DPGARK
Trigger: CTTTCTGGCCCCAGGATCTCAGTGTGGTTCGTGGGG...TGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATGTCATGATGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CCA 90 bp ATCACAAGAGACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGAGGAGAATGTAGCTTaGCTTTCTGGCTTTGAACCC +
Preference number: 2 (lower is better)
Translates to: ITRDTPGPEDTVWRWRAVEENVA*LSGFEP
Trigger: GGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTC...CACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGTCTCTTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR GCA 90 bp ACTCCTCGGCTGAAGACGAAGCCGGACTCTCGTAGTCTGACATGGGAGCGAACGTCCTCCTCCCATAATTaGCGGCTGATTGTTCTCTAT +
Preference number: 2 (lower is better)
Translates to: TPRLKTKPDSRSLTWERTSSSHN*RLIVLY
Trigger: ATAGAGAACAATCAGCCGGCAATTATGGGAGGAGGA...CGTTCGCTCCCATGTCAGACTACGAGAGTCCGGCTTCGTCTTCAGCCGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp CACCAGCAGCTGTCTGTCCTGAAGTTTGGTTTTCTGTTTCATACACGTGCAAAGTGCCCTGCTGAGGTTTaGCGCCAAGGCCCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: HQQLSVLKFGFLFHTRAKCPAEV*RQGPVG
Trigger: ACCCACTGGGCCTTGGCGCCAAACCTCAGCAGGGCA...CTTTGCACGTGTATGAAACAGAAAACCAAACTTCAGGACAGACAGCTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR TCA 90 bp GCTAAGGTACGGCAATCTTATTCTGTAAAGCAATCACAAGAGACACCCCAGGCCGTCGCGGTCAGTGAGTaGGATGTCACAGCTAGGCAC +
Preference number: 2 (lower is better)
Translates to: AKVRQSYSVKQSQETPQAVAVSE*DVTARH
Trigger: GTGCCTAGCTGTGACATCTCACTCACTGACCGCGAC...GGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR GCA 90 bp AATGAGGTGACAAAGGGTGGTGAGCAGGCTTTGTGGAGACCTGCTGTAAAGATGGCTTTGAACCCAGGGTaGTGGGAAAGGCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: NEVTKGGEQALWRPAVKMALNPG*WERLPG
Trigger: TCCTGGAAGCCTTTCCCAGCACCCTGGGTTCAAAGC...CATCTTTACAGCAGGTCTCCACAAAGCCTGCTCACCACCCTTTGTCACCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp TCCCATAATTGCCGGCTGATTGTTCTCTATGTTCTTTACAAGAAACCCACACCCTGCGTGGCTTGTGGCTaGTGGGTCCTGGGGGACTCA +
Preference number: 2 (lower is better)
Translates to: SHNCRLIVLYVLYKKPTPCVACG*WVLGDS
Trigger: TGAGTCCCCCAGGACCCACCAGCCACAAGCCACGCA...GGGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAGCCGGCAATTATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR GCA 90 bp GGTTCAGCTGTGATCTGGATACGACAGGGAGACTTGAGAGGACAAAGTCCTCCCACATCAGCTATCAGCTaGAAGATGACAAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: GSAVIWIRQGDLRGQSPPTSAIS*KMTSPV
Trigger: CACAGGGCTTGTCATCTTGCAGCTGATAGCTGATGT...GGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTATCCAGATCACAGCTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR GCA 90 bp CACCAGCAGCTGTCTGTCCTGAAGTTTGGTTTTCTGTTTCATACACGTGCAAAGGCTTTGAACCCAGGGTaGTGGGAAAGGCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: HQQLSVLKFGFLFHTRAKALNPG*WERLPG
Trigger: TCCTGGAAGCCTTTCCCAGCACCCTGGGTTCAAAGC...CTTTGCACGTGTATGAAACAGAAAACCAAACTTCAGGACAGACAGCTGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CCA 90 bp GAAAAGAATACTTCATTTACGTGTAACACTGTCTTCATGGATGTACCGTGGTCAGTGGCTGGTGGGTCCTaGGGGACTCACTGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: EKNTSFTCNTVFMDVPWSVAGGS*GTHWLL
Trigger: GAGGAGCCAGTGAGTCCCCCAGGACCCACCAGCCAC...TGACCACGGTACATCCATGAAGACAGTGTTACACGTAAATGAAGTATTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTACACTGCTTTCTGACTaGAGGCAGGCGGCTAAGGTA +
Preference number: 2 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSTLLSD*RQAAKV
Trigger: TACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGT...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCCCCATAATTGCCGGCTaGTTGTTCTCTATGTTCTTT +
Preference number: 2 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASPIIAG*LFSMFF
Trigger: AAAGAACATAGAGAACAATCAGCCGGCAATTATGGG...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp CACCAGCAGCTGTCTGTCCTGAAGTTTGGTTTTCTGTTTCATACACGTGCAAAGTACGACAGGGAGACTTaGGAGGACAAAGTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: HQQLSVLKFGFLFHTRAKYDRET*EDKVLP
Trigger: AGGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTA...CTTTGCACGTGTATGAAACAGAAAACCAAACTTCAGGACAGACAGCTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CCA 90 bp TCCCATAATTGCCGGCTGATTGTTCTCTATGTTCTTTACAAGAAACCCACACCCAATGCCGAGGCAGAATaGGACAGAGGGATGGAGGAG +
Preference number: 2 (lower is better)
Translates to: SHNCRLIVLYVLYKKPTPNAEAE*DRGMEE
Trigger: CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATT...GGGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAGCCGGCAATTATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTGGTGAGCAGGCTTTGTaGAGACCTGCTGTAAAGATG +
Preference number: 2 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSGEQAL*RPAVKM
Trigger: CATCTTTACAGCAGGTCTCCACAAAGCCTGCTCACC...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR TCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCTTGTACACTAGACAATaGAATGAGGTGACAAAGGGT +
Preference number: 2 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASLYTRQ*NEVTKG
Trigger: ACCCTTTGTCACCTCATTTCATTGTCTAGTGTACAA...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR GCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTACATCAGCTATCAGCTaGAAGATGACAAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSTSAIS*KMTSPV
Trigger: CACAGGGCTTGTCATCTTGCAGCTGATAGCTGATGT...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp GCTAAGGTACGGCAATCTTATTCTGTAAAGCAATCACAAGAGACACCCCAGGCCGAGGAGAATGTAGCTTaGCTTTCTGGCTTTGAACCC +
Preference number: 2 (lower is better)
Translates to: AKVRQSYSVKQSQETPQAEENVA*LSGFEP
Trigger: GGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTC...GGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CAA 90 bp CTGATTGTTCTCTATGTTCTTTACAAGAAACCCACACCCAAGGCGTaGTCAACTGGTGCCAACTGGGAGGAGAATGTAGCTTGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LIVLYVLYKKPTPKA*STGANWEENVAWLS
Trigger: AGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACCAGTTGACAACGCCTTGGGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR GCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTTCCTCCTCCCATAATTaGCGGCTGATTGTTCTCTAT +
Preference number: 2 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSSSSHN*RLIVLY
Trigger: ATAGAGAACAATCAGCCGGCAATTATGGGAGGAGGA...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CCA 90 bp GAAAAGAATACTTCATTTACGTGTAACACTGTCTTCATGGATGTACCGTGGTCAGGTGTTTGGCCCTGGTaGCCCCGACAGAGAAACAGA +
Preference number: 2 (lower is better)
Translates to: EKNTSFTCNTVFMDVPWSGVWPW*PRQRNR
Trigger: TCTGTTTCTCTGTCGGGGCCACCAGGGCCAAACACC...TGACCACGGTACATCCATGAAGACAGTGTTACACGTAAATGAAGTATTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR TCA 90 bp GACTCCATCATGACATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCAACTTGTCTAGAAGAGTaGACACTTTCCTTTAGTCCA +
Preference number: 2 (lower is better)
Translates to: DSIMTSTHQPTQFLIHCSTCLEE*TLSFSP
Trigger: TGGACTAAAGGAAAGTGTTCACTCTTCTAGACAAGT...TGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATGTCATGATGGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CCA 90 bp GAAAAGAATACTTCATTTACGTGTAACACTGTCTTCATGGATGTACCGTGGTCATTGAGGAGGAGGTTCTaGGCTGTGATGCTGGGAGTC +
Preference number: 2 (lower is better)
Translates to: EKNTSFTCNTVFMDVPWSLRRRF*AVMLGV
Trigger: GACTCCCAGCATCACAGCCCAGAACCTCCTCCTCAA...TGACCACGGTACATCCATGAAGACAGTGTTACACGTAAATGAAGTATTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR TCA 90 bp GGCTTTGTGGAGACCTGCTGTAAAGATGAGGAGACAATAGACACTGTAACATTCCCCATAATTGCCGGCTaGTTGTTCTCTATGTTCTTT +
Preference number: 2 (lower is better)
Translates to: GFVETCCKDEETIDTVTFPIIAG*LFSMFF
Trigger: AAAGAACATAGAGAACAATCAGCCGGCAATTATGGG...GAATGTTACAGTGTCTATTGTCTCCTCATCTTTACAGCAGGTCTCCACAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CCA 72 bp GAGGGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTaGCTGGTGGGTCCTGGGGGACTCACTGGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: EGWRRDGLMRGL*LVGPGGLTGSS
Trigger: GGAGGAGCCAGTGAGTCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR GCA 72 bp ATCCTGAATGTTGACGTCCGCCTCACAGGCCAGCAATaGTCTCACCACGTCCACCCGCCCGTGGCTGACGGC +
Preference number: 3 (lower is better)
Translates to: ILNVDVRLTGQQ*SHHVHPPVADG
Trigger: GCCGTCAGCCACGGGCGGGTGGACGTGGTGAGAGCATTGCTGGCCTGTGAGGCGGACGTCAACATTCAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR CCA 72 bp GCGTGGCTTGTGGCTGGTGGGTCCTGGGGGACTCACTaGCTCCTCCCTGTATTCACTCCTCGGCTGAAGACG +
Preference number: 3 (lower is better)
Translates to: AWLVAGGSWGTH*LLPVFTPRLKT
Trigger: CGTCTTCAGCCGAGGAGTGAATACAGGGAGGAGCCAGTGAGTCCCCCAGGACCCACCAGCCACAAGCCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR TCA 72 bp CACCATCAGTGCTGTGCTCCCGTCGCGGTCAGTGAGTaGGATGTCACAGCTAGGCACAGCCAGCAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: HHQCCAPVAVSE*DVTARHSQQEP
Trigger: GGGCTCCTGCTGGCTGTGCCTAGCTGTGACATCTCACTCACTGACCGCGACGGGAGCACAGCACTGATGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR TCA 72 bp AGTGCAGGGCAGTGTTACCATTGCTGTCGGCGATGTTaGCCACGTAGTCCAGCAGCCGGGCAGACATGGCCC +
Preference number: 3 (lower is better)
Translates to: SAGQCYHCCRRC*PRSPAAGQTWP
Trigger: GGGCCATGTCTGCCCGGCTGCTGGACTACGTGGTCAACATCGCCGACAGCAATGGTAACACTGCCCTGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR CCA 72 bp CGGGAAGGAGAGGAGAGACTGGTGGGTGTTTGGCCCTaGTGGCCCCGACAGAGAAACAGAAAGCAGCAGCGA +
Preference number: 3 (lower is better)
Translates to: REGEERLVGVWP*WPRQRNRKQQR
Trigger: TCGCTGCTGCTTTCTGTTTCTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 72 bp CCCCGCTGTCCAGCAACTGCCGCACCACAGGGAAGTTaGCGTGTGACACTGAGTAGTGCAGGGCAGTGTTAC +
Preference number: 3 (lower is better)
Translates to: PRCPATAAPQGS*RVTLSSAGQCY
Trigger: GTAACACTGCCCTGCACTACTCAGTGTCACACGCCAACTTCCCTGTGGTGCGGCAGTTGCTGGACAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR CCA 72 bp GGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTaGGGGACTCACTGGCTCCTCCCTGTATTCACTCCT +
Preference number: 3 (lower is better)
Translates to: GRFDAWLVAGGS*GTHWLLPVFTP
Trigger: AGGAGTGAATACAGGGAGGAGCCAGTGAGTCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR TCA 72 bp GTAGATGTCAGGGCTCCCTCAGGGAAGTTCAGGGGCTaGGGAATGCCGAGGCAGAATGGGACAGAGGGATGG +
Preference number: 3 (lower is better)
Translates to: VDVRAPSGKFRG*GMPRQNGTEGW
Trigger: CCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTGACATCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CCA 72 bp GAAGGAGAGGAGAGACTGGTGGGTGTTTGGCCCTGGTaGCCCCGACAGAGAAACAGAAAGCAGCAGCGACAG +
Preference number: 3 (lower is better)
Translates to: EGEERLVGVWPW*PRQRNRKQQRQ
Trigger: CTGTCGCTGCTGCTTTCTGTTTCTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CAA 90 bp TGTCAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGGAGCGAACGAGCACTaGATGTTCATGCGTGAGTAC +
Preference number: 3 (lower is better)
Translates to: CQGSLREVQGLRNAEAEWGANEH*MFMREY
Trigger: GTACTCACGCATGAACATCAAGTGCTCGTTCGCTCC...CCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR TCA 72 bp TTCCAAGTCACAGGACATCAGCTATCAGCTGCAAGATaGCAAGCCCTGTGCATGTGTGCGCGCGCGCGCGTG +
Preference number: 3 (lower is better)
Translates to: FQVTGHQLSAAR*QALCMCARARV
Trigger: CACGCGCGCGCGCGCACACATGCACAGGGCTTGTCATCTTGCAGCTGATAGCTGATGTCCTGTGACTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR GCA 72 bp TTCATGCGTGAGTACAGCATAGATGCGATCTCGCTCTaGCCAGCGTCCAGGGCCACCATCAGTGCTGTGCTC +
Preference number: 3 (lower is better)
Translates to: FMREYSIDAISL*PASRATISAVL
Trigger: GAGCACAGCACTGATGGTGGCCCTGGACGCTGGGCAGAGCGAGATCGCATCTATGCTGTACTCACGCATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR-3UTR CAA 90 bp GGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCTATTGTACCTTGGCTTTCTGGCTTaGAACCCAGGGTGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: GPEDTVWRWRAVDKTLLYLGFLA*NPGCWE
Trigger: TTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAG...GTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CCA 72 bp TTAGTCCATGAGTCTCAATGCTGCCCTGCTGAGGTTTaGCGCCAAGGCCCAGTGGGTTCAGCTGTGATCTGG +
Preference number: 3 (lower is better)
Translates to: LVHESQCCPAEV*RQGPVGSAVIW
Trigger: CCAGATCACAGCTGAACCCACTGGGCCTTGGCGCCAAACCTCAGCAGGGCAGCATTGAGACTCATGGACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 72 bp AAACTGGAGTATAGCGGGAAGGAGAGGAGAGACTGGTaGGTGTTTGGCCCTGGTGGCCCCGACAGAGAAACA +
Preference number: 3 (lower is better)
Translates to: KLEYSGKERRDW*VFGPGGPDRET
Trigger: TGTTTCTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGCTATACTCCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 72 bp AGAAAACTGGAGTATAGCGGGAAGGAGAGGAGAGACTaGTGGGTGTTTGGCCCTGGTGGCCCCGACAGAGAA +
Preference number: 3 (lower is better)
Translates to: RKLEYSGKERRD*WVFGPGGPDRE
Trigger: TTCTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGCTATACTCCAGTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CAA 90 bp ATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGAACAGGGAGGTCCTTGGCTTTCTGGCTTaGAACCCAGGGTGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: ISRSSLLCQALPVGNREVLGFLA*NPGCWE
Trigger: TTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAG...GACCTCCCTGTTCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CAA 90 bp GGTGCCAACTGGGAGGAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGAGGGCAGTGTTACCATaGCTGTCGGCGATGTTGACC +
Preference number: 3 (lower is better)
Translates to: GANWEENVAWLSGFEPRVRAVLP*LSAMLT
Trigger: GGTCAACATCGCCGACAGCAATGGTAACACTGCCCT...CACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR CCA 72 bp AGAGACACCCCAGGCCCTGAAGACACAGTCTGGAGGTaGAGGGCAGTGGACAAGACCCTATTGTACACTAGA +
Preference number: 3 (lower is better)
Translates to: RDTPGPEDTVWR*RAVDKTLLYTR
Trigger: TCTAGTGTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CCA 72 bp GTTTGGCGCCAAGGCCCAGTGGGTTCAGCTGTGATCTaGATACGACAGGGAGACTTGAGAGGACAAAGTCCT +
Preference number: 3 (lower is better)
Translates to: VWRQGPVGSAVI*IRQGDLRGQSP
Trigger: AGGACTTTGTCCTCTCAAGTCTCCCTGTCGTATCCAGATCACAGCTGAACCCACTGGGCCTTGGCGCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CAA 90 bp GACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCTATTGTACACTAGACAAAGCCCGGTGATCTCCTaGTGTCCGTGCTCACATGCA +
Preference number: 3 (lower is better)
Translates to: DTVWRWRAVDKTLLYTRQSPVIS*CPCSHA
Trigger: TGCATGTGAGCACGGACACAAGGAGATCACCGGGCT...TTGTCTAGTGTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR CCA 72 bp ACAGTCTCTGTTTACTCTCCTTTGAGGAGGAGGTTCTaGGCTGTGATGCTGGGAGTCACTCCGGAATGGCCT +
Preference number: 3 (lower is better)
Translates to: TVSVYSPLRRRF*AVMLGVTPEWP
Trigger: AGGCCATTCCGGAGTGACTCCCAGCATCACAGCCCAGAACCTCCTCCTCAAAGGAGAGTAAACAGAGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CAA 90 bp GGTCTGAAAGTATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGAAAGGCTTCCAGGAGCTaGAGCCTGGTAGATGTCAGG +
Preference number: 3 (lower is better)
Translates to: GLKVFLEVVSSAKHSPWGKASRS*SLVDVR
Trigger: CCTGACATCTACCAGGCTCAAGCTCCTGGAAGCCTT...TCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAATACTTTCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR TCA 72 bp CTGGCTTTGGCATTGACATTCCCAAGCCGGAAGAGCTaGAGGATGGTCTCAATGTCGTCCTGGGTCTTCAAC +
Preference number: 3 (lower is better)
Translates to: LALALTFPSRKS*RMVSMSSWVFN
Trigger: GTTGAAGACCCAGGACGACATTGAGACCATCCTTCAGCTCTTCCGGCTTGGGAATGTCAATGCCAAAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR CCA 72 bp TTGTCAACTGGTGCCAACTGGGAGGAGAATGTAGCTTaGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAG +
Preference number: 3 (lower is better)
Translates to: LSTGANWEENVA*LSGFEPRVLGK
Trigger: CTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACCAGTTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR-3UTR CAA 90 bp GACTCCATCATGACATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCAAAGGCTTCCAGGAGCTaGAGCCTGGTAGATGTCAGG +
Preference number: 3 (lower is better)
Translates to: DSIMTSTHQPTQFLIHCSKASRS*SLVDVR
Trigger: CCTGACATCTACCAGGCTCAAGCTCCTGGAAGCCTT...TGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATGTCATGATGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CAA 90 bp AATGAGGTGACAAAGGGTGGTGAGCAGGCTTTGTGGAGACCTGCTGTAAAGATGTGGCTGGCTTTGGCATaGACATTCCCAAGCCGGAAG +
Preference number: 3 (lower is better)
Translates to: NEVTKGGEQALWRPAVKMWLALA*TFPSRK
Trigger: CTTCCGGCTTGGGAATGTCAATGCCAAAGCCAGCCA...CATCTTTACAGCAGGTCTCCACAAAGCCTGCTCACCACCCTTTGTCACCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
3UTR CCA 72 bp AAACCCACACCCAAGGCGTTGTCAACTGGTGCCAACTaGGAGGAGAATGTAGCTTGGCTTTCTGGCTTTGAA +
Preference number: 3 (lower is better)
Translates to: KPTPKALSTGAN*EENVAWLSGFE
Trigger: TTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACCAGTTGACAACGCCTTGGGTGTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CCA 72 bp CAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTaGACAAGACCCTATTGTACACTAGACAATGAAATG +
Preference number: 3 (lower is better)
Translates to: QALKTQSGGGGQ*TRPYCTLDNEM
Trigger: CATTTCATTGTCTAGTGTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CCA 72 bp GCTGATGCTTCCAGAACCTTAAATAAACTCCCTTGCTaGCTACAAGGCTGGAACTCAGGGCTCAGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: ADASRTLNKLPC*LQGWNSGLSSE
Trigger: CTCTGAGCTGAGCCCTGAGTTCCAGCCTTGTAGCCAGCAAGGGAGTTTATTTAAGGTTCTGGAAGCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR TCA 72 bp AAAGCCTGTCACTTTAAGCTAGTTCTGGGAGTGCTCTaGGGCCAGCCAGCTCTTAATCAGGAACATATGGGC +
Preference number: 3 (lower is better)
Translates to: KACHFKLVLGVL*GQPALNQEHMG
Trigger: GCCCATATGTTCCTGATTAAGAGCTGGCTGGCCTCAGAGCACTCCCAGAACTAGCTTAAAGTGACAGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 72 bp AGAACCTTAAATAAACTCCCTTGCTGGCTACAAGGCTaGAACTCAGGGCTCAGCTCAGAGCACGACCTTTCA +
Preference number: 3 (lower is better)
Translates to: RTLNKLPCWLQG*NSGLSSEHDLS
Trigger: TGAAAGGTCGTGCTCTGAGCTGAGCCCTGAGTTCCAGCCTTGTAGCCAGCAAGGGAGTTTATTTAAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR GCA 72 bp ATAGCTGATGCTTCCAGAACCTTAAATAAACTCCCTTaGTGGCTACAAGGCTGGAACTCAGGGCTCAGCTCA +
Preference number: 3 (lower is better)
Translates to: IADASRTLNKLP*WLQGWNSGLSS
Trigger: TGAGCTGAGCCCTGAGTTCCAGCCTTGTAGCCAGCAAGGGAGTTTATTTAAGGTTCTGGAAGCATCAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CAA 90 bp TTTTCTGAGGAGCGTGTGCTTTGGGTCATAGCTGATGCTTCCAGAACCTTAAATATACGACAGGGAGACTaGAGAGGACAAAGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: FSEERVLWVIADASRTLNIRQGD*RGQSPP
Trigger: GGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTAT...ATTTAAGGTTCTGGAAGCATCAGCTATGACCCAAAGCACACGCTCCTCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CAA 90 bp TCAGCTGTGATCTGGATACGACAGGGAGACTTGAGAGGACAAAGTCCTCCCTATTACTCTTTTGTCCCTTaGGATTTCAGCAAAGCCTGT +
Preference number: 3 (lower is better)
Translates to: SAVIWIRQGDLRGQSPPYYSFVP*DFSKAC
Trigger: ACAGGCTTTGCTGAAATCCAAAGGGACAAAAGAGTA...ATAGGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTATCCAGATCACAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR TCA 72 bp ACAAGACCCTATTGTACACTAGACAATGAAATGAGGTaGCAAAGGGTGGTGAGCAGGCTTTGTGGAGACCTG +
Preference number: 3 (lower is better)
Translates to: TRPYCTLDNEMR*QRVVSRLCGDL
Trigger: CAGGTCTCCACAAAGCCTGCTCACCACCCTTTGTCACCTCATTTCATTGTCTAGTGTACAATAGGGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR GCA 72 bp GTCTGTCCTGAAGTTTGGTTTTCTGTTTCATACACGTaGAAAGACTCCATCATGACATCTACCCACCAGCCA +
Preference number: 3 (lower is better)
Translates to: VCPEVWFSVSYT*KDSIMTSTHQP
Trigger: TGGCTGGTGGGTAGATGTCATGATGGAGTCTTTGCACGTGTATGAAACAGAAAACCAAACTTCAGGACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 72 bp GACAGAAACAGGGGCTTTTCTGAGGAGCGTGTGCTTTaGGTCATAGCTGATGCTTCCAGAACCTTAAATAAA +
Preference number: 3 (lower is better)
Translates to: DRNRGFSEERVL*VIADASRTLNK
Trigger: TTTATTTAAGGTTCTGGAAGCATCAGCTATGACCCAAAGCACACGCTCCTCAGAAAAGCCCCTGTTTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR-3UTR CAA 90 bp GAAAAGAATACTTCATTTACGTGTAACACTGTCTTCATGGATGTACCGTGGTCAATAACTTCTTGTAAGTaGGTCATTTCCAAGTCACAG +
Preference number: 3 (lower is better)
Translates to: EKNTSFTCNTVFMDVPWSITSCK*VISKSQ
Trigger: CTGTGACTTGGAAATGACCAACTTACAAGAAGTTAT...TGACCACGGTACATCCATGAAGACAGTGTTACACGTAAATGAAGTATTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CCA 72 bp AAAAGAATACTTCATTTACGTGTAACACTGTCTTCATaGATGTACCGTGGTCACAGAGTAGAAAGAAAACTG +
Preference number: 3 (lower is better)
Translates to: KRILHLRVTLSS*MYRGHRVERKL
Trigger: CAGTTTTCTTTCTACTCTGTGACCACGGTACATCCATGAAGACAGTGTTACACGTAAATGAAGTATTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp GGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTGGGGGACCCCGGCTGCCGTGCTaGCTGCCACCTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: GWRRDGLMRGLWLVGPGGPRLPC*LPPPLP
Trigger: GGGAAGTGGAGGTGGCAGCCAGCACGGCAGCCGGGG...TCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp CAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACCAGCAGGCCCACGCCTaGCAGGGAGCTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGSLREVQGLRNAEAEWDQQAHA*QGAGGA
Trigger: GGCTCCACCAGCTCCCTGGCAGGCGTGGGCCTGCTG...GTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp CAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACGCGGACCTGGGTGTCTaGTGGTGGCCAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGSLREVQGLRNAEAEWDADLGV*WWPGLG
Trigger: CCCCAGGCCTGGCCACCACCAGACACCCAGGTCCGC...GTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GCGGGAAGGAGAGGAGAGACTGGTGGGTGTTTGGCCCTGGTGGCCCCGACAGAGGGCCACTGCAGCCCCTaGAGGCCTGAGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: AGRRGETGGCLALVAPTEGHCSP*RPELRT
Trigger: TGTCCTCAGCTCAGGCCTCCAGGGGCTGCAGTGGCC...CTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp TCACAGGCCAGCAATGCTCTCACCACGTCCACCCGCCCGTGGCTGACGGCCAGCGGTGCAGGCACACGCTaGGATTCCTGGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQASNALTTSTRPWLTASGAGTR*DSWESW
Trigger: CCAGCTCTCCCAGGAATCCCAGCGTGTGCCTGCACC...GCTGGCCGTCAGCCACGGGCGGGTGGACGTGGTGAGAGCATTGCTGGCCTGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp ACCCAGGGTGCTGGGAAAGGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCGGCTGCCGTGCTGGCTaGCACCTCCACTTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TQGAGKGFQELEPGRCQGGCRAG*HLHFPG
Trigger: CCCCGGGAAGTGGAGGTGGCAGCCAGCACGGCAGCC...GCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCCTTTCCCAGCACCCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp ACCCAGGGTGCTGGGAAAGGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCGGGCCCCGGCTGCCGTaGTGGCTGCCACCTCCACTT +
Preference number: 4 (lower is better)
Translates to: TQGAGKGFQELEPGRCQGGPRLP*WLPPPL
Trigger: AAGTGGAGGTGGCAGCCAGCACGGCAGCCGGGGCCC...GCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCCTTTCCCAGCACCCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp TGTCAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGCTGGGGAAGGCCGCTaGGGAGGCCTGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CQGSLREVQGLRNAEAEWAGEGR*GGLTRG
Trigger: ACCCCTGGTCAGGCCTCCCCAGCGGCCTTCCCCAGC...CCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp ACAGCTAGGCACAGCCAGCAGGAGCCCGGTGATCTCCTTGTGTCCGTGCTCACAGGCCAGGCCTGGGGCTaGAGGTCGACCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TARHSQQEPGDLLVSVLTGQAWG*RSTCWV
Trigger: GACCCAGCAGGTCGACCTCCAGCCCCAGGCCTGGCC...TGTGAGCACGGACACAAGGAGATCACCGGGCTCCTGCTGGCTGTGCCTAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTGGGGGAACACGCTGGGATTCCTaGGAGAGCTGGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GWRRDGLMRGLWLVGPGGTRWDS*ESWGPS
Trigger: GGAGGGGCCCCAGCTCTCCCAGGAATCCCAGCGTGT...TCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp ACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCCCAGCTGGCGCAGCTTaGGCAGGGCTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: TPQALKTQSGGGGQWTRPPAGAA*AGLQPS
Trigger: AGATGGCTGGAGCCCTGCGCAAGCTGCGCCAGCTGG...GGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTGGGGGACACAAGCTCAGGGTGTaGGTCACTGCGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GWRRDGLMRGLWLVGPGGHKLRV*VTAAGQ
Trigger: CTGGCCTGCCGCAGTGACGCACACCCTGAGCTTGTG...TCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGAGGGATGGAGGAGGCTGGGGAAGGCCGCTaGGGAGGCCTGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: EVQGLRNAEAEWDRGMEEAGEGR*GGLTRG
Trigger: ACCCCTGGTCAGGCCTCCCCAGCGGCCTTCCCCAGC...CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGAGGGATGGAGGAGGGCCAGGCCTGGGGCTaGAGGTCGACCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EVQGLRNAEAEWDRGMEEGQAWG*RSTCWV
Trigger: GACCCAGCAGGTCGACCTCCAGCCCCAGGCCTGGCC...CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGAGGGATGGAGGAGGCGGACCTGGGTGTCTaGTGGTGGCCAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EVQGLRNAEAEWDRGMEEADLGV*WWPGLG
Trigger: CCCCAGGCCTGGCCACCACCAGACACCCAGGTCCGC...CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGAGGGATGGAGGAGCCCCGGCTGCCGTGCTaGCTGCCACCTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: EVQGLRNAEAEWDRGMEEPRLPC*LPPPLP
Trigger: GGGAAGTGGAGGTGGCAGCCAGCACGGCAGCCGGGG...CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GCGGGAAGGAGAGGAGAGACTGGTGGGTGTTTGGCCCTGGTGGCCCCGACAGAGGGTAGCTGTGGGCAGTaGGCACATGGTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: AGRRGETGGCLALVAPTEGSCGQ*AHGLHH
Trigger: GTGGTGGAGACCATGTGCCCACTGCCCACAGCTACC...CTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CAA 72 bp ACAGAGGGATGGAGGAGGGACGGTTTGATGCGTGGCTaGTGGCTGGTGGGTCCTGGGGGACTCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TEGWRRDGLMRG*WLVGPGGLTGS
Trigger: GGAGCCAGTGAGTCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp ACAGCTAGGCACAGCCAGCAGGAGCCCGGTGATCTCCTTGTGTCCGTGCTCACAGCGCATCCAGCAGCGTaGGCTCCACACGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TARHSQQEPGDLLVSVLTAHPAA*APHEGW
Trigger: CCAACCCTCGTGTGGAGCGCACGCTGCTGGATGCGC...TGTGAGCACGGACACAAGGAGATCACCGGGCTCCTGCTGGCTGTGCCTAGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp ACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCCTGACCAGGGGTTCCTaGGAATGGGGCGGGCACATG +
Preference number: 4 (lower is better)
Translates to: TPQALKTQSGGGGQWTRPLTRGS*EWGGHM
Trigger: CATGTGCCCGCCCCATTCCCAGGAACCCCTGGTCAG...GGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTGGGGGACAAGGCTCCGTACTGTaGGTAGAAGCCGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: GWRRDGLMRGLWLVGPGGQGSVL*VEAAAT
Trigger: TGTGGCCGCGGCTTCTACCCACAGTACGGAGCCTTG...TCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGCAGTGTTACCATTGCTGTCGGCGATGTTGACCACGTAGTCCAGCAGCCGGGCGGCCACTGCAGCCCCTaGAGGCCTGAGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: GSVTIAVGDVDHVVQQPGGHCSP*RPELRT
Trigger: TGTCCTCAGCTCAGGCCTCCAGGGGCTGCAGTGGCC...GCCCGGCTGCTGGACTACGTGGTCAACATCGCCGACAGCAATGGTAACACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTGGGGGAGTCGCGGTCAGTGAGTaGGATGTCACAGCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: GWRRDGLMRGLWLVGPGGVAVSE*DVTARH
Trigger: GTGCCTAGCTGTGACATCTCACTCACTGACCGCGAC...TCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp ATCACAAGAGACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGCGCATCCAGCAGCGTaGGCTCCACACGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ITRDTPGPEDTVWRWRAVAHPAA*APHEGW
Trigger: CCAACCCTCGTGTGGAGCGCACGCTGCTGGATGCGC...CACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGTCTCTTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GGTGCCAACTGGGAGGAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGGGGCCCCGGCTGCCGTaGTGGCTGCCACCTCCACTT +
Preference number: 4 (lower is better)
Translates to: GANWEENVAWLSGFEPRVGPRLP*WLPPPL
Trigger: AAGTGGAGGTGGCAGCCAGCACGGCAGCCGGGGCCC...CACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp CAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGCACAGAGACTCTGTaGACGTCCACCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QGSLREVQGLRNAEAEWDSTETL*TSTRSP
Trigger: CGGGCTCCTGGTGGACGTCCACAGAGTCTCTGTGCT...GTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GCGGGAAGGAGAGGAGAGACTGGTGGGTGTTTGGCCCTGGTGGCCCCGACAGAGGGCAGCTTCACCATCTaGAATGCCCAAGTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: AGRRGETGGCLALVAPTEGSFTI*NAQVPF
Trigger: GAACGGGACTTGGGCATTCCAGATGGTGAAGCTGCC...CTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp ATCACAAGAGACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGTGTCCACGCGGACCTaGGTGTCTGGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ITRDTPGPEDTVWRWRAVVSTRT*VSGGGQ
Trigger: CTGGCCACCACCAGACACCCAGGTCCGCGTGGACAC...CACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGTCTCTTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGAGGGATGGAGGAGGTGTCCACGCGGACCTaGGTGTCTGGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EVQGLRNAEAEWDRGMEEVSTRT*VSGGGQ
Trigger: CTGGCCACCACCAGACACCCAGGTCCGCGTGGACAC...CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp ACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCCTGCGATGCTGCTGCTaGCCTGGTGGGCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: TPQALKTQSGGGGQWTRPLRCCC*PGGLLV
Trigger: GACAAGAAGCCCACCAGGCCAGCAGCAGCATCGCAG...GGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp ATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGAACAGGGAGGTCGGGGCCCCTCCAGACTaGTCGTGGCCACTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ISRSSLLCQALPVGNREVGAPPD*SWPLQP
Trigger: GGGCTGCAGTGGCCACGACCAGTCTGGAGGGGCCCC...GACCTCCCTGTTCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGAGGGATGGAGGAGGAACGGGGATCAGCTTaGCCTGCTCCTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: EVQGLRNAEAEWDRGMEEERGSA*PAPPAG
Trigger: GCCAGCTGGAGGAGCAGGTCAAGCTGATCCCCGTTC...CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GACTCCATCATGACATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCACCACCCGCCCGTGGCTaGCGGCCAGCATCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: DSIMTSTHQPTQFLIHCSPPARG*RPASGP
Trigger: CGGCCCTGATGCTGGCCGTCAGCCACGGGCGGGTGG...TGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATGTCATGATGGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp ATCACAAGAGACACCCCAGGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGGGATCAGCTTGACCTaGTCCTCCAGCTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ITRDTPGPEDTVWRWRAVGISLT*SSSWRS
Trigger: GCTGCGCCAGCTGGAGGAGCAGGTCAAGCTGATCCC...CACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCCTGGGGTGTCTCTTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp ACCCAGGGTGCTGGGAAAGGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCGTCCTGCGATGCTGCTaGTGGCCTGGTGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TQGAGKGFQELEPGRCQGVLRCC*WPGGLL
Trigger: AAGAAGCCCACCAGGCCAGCAGCAGCATCGCAGGAC...GCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCCTTTCCCAGCACCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTGGGGGATGGGCAGTGGGCACATaGTCTCCACCACTTCATGAC +
Preference number: 4 (lower is better)
Translates to: GWRRDGLMRGLWLVGPGGWAVGT*SPPLHD
Trigger: GTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCA...TCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCGGGGCCCCTCCAGACTaGTCGTGGCCACTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASGAPPD*SWPLQP
Trigger: GGGCTGCAGTGGCCACGACCAGTCTGGAGGGGCCCC...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCTCGACCTGCTGGGTCTaGGCCGCCCGCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASSTCWV*AARSSC
Trigger: ACAGGAGCTGCGGGCGGCTCAGACCCAGCAGGTCGA...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTGGGGGAGTTGACTTCAGGGTCTaGGGGGTCCTCTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GWRRDGLMRGLWLVGPGGVDFRV*GVLFPL
Trigger: AAGAGGAAAGAGGACCCCGCAGACCCTGAAGTCAAC...TCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GAACACTTTCCTTTAGTCCATGAGTCTCAATGCTGCCCTGCTGAGGTTTGGCGCCAGGGTGTGCGTCACTaGGGCAGGCCAGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EHFPLVHESQCCPAEVWRQGVRH*GRPGAA
Trigger: GGCTGCGCCTGGCCTGCCGCAGTGACGCACACCCTG...GCGCCAAACCTCAGCAGGGCAGCATTGAGACTCATGGACTAAAGGAAAGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp GAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGAGGGATGGAGGAGAGCACAGAGACTCTGTaGACGTCCACCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: EVQGLRNAEAEWDRGMEESTETL*TSTRSP
Trigger: CGGGCTCCTGGTGGACGTCCACAGAGTCTCTGTGCT...CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCTCCCTCAGGGAAGTTCAGATAGGGCGTTTCCACTaGGTACGGTGGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GFQELEPGRCQGSLREVQIGRFH*VRWVWL
Trigger: GAGCCAGACCCACCGTACTCAGTGGAAACGCCCTAT...CTGAACTTCCCTGAGGGAGCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCTCCCTCAGGGAAGTTCAGGTCTCCACCACTTCATaGCTGCGGAACACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GFQELEPGRCQGSLREVQVSTTS*LRNTRV
Trigger: CACCCTCGTGTTCCGCAGTCATGAAGTGGTGGAGAC...CTGAACTTCCCTGAGGGAGCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp ATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGAACAGGGAGGTCGCTGTACCGCCACCCTaGGCAGTGTGTGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ISRSSLLCQALPVGNREVAVPPP*AVCGPS
Trigger: AGAAGGGCCACACACTGCGCAGGGTGGCGGTACAGC...GACCTCCCTGTTCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp TGTCAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGCTGTACCACAGAGGCTaGAGCAGGGCGTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: CQGSLREVQGLRNAEAEWLYHRG*SRAWIN
Trigger: GTTAATCCACGCCCTGCTGCAGCCTCTGTGGTACAG...CCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GGAAGAGCTGAAGGATGGTCTCAATGTCGTCCTGGGTCTTCAACGTGGCCAGGGCGGAGTTTTCTGCTGTaGTGGAGTCCTCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GRAEGWSQCRPGSSTWPGRSFLL*WSPPRG
Trigger: CCCCCTCGGAGGACTCCAGCACAGCAGAAAACTCCG...CCCTGGCCACGTTGAAGACCCAGGACGACATTGAGACCATCCTTCAGCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAACACTTTCCTTTAGTCCATGAGTCTCAATGCTGCCCTGCTGAGGTTTGGCGCGGTCTGGCTCCTTGCTaGGGAAGGCCGCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EHFPLVHESQCCPAEVWRGLAPC*GRPLGR
Trigger: CCTCCCCAGCGGCCTTCCCCAGCAAGGAGCCAGACC...GCGCCAAACCTCAGCAGGGCAGCATTGAGACTCATGGACTAAAGGAAAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp TGTCAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGCCTCTTTCCTCTTCGTaGCCAAAGAGGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CQGSLREVQGLRNAEAEWPLSSS*PKRLCL
Trigger: CAGGCAGAGCCTCTTTGGCCACGAAGAGGAAAGAGG...CCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAACACTTTCCTTTAGTCCATGAGTCTCAATGCTGCCCTGCTGAGGTTTGGCGCACGTCCACCCGCCCGTaGCTGACGGCCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: EHFPLVHESQCCPAEVWRTSTRP*LTASIR
Trigger: CCTGATGCTGGCCGTCAGCCACGGGCGGGTGGACGT...GCGCCAAACCTCAGCAGGGCAGCATTGAGACTCATGGACTAAAGGAAAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR TCA 90 bp GACTCCATCATGACATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCATCGACCTGCTGGGTCTaGGCCGCCCGCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: DSIMTSTHQPTQFLIHCSSTCWV*AARSSC
Trigger: ACAGGAGCTGCGGGCGGCTCAGACCCAGCAGGTCGA...TGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATGTCATGATGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR TCA 90 bp GGAAGAGCTGAAGGATGGTCTCAATGTCGTCCTGGGTCTTCAACGTGGCCAGGGGTCTCCACCACTTCATaGCTGCGGAACACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRAEGWSQCRPGSSTWPGVSTTS*LRNTRV
Trigger: CACCCTCGTGTTCCGCAGTCATGAAGTGGTGGAGAC...CCCTGGCCACGTTGAAGACCCAGGACGACATTGAGACCATCCTTCAGCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp CACTTGATGTTCATGCGTGAGTACAGCATAGATGCGATCTCGCTCTGCCCAGCGCCTGGAGGCCTGAGCTaGGGACATTCAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HLMFMREYSIDAISLCPAPGGLS*GHSAGL
Trigger: GAGCCCAGCTGAATGTCCTCAGCTCAGGCCTCCAGG...CGCTGGGCAGAGCGAGATCGCATCTATGCTGTACTCACGCATGAACATCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCTCCCTCAGGGAAGTTCAGGGCTGGCTTTGGCATTaGCATTCCCAAGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GFQELEPGRCQGSLREVQGWLWH*HSQAGR
Trigger: TCTTCCGGCTTGGGAATGTCAATGCCAAAGCCAGCC...CTGAACTTCCCTGAGGGAGCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTGGCTGCCGTGCTGGCTaGCACCTCCACTTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSGCRAG*HLHFPG
Trigger: CCCCGGGAAGTGGAGGTGGCAGCCAGCACGGCAGCC...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GGTGCCAACTGGGAGGAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGGTCCTGCGATGCTGCTaGTGGCCTGGTGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GANWEENVAWLSGFEPRVVLRCC*WPGGLL
Trigger: AAGAAGCCCACCAGGCCAGCAGCAGCATCGCAGGAC...CACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCCACAAGCTCAGGGTGTaGGTCACTGCGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASHKLRV*VTAAGQ
Trigger: CTGGCCTGCCGCAGTGACGCACACCCTGAGCTTGTG...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCCTGACCAGGGGTTCCTaGGAATGGGGCGGGCACATG +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASLTRGS*EWGGHM
Trigger: CATGTGCCCGCCCCATTCCCAGGAACCCCTGGTCAG...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp ATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGAACAGGGAGGTCGCCGGCTGTCCCCACTaGCATCAGAGCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: ISRSSLLCQALPVGNREVAGCPH*HQSTET
Trigger: AGTCTCTGTGCTCTGATGCCAGTGGGGACAGCCGGC...GACCTCCCTGTTCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACAGAGGGATGGAGGAGTGGGCAGTGGGCACATaGTCTCCACCACTTCATGAC +
Preference number: 4 (lower is better)
Translates to: EVQGLRNAEAEWDRGMEEWAVGT*SPPLHD
Trigger: GTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCA...CTCCTCCATCCCTCTGTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGAAGAGCTGAAGGATGGTCTCAATGTCGTCCTGGGTCTTCAACGTGGCCAGGGATGCTGCTGCTGGCCTaGTGGGCTTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GRAEGWSQCRPGSSTWPGMLLLA*WASCQW
Trigger: CCACTGACAAGAAGCCCACCAGGCCAGCAGCAGCAT...CCCTGGCCACGTTGAAGACCCAGGACGACATTGAGACCATCCTTCAGCTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp TGTCAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGGAAGAGCTGAAGGATaGTCTCAATGTCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CQGSLREVQGLRNAEAEWGRAEG*SQCRPG
Trigger: CCCAGGACGACATTGAGACCATCCTTCAGCTCTTCC...CCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp TCAGCTGTGATCTGGATACGACAGGGAGACTTGAGAGGACAAAGTCCTCCCTATAGGGCTCCAGCCATCTaGTCGCGCACGTGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SAVIWIRQGDLRGQSPPYRAPAI*SRTWAR
Trigger: CCTAGCCCACGTGCGCGAGCAGATGGCTGGAGCCCT...ATAGGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTATCCAGATCACAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp GGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCTATTGTACCTGTACCACAGAGGCTaGAGCAGGGCGTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: GPEDTVWRWRAVDKTLLYLYHRG*SRAWIN
Trigger: GTTAATCCACGCCCTGCTGCAGCCTCTGTGGTACAG...GTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCCAAGGCTCCGTACTGTaGGTAGAAGCCGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASQGSVL*VEAAAT
Trigger: TGTGGCCGCGGCTTCTACCCACAGTACGGAGCCTTG...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp CACTTGATGTTCATGCGTGAGTACAGCATAGATGCGATCTCGCTCTGCCCAGCGGGTAGCTGTGGGCAGTaGGCACATGGTCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: HLMFMREYSIDAISLCPAGSCGQ*AHGLHH
Trigger: GTGGTGGAGACCATGTGCCCACTGCCCACAGCTACC...CGCTGGGCAGAGCGAGATCGCATCTATGCTGTACTCACGCATGAACATCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCTATTGTACCTGAGGACATTCAGCTaGGCTCAGAACCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPEDTVWRWRAVDKTLLYLRTFS*AQNPCW
Trigger: CCAGCAAGGGTTCTGAGCCCAGCTGAATGTCCTCAG...GTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GGTTCAGCTGTGATCTGGATACGACAGGGAGACTTGAGAGGACAAAGTCCTCCCATAGGGCGTTTCCACTaGGTACGGTGGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSAVIWIRQGDLRGQSPPIGRFH*VRWVWL
Trigger: GAGCCAGACCCACCGTACTCAGTGGAAACGCCCTAT...GGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTATCCAGATCACAGCTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp AATGAGGTGACAAAGGGTGGTGAGCAGGCTTTGTGGAGACCTGCTGTAAAGATGGCTGTACCGCCACCCTaGGCAGTGTGTGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NEVTKGGEQALWRPAVKMAVPPP*AVCGPS
Trigger: AGAAGGGCCACACACTGCGCAGGGTGGCGGTACAGC...CATCTTTACAGCAGGTCTCCACAAAGCCTGCTCACCACCCTTTGTCACCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTAGGGCTCCAGCCATCTaGTCGCGCACGTGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSRAPAI*SRTWAR
Trigger: CCTAGCCCACGTGCGCGAGCAGATGGCTGGAGCCCT...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp AATGAGGTGACAAAGGGTGGTGAGCAGGCTTTGTGGAGACCTGCTGTAAAGATGGCCGCTTGTGAGTCCTaGGATGCTGCTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NEVTKGGEQALWRPAVKMAACES*DAAAGL
Trigger: CAGGCCAGCAGCAGCATCGCAGGACTCACAAGCGGC...CATCTTTACAGCAGGTCTCCACAAAGCCTGCTCACCACCCTTTGTCACCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GGCTTTGTGGAGACCTGCTGTAAAGATGAGGAGACAATAGACACTGTAACATTCCAGGGTGTGCGTCACTaGGGCAGGCCAGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GFVETCCKDEETIDTVTFQGVRH*GRPGAA
Trigger: GGCTGCGCCTGGCCTGCCGCAGTGACGCACACCCTG...GAATGTTACAGTGTCTATTGTCTCCTCATCTTTACAGCAGGTCTCCACAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCCTGCTGCTGGCCTGGTaGGCTTCTTGTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASLLLAW*ASCQWC
Trigger: ACACCACTGACAAGAAGCCCACCAGGCCAGCAGCAG...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp CACTTGATGTTCATGCGTGAGTACAGCATAGATGCGATCTCGCTCTGCCCAGCGCTGCTGCTGGCCTGGTaGGCTTCTTGTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: HLMFMREYSIDAISLCPALLLAW*ASCQWC
Trigger: ACACCACTGACAAGAAGCCCACCAGGCCAGCAGCAG...CGCTGGGCAGAGCGAGATCGCATCTATGCTGTACTCACGCATGAACATCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTACACGCTGGGATTCCTaGGAGAGCTGGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSTRWDS*ESWGPS
Trigger: GGAGGGGCCCCAGCTCTCCCAGGAATCCCAGCGTGT...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCCCAAGCCGGAAGAGCTaGAGGATGGTCTCAATGTCG +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASPSRKS*RMVSMS
Trigger: CGACATTGAGACCATCCTTCAGCTCTTCCGGCTTGG...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp CATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCATTTATCCATCCACGGGATCAGCTTGACCTaGTCCTCCAGCTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: HLPTSQPSFSSIAHLSIHGISLT*SSSWRS
Trigger: GCTGCGCCAGCTGGAGGAGCAGGTCAAGCTGATCCC...GTGGATGGATAAATGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp GCTAAGGTACGGCAATCTTATTCTGTAAAGCAATCACAAGAGACACCCCAGGCCGCCGCTTGTGAGTCCTaGGATGCTGCTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AKVRQSYSVKQSQETPQAAACES*DAAAGL
Trigger: CAGGCCAGCAGCAGCATCGCAGGACTCACAAGCGGC...GGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp CACTTGATGTTCATGCGTGAGTACAGCATAGATGCGATCTCGCTCTGCCCAGCGGGCAGCTTCACCATCTaGAATGCCCAAGTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: HLMFMREYSIDAISLCPAGSFTI*NAQVPF
Trigger: GAACGGGACTTGGGCATTCCAGATGGTGAAGCTGCC...CGCTGGGCAGAGCGAGATCGCATCTATGCTGTACTCACGCATGAACATCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp ATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGAACAGGGAGGTCAACTGGAGGTTCCTCTaGTTGACTTCAGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: ISRSSLLCQALPVGNREVNWRFL*LTSGSA
Trigger: CGCAGACCCTGAAGTCAACCAGAGGAACCTCCAGTT...GACCTCCCTGTTCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GCTAAGGTACGGCAATCTTATTCTGTAAAGCAATCACAAGAGACACCCCAGGCCGGTGCAGGCACACGCTaGGATTCCTGGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AKVRQSYSVKQSQETPQAGAGTR*DSWESW
Trigger: CCAGCTCTCCCAGGAATCCCAGCGTGTGCCTGCACC...GGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GCTAAGGTACGGCAATCTTATTCTGTAAAGCAATCACAAGAGACACCCCAGGCCGGAGGTTCCTCTGGTTaGCTTCAGGGTCTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: AKVRQSYSVKQSQETPQAGGSSG*LQGLRG
Trigger: ACCCCGCAGACCCTGAAGTCAACCAGAGGAACCTCC...GGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCGTTGACTTCAGGGTCTaGGGGGTCCTCTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASVDFRV*GVLFPL
Trigger: AAGAGGAAAGAGGACCCCGCAGACCCTGAAGTCAAC...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp TCCCATAATTGCCGGCTGATTGTTCTCTATGTTCTTTACAAGAAACCCACACCCCAGGGCCACCATCAGTaGTGTGCTCCCGTCGCGGTC +
Preference number: 4 (lower is better)
Translates to: SHNCRLIVLYVLYKKPTPQGHHQ*CAPVAV
Trigger: GACCGCGACGGGAGCACAGCACTGATGGTGGCCCTG...GGGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAGCCGGCAATTATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp GCTAAGGTACGGCAATCTTATTCTGTAAAGCAATCACAAGAGACACCCCAGGCCGCCGGCTGTCCCCACTaGCATCAGAGCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: AKVRQSYSVKQSQETPQAAGCPH*HQSTET
Trigger: AGTCTCTGTGCTCTGATGCCAGTGGGGACAGCCGGC...GGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTTTGTCAGTGGTGTCCTaGGCAGCCGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSLSVVS*AAGTGF
Trigger: GAACCCTGTCCCGGCTGCCCAGGACACCACTGACAA...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGTCTGAAAGTATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGAAGTTTTCTGCTGTGCTaGAGTCCTCCGAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: GLKVFLEVVSSAKHSPWGSFLLC*SPPRGT
Trigger: AGTCCCCCTCGGAGGACTCCAGCACAGCAGAAAACT...TCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAATACTTTCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCTCCCTCAGGGAAGTTCAGACTCCTGAAGCACTGTaGTATAGGCCACTTTCGAAT +
Preference number: 4 (lower is better)
Translates to: GFQELEPGRCQGSLREVQTPEAL*YRPLSN
Trigger: ATTCGAAAGTGGCCTATACCACAGTGCTTCAGGAGT...CTGAACTTCCCTGAGGGAGCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GGCTTTGTGGAGACCTGCTGTAAAGATGAGGAGACAATAGACACTGTAACATTCGAACGGGGATCAGCTTaGCCTGCTCCTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GFVETCCKDEETIDTVTFERGSA*PAPPAG
Trigger: GCCAGCTGGAGGAGCAGGTCAAGCTGATCCCCGTTC...GAATGTTACAGTGTCTATTGTCTCCTCATCTTTACAGCAGGTCTCCACAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp AATGAGGTGACAAAGGGTGGTGAGCAGGCTTTGTGGAGACCTGCTGTAAAGATGCCAAGCAGGCTGATATaGGGTCAGGGCTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: NEVTKGGEQALWRPAVKMPSRLI*GQGSDP
Trigger: TGGATCTGAGCCCTGACCTCATATCAGCCTGCTTGG...CATCTTTACAGCAGGTCTCCACAAAGCCTGCTCACCACCCTTTGTCACCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp CACCAGCAGCTGTCTGTCCTGAAGTTTGGTTTTCTGTTTCATACACGTGCAAAGCGGAGTTTTCTGCTGTaGTGGAGTCCTCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: HQQLSVLKFGFLFHTRAKRSFLL*WSPPRG
Trigger: CCCCCTCGGAGGACTCCAGCACAGCAGAAAACTCCG...CTTTGCACGTGTATGAAACAGAAAACCAAACTTCAGGACAGACAGCTGCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTGCCGTCTGTCCTGCCTaGCTGGCTTTGGCATTGACA +
Preference number: 4 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSAVCPA*LALALT
Trigger: TGTCAATGCCAAAGCCAGCCAGGCAGGACAGACGGC...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR TCA 90 bp TCCCATAATTGCCGGCTGATTGTTCTCTATGTTCTTTACAAGAAACCCACACCCGGAGGTTCCTCTGGTTaGCTTCAGGGTCTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SHNCRLIVLYVLYKKPTPGGSSG*LQGLRG
Trigger: ACCCCGCAGACCCTGAAGTCAACCAGAGGAACCTCC...GGGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAGCCGGCAATTATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp CATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCATTTATCCATCCACTCAGTTCTCGCTCTGTaGGGGCATTGGGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLPTSQPSFSSIAHLSIHSVLAL*GHWGSP
Trigger: TGGAGAACCCCAATGCCCTCACAGAGCGAGAACTGA...GTGGATGGATAAATGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR GCA 90 bp GGCTTTGTGGAGACCTGCTGTAAAGATGAGGAGACAATAGACACTGTAACATTCCTCACAGGCCAGCAATaGTCTCACCACGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GFVETCCKDEETIDTVTFLTGQQ*SHHVHP
Trigger: CGGGTGGACGTGGTGAGAGCATTGCTGGCCTGTGAG...GAATGTTACAGTGTCTATTGTCTCCTCATCTTTACAGCAGGTCTCCACAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp GAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGCTGGGAAAGGCTTCCTGTCTCTTTTCCTCCTaGAGCACTGACAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: ENVAWLSGFEPRVLGKASCLFSS*STDSLT
Trigger: AGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACA...GGAAGCCTTTCCCAGCACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp CATTCCCAAGCCGGAAGAGCTGAAGGATGGTCTCAATGTCGTCCTGGGTCTTCATGTCTCTTTTCCTCCTaGAGCACTGACAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: HSQAGRAEGWSQCRPGSSCLFSS*STDSLT
Trigger: AGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACA...TGAAGACCCAGGACGACATTGAGACCATCCTTCAGCTCTTCCGGCTTGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp TCCCATAATTGCCGGCTGATTGTTCTCTATGTTCTTTACAAGAAACCCACACCCTTGTCAGTGGTGTCCTaGGCAGCCGGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SHNCRLIVLYVLYKKPTPLSVVS*AAGTGF
Trigger: GAACCCTGTCCCGGCTGCCCAGGACACCACTGACAA...GGGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAGCCGGCAATTATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp TCAGCTGTGATCTGGATACGACAGGGAGACTTGAGAGGACAAAGTCCTCCCTATAACTGGAGGTTCCTCTaGTTGACTTCAGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: SAVIWIRQGDLRGQSPPYNWRFL*LTSGSA
Trigger: CGCAGACCCTGAAGTCAACCAGAGGAACCTCCAGTT...ATAGGGAGGACTTTGTCCTCTCAAGTCTCCCTGTCGTATCCAGATCACAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp GCTAAGGTACGGCAATCTTATTCTGTAAAGCAATCACAAGAGACACCCCAGGCCAGTTTTCTGCTGTGCTaGAGTCCTCCGAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: AKVRQSYSVKQSQETPQASFLLC*SPPRGT
Trigger: AGTCCCCCTCGGAGGACTCCAGCACAGCAGAAAACT...GGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTCTGAGGACATTCAGCTaGGCTCAGAACCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSLRTFS*AQNPCW
Trigger: CCAGCAAGGGTTCTGAGCCCAGCTGAATGTCCTCAG...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CCA 90 bp GGTGCCAACTGGGAGGAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGACTCCTGAAGCACTGTaGTATAGGCCACTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GANWEENVAWLSGFEPRVTPEAL*YRPLSV
Trigger: AACTGAAAGTGGCCTATACCACAGTGCTTCAGGAGT...CACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR TCA 90 bp TCCCATAATTGCCGGCTGATTGTTCTCTATGTTCTTTACAAGAAACCCACACCCCGTGTCCCTGAGGGGTaGCCTAGAAACTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHNCRLIVLYVLYKKPTPRVPEG*PRNFWL
Trigger: GAGCCAGAAGTTTCTAGGTCACCCCTCAGGGACACG...GGGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAGCCGGCAATTATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR GCA 90 bp GAAAAGAATACTTCATTTACGTGTAACACTGTCTTCATGGATGTACCGTGGTCACCAGCTGGCGCAGCTTaGGCAGGGCTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EKNTSFTCNTVFMDVPWSPAGAA*AGLQPS
Trigger: AGATGGCTGGAGCCCTGCGCAAGCTGCGCCAGCTGG...TGACCACGGTACATCCATGAAGACAGTGTTACACGTAAATGAAGTATTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp TCCCATAATTGCCGGCTGATTGTTCTCTATGTTCTTTACAAGAAACCCACACCCATGCTGCTGCTGGCCTaGTGGGCTTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SHNCRLIVLYVLYKKPTPMLLLA*WASCQW
Trigger: CCACTGACAAGAAGCCCACCAGGCCAGCAGCAGCAT...GGGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAGCCGGCAATTATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GAAAAGAATACTTCATTTACGTGTAACACTGTCTTCATGGATGTACCGTGGTCACCTGGAGGCCTGAGCTaGGGACATTCAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EKNTSFTCNTVFMDVPWSPGGLS*GHSAGL
Trigger: GAGCCCAGCTGAATGTCCTCAGCTCAGGCCTCCAGG...TGACCACGGTACATCCATGAAGACAGTGTTACACGTAAATGAAGTATTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CCA 90 bp GGCTTTGTGGAGACCTGCTGTAAAGATGAGGAGACAATAGACACTGTAACATTCCCTCTTTCCTCTTCGTaGCCAAAGAGGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GFVETCCKDEETIDTVTFPLSSS*PKRLCL
Trigger: CAGGCAGAGCCTCTTTGGCCACGAAGAGGAAAGAGG...GAATGTTACAGTGTCTATTGTCTCCTCATCTTTACAGCAGGTCTCCACAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR TCA 90 bp GAAAAGAATACTTCATTTACGTGTAACACTGTCTTCATGGATGTACCGTGGTCATGCTGTCGGCGATGTTaGCCACGTAGTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: EKNTSFTCNTVFMDVPWSCCRRC*PRSPAA
Trigger: GGCTGCTGGACTACGTGGTCAACATCGCCGACAGCA...TGACCACGGTACATCCATGAAGACAGTGTTACACGTAAATGAAGTATTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
3UTR CAA 72 bp GTGGGGAACAGGGAGGTCAGCATAACTTCTTGTAAGTaGGTCATTTCCAAGTCACAGGACATCAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: VGNREVSITSCK*VISKSQDISYQ
Trigger: CTGATAGCTGATGTCCTGTGACTTGGAAATGACCAACTTACAAGAAGTTATGCTGACCTCCCTGTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
3UTR CAA 72 bp TCAGGAACATATGGGCTTCATAGCGAGCGCCTGTACTaGGTCAGTATCACAGTCTCTGTTTACTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SGTYGLHSERLY*VSITVSVYSPL
Trigger: CAAAGGAGAGTAAACAGAGACTGTGATACTGACCAAGTACAGGCGCTCGCTATGAAGCCCATATGTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS CCA 90 bp GGAGCCCGCGGCGCTGGGTGTGAGGGAGCCCAGGCCACCGGACGATaGGGCAGCCGCCTGGTCCTCCAGCCGGCGCCGCGCATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GARGAGCEGAQATGR*GSRLVLQPAPRIQQ
Trigger: CTGCTGGATGCGCGGCGCCGGCTGGAGGACCAGGCGGCTGCCCCATCGTCCGGTGGCCTGGGCTCCCTCACACCCAGCGCCGCGGGCTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp AGAGCACAGAGACTCTGTGGACGTCCACCAGGAGCCCGGGCCCCGTaGCAGGGAACCCAGGCGCGGCCGGCGCTGTACCGCCACCCTGCG +
Preference number: 5 (lower is better)
Translates to: RAQRLCGRPPGARAP*QGTQARPALYRHPA
Trigger: CGCAGGGTGGCGGTACAGCGCCGGCCGCGCCTGGGTTCCCTGCCACGGGGCCCGGGCTCCTGGTGGACGTCCACAGAGTCTCTGTGCTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp GGGCAGCCGCCTGGTCCTCCAGCCGGCGCCGCGCATCCAGCAGCGTaGGCTCCACACGAGGGTTGGAGCCGATTCGGGTCTCCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: GQPPGPPAGAAHPAA*APHEGWSRFGSPRL
Trigger: GAGCCTTGGAGACCCGAATCGGCTCCAACCCTCGTGTGGAGCGCACGCTGCTGGATGCGCGGCGCCGGCTGGAGGACCAGGCGGCTGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 90 bp AGCTTGCGCAGGGCTCCAGCCATCTGCTCGCGCACGTGGGCTAGGTaGCCAGCGCTGGGTGCCACCGGGGTGGACAGGCCGGAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: SLRRAPAICSRTWAR*PALGATGVDRPELR
Trigger: TCGCAGCTCCGGCCTGTCCACCCCGGTGGCACCCAGCGCTGGTCACCTAGCCCACGTGCGCGAGCAGATGGCTGGAGCCCTGCGCAAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp TCGGGTCCTGACGCCACCTCAGGTGCAGGCACACGCTGGGATTCCTaGGAGAGCTGGGGCCCCTCCAGACTGGTCGTGGCCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SGPDATSGAGTRWDS*ESWGPSRLVVATAA
Trigger: GGCTGCAGTGGCCACGACCAGTCTGGAGGGGCCCCAGCTCTCCCAGGAATCCCAGCGTGTGCCTGCACCTGAGGTGGCGTCAGGACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp GGCCTTCAGCCCTGTTCCGTAGGGTTCCAGACTCTGAGCTCGCTGTaGAAGGGCCCCGGCTGCCGTGCTGGCTGCCACCTCCACTTCCCG +
Preference number: 5 (lower is better)
Translates to: GLQPCSVGFQTLSSL*KGPGCRAGCHLHFP
Trigger: CGGGAAGTGGAGGTGGCAGCCAGCACGGCAGCCGGGGCCCTTGCACAGCGAGCTCAGAGTCTGGAACCCTACGGAACAGGGCTGAAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp CCAGCCGGCGCCGCGCATCCAGCAGCGTGCGCTCCACACGAGGGTTaGAGCCGATTCGGGTCTCCAAGGCTCCGTACTGTGGGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: PAGAAHPAACAPHEG*SRFGSPRLRTVGRS
Trigger: GCTTCTACCCACAGTACGGAGCCTTGGAGACCCGAATCGGCTCCAACCCTCGTGTGGAGCGCACGCTGCTGGATGCGCGGCGCCGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp TCCTCAGGATCGGGTCCTGACGCCACCTCAGGTGCAGGCACACGCTaGGATTCCTGGGAGAGCTGGGGCCCCTCCAGACTGGTCGTGGCC +
Preference number: 5 (lower is better)
Translates to: SSGSGPDATSGAGTR*DSWESWGPSRLVVA
Trigger: GGCCACGACCAGTCTGGAGGGGCCCCAGCTCTCCCAGGAATCCCAGCGTGTGCCTGCACCTGAGGTGGCGTCAGGACCCGATCCTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp AGCCGCGGCCACAGTAGGAGTAGGCCGAGTGCCGGCTGTCCCCACTaGCATCAGAGCACAGAGACTCTGTGGACGTCCACCAGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: SRGHSRSRPSAGCPH*HQSTETLWTSTRSP
Trigger: CGGGCTCCTGGTGGACGTCCACAGAGTCTCTGTGCTCTGATGCCAGTGGGGACAGCCGGCACTCGGCCTACTCCTACTGTGGCCGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp ACAGCTAGGCACAGCCAGCAGGAGCCCGGTGATCTCCTTGTGTCCGTGCTCACAGGTGGGTCTGGCTCCTaGCTGGGGAAGGCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: TARHSQQEPGDLLVSVLTGGSGS*LGKAAG
Trigger: CCCAGCGGCCTTCCCCAGCAAGGAGCCAGACCCACC...TGTGAGCACGGACACAAGGAGATCACCGGGCTCCTGCTGGCTGTGCCTAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS CCA 90 bp AGCCATAGGGCGTTTCCACTGAGTACGGTGGGTCTGGCTCCTTGCTaGGGAAGGCCGCTGGGGAGGCCTGACCAGGGGTTCCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: SHRAFPLSTVGLAPC*GRPLGRPDQGFLGM
Trigger: CATTCCCAGGAACCCCTGGTCAGGCCTCCCCAGCGGCCTTCCCCAGCAAGGAGCCAGACCCACCGTACTCAGTGGAAACGCCCTATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp TGTCAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGCTGGGCTCAGAACCCTaGCTGGTGGCTCCGGGCCCT +
Preference number: 5 (lower is better)
Translates to: CQGSLREVQGLRNAEAEWLGSEP*LVAPGP
Trigger: AGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAG...CCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp GTCCTGGGCAGCCGGGACAGGGTTCTCAGGCTGTACCACAGAGGCTaGAGCAGGGCGTGGATTAACGGAGGAAGGCTCTGTCATCCTGGG +
Preference number: 5 (lower is better)
Translates to: VLGSRDRVLRLYHRG*SRAWINGGRLCHPG
Trigger: CCCAGGATGACAGAGCCTTCCTCCGTTAATCCACGCCCTGCTGCAGCCTCTGTGGTACAGCCTGAGAACCCTGTCCCGGCTGCCCAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp CAGGGTCTGCGGGGTCCTCTTTCCTCTTCGTGGCCAAAGAGGCTCTaGCTGCTCCGTCAGCCGCTTGTGAGTCCTGCGATGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QGLRGPLSSSWPKRL*LLRQPLVSPAMLLL
Trigger: CAGCAGCAGCATCGCAGGACTCACAAGCGGCTGACGGAGCAGGCAGAGCCTCTTTGGCCACGAAGAGGAAAGAGGACCCCGCAGACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp CCCTGGAGGCCTGAGCTGAGGACATTCAGCTGGGCTCAGAACCCTTaGTGGTGGCTCCGGGCCCTCGTTCTCTGTGCTCTCGTGTTCGGA +
Preference number: 5 (lower is better)
Translates to: PWRPELRTFSWAQNP*WWLRALVLCALVFG
Trigger: TCCGAACACGAGAGCACAGAGAACGAGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAGCTGAATGTCCTCAGCTCAGGCCTCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp TGGAGCACTGACAGCTTGACTTGGAGAACGGGGATCAGCTTGACCTaGTCCTCCAGCTGGCGCAGCTTGCGCAGGGCTCCAGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: WSTDSLTWRTGISLT*SSSWRSLRRAPAIC
Trigger: GCAGATGGCTGGAGCCCTGCGCAAGCTGCGCCAGCTGGAGGAGCAGGTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp CTGGGCTCAGAACCCTTGCTGGTGGCTCCGGGCCCTCGTTCTCTGTaGTCTCGTGTTCGGAGTTTTCTGCTGTGCTGGAGTCCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: LGSEPLLVAPGPRSL*SRVRSFLLCWSPPR
Trigger: CCTCGGAGGACTCCAGCACAGCAGAAAACTCCGAACACGAGAGCACAGAGAACGAGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp CGGGACAGGGTTCTCAGGCTGTACCACAGAGGCTGCAGCAGGGCGTaGATTAACGGAGGAAGGCTCTGTCATCCTGGGTGCACCGGTGCA +
Preference number: 5 (lower is better)
Translates to: RDRVLRLYHRGCSRA*INGGRLCHPGCTGA
Trigger: TGCACCGGTGCACCCAGGATGACAGAGCCTTCCTCCGTTAATCCACGCCCTGCTGCAGCCTCTGTGGTACAGCCTGAGAACCCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp TGGCTCCGGGCCCTCGTTCTCTGTGCTCTCGTGTTCGGAGTTTTCTaGTGTGCTGGAGTCCTCCGAGGGGGACTCATACCCGCCATTGAC +
Preference number: 5 (lower is better)
Translates to: WLRALVLCALVFGVF*CAGVLRGGLIPAID
Trigger: GTCAATGGCGGGTATGAGTCCCCCTCGGAGGACTCCAGCACAGCAGAAAACTCCGAACACGAGAGCACAGAGAACGAGGGCCCGGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp TGGAGGCCTGAGCTGAGGACATTCAGCTGGGCTCAGAACCCTTGCTaGTGGCTCCGGGCCCTCGTTCTCTGTGCTCTCGTGTTCGGAGTT +
Preference number: 5 (lower is better)
Translates to: WRPELRTFSWAQNPC*WLRALVLCALVFGV
Trigger: AACTCCGAACACGAGAGCACAGAGAACGAGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAGCTGAATGTCCTCAGCTCAGGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp ACAGCTAGGCACAGCCAGCAGGAGCCCGGTGATCTCCTTGTGTCCGTGCTCACAAGAACGGGGATCAGCTaGACCTGCTCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TARHSQQEPGDLLVSVLTRTGIS*TCSSSW
Trigger: CCAGCTGGAGGAGCAGGTCAAGCTGATCCCCGTTCT...TGTGAGCACGGACACAAGGAGATCACCGGGCTCCTGCTGGCTGTGCCTAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GCGGGAAGGAGAGGAGAGACTGGTGGGTGTTTGGCCCTGGTGGCCCCGACAGAGAGAAACTTCTGGCTCTaGAGCTGCACGGTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: AGRRGETGGCLALVAPTERNFWL*SCTVSC
Trigger: ACAGCTCACCGTGCAGCTCAAGAGCCAGAAGTTTCT...CTCTGTCGGGGCCACCAGGGCCAAACACCCACCAGTCTCTCCTCTCCTTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS TCA 90 bp CCAGTGGTAGCTGTGGGCAGTGGGCACATGGTCTCCACCACTTCATaGCTGCGGAACACGAGGGTGTTCTCTGGTCCCCCAGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: PVVAVGSGHMVSTTS*LRNTRVFSGPPDVV
Trigger: GACCACATCTGGGGGACCAGAGAACACCCTCGTGTTCCGCAGTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCACAGCTACCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp GGTCTCCAACACGGCCACTTTAGCTACCAGGGCAGCTTCACCATCTaGAATGCCCAAGTCCCGTTCTCTAACCCAGGTGCCCACCGAGCG +
Preference number: 5 (lower is better)
Translates to: GLQHGHFSYQGSFTI*NAQVPFSNPGAHRA
Trigger: CGCTCGGTGGGCACCTGGGTTAGAGAACGGGACTTGGGCATTCCAGATGGTGAAGCTGCCCTGGTAGCTAAAGTGGCCGTGTTGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp CATGGTCTCCACCACTTCATGACTGCGGAACACGAGGGTGTTCTCTaGTCCCCCAGATGTGGTCAGGGCCTTCAGCCCTGTTCCGTAGGG +
Preference number: 5 (lower is better)
Translates to: HGLHHFMTAEHEGVL*SPRCGQGLQPCSVG
Trigger: CCCTACGGAACAGGGCTGAAGGCCCTGACCACATCTGGGGGACCAGAGAACACCCTCGTGTTCCGCAGTCATGAAGTGGTGGAGACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp AGGCCTGAGCTGAGGACATTCAGCTGGGCTCAGAACCCTTGCTGGTaGCTCCGGGCCCTCGTTCTCTGTGCTCTCGTGTTCGGAGTTTTC +
Preference number: 5 (lower is better)
Translates to: RPELRTFSWAQNPCW*LRALVLCALVFGVF
Trigger: GAAAACTCCGAACACGAGAGCACAGAGAACGAGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAGCTGAATGTCCTCAGCTCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GGATGGAGGAGGGACGGTTTGATGCGTGGCTTGTGGCTGGTGGGTCCTGGGGGATCCTGTAGCGCTTTTTaGAGCTGGGTCTCCAACACG +
Preference number: 5 (lower is better)
Translates to: GWRRDGLMRGLWLVGPGGSCSAF*SWVSNT
Trigger: CGTGTTGGAGACCCAGCTCAAAAAAGCGCTACAGGA...TCCCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp CAGGGCTCCCTCAGGGAAGTTCAGGGGCTGAGGAATGCCGAGGCAGAATGGGACCGCTCTGTGAGGGCATaGGGGTTCTCCAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: QGSLREVQGLRNAEAEWDRSVRA*GFSRYF
Trigger: GAAATACCTGGAGAACCCCAATGCCCTCACAGAGCG...GTCCCATTCTGCCTCGGCATTCCTCAGCCCCTGAACTTCCCTGAGGGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CAA 90 bp ACCCAGGGTGCTGGGAAAGGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCAGCCCGGTGATCTCCTaGTGTCCGTGCTCACATGCA +
Preference number: 5 (lower is better)
Translates to: TQGAGKGFQELEPGRCQGSPVIS*CPCSHA
Trigger: TGCATGTGAGCACGGACACAAGGAGATCACCGGGCT...GCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCCTTTCCCAGCACCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS CCA 90 bp ACGGTGAGCTGTCTCTTTTCCTCCTGGAGCACTGACAGCTTGACTTaGAGAACGGGGATCAGCTTGACCTGCTCCTCCAGCTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: TVSCLFSSWSTDSLT*RTGISLTCSSSWRS
Trigger: GCTGCGCCAGCTGGAGGAGCAGGTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACAGCTCACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp CTTCATGACTGCGGAACACGAGGGTGTTCTCTGGTCCCCCAGATGTaGTCAGGGCCTTCAGCCCTGTTCCGTAGGGTTCCAGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: LHDCGTRGCSLVPQM*SGPSALFRRVPDSE
Trigger: CTCAGAGTCTGGAACCCTACGGAACAGGGCTGAAGGCCCTGACCACATCTGGGGGACCAGAGAACACCCTCGTGTTCCGCAGTCATGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GGCTTCCAGGAGCTTGAGCCTGGTAGATGTCAGGGCTCCCTCAGGGAAGTTCAGTTGGCTGTGTGCACATaGCCAGTGGTAGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GFQELEPGRCQGSLREVQLAVCT*PVVAVG
Trigger: GCCCACAGCTACCACTGGCAATGTGCACACAGCCAA...CTGAACTTCCCTGAGGGAGCCCTGACATCTACCAGGCTCAAGCTCCTGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GGTGCCAACTGGGAGGAGAATGTAGCTTGGCTTTCTGGCTTTGAACCCAGGGTGGGCCTGGTGGGCTTCTaGTCAGTGGTGTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GANWEENVAWLSGFEPRVGLVGF*SVVSWA
Trigger: TGCCCAGGACACCACTGACAAGAAGCCCACCAGGCC...CACCCTGGGTTCAAAGCCAGAAAGCCAAGCTACATTCTCCTCCCAGTTGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 90 bp GCTCTTGAGCTGCACGGTGAGCTGTCTCTTTTCCTCCTGGAGCACTaGCAGCTTGACTTGGAGAACGGGGATCAGCTTGACCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ALELHGELSLFLLEH*QLDLENGDQLDLLL
Trigger: GAGGAGCAGGTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACAGCTCACCGTGCAGCTCAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp GCACCGGTGCAACTCCGTTCTGTAATGCTGATCTTCTTGGCTGTGTaGACATTGCCAGTGGTAGCTGTGGGCAGTGGGCACATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: APVQLRSVMLIFLAV*TLPVVAVGSGHMVS
Trigger: GGAGACCATGTGCCCACTGCCCACAGCTACCACTGGCAATGTGCACACAGCCAAGAAGATCAGCATTACAGAACGGAGTTGCACCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 90 bp ATTGACTCCCACAAACTGGAGGTTCCTCTGGTTGACTTCAGGGTCTaGGGGGTCCTCTTTCCTCTTCGTGGCCAAAGAGGCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: IDSHKLEVPLVDFRV*GVLFPLRGQRGSAC
Trigger: GCAGGCAGAGCCTCTTTGGCCACGAAGAGGAAAGAGGACCCCGCAGACCCTGAAGTCAACCAGAGGAACCTCCAGTTTGTGGGAGTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 90 bp GATCTTCTTGGCTGTGTGCACATTGCCAGTGGTAGCTGTGGGCAGTaGGCACATGGTCTCCACCACTTCATGACTGCGGAACACGAGGGT +
Preference number: 5 (lower is better)
Translates to: DLLGCVHIASGSCGQ*AHGLHHFMTAEHEG
Trigger: ACCCTCGTGTTCCGCAGTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCACAGCTACCACTGGCAATGTGCACACAGCCAAGAAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCTATTGTACACTAGACAAGGCCTGGTGGGCTTCTaGTCAGTGGTGTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: DTVWRWRAVDKTLLYTRQGLVGF*SVVSWA
Trigger: TGCCCAGGACACCACTGACAAGAAGCCCACCAGGCC...TTGTCTAGTGTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GCTAAGGTACGGCAATCTTATTCTGTAAAGCAATCACAAGAGACACCCCAGGCCCTGGGCTCAGAACCCTaGCTGGTGGCTCCGGGCCCT +
Preference number: 5 (lower is better)
Translates to: AKVRQSYSVKQSQETPQALGSEP*LVAPGP
Trigger: AGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAG...GGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GGCCCTGAAGACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCTATTGTACAGGGCAGTGTTACCATaGCTGTCGGCGATGTTGACC +
Preference number: 5 (lower is better)
Translates to: GPEDTVWRWRAVDKTLLYRAVLP*LSAMLT
Trigger: GGTCAACATCGCCGACAGCAATGGTAACACTGCCCT...GTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS TCA 90 bp GAGGGCATTGGGGTTCTCCAGGTATTTCTCCAGGGCCAAGCAGGCTaGTATGAGGTCAGGGCTCAGATCCATCCGAATTTCCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: EGIGVLQVFLQGQAG*YEVRAQIHPNFLLR
Trigger: CCTGAGGAGGAAATTCGGATGGATCTGAGCCCTGACCTCATATCAGCCTGCTTGGCCCTGGAGAAATACCTGGAGAACCCCAATGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CAA 90 bp TTTTCTGAGGAGCGTGTGCTTTGGGTCATAGCTGATGCTTCCAGAACCTTAAATGGTGGGTCTGGCTCCTaGCTGGGGAAGGCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: FSEERVLWVIADASRTLNGGSGS*LGKAAG
Trigger: CCCAGCGGCCTTCCCCAGCAAGGAGCCAGACCCACC...ATTTAAGGTTCTGGAAGCATCAGCTATGACCCAAAGCACACGCTCCTCAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CAA 90 bp GGCAGTGTTACCATTGCTGTCGGCGATGTTGACCACGTAGTCCAGCAGCCGGGCGTAATGCTGATCTTCTaGGCTGTGTGCACATTGCCA +
Preference number: 5 (lower is better)
Translates to: GSVTIAVGDVDHVVQQPGVMLIF*AVCTLP
Trigger: TGGCAATGTGCACACAGCCAAGAAGATCAGCATTAC...GCCCGGCTGCTGGACTACGTGGTCAACATCGCCGACAGCAATGGTAACACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS TCA 90 bp CATTGGGGTTCTCCAGGTATTTCTCCAGGGCCAAGCAGGCTGATATaGGGTCAGGGCTCAGATCCATCCGAATTTCCTCCTCAGGATCGG +
Preference number: 5 (lower is better)
Translates to: HWGSPGISPGPSRLI*GQGSDPSEFPPQDR
Trigger: CCGATCCTGAGGAGGAAATTCGGATGGATCTGAGCCCTGACCTCATATCAGCCTGCTTGGCCCTGGAGAAATACCTGGAGAACCCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS CCA 90 bp AACTTCTGGCTCTTGAGCTGCACGGTGAGCTGTCTCTTTTCCTCCTaGAGCACTGACAGCTTGACTTGGAGAACGGGGATCAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: NFWLLSCTVSCLFSS*STDSLTWRTGISLT
Trigger: GGTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACAGCTCACCGTGCAGCTCAAGAGCCAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GACTCCATCATGACATCTACCCACCAGCCAACCCAGTTTCTCATCCATTGCTCAAGAACGGGGATCAGCTaGACCTGCTCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: DSIMTSTHQPTQFLIHCSRTGIS*TCSSSW
Trigger: CCAGCTGGAGGAGCAGGTCAAGCTGATCCCCGTTCT...TGAGCAATGGATGAGAAACTGGGTTGGCTGGTGGGTAGATGTCATGATGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CAA 90 bp GGTCTGAAAGTATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGATTGGCTGTGTGCACATaGCCAGTGGTAGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GLKVFLEVVSSAKHSPWGLAVCT*PVVAVG
Trigger: GCCCACAGCTACCACTGGCAATGTGCACACAGCCAA...TCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAATACTTTCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp GACACAGTCTGGAGGTGGAGGGCAGTGGACAAGACCCTATTGTACACTAGACAATCCTGTAGCGCTTTTTaGAGCTGGGTCTCCAACACG +
Preference number: 5 (lower is better)
Translates to: DTVWRWRAVDKTLLYTRQSCSAF*SWVSNT
Trigger: CGTGTTGGAGACCCAGCTCAAAAAAGCGCTACAGGA...TTGTCTAGTGTACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTTGGCTGGCTTTGGCATaGACATTCCCAAGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSWLALA*TFPSRK
Trigger: CTTCCGGCTTGGGAATGTCAATGCCAAAGCCAGCCA...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS-3UTR CAA 90 bp GGTCTGAAAGTATTTCTAGAAGTAGTCTCCTCTGCCAAGCACTCCCCGTGGGGAGTAATGCTGATCTTCTaGGCTGTGTGCACATTGCCA +
Preference number: 5 (lower is better)
Translates to: GLKVFLEVVSSAKHSPWGVMLIF*AVCTLP
Trigger: TGGCAATGTGCACACAGCCAAGAAGATCAGCATTAC...TCCCCACGGGGAGTGCTTGGCAGAGGAGACTACTTCTAGAAATACTTTCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS-3UTR CAA 90 bp AAAACACTGCTTTCTGACTGGAGGCAGGCGGCTAAGGTACGGCAATCTTATTCTGGAGCGAACGAGCACTaGATGTTCATGCGTGAGTAC +
Preference number: 5 (lower is better)
Translates to: KTLLSDWRQAAKVRQSYSGANEH*MFMREY
Trigger: GTACTCACGCATGAACATCAAGTGCTCGTTCGCTCC...AGAATAAGATTGCCGTACCTTAGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS CCA 72 bp GGCGCTGGGTGTGAGGGAGCCCAGGCCACCGGACGATaGGGCAGCCGCCTGGTCCTCCAGCCGGCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: GAGCEGAQATGR*GSRLVLQPAPR
Trigger: GCGCGGCGCCGGCTGGAGGACCAGGCGGCTGCCCCATCGTCCGGTGGCCTGGGCTCCCTCACACCCAGCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp AGACTCTGTGGACGTCCACCAGGAGCCCGGGCCCCGTaGCAGGGAACCCAGGCGCGGCCGGCGCTGTACCGC +
Preference number: 6 (lower is better)
Translates to: RLCGRPPGARAP*QGTQARPALYR
Trigger: GCGGTACAGCGCCGGCCGCGCCTGGGTTCCCTGCCACGGGGCCCGGGCTCCTGGTGGACGTCCACAGAGTCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 72 bp AGGGCTCCAGCCATCTGCTCGCGCACGTGGGCTAGGTaGCCAGCGCTGGGTGCCACCGGGGTGGACAGGCCG +
Preference number: 6 (lower is better)
Translates to: RAPAICSRTWAR*PALGATGVDRP
Trigger: CGGCCTGTCCACCCCGGTGGCACCCAGCGCTGGTCACCTAGCCCACGTGCGCGAGCAGATGGCTGGAGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp CCTGGTCCTCCAGCCGGCGCCGCGCATCCAGCAGCGTaGGCTCCACACGAGGGTTGGAGCCGATTCGGGTCT +
Preference number: 6 (lower is better)
Translates to: PGPPAGAAHPAA*APHEGWSRFGS
Trigger: AGACCCGAATCGGCTCCAACCCTCGTGTGGAGCGCACGCTGCTGGATGCGCGGCGCCGGCTGGAGGACCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp GACTCTGAGCTCGCTGTGCAAGGGCCCCGGCTGCCGTaGTGGCTGCCACCTCCACTTCCCGGGGACCCTCCA +
Preference number: 6 (lower is better)
Translates to: DSELAVQGPRLP*WLPPPLPGDPP
Trigger: TGGAGGGTCCCCGGGAAGTGGAGGTGGCAGCCAGCACGGCAGCCGGGGCCCTTGCACAGCGAGCTCAGAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp TCTGAGCTCGCTGTGCAAGGGCCCCGGCTGCCGTGCTaGCTGCCACCTCCACTTCCCGGGGACCCTCCACTA +
Preference number: 6 (lower is better)
Translates to: SELAVQGPRLPC*LPPPLPGDPPL
Trigger: TAGTGGAGGGTCCCCGGGAAGTGGAGGTGGCAGCCAGCACGGCAGCCGGGGCCCTTGCACAGCGAGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp AGGGCGTTTCCACTGAGTACGGTGGGTCTGGCTCCTTaGTGGGGAAGGCCGCTGGGGAGGCCTGACCAGGGG +
Preference number: 6 (lower is better)
Translates to: RAFPLSTVGLAP*WGRPLGRPDQG
Trigger: CCCCTGGTCAGGCCTCCCCAGCGGCCTTCCCCAGCAAGGAGCCAGACCCACCGTACTCAGTGGAAACGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp GGGAACCCAGGCGCGGCCGGCGCTGTACCGCCACCCTaGGCAGTGTGTGGCCCTTCTCAATGTCATCCACGT +
Preference number: 6 (lower is better)
Translates to: GNPGAAGAVPPP*AVCGPSQCHPR
Trigger: ACGTGGATGACATTGAGAAGGGCCACACACTGCGCAGGGTGGCGGTACAGCGCCGGCCGCGCCTGGGTTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp CCCTGTTCCGTAGGGTTCCAGACTCTGAGCTCGCTGTaGAAGGGCCCCGGCTGCCGTGCTGGCTGCCACCTC +
Preference number: 6 (lower is better)
Translates to: PCSVGFQTLSSL*KGPGCRAGCHL
Trigger: GAGGTGGCAGCCAGCACGGCAGCCGGGGCCCTTGCACAGCGAGCTCAGAGTCTGGAACCCTACGGAACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp TCAGGTGCAGGCACACGCTGGGATTCCTGGGAGAGCTaGGGCCCCTCCAGACTGGTCGTGGCCACTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SGAGTRWDSWES*GPSRLVVATAA
Trigger: GGCTGCAGTGGCCACGACCAGTCTGGAGGGGCCCCAGCTCTCCCAGGAATCCCAGCGTGTGCCTGCACCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp GCGTTTCCACTGAGTACGGTGGGTCTGGCTCCTTGCTaGGGAAGGCCGCTGGGGAGGCCTGACCAGGGGTTC +
Preference number: 6 (lower is better)
Translates to: AFPLSTVGLAPC*GRPLGRPDQGF
Trigger: GAACCCCTGGTCAGGCCTCCCCAGCGGCCTTCCCCAGCAAGGAGCCAGACCCACCGTACTCAGTGGAAACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp GCCGCGCATCCAGCAGCGTGCGCTCCACACGAGGGTTaGAGCCGATTCGGGTCTCCAAGGCTCCGTACTGTG +
Preference number: 6 (lower is better)
Translates to: AAHPAACAPHEG*SRFGSPRLRTV
Trigger: CACAGTACGGAGCCTTGGAGACCCGAATCGGCTCCAACCCTCGTGTGGAGCGCACGCTGCTGGATGCGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CAA 72 bp CGCCGCGCATCCAGCAGCGTGCGCTCCACACGAGGGTaGGAGCCGATTCGGGTCTCCAAGGCTCCGTACTGT +
Preference number: 6 (lower is better)
Translates to: RRASSSVRSTRG*EPIRVSKAPYC
Trigger: ACAGTACGGAGCCTTGGAGACCCGAATCGGCTCCAACCCTCGTGTGGAGCGCACGCTGCTGGATGCGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 72 bp GGCCAAAGAGGCTCTGCCTGCTCCGTCAGCCGCTTGTaGGTCCTGCGATGCTGCTGCTGGCCTGGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: GQRGSACSVSRL*VLRCCCWPGGL
Trigger: AAGCCCACCAGGCCAGCAGCAGCATCGCAGGACTCACAAGCGGCTGACGGAGCAGGCAGAGCCTCTTTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp GCGATGCTGCTGCTGGCCTGGTGGGCTTCTTGTCAGTaGTGTCCTGGGCAGCCGGGACAGGGTTCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: AMLLLAWWASCQ*CPGQPGQGSQA
Trigger: AGCCTGAGAACCCTGTCCCGGCTGCCCAGGACACCACTGACAAGAAGCCCACCAGGCCAGCAGCAGCATCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp CCGCTTGTGAGTCCTGCGATGCTGCTGCTGGCCTGGTaGGCTTCTTGTCAGTGGTGTCCTGGGCAGCCGGGA +
Preference number: 6 (lower is better)
Translates to: PLVSPAMLLLAW*ASCQWCPGQPG
Trigger: TCCCGGCTGCCCAGGACACCACTGACAAGAAGCCCACCAGGCCAGCAGCAGCATCGCAGGACTCACAAGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CAA 72 bp GAGTCCTGCGATGCTGCTGCTGGCCTGGTGGGCTTCTaGTCAGTGGTGTCCTGGGCAGCCGGGACAGGGTTC +
Preference number: 6 (lower is better)
Translates to: ESCDAAAGLVGF*SVVSWAAGTGF
Trigger: GAACCCTGTCCCGGCTGCCCAGGACACCACTGACAAGAAGCCCACCAGGCCAGCAGCAGCATCGCAGGACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp GAGGCTCTGCCTGCTCCGTCAGCCGCTTGTGAGTCCTaGGATGCTGCTGCTGGCCTGGTGGGCTTCTTGTCA +
Preference number: 6 (lower is better)
Translates to: EALPAPSAACES*DAAAGLVGFLS
Trigger: TGACAAGAAGCCCACCAGGCCAGCAGCAGCATCGCAGGACTCACAAGCGGCTGACGGAGCAGGCAGAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp GCTGCTGGCCTGGTGGGCTTCTTGTCAGTGGTGTCCTaGGCAGCCGGGACAGGGTTCTCAGGCTGTACCACA +
Preference number: 6 (lower is better)
Translates to: AAGLVGFLSVVS*AAGTGFSGCTT
Trigger: TGTGGTACAGCCTGAGAACCCTGTCCCGGCTGCCCAGGACACCACTGACAAGAAGCCCACCAGGCCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp GACAGCTTGACTTGGAGAACGGGGATCAGCTTGACCTaGTCCTCCAGCTGGCGCAGCTTGCGCAGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: DSLTWRTGISLT*SSSWRSLRRAP
Trigger: TGGAGCCCTGCGCAAGCTGCGCCAGCTGGAGGAGCAGGTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp CGGGGTCCTCTTTCCTCTTCGTGGCCAAAGAGGCTCTaGCTGCTCCGTCAGCCGCTTGTGAGTCCTGCGATG +
Preference number: 6 (lower is better)
Translates to: RGPLSSSWPKRL*LLRQPLVSPAM
Trigger: CATCGCAGGACTCACAAGCGGCTGACGGAGCAGGCAGAGCCTCTTTGGCCACGAAGAGGAAAGAGGACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp CCTGAGCTGAGGACATTCAGCTGGGCTCAGAACCCTTaGTGGTGGCTCCGGGCCCTCGTTCTCTGTGCTCTC +
Preference number: 6 (lower is better)
Translates to: PELRTFSWAQNP*WWLRALVLCAL
Trigger: GAGAGCACAGAGAACGAGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAGCTGAATGTCCTCAGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp CACAGTAGGAGTAGGCCGAGTGCCGGCTGTCCCCACTaGCATCAGAGCACAGAGACTCTGTGGACGTCCACC +
Preference number: 6 (lower is better)
Translates to: HSRSRPSAGCPH*HQSTETLWTST
Trigger: GGTGGACGTCCACAGAGTCTCTGTGCTCTGATGCCAGTGGGGACAGCCGGCACTCGGCCTACTCCTACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp GAGCTGAGGACATTCAGCTGGGCTCAGAACCCTTGCTaGTGGCTCCGGGCCCTCGTTCTCTGTGCTCTCGTG +
Preference number: 6 (lower is better)
Translates to: ELRTFSWAQNPC*WLRALVLCALV
Trigger: CACGAGAGCACAGAGAACGAGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAGCTGAATGTCCTCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 72 bp AGGCAGAGCTCACTCCGGCTCCGTGTCCCTGAGGGGTaGCCTAGAAACTTCTGGCTCTTGAGCTGCACGGTG +
Preference number: 6 (lower is better)
Translates to: RQSSLRLRVPEG*PRNFWLLSCTV
Trigger: CACCGTGCAGCTCAAGAGCCAGAAGTTTCTAGGTCACCCCTCAGGGACACGGAGCCGGAGTGAGCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 72 bp GCTGTGGGCAGTGGGCACATGGTCTCCACCACTTCATaGCTGCGGAACACGAGGGTGTTCTCTGGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: AVGSGHMVSTTS*LRNTRVFSGPP
Trigger: TGGGGGACCAGAGAACACCCTCGTGTTCCGCAGTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp AGCCGGGACAGGGTTCTCAGGCTGTACCACAGAGGCTaGAGCAGGGCGTGGATTAACGGAGGAAGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: SRDRVLRLYHRG*SRAWINGGRLC
Trigger: ACAGAGCCTTCCTCCGTTAATCCACGCCCTGCTGCAGCCTCTGTGGTACAGCCTGAGAACCCTGTCCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 72 bp CAGATCCATCCGAATTTCCTCCTCAGGATCGGGTCCTaGCGCCACCTCAGGTGCAGGCACACGCTGGGATTC +
Preference number: 6 (lower is better)
Translates to: QIHPNFLLRIGS*RHLRCRHTLGF
Trigger: GAATCCCAGCGTGTGCCTGCACCTGAGGTGGCGTCAGGACCCGATCCTGAGGAGGAAATTCGGATGGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7
CDS TCA 72 bp AGGCCACTTTCGAATTTCCTCCTCAGGATCGGGTCCTaGCGCCACCTCAGGTGCAGGCACACGCTGGGATTC +
Preference number: 6 (lower is better)
Translates to: RPLSNFLLRIGS*RHLRCRHTLGF
Trigger: GAATCCCAGCGTGTGCCTGCACCTGAGGTGGCGTCAGGACCCGATCCTGAGGAGGAAATTCGAAAGTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS GCA 72 bp TGGGCAGTGGGCACATGGTCTCCACCACTTCATGACTaGGGAACACGAGGGTGTTCTCTGGTCCCCCAGATG +
Preference number: 6 (lower is better)
Translates to: WAVGTWSPPLHD*GTRGCSLVPQM
Trigger: CATCTGGGGGACCAGAGAACACCCTCGTGTTCCGCAGTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp GAACCCTTGCTGGTGGCTCCGGGCCCTCGTTCTCTGTaGTCTCGTGTTCGGAGTTTTCTGCTGTGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: EPLLVAPGPRSL*SRVRSFLLCWS
Trigger: ACTCCAGCACAGCAGAAAACTCCGAACACGAGAGCACAGAGAACGAGGGCCCGGAGCCACCAGCAAGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp CACCACTTCATGACTGCGGAACACGAGGGTGTTCTCTaGTCCCCCAGATGTGGTCAGGGCCTTCAGCCCTGT +
Preference number: 6 (lower is better)
Translates to: HHFMTAEHEGVL*SPRCGQGLQPC
Trigger: ACAGGGCTGAAGGCCCTGACCACATCTGGGGGACCAGAGAACACCCTCGTGTTCCGCAGTCATGAAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp GTTCTCAGGCTGTACCACAGAGGCTGCAGCAGGGCGTaGATTAACGGAGGAAGGCTCTGTCATCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: VLRLYHRGCSRA*INGGRLCHPGC
Trigger: GCACCCAGGATGACAGAGCCTTCCTCCGTTAATCCACGCCCTGCTGCAGCCTCTGTGGTACAGCCTGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CAA 90 bp AGCTGCACGGTGAGCTGTCTCTTTTCCTCCTGGAGCACTGACAGCTaGACTTGGAGAACGGGGATCAGCTTGACCTGCTCCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SCTVSCLFSSWSTDS*TWRTGISLTCSSSW
Trigger: CCAGCTGGAGGAGCAGGTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACAGCTCACCGTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp CGTTCTCTGTGCTCTCGTGTTCGGAGTTTTCTGCTGTaGTGGAGTCCTCCGAGGGGGACTCATACCCGCCAT +
Preference number: 6 (lower is better)
Translates to: RSLCSRVRSFLL*WSPPRGTHTRH
Trigger: ATGGCGGGTATGAGTCCCCCTCGGAGGACTCCAGCACAGCAGAAAACTCCGAACACGAGAGCACAGAGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp GGCTGTGTGCACATTGCCAGTGGTAGCTGTGGGCAGTaGGCACATGGTCTCCACCACTTCATGACTGCGGAA +
Preference number: 6 (lower is better)
Translates to: GCVHIASGSCGQ*AHGLHHFMTAE
Trigger: TTCCGCAGTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCACAGCTACCACTGGCAATGTGCACACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp TGCGGCAGGCCAGGCGCAGCCACTCCTGAAGCACTGTaGTATAGGCCACTTTCGAATTTCCTCCTCAGGATC +
Preference number: 6 (lower is better)
Translates to: CGRPGAATPEAL*YRPLSNFLLRI
Trigger: GATCCTGAGGAGGAAATTCGAAAGTGGCCTATACCACAGTGCTTCAGGAGTGGCTGCGCCTGGCCTGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216008.2
CDS CAA 72 bp GTGCTGGAGTCCTCCGAGGGGGACTCATACCCGCCATaGACTCCCACAAACTGGAGGTTCCTCTGGTTGACT +
Preference number: 6 (lower is better)
Translates to: VLESSEGDSYPP*TPTNWRFLWLT
Trigger: AGTCAACCAGAGGAACCTCCAGTTTGTGGGAGTCAATGGCGGGTATGAGTCCCCCTCGGAGGACTCCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CAA 90 bp ATCCTGGGTGCACCGGTGCAACTCCGTTCTGTAATGCTGATCTTCTaGGCTGTGTGCACATTGCCAGTGGTAGCTGTGGGCAGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: ILGAPVQLRSVMLIF*AVCTLPVVAVGSGH
Trigger: GTGCCCACTGCCCACAGCTACCACTGGCAATGTGCACACAGCCAAGAAGATCAGCATTACAGAACGGAGTTGCACCGGTGCACCCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp CACAAACTGGAGGTTCCTCTGGTTGACTTCAGGGTCTaGGGGGTCCTCTTTCCTCTTCGTGGCCAAAGAGGC +
Preference number: 6 (lower is better)
Translates to: HKLEVPLVDFRV*GVLFPLRGQRG
Trigger: GCCTCTTTGGCCACGAAGAGGAAAGAGGACCCCGCAGACCCTGAAGTCAACCAGAGGAACCTCCAGTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CAA 90 bp TTTTCTGCTGTGCTGGAGTCCTCCGAGGGGGACTCATACCCGCCATaGACTCCCACAAACTGGAGGTTCCTCTGGTTGACTTCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: FSAVLESSEGDSYPP*TPTNWRFLWLTSGS
Trigger: AGACCCTGAAGTCAACCAGAGGAACCTCCAGTTTGTGGGAGTCAATGGCGGGTATGAGTCCCCCTCGGAGGACTCCAGCACAGCAGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 72 bp CTGCACGGTGAGCTGTCTCTTTTCCTCCTGGAGCACTaGCAGCTTGACTTGGAGAACGGGGATCAGCTTGAC +
Preference number: 6 (lower is better)
Translates to: LHGELSLFLLEH*QLDLENGDQLD
Trigger: GTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACAGCTCACCGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp TGTCTCTTTTCCTCCTGGAGCACTGACAGCTTGACTTaGAGAACGGGGATCAGCTTGACCTGCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: CLFSSWSTDSLT*RTGISLTCSSS
Trigger: GCTGGAGGAGCAGGTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CCA 72 bp CTCTTGAGCTGCACGGTGAGCTGTCTCTTTTCCTCCTaGAGCACTGACAGCTTGACTTGGAGAACGGGGATC +
Preference number: 6 (lower is better)
Translates to: LLSCTVSCLFSS*STDSLTWRTGI
Trigger: GATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACAGCTCACCGTGCAGCTCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CAA 72 bp GTGAGCTGTCTCTTTTCCTCCTGGAGCACTGACAGCTaGACTTGGAGAACGGGGATCAGCTTGACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: VSCLFSSWSTDS*TWRTGISLTCS
Trigger: GGAGCAGGTCAAGCTGATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS CAA 72 bp GCACCGGTGCAACTCCGTTCTGTAATGCTGATCTTCTaGGCTGTGTGCACATTGCCAGTGGTAGCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: APVQLRSVMLIF*AVCTLPVVAVG
Trigger: GCCCACAGCTACCACTGGCAATGTGCACACAGCCAAGAAGATCAGCATTACAGAACGGAGTTGCACCGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS GCA 72 bp CAACTCCGTTCTGTAATGCTGATCTTCTTGGCTGTGTaGACATTGCCAGTGGTAGCTGTGGGCAGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: QLRSVMLIFLAV*TLPVVAVGSGH
Trigger: GTGCCCACTGCCCACAGCTACCACTGGCAATGTGCACACAGCCAAGAAGATCAGCATTACAGAACGGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034717.7
ENSMUST00000216008.2
CDS TCA 72 bp TCTCCAGGTATTTCTCCAGGGCCAAGCAGGCTGATATaGGGTCAGGGCTCAGATCCATCCGAATTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SPGISPGPSRLI*GQGSDPSEFPP
Trigger: AGGAGGAAATTCGGATGGATCTGAGCCCTGACCTCATATCAGCCTGCTTGGCCCTGGAGAAATACCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034717.7