Pregenerated sensors for JUND (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071076Ensembl transcript IDs: ENSMUST00000095267.8
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACTTTACTGAAAACACAAAACCGGCGAACCAAGGATTACGGAACAGGAATGTGGCGAGGGCGGGGGTCGTaGGCTCGGGTTCCCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: TLLKTQNRRTKDYGTGMWRGRGS*ARVPHP Trigger: TGGATGGGGAACCCGAGCGCACGACCCCCGCCCTCG...CCACATTCCTGTTCCGTAATCCTTGGTTCGCCGGTTTTGTGTTTTCAGTAAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| 3UTR-3UTR CAA 90 bp | ACTTTACTGAAAACACAAAACCGGCGAACCAAGGATTACGGAACAGGAATGTGGACACGCAACCAACGTTaGTTCCCGAGTAGAAACATA | + |
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Preference number: 3 (lower is better) Translates to: TLLKTQNRRTKDYGTGMWTRNQR*FPSRNI Trigger: TATGTTTCTACTCGGGAACAAACGTTGGTTGCGTGT...CCACATTCCTGTTCCGTAATCCTTGGTTCGCCGGTTTTGTGTTTTCAGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR GCA 90 bp | GTAGAGAGGCGGCGCGAGGGCGGGGGTCGTGCGCTCGGGTTCCCCATCCAGAGTACGTCCGGCACGGTCTaGGGCTCGTCCTTGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: VERRREGGGRALGFPIQSTSGTV*GSSLSA Trigger: CGCGCTCAAGGACGAGCCGCAGACCGTGCCGGACGT...ACTCTGGATGGGGAACCCGAGCGCACGACCCCCGCCCTCGCGCCGCCTCTCTAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR GCA 90 bp | GTAGAGAGGCGGCGCGAGGGCGGGGGTCGTGCGCTCGGGTTCCCCATCCAGAGTCCTTCGGCGAACTCCTaGTCCTCGCTAGCTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: VERRREGGGRALGFPIQSPSANS*SSLAAT Trigger: GGTGGCAGCTAGCGAGGAGCAGGAGTTCGCCGAAGG...ACTCTGGATGGGGAACCCGAGCGCACGACCCCCGCCCTCGCGCCGCCTCTCTAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGGCGGCGCGAGGGCGGGGGTCGTGCGCTCGGGTTCCCCATCCAGAGTTGCGCTTGCGGCATTTaGAGGCGGCGATGCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VERRREGGGRALGFPIQSCACGI*RRRCGC Trigger: GCAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCA...ACTCTGGATGGGGAACCCGAGCGCACGACCCCCGCCCTCGCGCCGCCTCTCTAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR TCA 90 bp | AGAGGCGGCGCGAGGGCGGGGGTCGTGCGCTCGGGTTCCCCATCCAGAGTTAAGGCCCGTTGGACTGGATaGTCAGCCTCTCCAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RGGARAGVVRSGSPSRVKARWTG*SASPAP Trigger: CGGAGCTGGAGAGGCTGATCATCCAGTCCAACGGGC...CTTAACTCTGGATGGGGAACCCGAGCGCACGACCCCCGCCCTCGCGCCGCCTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CCA 90 bp | AGAGGCGGCGCGAGGGCGGGGGTCGTGCGCTCGGGTTCCCCATCCAGAGTTAAGGCCAGCTCGGTGTTCTaGCTTTTGAGGGTCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: RGGARAGVVRSGSPSRVKASSVF*LLRVLT Trigger: AGTCAAGACCCTCAAAAGCCAGAACACCGAGCTGGC...CTTAACTCTGGATGGGGAACCCGAGCGCACGACCCCCGCCCTCGCGCCGCCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CCA 90 bp | AGAGGCGGCGCGAGGGCGGGGGTCGTGCGCTCGGGTTCCCCATCCAGAGTTAAGCAGCCGCTGTTGACGTaGCTGAGGACTTTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGGARAGVVRSGSPSRVKQPLLT*LRTFCL Trigger: CAAACAGAAAGTCCTCAGCCACGTCAACAGCGGCTG...CTTAACTCTGGATGGGGAACCCGAGCGCACGACCCCCGCCCTCGCGCCGCCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CCA 90 bp | CAACACAAGGAAACACACACTCAACACGCAACCAACGTTTGTTCCCGAGTAGAAGCTCGCGCAGCAGGCTaGCGGTGGACGCCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QHKETHTQHATNVCSRVEARAAG*RWTPAR Trigger: CCGAGCTGGCGTCCACCGCCAGCCTGCTGCGCGAGC...TTCTACTCGGGAACAAACGTTGGTTGCGTGTTGAGTGTGTGTTTCCTTGTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR TCA 90 bp | CAACACAAGGAAACACACACTCAACACGCAACCAACGTTTGTTCCCGAGTAGAACCTGCTCCGCCAGGCTaGGCGTCAGCGCGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHKETHTQHATNVCSRVEPAPPG*ASARLS Trigger: AGAAAGACGCGCTGACGCTCAGCCTGGCGGAGCAGG...TTCTACTCGGGAACAAACGTTGGTTGCGTGTTGAGTGTGTGTTTCCTTGTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR GCA 90 bp | CGTAACGAAGACTTTACTGAAAACACAAAACCGGCGAACCAAGGATTACGGAACTTGAGCTGCGCCACCTaGTCGCGCAGCAGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RNEDFTENTKPANQGLRNLSCAT*SRSRLA Trigger: CGCCAGCCTGCTGCGCGAGCAGGTGGCGCAGCTCAA...GTTCCGTAATCCTTGGTTCGCCGGTTTTGTGTTTTCAGTAAAGTCTTCGTTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CCA 90 bp | CCGAGTAGAAACATAAATAGGGCGGAATCGGACACTCCCGTTCTCTCTTCCAAAGCGTGTCCATGTCGATaGGCGACAGCGGAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSRNINRAESDTPVLSSKACPCR*ATAEGC Trigger: ACAGCCCTCCGCTGTCGCCCATCGACATGGACACGC...TTTGGAAGAGAGAACGGGAGTGTCCGATTCCGCCCTATTTATGTTTCTACTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CCA 90 bp | CGTAACGAAGACTTTACTGAAAACACAAAACCGGCGAACCAAGGATTACGGAACCAGTACGCCGGGACCTaGTGCTGGGGCAGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RNEDFTENTKPANQGLRNQYAGT*CWGSSW Trigger: CCAGCTGCTGCCCCAGCACCAGGTCCCGGCGTACTG...GTTCCGTAATCCTTGGTTCGCCGGTTTTGTGTTTTCAGTAAAGTCTTCGTTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CCA 90 bp | CAACACAAGGAAACACACACTCAACACGCAACCAACGTTTGTTCCCGAGTAGAATGCAGTGGCCGACCCTaGTTTCAATCCCGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QHKETHTQHATNVCSRVECSGRP*FQSRRS Trigger: GGAGCGGCGGGATTGAAACCAGGGTCGGCCACTGCA...TTCTACTCGGGAACAAACGTTGGTTGCGTGTTGAGTGTGTGTTTCCTTGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR GCA 90 bp | CGCAACCAACGTTTGTTCCCGAGTAGAAACATAAATAGGGCGGAATCGGACACTCTGCTCCTCGCTAGCTaGCACCTTCGGGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNQRLFPSRNINRAESDTLLLAS*HLRVEE Trigger: TTCCTCTACCCGAAGGTGGCAGCTAGCGAGGAGCAG...AGTGTCCGATTCCGCCCTATTTATGTTTCTACTCGGGAACAAACGTTGGTTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CCA 90 bp | CCGAGTAGAAACATAAATAGGGCGGAATCGGACACTCCCGTTCTCTCTTCCAAAACCAGCCCGTTGGACTaGATGATCAGCCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSRNINRAESDTPVLSSKTSPLD*MISLSS Trigger: GCTGGAGAGGCTGATCATCCAGTCCAACGGGCTGGT...TTTGGAAGAGAGAACGGGAGTGTCCGATTCCGCCCTATTTATGTTTCTACTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| 3UTR CAA 72 bp | ACACAAGGAAACACACACTCAACACGCAACCAACGTTaGTTCCCGAGTAGAAACATAAATAGGGCGGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: TQGNTHSTRNQR*FPSRNINRAES Trigger: CGATTCCGCCCTATTTATGTTTCTACTCGGGAACAAACGTTGGTTGCGTGTTGAGTGTGTGTTTCCTTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS TCA 90 bp | TGTCGCCGAAGCTCGGCACGTCCGGCACGGTCTGCGGCTCGTCCTTaGGCGCGGCCAGGCGCGGTGGATGCGGAGGTGGCGGCGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: CRRSSARPARSAARP*ARPGAVDAEVAAAP Trigger: TGGGGCCGCCGCCACCTCCGCATCCACCGCGCCTGGCCGCGCTCAAGGACGAGCCGCAGACCGTGCCGGACGTGCCGAGCTTCGGCGACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 90 bp | GACAGCGGAGGGCTGTCGCCGAAGCTCGGCACGTCCGGCACGGTCTaGGGCTCGTCCTTGAGCGCGGCCAGGCGCGGTGGATGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: DSGGLSPKLGTSGTV*GSSLSAARRGGCGG Trigger: ACCTCCGCATCCACCGCGCCTGGCCGCGCTCAAGGACGAGCCGCAGACCGTGCCGGACGTGCCGAGCTTCGGCGACAGCCCTCCGCTGTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 90 bp | GCCCCTGAGGTGGCCGCGGTGGCCGCACCCAGCTGGCTTTGCTTGTaGAGGTCCTCCAGCGCCTTGACGAAGCCTTCGGCGAACTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: APEVAAVAAPSWLCL*RSSSALTKPSANSC Trigger: GCAGGAGTTCGCCGAAGGCTTCGTCAAGGCGCTGGAGGACCTGCACAAGCAAAGCCAGCTGGGTGCGGCCACCGCGGCCACCTCAGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS TCA 90 bp | TGGCCGACCCTGGTTTCAATCCCGCCGCTCCCTGCTCCGCCAGGCTaGGCGTCAGCGCGTCTTTCTTCAGCATGCTGCTCGTCGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WPTLVSIPPLPAPPG*ASARLSSACCSSGA Trigger: CGCCCCCGACGAGCAGCATGCTGAAGAAAGACGCGCTGACGCTCAGCCTGGCGGAGCAGGGAGCGGCGGGATTGAAACCAGGGTCGGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 90 bp | GCAGAAGGTGCAGTGGCCGACCCTGGTTTCAATCCCGCCGCTCCCTaGTCCGCCAGGCTGAGCGTCAGCGCGTCTTTCTTCAGCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: AEGAVADPGFNPAAP*SARLSVSASFFSML Trigger: CAGCATGCTGAAGAAAGACGCGCTGACGCTCAGCCTGGCGGAGCAGGGAGCGGCGGGATTGAAACCAGGGTCGGCCACTGCACCTTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 90 bp | CAGCGCCTTGACGAAGCCTTCGGCGAACTCCTGCTCCTCGCTAGCTaGCACCTTCGGGTAGAGGAACTGCGTACTGGTCGGGGTAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: QRLDEAFGELLLLAS*HLRVEELRTGRGSG Trigger: ACCACTACCCCGACCAGTACGCAGTTCCTCTACCCGAAGGTGGCAGCTAGCGAGGAGCAGGAGTTCGCCGAAGGCTTCGTCAAGGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CCA 90 bp | AGGAACTGCGTACTGGTCGGGGTAGTGGTCACCAGCCCGTTGGACTaGATGATCAGCCTCTCCAGCTCCGGCGACGCGAGTTTGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RNCVLVGVVVTSPLD*MISLSSSGDASLSS Trigger: GCTGCTCAAACTCGCGTCGCCGGAGCTGGAGAGGCTGATCATCCAGTCCAACGGGCTGGTGACCACTACCCCGACCAGTACGCAGTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CAA 90 bp | CCGAGTAGAAACATAAATAGGGCGGAATCGGACACTCCCGTTCTCTCTTCCAAAGAGGCGGCGATGCGGTaGCGCAGCCTCTTGCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PSRNINRAESDTPVLSSKEAAMR*RSLLRS Trigger: GGAGCGCAAGAGGCTGCGCAACCGCATCGCCGCCTC...TTTGGAAGAGAGAACGGGAGTGTCCGATTCCGCCCTATTTATGTTTCTACTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CAA 90 bp | ACTTTACTGAAAACACAAAACCGGCGAACCAAGGATTACGGAACAGGAATGTGGGTCTGCGGCTCGTCCTaGAGCGCGGCCAGGCGCGGT | + |
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Preference number: 5 (lower is better) Translates to: TLLKTQNRRTKDYGTGMWVCGSS*SAARRG Trigger: ACCGCGCCTGGCCGCGCTCAAGGACGAGCCGCAGAC...CCACATTCCTGTTCCGTAATCCTTGGTTCGCCGGTTTTGTGTTTTCAGTAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CAA 90 bp | CAACACAAGGAAACACACACTCAACACGCAACCAACGTTTGTTCCCGAGTAGAACCCAGCTGGCTTTGCTaGTGCAGGTCCTCCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: QHKETHTQHATNVCSRVEPSWLC*CRSSSA Trigger: GGCGCTGGAGGACCTGCACAAGCAAAGCCAGCTGGG...TTCTACTCGGGAACAAACGTTGGTTGCGTGTTGAGTGTGTGTTTCCTTGTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CAA 90 bp | CGCAACCAACGTTTGTTCCCGAGTAGAAACATAAATAGGGCGGAATCGGACACTTTGCGCTTGCGGCATTaGGAGGCGGCGATGCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RNQRLFPSRNINRAESDTLRLRH*EAAMRL Trigger: CAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAA...AGTGTCCGATTCCGCCCTATTTATGTTTCTACTCGGGAACAAACGTTGGTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CAA 90 bp | CGTAACGAAGACTTTACTGAAAACACAAAACCGGCGAACCAAGGATTACGGAACCGGTTGCGCAGCCTCTaGCGCTCCGCCTTGATGCGT | + |
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Preference number: 5 (lower is better) Translates to: RNEDFTENTKPANQGLRNRLRSL*RSALMR Trigger: ACGCATCAAGGCGGAGCGCAAGAGGCTGCGCAACCG...GTTCCGTAATCCTTGGTTCGCCGGTTTTGTGTTTTCAGTAAAGTCTTCGTTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CAA 90 bp | CGTAACGAAGACTTTACTGAAAACACAAAACCGGCGAACCAAGGATTACGGAACCGCACCCAGCTGGCTTaGCTTGTGCAGGTCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RNEDFTENTKPANQGLRNRTQLA*LVQVLQ Trigger: CTGGAGGACCTGCACAAGCAAAGCCAGCTGGGTGCG...GTTCCGTAATCCTTGGTTCGCCGGTTTTGTGTTTTCAGTAAAGTCTTCGTTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CAA 90 bp | CCGAGTAGAAACATAAATAGGGCGGAATCGGACACTCCCGTTCTCTCTTCCAAACGCCTTGATGCGTTCTaGCGTGTCCATGTCGATGGG | + |
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Preference number: 5 (lower is better) Translates to: PSRNINRAESDTPVLSSKRLDAF*RVHVDG Trigger: CCCATCGACATGGACACGCAAGAACGCATCAAGGCG...TTTGGAAGAGAGAACGGGAGTGTCCGATTCCGCCCTATTTATGTTTCTACTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS-3UTR CAA 90 bp | CGTAACGAAGACTTTACTGAAAACACAAAACCGGCGAACCAAGGATTACGGAACTGGCTTTTGAGGGTCTaGACTTTCTCCTCCAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RNEDFTENTKPANQGLRNWLLRV*TFSSRR Trigger: GCGCCTGGAGGAGAAAGTCAAGACCCTCAAAAGCCA...GTTCCGTAATCCTTGGTTCGCCGGTTTTGTGTTTTCAGTAAAGTCTTCGTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 90 bp | CTGTCGCCGAAGCTCGGCACGTCCGGCACGGTCTGCGGCTCGTCCTaGAGCGCGGCCAGGCGCGGTGGATGCGGAGGTGGCGGCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LSPKLGTSGTVCGSS*SAARRGGCGGGGGP Trigger: GGGGCCGCCGCCACCTCCGCATCCACCGCGCCTGGCCGCGCTCAAGGACGAGCCGCAGACCGTGCCGGACGTGCCGAGCTTCGGCGACAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS TCA 72 bp | AGCTCGGCACGTCCGGCACGGTCTGCGGCTCGTCCTTaGGCGCGGCCAGGCGCGGTGGATGCGGAGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SSARPARSAARP*ARPGAVDAEVA Trigger: CGCCACCTCCGCATCCACCGCGCCTGGCCGCGCTCAAGGACGAGCCGCAGACCGTGCCGGACGTGCCGAGCT 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 72 bp | CCCGTCGGGGGCGCCGTCGGGGCGCAGCGCAGAAGGTaGAGTGGCCGACCCTGGTTTCAATCCCGCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PVGGAVGAQRRR*SGRPWFQSRRS Trigger: GGAGCGGCGGGATTGAAACCAGGGTCGGCCACTGCACCTTCTGCGCTGCGCCCCGACGGCGCCCCCGACGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 72 bp | GGGCTGTCGCCGAAGCTCGGCACGTCCGGCACGGTCTaGGGCTCGTCCTTGAGCGCGGCCAGGCGCGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GLSPKLGTSGTV*GSSLSAARRGG Trigger: TCCACCGCGCCTGGCCGCGCTCAAGGACGAGCCGCAGACCGTGCCGGACGTGCCGAGCTTCGGCGACAGCCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CCA 72 bp | GCGCGGGAGGCGCGGGAGCCCCTGAGGTGGCCGCGGTaGCCGCACCCAGCTGGCTTTGCTTGTGCAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AREAREPLRWPR*PHPAGFACAGP Trigger: AGGACCTGCACAAGCAAAGCCAGCTGGGTGCGGCCACCGCGGCCACCTCAGGGGCTCCCGCGCCTCCCGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CCA 72 bp | GTCGGGGCGCAGCGCAGAAGGTGCAGTGGCCGACCCTaGTTTCAATCCCGCCGCTCCCTGCTCCGCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: VGAQRRRCSGRP*FQSRRSLLRQA Trigger: AGCCTGGCGGAGCAGGGAGCGGCGGGATTGAAACCAGGGTCGGCCACTGCACCTTCTGCGCTGCGCCCCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 72 bp | GTGGCCGCGGTGGCCGCACCCAGCTGGCTTTGCTTGTaGAGGTCCTCCAGCGCCTTGACGAAGCCTTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: VAAVAAPSWLCL*RSSSALTKPSA Trigger: CGCCGAAGGCTTCGTCAAGGCGCTGGAGGACCTGCACAAGCAAAGCCAGCTGGGTGCGGCCACCGCGGCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 72 bp | CCTGAGGTGGCCGCGGTGGCCGCACCCAGCTGGCTTTaGTTGTGCAGGTCCTCCAGCGCCTTGACGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PEVAAVAAPSWL*LCRSSSALTKP Trigger: AGGCTTCGTCAAGGCGCTGGAGGACCTGCACAAGCAAAGCCAGCTGGGTGCGGCCACCGCGGCCACCTCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 72 bp | GCAGTGGCCGACCCTGGTTTCAATCCCGCCGCTCCCTaGTCCGCCAGGCTGAGCGTCAGCGCGTCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AVADPGFNPAAP*SARLSVSASFF Trigger: GAAGAAAGACGCGCTGACGCTCAGCCTGGCGGAGCAGGGAGCGGCGGGATTGAAACCAGGGTCGGCCACTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 72 bp | TCTCCTCCAGGCGCGAGATACGCTCCAGCTTGCGCTTaGGGCATTTGGAGGCGGCGATGCGGTTGCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SPPGARYAPACA*GIWRRRCGCAA Trigger: GGCTGCGCAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAAGCTGGAGCGTATCTCGCGCCTGGAGGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CCA 72 bp | GGCGCGAGATACGCTCCAGCTTGCGCTTGCGGCATTTaGAGGCGGCGATGCGGTTGCGCAGCCTCTTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: GARYAPACACGI*RRRCGCAASCA Trigger: AGCGCAAGAGGCTGCGCAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAAGCTGGAGCGTATCTCGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 72 bp | AGGCGCGAGATACGCTCCAGCTTGCGCTTGCGGCATTaGGAGGCGGCGATGCGGTTGCGCAGCCTCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: RREIRSSLRLRH*EAAMRLRSLLR Trigger: GCGCAAGAGGCTGCGCAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAAGCTGGAGCGTATCTCGCGCCT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 90 bp | GTGGCCGCACCCAGCTGGCTTTGCTTGTGCAGGTCCTCCAGCGCCTaGACGAAGCCTTCGGCGAACTCCTGCTCCTCGCTAGCTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: VAAPSWLCLCRSSSA*TKPSANSCSSLAAT Trigger: GGTGGCAGCTAGCGAGGAGCAGGAGTTCGCCGAAGGCTTCGTCAAGGCGCTGGAGGACCTGCACAAGCAAAGCCAGCTGGGTGCGGCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 90 bp | TTCTCCTCCAGGCGCGAGATACGCTCCAGCTTGCGCTTGCGGCATTaGGAGGCGGCGATGCGGTTGCGCAGCCTCTTGCGCTCCGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FSSRREIRSSLRLRH*EAAMRLRSLLRSAL Trigger: CAAGGCGGAGCGCAAGAGGCTGCGCAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAAGCTGGAGCGTATCTCGCGCCTGGAGGAGAA 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 72 bp | TTCTCCTCCAGGCGCGAGATACGCTCCAGCTTGCGCTaGCGGCATTTGGAGGCGGCGATGCGGTTGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: FSSRREIRSSLR*RHLEAAMRLRS Trigger: GCTGCGCAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAAGCTGGAGCGTATCTCGCGCCTGGAGGAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS TCA 72 bp | CTGGTTTCAATCCCGCCGCTCCCTGCTCCGCCAGGCTaGGCGTCAGCGCGTCTTTCTTCAGCATGCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LVSIPPLPAPPG*ASARLSSACCS Trigger: CGAGCAGCATGCTGAAGAAAGACGCGCTGACGCTCAGCCTGGCGGAGCAGGGAGCGGCGGGATTGAAACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CCA 72 bp | GTACTGGTCGGGGTAGTGGTCACCAGCCCGTTGGACTaGATGATCAGCCTCTCCAGCTCCGGCGACGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: VLVGVVVTSPLD*MISLSSSGDAS Trigger: ACTCGCGTCGCCGGAGCTGGAGAGGCTGATCATCCAGTCCAACGGGCTGGTGACCACTACCCCGACCAGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 72 bp | AGCTTGCGCTTGCGGCATTTGGAGGCGGCGATGCGGTaGCGCAGCCTCTTGCGCTCCGCCTTGATGCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLRLRHLEAAMR*RSLLRSALMRS Trigger: AGAACGCATCAAGGCGGAGCGCAAGAGGCTGCGCAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 90 bp | ATACGCTCCAGCTTGCGCTTGCGGCATTTGGAGGCGGCGATGCGGTaGCGCAGCCTCTTGCGCTCCGCCTTGATGCGTTCTTGCGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: IRSSLRLRHLEAAMR*RSLLRSALMRSCVS Trigger: GGACACGCAAGAACGCATCAAGGCGGAGCGCAAGAGGCTGCGCAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAAGCTGGAGCGTAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS GCA 72 bp | GACGAAGCCTTCGGCGAACTCCTGCTCCTCGCTAGCTaGCACCTTCGGGTAGAGGAACTGCGTACTGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: DEAFGELLLLAS*HLRVEELRTGR Trigger: CCGACCAGTACGCAGTTCCTCTACCCGAAGGTGGCAGCTAGCGAGGAGCAGGAGTTCGCCGAAGGCTTCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 72 bp | AACTGCGTACTGGTCGGGGTAGTGGTCACCAGCCCGTaGGACTGGATGATCAGCCTCTCCAGCTCCGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: NCVLVGVVVTSP*DWMISLSSSGD Trigger: GTCGCCGGAGCTGGAGAGGCTGATCATCCAGTCCAACGGGCTGGTGACCACTACCCCGACCAGTACGCAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 72 bp | CCCAGCTGGCTTTGCTTGTGCAGGTCCTCCAGCGCCTaGACGAAGCCTTCGGCGAACTCCTGCTCCTCGCTA | + |
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Preference number: 6 (lower is better) Translates to: PSWLCLCRSSSA*TKPSANSCSSL Trigger: TAGCGAGGAGCAGGAGTTCGCCGAAGGCTTCGTCAAGGCGCTGGAGGACCTGCACAAGCAAAGCCAGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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| CDS CAA 72 bp | TTGACTTTCTCCTCCAGGCGCGAGATACGCTCCAGCTaGCGCTTGCGGCATTTGGAGGCGGCGATGCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LTFSSRREIRSS*RLRHLEAAMRL Trigger: CAACCGCATCGCCGCCTCCAAATGCCGCAAGCGCAAGCTGGAGCGTATCTCGCGCCTGGAGGAGAAAGTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095267.8 |
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