RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JUNB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052837

Ensembl transcript IDs: ENSMUST00000064922.7

Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTaGGCTGCGCCCCAGGCCTTTTGGCGGGTGCCCATCGCCTGCCCC +
Preference number: 1 (lower is better)
Translates to: RWKDWAQAGGPESSV*AAPQAFWRVPIACP
Trigger: GGGGCAGGCGATGGGCACCCGCCAAAAGGCCTGGGGCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
3UTR-3UTR GCA 90 bp GGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCCCCCGGGTGCCCATCGCCTaGCCCCCTCACCCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: GRTGRRRAGRSPVCELRPRVPIA*PPHPSG
Trigger: CCCACTGGGGTGAGGGGGGCAGGCGATGGGCACCCG...GGGGCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
3UTR-3UTR CCA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCCCCAGCCTTCAAGGCTaGGGGTGTCCGTATGGGGCA +
Preference number: 2 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRPSLQG*GCPYGA
Trigger: TGCCCCATACGGACACCCCCAGCCTTGAAGGCTGGG...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
3UTR-3UTR CCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCATCGAGGTGGAAGGACTaGGCGCAGGCGGGCGGGCCG +
Preference number: 2 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRASRWKD*AQAGGP
Trigger: CGGCCCGCCCGCCTGCGCCCAGTCCTTCCACCTCGA...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
3UTR GCA 72 bp GGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTaGGCCCCAGGCCTTTTGGCGGGTGCCCATCGCCTG +
Preference number: 3 (lower is better)
Translates to: GAGGRAGVQCVS*APGLLAGAHRL
Trigger: CAGGCGATGGGCACCCGCCAAAAGGCCTGGGGCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
3UTR TCA 72 bp GACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTaGGCTGCGCCCCAGGCCTTTTGGCGGGTGCCCATC +
Preference number: 3 (lower is better)
Translates to: DWAQAGGPESSV*AAPQAFWRVPI
Trigger: GATGGGCACCCGCCAAAAGGCCTGGGGCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp GGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCCCCGGTGGCCGTCGGGTATaGGCTCCCAGTCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: GRTGRRRAGRSPVCELRPGGRRV*APSPDG
Trigger: GCCGTCGGGACTGGGAGCTCATACCCGACGGCCACC...GGGGCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp GTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCCCAGCTGCCTGCCCCACTaGCCTCCGGGCCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: VSPQAEYQAAGPAPPRQPSCLPH*PPGLDP
Trigger: GGGGTCCAGGCCCGGAGGGCAGTGGGGCAGGCAGCT...GGGCTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCAGCATAGACGCCCCCTaGGCCGGCCTGGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRSIDAP*AGLGTP
Trigger: GGGGGTCCCCAGGCCGGCCCAGGGGGCGTCTATGCT...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp GGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCCCCGCGTGGGCGTCGTCGTaGTCACGCCGTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRTGRRRAGRSPVCELRPAWASS*SRRCCW
Trigger: CCAACAGCAACGGCGTGATCACGACGACGCCCACGC...GGGGCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp CTAGTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGGGCGTCGCGGCTGCGTaGCTCCGGTACGGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: LVSPQAEYQAAGPAPPRQGVAAA*LRYGLR
Trigger: CCGCAGACCGTACCGGAGGCACGCAGCCGCGACGCC...CTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATACTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp GTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCCCCCTGGTCTTCCATGTTaGTGGGGGACACAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VSPQAEYQAAGPAPPRQPPGLPC*WGTQAA
Trigger: CGCCGCCTGTGTCCCCCATCAACATGGAAGACCAGG...GGGCTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCGACCCGAAAAGTAGCTaGCTGCCCCACTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRDPKSS*LPHCPP
Trigger: CGGAGGGCAGTGGGGCAGGCAGCTACTTTTCGGGTC...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp GTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCCCCATGTGGGAGGTAGCTaGTGGTGGCCGTCGGGTATG +
Preference number: 4 (lower is better)
Translates to: VSPQAEYQAAGPAPPRQPHVGGS*WWPSGM
Trigger: CATACCCGACGGCCACCATCAGCTACCTCCCACATG...GGGCTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCAGAAGGCGTGTCCCTTaGCCCCTAGCAGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRRRRVP*PLAATG
Trigger: GCCAGTTGCTGCTAGGGGTCAAGGGACACGCCTTCT...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCCGTGTAGAGACAGGCTaGCAGGGCTCCGACCGTATC +
Preference number: 4 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRRVETG*QGSDRI
Trigger: GATACGGTCGGAGCCCTGGCAGCCTGTCTCTACACG...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp CTAGTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCGAAAAGTAGCTGCCTaGCCCACTGCCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LVSPQAEYQAAGPAPPRQRKVAA*PTALRA
Trigger: GGCCCGGAGGGCAGTGGGGCAGGCAGCTACTTTTCG...CTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATACTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp GGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCCCCTCACGCCGTTGCTGTTaGGGACGATCAAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRTGRRRAGRSPVCELRPSRRCC*GRSSAP
Trigger: TGGAGCGCTTGATCGTCCCCAACAGCAACGGCGTGA...GGGGCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp GGGCAGGCGCCCAGCCTTCAAGGCTGGGGGTGTCCGTATGGGGCAAGGGAGGCTGCTTCCGGCACTTGGTaGCCGCCAGCCTGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GQAPSLQGWGCPYGAREAASGTW*PPACSA
Trigger: TGCGGAACAGGCTGGCGGCCACCAAGTGCCGGAAGC...AGCCTCCCTTGCCCCATACGGACACCCCCAGCCTTGAAGGCTGGGCGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp GGGCAGGCGCCCAGCCTTCAAGGCTGGGGGTGTCCGTATGGGGCAAGGGAGGCTTCCGCTTCCGGCACTTaGTGGCCGCCAGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GQAPSLQGWGCPYGAREASASGT*WPPACS
Trigger: GGAACAGGCTGGCGGCCACCAAGTGCCGGAAGCGGA...AGCCTCCCTTGCCCCATACGGACACCCCCAGCCTTGAAGGCTGGGCGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp GTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCCCGGTCGTCCAGGGCTTTaGCAAAACCGTCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VSPQAEYQAAGPAPPRQPGRPGL*QNRPQS
Trigger: GCTTTGCGGACGGTTTTGTCAAAGCCCTGGACGACC...GGGCTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp CTAGTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCTGTACCTCCACCGCTaGCACCCCCACGGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: LVSPQAEYQAAGPAPPRQLYLHR*HPHGGK
Trigger: TTTACCCCCGTGGGGGTGGCAGCGGTGGAGGTACAG...CTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATACTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCACCTTCTGCTTGAGCTaGGCCACTTGCTCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRTFCLS*ATCSRR
Trigger: CCTACGGGAGCAAGTGGCGCAGCTCAAGCAGAAGGT...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp GGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCCCCAAAGGGTGGTGCATGTaGGAGGTAGCTGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRTGRRRAGRSPVCELRPKGWCM*EVADGG
Trigger: GCCACCATCAGCTACCTCCCACATGCACCACCCTTT...GGGGCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCACCCCTAGCAGCAACTaGCAGCCGTTGCTGACATGG +
Preference number: 4 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRTPSSN*QPLLTW
Trigger: CCATGTCAGCAACGGCTGCCAGTTGCTGCTAGGGGT...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp GTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCCCTGGGTCATGACCTTCTaGTTGAGCTGCGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: VSPQAEYQAAGPAPPRQPWVMTF*LSCATC
Trigger: GCAAGTGGCGCAGCTCAAGCAGAAGGTCATGACCCA...GGGCTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCACGTGGTTCATCTTGTaGAGGTCGTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRTWFIL*RSSRAL
Trigger: CAAAGCCCTGGACGACCTGCACAAGATGAACCACGT...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp GTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCCCACTTTGATGCGCTCCTaGTCTTCCATGTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: VSPQAEYQAAGPAPPRQPTLMRS*SSMLMG
Trigger: CCCCATCAACATGGAAGACCAGGAGCGCATCAAAGT...GGGCTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCACCTGGGGACCCCCGCTaGCGCCCAGGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRAPGDPR*RPGTRW
Trigger: CCAACGTGTCCCTGGGCGCCAGCGGGGGTCCCCAGG...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCACCTCCTGCTCCTCGGTaGCGCCGCCCCCTGTACCTC +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRAPPAPR*RRPLYL
Trigger: GAGGTACAGGGGGCGGCGTCACCGAGGAGCAGGAGG...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCATCCGCAAAGCCCTCCTaGTCCTCGGTGACGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRASAKPS*SSVTPP
Trigger: GGGCGGCGTCACCGAGGAGCAGGAGGGCTTTGCGGA...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCACGCCCAGGGACACGTTaGGGGGCGTCACGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRARPGTR*GASRGS
Trigger: TGAACCACGTGACGCCCCCCAACGTGTCCCTGGGCG...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCAGCCGCCCGCAAAGGGTaGTGCATGTGGGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRAAARKG*CMWEVA
Trigger: AGCTACCTCCCACATGCACCACCCTTTGCGGGCGGC...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCACTGGGGAGTAACTGCTaGGGTTGGTGTAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRALGSNC*GWCRRE
Trigger: CTCCCGTCTACACCAACCTCAGCAGTTACTCCCCAG...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCAGCCCGCAAAGGGTGGTaGATGTGGGAGGTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRAARKGW*MWEVAD
Trigger: ATCAGCTACCTCCCACATGCACCACCCTTTGCGGGC...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR TCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCACCGCGTTCTCAGCCTTaGGTGTCTTCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRAPRSQP*VSSPCP
Trigger: AGGACAAGGTGAAGACACTCAAGGCTGAGAACGCGG...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR GCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCAACCGTATCCCGCCGCTaGGTAAGAGTCGTCGTGATA +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRATVSRR*VRVVVI
Trigger: TATCACGACGACTCTTACGCAGCGGCGGGATACGGT...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CCA 90 bp TTAGACACGAAGTGCGTGTTTCTTCTCCACAGTACTATGCAGAGGGGGAGGGCACAGCCGTTGCTGACATaGGTCATGACCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LDTKCVFLLHSTMQRGRAQPLLT*VMTFCL
Trigger: CAAGCAGAAGGTCATGACCCATGTCAGCAACGGCTG...TGCCCTCCCCCTCTGCATAGTACTGTGGAGAAGAAACACGCACTTCGTGTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CCA 90 bp CCCAGTCCCGACGGCGGTCCCGGAGCCTCCAGAGGGTGCAGAGGCTaGGGAGTAACTGCTGAGGTTGGTGTAGACGGGAGGCGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: PSPDGGPGASRGCRG*GVTAEVGVDGRRLR
Trigger: CCGGAGCCGCCTCCCGTCTACACCAACCTCAGCAGTTACTCCCCAGCCTCTGCACCCTCTGGAGGCTCCGGGACCGCCGTCGGGACTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 90 bp GACACAGGCGGCGTGGCGTCGCGGCTGCGTGCCTCCGGTACGGTCTaGGGTTCCTCTTTAAAGGCGGAAGCGCCGCGACTCAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: DTGGVASRLRASGTV*GSSLKAEAPRLKPS
Trigger: GCTGGGCTTGAGTCGCGGCGCTTCCGCCTTTAAAGAGGAACCGCAGACCGTACCGGAGGCACGCAGCCGCGACGCCACGCCGCCTGTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CAA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCATCACGCCGTTGCTGTaGGGGACGATCAAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRITPLL*GTIKRS
Trigger: GGAGCGCTTGATCGTCCCCAACAGCAACGGCGTGAT...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CAA 90 bp GTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGCCCCAGAAGGCGTGTCCCTaGACCCCTAGCAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: VSPQAEYQAAGPAPPRQPQKACP*TPSSNW
Trigger: CCAGTTGCTGCTAGGGGTCAAGGGACACGCCTTCTG...GGGCTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CAA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCGTCGTGATCACGCCGTaGCTGTTGGGGACGATCAAG +
Preference number: 5 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRVVITP*LLGTIK
Trigger: CTTGATCGTCCCCAACAGCAACGGCGTGATCACGAC...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CAA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCGTCACGTGGTTCATCTaGTGCAGGTCGTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRVTWFI*CRSSRA
Trigger: AGCCCTGGACGACCTGCACAAGATGAACCACGTGAC...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 90 bp TGCAGGTCGTCCAGGGCTTTGACAAAACCGTCCGCAAAGCCCTCCTaGTCCTCGGTGACGCCGCCCCCTGTACCTCCACCGCTGCCACCC +
Preference number: 5 (lower is better)
Translates to: CRSSRALTKPSAKPS*SSVTPPPVPPPLPP
Trigger: GGGTGGCAGCGGTGGAGGTACAGGGGGCGGCGTCACCGAGGAGCAGGAGGGCTTTGCGGACGGTTTTGTCAAAGCCCTGGACGACCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CAA 90 bp GGTGGAAGGACTGGGCGCAGGCGGGCGGGCCGGAGTCCAGTGTGTGAGCTGCGCAGGTCGTCCAGGGCTTaGACAAAACCGTCCGCAAAG +
Preference number: 5 (lower is better)
Translates to: GGRTGRRRAGRSPVCELRRSSRA*TKPSAK
Trigger: CTTTGCGGACGGTTTTGTCAAAGCCCTGGACGACCT...GCGCAGCTCACACACTGGACTCCGGCCCGCCCGCCTGCGCCCAGTCCTTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS TCA 90 bp CCCGTAGGAGACCGGCAGCACTCGACAGCCCCGCGTTCTCAGCCTTaGGTGTCTTCACCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PVGDRQHSTAPRSQP*VSSPCPPGARCAPA
Trigger: AGCTGGAGCGCATCGCGCGCCTGGAGGACAAGGTGAAGACACTCAAGGCTGAGAACGCGGGGCTGTCGAGTGCTGCCGGTCTCCTACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 90 bp CGGTTCCTCTTTAAAGGCGGAAGCGCCGCGACTCAAGCCCAGCTGTaGCGGGTGGCCGCCCGCAAAGGGTGGTGCATGTGGGAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: RFLFKGGSAATQAQL*RVAARKGWCMWEVA
Trigger: AGCTACCTCCCACATGCACCACCCTTTGCGGGCGGCCACCCGGCACAGCTGGGCTTGAGTCGCGGCGCTTCCGCCTTTAAAGAGGAACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CAA 90 bp CTAGTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGTTGAGTGTCTTCACCTaGTCCTCCAGGCGCGCGATG +
Preference number: 5 (lower is better)
Translates to: LVSPQAEYQAAGPAPPRQLSVFT*SSRRAM
Trigger: CATCGCGCGCCTGGAGGACAAGGTGAAGACACTCAA...CTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATACTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CAA 90 bp GGGCAGGCGCCCAGCCTTCAAGGCTGGGGGTGTCCGTATGGGGCAAGGGAGGCTCCCGCGTTCTCAGCCTaGAGTGTCTTCACCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GQAPSLQGWGCPYGAREAPAFSA*SVFTLS
Trigger: GGACAAGGTGAAGACACTCAAGGCTGAGAACGCGGG...AGCCTCCCTTGCCCCATACGGACACCCCCAGCCTTGAAGGCTGGGCGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS-3UTR CAA 90 bp CTAGTATCCCCGCAGGCTGAGTACCAAGCGGCGGGGCCAGCTCCGCCGCGACAGAGCAACTGGCAGCCGTaGCTGACATGGGTCATGACC +
Preference number: 5 (lower is better)
Translates to: LVSPQAEYQAAGPAPPRQSNWQP*LTWVMT
Trigger: GGTCATGACCCATGTCAGCAACGGCTGCCAGTTGCT...CTGTCGCGGCGGAGCTGGCCCCGCCGCTTGGTACTCAGCCTGCGGGGATACTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 90 bp GCGCCAAGGTGGGTTTCAGGAGTTTGTAGTCGTGTAGAGACAGGCTaGCAGGGCTCCGACCGTATCCCGCCGCTGCGTAAGAGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: APRWVSGVCSRVETG*QGSDRIPPLRKSRR
Trigger: ACGACGACTCTTACGCAGCGGCGGGATACGGTCGGAGCCCTGGCAGCCTGTCTCTACACGACTACAAACTCCTGAAACCCACCTTGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CCA 72 bp GGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTaGTGGCCGCCAGCCTGTTCCGCAGCCGCTTTCGCT +
Preference number: 6 (lower is better)
Translates to: GARCAPASASGT*WPPACSAAAFA
Trigger: AGCGAAAGCGGCTGCGGAACAGGCTGGCGGCCACCAAGTGCCGGAAGCGGAAGCTGGAGCGCATCGCGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CAA 72 bp AGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTaGGTGGCCGCCAGCCTGTTCCGCAGCCGCTTTCGC +
Preference number: 6 (lower is better)
Translates to: RRAMRSSFRFRH*VAASLFRSRFR
Trigger: GCGAAAGCGGCTGCGGAACAGGCTGGCGGCCACCAAGTGCCGGAAGCGGAAGCTGGAGCGCATCGCGCGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 72 bp GGCGTGGCGTCGCGGCTGCGTGCCTCCGGTACGGTCTaGGGTTCCTCTTTAAAGGCGGAAGCGCCGCGACTC +
Preference number: 6 (lower is better)
Translates to: GVASRLRASGTV*GSSLKAEAPRL
Trigger: GAGTCGCGGCGCTTCCGCCTTTAAAGAGGAACCGCAGACCGTACCGGAGGCACGCAGCCGCGACGCCACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CCA 72 bp CAAGCCCAGCTGTGCCGGGTGGCCGCCCGCAAAGGGTaGTGCATGTGGGAGGTAGCTGATGGTGGCCGTCGG +
Preference number: 6 (lower is better)
Translates to: QAQLCRVAARKG*CMWEVADGGRR
Trigger: CCGACGGCCACCATCAGCTACCTCCCACATGCACCACCCTTTGCGGGCGGCCACCCGGCACAGCTGGGCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 72 bp GATGGGGGACACAGGCGGCGTGGCGTCGCGGCTGCGTaGCTCCGGTACGGTCTGCGGTTCCTCTTTAAAGGC +
Preference number: 6 (lower is better)
Translates to: DGGHRRRGVAAA*LRYGLRFLFKG
Trigger: GCCTTTAAAGAGGAACCGCAGACCGTACCGGAGGCACGCAGCCGCGACGCCACGCCGCCTGTGTCCCCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CAA 90 bp TTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTaGGTGGCCGCCAGCCTGTTCCGCAGCCGCTTTCGCTCCACTTTG +
Preference number: 6 (lower is better)
Translates to: LSSRRAMRSSFRFRH*VAASLFRSRFRSTL
Trigger: CAAAGTGGAGCGAAAGCGGCTGCGGAACAGGCTGGCGGCCACCAAGTGCCGGAAGCGGAAGCTGGAGCGCATCGCGCGCCTGGAGGACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 72 bp TTTAAAGGCGGAAGCGCCGCGACTCAAGCCCAGCTGTaGCGGGTGGCCGCCCGCAAAGGGTGGTGCATGTGG +
Preference number: 6 (lower is better)
Translates to: FKGGSAATQAQL*RVAARKGWCMW
Trigger: CCACATGCACCACCCTTTGCGGGCGGCCACCCGGCACAGCTGGGCTTGAGTCGCGGCGCTTCCGCCTTTAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CCA 72 bp GACGGCGGTCCCGGAGCCTCCAGAGGGTGCAGAGGCTaGGGAGTAACTGCTGAGGTTGGTGTAGACGGGAGG +
Preference number: 6 (lower is better)
Translates to: DGGPGASRGCRG*GVTAEVGVDGR
Trigger: CCTCCCGTCTACACCAACCTCAGCAGTTACTCCCCAGCCTCTGCACCCTCTGGAGGCTCCGGGACCGCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CAA 90 bp TCCCGTAGGAGACCGGCAGCACTCGACAGCCCCGCGTTCTCAGCCTaGAGTGTCTTCACCTTGTCCTCCAGGCGCGCGATGCGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SRRRPAALDSPAFSA*SVFTLSSRRAMRSS
Trigger: GCTGGAGCGCATCGCGCGCCTGGAGGACAAGGTGAAGACACTCAAGGCTGAGAACGCGGGGCTGTCGAGTGCTGCCGGTCTCCTACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS TCA 72 bp GACCGGCAGCACTCGACAGCCCCGCGTTCTCAGCCTTaGGTGTCTTCACCTTGTCCTCCAGGCGCGCGATGC +
Preference number: 6 (lower is better)
Translates to: DRQHSTAPRSQP*VSSPCPPGARC
Trigger: GCATCGCGCGCCTGGAGGACAAGGTGAAGACACTCAAGGCTGAGAACGCGGGGCTGTCGAGTGCTGCCGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 72 bp TCCAGGGCTTTGACAAAACCGTCCGCAAAGCCCTCCTaGTCCTCGGTGACGCCGCCCCCTGTACCTCCACCG +
Preference number: 6 (lower is better)
Translates to: SRALTKPSAKPS*SSVTPPPVPPP
Trigger: CGGTGGAGGTACAGGGGGCGGCGTCACCGAGGAGCAGGAGGGCTTTGCGGACGGTTTTGTCAAAGCCCTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CAA 72 bp GGAGGCGTGGGCGTCGTCGTGATCACGCCGTTGCTGTaGGGGACGATCAAGCGCTCCAGTTCCGTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: GGVGVVVITPLL*GTIKRSSSVEA
Trigger: AGCCTCCACGGAACTGGAGCGCTTGATCGTCCCCAACAGCAACGGCGTGATCACGACGACGCCCACGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CAA 72 bp TGTCCCGGAGGCGTGGGCGTCGTCGTGATCACGCCGTaGCTGTTGGGGACGATCAAGCGCTCCAGTTCCGTG +
Preference number: 6 (lower is better)
Translates to: CPGGVGVVVITP*LLGTIKRSSSV
Trigger: CACGGAACTGGAGCGCTTGATCGTCCCCAACAGCAACGGCGTGATCACGACGACGCCCACGCCTCCGGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CAA 72 bp AGACCGGCAGCACTCGACAGCCCCGCGTTCTCAGCCTaGAGTGTCTTCACCTTGTCCTCCAGGCGCGCGATG +
Preference number: 6 (lower is better)
Translates to: RPAALDSPAFSA*SVFTLSSRRAM
Trigger: CATCGCGCGCCTGGAGGACAAGGTGAAGACACTCAAGGCTGAGAACGCGGGGCTGTCGAGTGCTGCCGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CAA 90 bp TACTGTCCCGGAGGCGTGGGCGTCGTCGTGATCACGCCGTTGCTGTaGGGGACGATCAAGCGCTCCAGTTCCGTGGAGGCTAGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: YCPGGVGVVVITPLL*GTIKRSSSVEASFR
Trigger: TCTGAAGCTAGCCTCCACGGAACTGGAGCGCTTGATCGTCCCCAACAGCAACGGCGTGATCACGACGACGCCCACGCCTCCGGGACAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CAA 72 bp GCCGCCAGCCTGTTCCGCAGCCGCTTTCGCTCCACTTaGATGCGCTCCTGGTCTTCCATGTTGATGGGGGAC +
Preference number: 6 (lower is better)
Translates to: AASLFRSRFRST*MRSWSSMLMGD
Trigger: GTCCCCCATCAACATGGAAGACCAGGAGCGCATCAAAGTGGAGCGAAAGCGGCTGCGGAACAGGCTGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS TCA 72 bp GGTAAAAGTACTGTCCCGGAGGCGTGGGCGTCGTCGTaGTCACGCCGTTGCTGTTGGGGACGATCAAGCGCT +
Preference number: 6 (lower is better)
Translates to: GKSTVPEAWASS*SRRCCWGRSSA
Trigger: AGCGCTTGATCGTCCCCAACAGCAACGGCGTGATCACGACGACGCCCACGCCTCCGGGACAGTACTTTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 72 bp AGACAGGCTGCCAGGGCTCCGACCGTATCCCGCCGCTaGGTAAGAGTCGTCGTGATAGAAAGGCTGTTCCAT +
Preference number: 6 (lower is better)
Translates to: RQAARAPTVSRR*VRVVVIERLFH
Trigger: ATGGAACAGCCTTTCTATCACGACGACTCTTACGCAGCGGCGGGATACGGTCGGAGCCCTGGCAGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS GCA 72 bp TGGGTTTCAGGAGTTTGTAGTCGTGTAGAGACAGGCTaGCAGGGCTCCGACCGTATCCCGCCGCTGCGTAAG +
Preference number: 6 (lower is better)
Translates to: WVSGVCSRVETG*QGSDRIPPLRK
Trigger: CTTACGCAGCGGCGGGATACGGTCGGAGCCCTGGCAGCCTGTCTCTACACGACTACAAACTCCTGAAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7
CDS CCA 72 bp CGTTGCTGTTGGGGACGATCAAGCGCTCCAGTTCCGTaGAGGCTAGCTTCAGAGATGCGCCTGTGTCTGATC +
Preference number: 6 (lower is better)
Translates to: RCCWGRSSAPVP*RLASEMRLCLI
Trigger: GATCAGACACAGGCGCATCTCTGAAGCTAGCCTCCACGGAACTGGAGCGCTTGATCGTCCCCAACAGCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064922.7