Pregenerated sensors for JUN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052684Ensembl transcript IDs: ENSMUST00000107094.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGCGGGCACAGCCCGTCCGCAAAGTCTGCCGGCCAATAGGCCGCTaGTCTCTGGCTCCACGCCAAAGCCAGGCGCGCCACGTCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: ARAQPVRKVCRPIGR*SLAPRQSQARHVLP Trigger: GGGAAGGACGTGGCGCGCCTGGCTTTGGCGTGGAGCCAGAGAGCAGCGGCCTATTGGCCGGCAGACTTTGCGGACGGGCTGTGCCCGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 90 bp | GTCCATCGTTCTGGTCGCGCGCGGGCACAGCCCGTCCGCAAAGTCTaGCGGCCAATAGGCCGCTGCTCTCTGGCTCCACGCCAAAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: VHRSGRARAQPVRKV*RPIGRCSLAPRQSQ Trigger: CTGGCTTTGGCGTGGAGCCAGAGAGCAGCGGCCTATTGGCCGGCAGACTTTGCGGACGGGCTGTGCCCGCGCGCGACCAGAACGATGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR CCA 90 bp | CCACGCCAAAGCCAGGCGCGCCACGTCCTTCCCACTCCAGCACACTaGGGGCGCCGTCAGGTCGCAACCCAGTCCATCTTGTGTACCCTT | + |
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Preference number: 1 (lower is better) Translates to: PRQSQARHVLPTPAH*GRRQVATQSILCTL Trigger: AAGGGTACACAAGATGGACTGGGTTGCGACCTGACGGCGCCCCCAGTGTGCTGGAGTGGGAAGGACGTGGCGCGCCTGGCTTTGGCGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR CCA 90 bp | GGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCATCGTTCTaGTCGCGCGCGGGCACAGCCCGTCCGCAAAGTCTGCCGGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: GPCSSWSMLTKSPSF*SRAGTARPQSLPAN Trigger: ATTGGCCGGCAGACTTTGCGGACGGGCTGTGCCCGCGCGCGACCAGAACGATGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR TCA 90 bp | CCACTTCATACAGCTTTCAACCAAAGTGTCTGCTTTCCAGCGGGCTaGCCCTCTCCCCTTGCAACAGCCCTTCTTCCAGCCTTAAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: PLHTAFNQSVCFPAG*PSPLATALLPALRN Trigger: GTTTCTTAAGGCTGGAAGAAGGGCTGTTGCAAGGGGAGAGGGTCAGCCCGCTGGAAAGCAGACACTTTGGTTGAAAGCTGTATGAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 90 bp | TTTCAACCAAAGTGTCTGCTTTCCAGCGGGCTGACCCTCTCCCCTTaGAACAGCCCTTCTTCCAGCCTTAAGAAACACCACACCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: FQPKCLLSSGLTLSP*NSPSSSLKKHHTIF Trigger: GAAGATGGTGTGGTGTTTCTTAAGGCTGGAAGAAGGGCTGTTGCAAGGGGAGAGGGTCAGCCCGCTGGAAAGCAGACACTTTGGTTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 90 bp | GGACTTGTGTGTTGCCGGGGGAGAGAGTATGAGCCAATGATAGCATaGAGGGTATCTATTCCTACAATCAGACAGGGGACACAGCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: GLVCCRGREYEPMIA*RVSIPTIRQGTQLS Trigger: TGAAAGCTGTGTCCCCTGTCTGATTGTAGGAATAGATACCCTGCATGCTATCATTGGCTCATACTCTCTCCCCCGGCAACACACAAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 90 bp | AGAAACACCACACCATCTTCTGGTGTACAGTCTGGACTTGTGTGTTaGCGGGGGAGAGAGTATGAGCCAATGATAGCATGCAGGGTATCT | + |
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Preference number: 1 (lower is better) Translates to: RNTTPSSGVQSGLVC*RGREYEPMIACRVS Trigger: AGATACCCTGCATGCTATCATTGGCTCATACTCTCTCCCCCGGCAACACACAAGTCCAGACTGTACACCAGAAGATGGTGTGGTGTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR TCA 90 bp | TTCTGGTGTACAGTCTGGACTTGTGTGTTGCCGGGGGAGAGAGTATaGGCCAATGATAGCATGCAGGGTATCTATTCCTACAATCAGACA | + |
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Preference number: 1 (lower is better) Translates to: FWCTVWTCVLPGERV*ANDSMQGIYSYNQT Trigger: TGTCTGATTGTAGGAATAGATACCCTGCATGCTATCATTGGCTCATACTCTCTCCCCCGGCAACACACAAGTCCAGACTGTACACCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR CCA 90 bp | TATATTGGGCACTCAGCTGTCACTTCATCTAGCTATCATTATCTATaGATAATGCAGCAAAGAGGTTGGGGGCTACTTTTCAATAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: YIGHSAVTSSSYHYL*IMQQRGWGLLFNSL Trigger: TAAACTATTGAAAAGTAGCCCCCAACCTCTTTGCTGCATTATCCATAGATAATGATAGCTAGATGAAGTGACAGCTGAGTGCCCAATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR CCA 90 bp | CAAATGGTAAACTCAGAATGCTTCAAATCTCTTATTTACAAACACTaGGCAGGACACCCAAACAAACAAACATGGAATAACTTACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: QMVNSECFKSLIYKH*AGHPNKQTWNNLQR Trigger: CCTTTGTAAGTTATTCCATGTTTGTTTGTTTGGGTGTCCTGCCCAGTGTTTGTAAATAAGAGATTTGAAGCATTCTGAGTTTACCATTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTCAATGTTAACGAAAAGTCCATCGTTCTGGTCGCGCGCGGGCACAGCCCGCGGCCAATAGGCCGCTaGTCTCTGGCTCCACGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LVNVNEKSIVLVARGHSPRPIGR*SLAPRQ Trigger: TTGGCGTGGAGCCAGAGAGCAGCGGCCTATTGGCCG...CGGGCTGTGCCCGCGCGCGACCAGAACGATGGACTTTTCGTTAACATTGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTAGGAGTTGTCAGATTCAAAGTTGGAAGGAGACACCTTTTGTTAAAAACTCCCACTCCAGCACACTaGGGGCGCCGTCAGGTCGCA | + |
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Preference number: 2 (lower is better) Translates to: FLGVVRFKVGRRHLLLKTPTPAH*GRRQVA Trigger: TGCGACCTGACGGCGCCCCCAGTGTGCTGGAGTGGG...AGTTTTTAACAAAAGGTGTCTCCTTCCAACTTTGAATCTGACAACTCCTAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGGGTATCTATTCCTACAATCAGACAGGGGACACAGCTTTCACCCTAGTCCCTTTAATACTGAATaGGATCGAATGTTAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: HAGYLFLQSDRGHSFHPSPFNTE*DRMLGP Trigger: TGGACCTAACATTCGATCTCATTCAGTATTAAAGGG...ACTAGGGTGAAAGCTGTGTCCCCTGTCTGATTGTAGGAATAGATACCCTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR CAA 90 bp | CTATTCCTACAATCAGACAGGGGACACAGCTTTCACCCTAGTATATaGGGCACTCAGCTGTCACTTCATCTAGCTATCATTATCTATGGA | + |
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Preference number: 2 (lower is better) Translates to: LFLQSDRGHSFHPSI*GTQLSLHLAIIIYG Trigger: TCCATAGATAATGATAGCTAGATGAAGTGACAGCTGAGTGCCCAATATACTAGGGTGAAAGCTGTGTCCCCTGTCTGATTGTAGGAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGTCAGATTCAAAGTTGGAAGGAGACACCTTTTGTTAAAAACTTCCATGGGTGGTCCATGCAGTTCTTaGTCAATGTTAACGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: VVRFKVGRRHLLLKTSMGGPCSS*SMLTKS Trigger: ACTTTTCGTTAACATTGACCAAGAACTGCATGGACC...ACCCATGGAAGTTTTTAACAAAAGGTGTCTCCTTCCAACTTTGAATCTGACAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 72 bp | TCTGGTCGCGCGCGGGCACAGCCCGTCCGCAAAGTCTaGCGGCCAATAGGCCGCTGCTCTCTGGCTCCACGC | + |
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Preference number: 3 (lower is better) Translates to: SGRARAQPVRKV*RPIGRCSLAPR Trigger: GCGTGGAGCCAGAGAGCAGCGGCCTATTGGCCGGCAGACTTTGCGGACGGGCTGTGCCCGCGCGCGACCAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 72 bp | CAGCCCGTCCGCAAAGTCTGCCGGCCAATAGGCCGCTaGTCTCTGGCTCCACGCCAAAGCCAGGCGCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: QPVRKVCRPIGR*SLAPRQSQARH Trigger: GTGGCGCGCCTGGCTTTGGCGTGGAGCCAGAGAGCAGCGGCCTATTGGCCGGCAGACTTTGCGGACGGGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR TCA 72 bp | ACAGCTTTCAACCAAAGTGTCTGCTTTCCAGCGGGCTaGCCCTCTCCCCTTGCAACAGCCCTTCTTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: TAFNQSVCFPAG*PSPLATALLPA Trigger: GGCTGGAAGAAGGGCTGTTGCAAGGGGAGAGGGTCAGCCCGCTGGAAAGCAGACACTTTGGTTGAAAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 72 bp | AAGTGTCTGCTTTCCAGCGGGCTGACCCTCTCCCCTTaGAACAGCCCTTCTTCCAGCCTTAAGAAACACCAC | + |
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Preference number: 3 (lower is better) Translates to: KCLLSSGLTLSP*NSPSSSLKKHH Trigger: GTGGTGTTTCTTAAGGCTGGAAGAAGGGCTGTTGCAAGGGGAGAGGGTCAGCCCGCTGGAAAGCAGACACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR CCA 72 bp | AGTTCTTGGTCAATGTTAACGAAAAGTCCATCGTTCTaGTCGCGCGCGGGCACAGCCCGTCCGCAAAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SSWSMLTKSPSF*SRAGTARPQSL Trigger: CAGACTTTGCGGACGGGCTGTGCCCGCGCGCGACCAGAACGATGGACTTTTCGTTAACATTGACCAAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 72 bp | ACACCATCTTCTGGTGTACAGTCTGGACTTGTGTGTTaGCGGGGGAGAGAGTATGAGCCAATGATAGCATGC | + |
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Preference number: 3 (lower is better) Translates to: TPSSGVQSGLVC*RGREYEPMIAC Trigger: GCATGCTATCATTGGCTCATACTCTCTCCCCCGGCAACACACAAGTCCAGACTGTACACCAGAAGATGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR TCA 72 bp | ACAGTCTGGACTTGTGTGTTGCCGGGGGAGAGAGTATaGGCCAATGATAGCATGCAGGGTATCTATTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: TVWTCVLPGERV*ANDSMQGIYSY Trigger: GTAGGAATAGATACCCTGCATGCTATCATTGGCTCATACTCTCTCCCCCGGCAACACACAAGTCCAGACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 72 bp | TGTTGCCGGGGGAGAGAGTATGAGCCAATGATAGCATaGAGGGTATCTATTCCTACAATCAGACAGGGGACA | + |
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Preference number: 3 (lower is better) Translates to: CCRGREYEPMIA*RVSIPTIRQGT Trigger: TGTCCCCTGTCTGATTGTAGGAATAGATACCCTGCATGCTATCATTGGCTCATACTCTCTCCCCCGGCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGCACTACAGAAGCAATCTACAGTCTCTATTGCAGTTTGTAACCCCTCCCCCATCTTGTGTACCCTaGGCTTCAGTACTCGGACAC | + |
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Preference number: 3 (lower is better) Translates to: KEHYRSNLQSLLQFVTPPPSCVP*ASVLGH Trigger: GTGTCCGAGTACTGAAGCCAAGGGTACACAAGATGG...GGGAGGGGTTACAAACTGCAATAGAGACTGTAGATTGCTTCTGTAGTGCTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR CCA 72 bp | CACTCAGCTGTCACTTCATCTAGCTATCATTATCTATaGATAATGCAGCAAAGAGGTTGGGGGCTACTTTTC | + |
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Preference number: 3 (lower is better) Translates to: HSAVTSSSYHYL*IMQQRGWGLLF Trigger: GAAAAGTAGCCCCCAACCTCTTTGCTGCATTATCCATAGATAATGATAGCTAGATGAAGTGACAGCTGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR GCA 72 bp | AGGAGACACCTTTTGTTAAAAACTTCCATGGGTCCCTaGTTTGAGAATCAACAGCTAATTACTAAATCTTTC | + |
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Preference number: 3 (lower is better) Translates to: RRHLLLKTSMGP*FENQQLITKSF Trigger: GAAAGATTTAGTAATTAGCTGTTGATTCTCAAAGCAGGGACCCATGGAAGTTTTTAACAAAAGGTGTCTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | GCGGGCACAGCCCGTCCGCAAAGTCTGCCGGCCAATAGGCCGCTGCTCTCTGGCCCCGCTGACCGGCTGTaGCGCGGAGGTGACACTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGTARPQSLPANRPLLSGPADRL*RGGDTG Trigger: CCCAGTGTCACCTCCGCGGCACAGCCGGTCAGCGGG...GCCAGAGAGCAGCGGCCTATTGGCCGGCAGACTTTGCGGACGGGCTGTGCCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | CGCGCCACGTCCTTCCCACTCCAGCACACTGGGGGCGCCGTCAGGTCGCAACCCTTCTTGGCGCGGAGGTaGGGCTTCAGACTGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: RATSFPLQHTGGAVRSQPFLARR*GFRLPT Trigger: GGTGGGCAGTCTGAAGCCGCACCTCCGCGCCAAGAA...GGGTTGCGACCTGACGGCGCCCCCAGTGTGCTGGAGTGGGAAGGACGTGGCGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CCA 90 bp | GCGGGCACAGCCCGTCCGCAAAGTCTGCCGGCCAATAGGCCGCTGCTCTCTGGCGCACCGCTCTCGGACTaGAGGAACGAGGCGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: AGTARPQSLPANRPLLSGAPLSD*RNEALR Trigger: CCTCAACGCCTCGTTCCTCCAGTCCGAGAGCGGTGC...GCCAGAGAGCAGCGGCCTATTGGCCGGCAGACTTTGCGGACGGGCTGTGCCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CCA 90 bp | CGCTGCTCTCTGGCTCCACGCCAAAGCCAGGCGCGCCACGTCCTTCCCACTCCATGCACCGGGATCTGTTaGGGCAAGTGGTGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RCSLAPRQSQARHVLPTPCTGIC*GKWCGG Trigger: GCCGCCGCACCACTTGCCCCAACAGATCCCGGTGCA...TGGAGTGGGAAGGACGTGGCGCGCCTGGCTTTGGCGTGGAGCCAGAGAGCAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CCA 90 bp | CGCGCCACGTCCTTCCCACTCCAGCACACTGGGGGCGCCGTCAGGTCGCAACCCCGTCGGTCACGTTCTTaGGGCACAAGAACTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RATSFPLQHTGGAVRSQPRRSRS*GTRTGW Trigger: CCACCCAGTTCTTGTGCCCCAAGAACGTGACCGACG...GGGTTGCGACCTGACGGCGCCCCCAGTGTGCTGGAGTGGGAAGGACGTGGCGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR TCA 90 bp | TCGTTCTGGTCGCGCGCGGGCACAGCCCGTCCGCAAAGTCTGCCGGCCAATAGGGCTTCCTCTCTGCCTTaGTCCGCTCCTGAGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SFWSRAGTARPQSLPANRASSLP*SAPETP Trigger: TGGAGTCTCAGGAGCGGATCAAGGCAGAGAGGAAGC...CCTATTGGCCGGCAGACTTTGCGGACGGGCTGTGCCCGCGCGCGACCAGAACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | CGCTGCTCTCTGGCTCCACGCCAAAGCCAGGCGCGCCACGTCCTTCCCACTCCAGGTGTAGTGGTGATGTaGCCATTGCTGGACTGGATG | + |
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Preference number: 4 (lower is better) Translates to: RCSLAPRQSQARHVLPTPGVVVM*PLLDWM Trigger: CATCCAGTCCAGCAATGGGCACATCACCACTACACC...TGGAGTGGGAAGGACGTGGCGCGCCTGGCTTTGGCGTGGAGCCAGAGAGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | GTCAGGTCGCAACCCAGTCCATCTTGTGTACCCTTGGCTTCAGTACTCGGACACGGCGGCTGCTGCTGCTaGTGCGGCTGCGAGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: VRSQPSPSCVPLASVLGHGGCCC*CGCEGK Trigger: CTTTCCCTCGCAGCCGCAGCAGCAGCAGCAGCCGCC...GTGTCCGAGTACTGAAGCCAAGGGTACACAAGATGGACTGGGTTGCGACCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | CGCGCCACGTCCTTCCCACTCCAGCACACTGGGGGCGCCGTCAGGTCGCAACCCTGGTTCATGACTTTCTaGTTAAGCTGTGCCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: RATSFPLQHTGGAVRSQPWFMTF*LSCATC Trigger: ACAGGTGGCACAGCTTAAGCAGAAAGTCATGAACCA...GGGTTGCGACCTGACGGCGCCCCCAGTGTGCTGGAGTGGGAAGGACGTGGCGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR TCA 90 bp | CATGCAGGGTATCTATTCCTACAATCAGACAGGGGACACAGCTTTCACCCTAGTGCCAGCGCCTGCTACTaGGGCCACCGCGGGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HAGYLFLQSDRGHSFHPSASACY*GHRGSH Trigger: GTGGCTCCCGCGGTGGCCTCAGTAGCAGGCGCTGGC...ACTAGGGTGAAAGCTGTGTCCCCTGTCTGATTGTAGGAATAGATACCCTGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | TCGTTCTGGTCGCGCGCGGGCACAGCCCGTCCGCAAAGTCTGCCGGCCAATAGGCAAAACGTTTGCAACTaGTGCGTTAGCATGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SFWSRAGTARPQSLPANRQNVCN*CVSMSW Trigger: CCAACTCATGCTAACGCAGCAGTTGCAAACGTTTTG...CCTATTGGCCGGCAGACTTTGCGGACGGGCTGTGCCCGCGCGCGACCAGAACGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR TCA 90 bp | AACACCACACCATCTTCTGGTGTACAGTCTGGACTTGTGTGTTGCCGGGGGAGAGTGCCACCTGTTCCCTaGGCATGTTGGCCGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: NTTPSSGVQSGLVCCRGRVPPVP*ACWPWM Trigger: CATCCACGGCCAACATGCTCAGGGAACAGGTGGCAC...TCTCCCCCGGCAACACACAAGTCCAGACTGTACACCAGAAGATGGTGTGGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| 3UTR CAA 72 bp | CACTGGGGGCGCCGTCAGGTCGCAACCCAGTCCATCTaGTGTACCCTTGGCTTCAGTACTCGGACACTTTTT | + |
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Preference number: 4 (lower is better) Translates to: HWGRRQVATQSI*CTLGFSTRTLF Trigger: AAAAAGTGTCCGAGTACTGAAGCCAAGGGTACACAAGATGGACTGGGTTGCGACCTGACGGCGCCCCCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | GGTCGCAACCCAGTCCATCTTGTGTACCCTTGGCTTCAGTACTCGGACACTTTTAGCGTGTTCTGGCTATaGAGTTCAGCCAGGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GRNPVHLVYPWLQYSDTFSVFWL*SSARAR Trigger: GCGCGCCCTGGCTGAACTGCATAGCCAGAACACGCT...AAAAGTGTCCGAGTACTGAAGCCAAGGGTACACAAGATGGACTGGGTTGCGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTATTTACAAACACTGGGCAGGACACCCAAACAAACAAACATGGAATAACCCGGCGACGCCAGCTTaGGCAGCCCGACGTCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SLIYKHWAGHPNKQTWNNPATPA*AARRRA Trigger: CGCCCGACGTCGGGCTGCTCAAGCTGGCGTCGCCGG...GTTATTCCATGTTTGTTTGTTTGGGTGTCCTGCCCAGTGTTTGTAAATAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | GGTCGCAACCCAGTCCATCTTGTGTACCCTTGGCTTCAGTACTCGGACACTTTTCATGTTGGCCGTGGATaGCAGCTCGGAGTTTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: GRNPVHLVYPWLQYSDTFHVGRG*QLGVLR Trigger: GCGCAAAACTCCGAGCTGGCATCCACGGCCAACATG...AAAAGTGTCCGAGTACTGAAGCCAAGGGTACACAAGATGGACTGGGTTGCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR TCA 90 bp | CATGCAGGGTATCTATTCCTACAATCAGACAGGGGACACAGCTTTCACCCTAGTGGAGGAACGAGGCGTTaGGGGCATCGTCGTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HAGYLFLQSDRGHSFHPSGGTRR*GHRRRR Trigger: CCTTCTACGACGATGCCCTCAACGCCTCGTTCCTCC...ACTAGGGTGAAAGCTGTGTCCCCTGTCTGATTGTAGGAATAGATACCCTGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | CATGCAGGGTATCTATTCCTACAATCAGACAGGGGACACAGCTTTCACCCTAGTACTTGGAGGCGGCAATaGGGTTCCTCATGCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HAGYLFLQSDRGHSFHPSTWRRQ*GSSCAS Trigger: GGAAGCGCATGAGGAACCGCATTGCCGCCTCCAAGT...ACTAGGGTGAAAGCTGTGTCCCCTGTCTGATTGTAGGAATAGATACCCTGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CCA 90 bp | AACACCACACCATCTTCTGGTGTACAGTCTGGACTTGTGTGTTGCCGGGGGAGATGCGTTAGCATGAGTTaGCACCCACTGTTAACGTGG | + |
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Preference number: 4 (lower is better) Translates to: NTTPSSGVQSGLVCCRGRCVSMS*HPLLTW Trigger: CCACGTTAACAGTGGGTGCCAACTCATGCTAACGCA...TCTCCCCCGGCAACACACAAGTCCAGACTGTACACCAGAAGATGGTGTGGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | GTTGTCAGATTCAAAGTTGGAAGGAGACACCTTTTGTTAAAAACTTCCATGGGTGGTGCGGCTTCAGACTaGCCACCGGGTCGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VVRFKVGRRHLLLKTSMGGAASD*PPGRPG Trigger: ACCTGGCCGACCCGGTGGGCAGTCTGAAGCCGCACC...ACCCATGGAAGTTTTTAACAAAAGGTGTCTCCTTCCAACTTTGAATCTGACAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CCA 90 bp | AAGGAGCACTACAGAAGCAATCTACAGTCTCTATTGCAGTTTGTAACCCCTCCCTGCCCATTGCTGGACTaGATGATCAGGCGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KEHYRSNLQSLLQFVTPPCPLLD*MIRRSS Trigger: GCTGGAGCGCCTGATCATCCAGTCCAGCAATGGGCA...GGGAGGGGTTACAAACTGCAATAGAGACTGTAGATTGCTTCTGTAGTGCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR TCA 90 bp | GGTCATCTTTTTCTAGGAGTTGTCAGATTCAAAGTTGGAAGGAGACACCTTTTGCGACGTCGGGCGACGTaGGAAGGTCCGAGTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GHLFLGVVRFKVGRRHLLRRRAT*EGPSSW Trigger: CCAAGAACTCGGACCTTCTCACGTCGCCCGACGTCG...CAAAAGGTGTCTCCTTCCAACTTTGAATCTGACAACTCCTAGAAAAAGATGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR TCA 90 bp | GGTCATCTTTTTCTAGGAGTTGTCAGATTCAAAGTTGGAAGGAGACACCTTTTGCATTGCTGGACTGGATaGTCAGGCGCTCCAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: GHLFLGVVRFKVGRRHLLHCWTG*SGAPAP Trigger: CGGAGCTGGAGCGCCTGATCATCCAGTCCAGCAATG...CAAAAGGTGTCTCCTTCCAACTTTGAATCTGACAACTCCTAGAAAAAGATGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | TTTCTAGGAGTTGTCAGATTCAAAGTTGGAAGGAGACACCTTTTGTTAAAAACTTGCTGCTGCTGCGGCTaGGAGGGAAAGGCCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: FLGVVRFKVGRRHLLLKTCCCCG*EGKASP Trigger: CGGGCTGGCCTTTCCCTCGCAGCCGCAGCAGCAGCA...AGTTTTTAACAAAAGGTGTCTCCTTCCAACTTTGAATCTGACAACTCCTAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CCA 90 bp | AACACCACACCATCTTCTGGTGTACAGTCTGGACTTGTGTGTTGCCGGGGGAGACACCCACTGTTAACGTaGTTCATGACTTTCTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: NTTPSSGVQSGLVCCRGRHPLLT*FMTFCL Trigger: TAAGCAGAAAGTCATGAACCACGTTAACAGTGGGTG...TCTCCCCCGGCAACACACAAGTCCAGACTGTACACCAGAAGATGGTGTGGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | CATGCAGGGTATCTATTCCTACAATCAGACAGGGGACACAGCTTTCACCCTAGTGCCAGCTCGGAGTTTTaGGCTTTCAAGGTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: HAGYLFLQSDRGHSFHPSASSEF*AFKVFT Trigger: AGTGAAAACCTTGAAAGCGCAAAACTCCGAGCTGGC...ACTAGGGTGAAAGCTGTGTCCCCTGTCTGATTGTAGGAATAGATACCCTGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CCA 90 bp | CTCTTATTTACAAACACTGGGCAGGACACCCAAACAAACAAACATGGAATAACTGAAGGTCCGAGTTCTTaGCGCGGAGGTGCGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFTNTGQDTQTNKHGITEGPSS*RGGAAS Trigger: TGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTTC...AGTTATTCCATGTTTGTTTGTTTGGGTGTCCTGCCCAGTGTTTGTAAATAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTATTTACAAACACTGGGCAGGACACCCAAACAAACAAACATGGAATAACTTGGGGCACAAGAACTaGGTGGGGGTCGGTGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: SLIYKHWAGHPNKQTWNNLGHKN*VGVGVV Trigger: CACTACACCGACCCCCACCCAGTTCTTGTGCCCCAA...GTTATTCCATGTTTGTTTGTTTGGGTGTCCTGCCCAGTGTTTGTAAATAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | TTTCTAGGAGTTGTCAGATTCAAAGTTGGAAGGAGACACCTTTTGTTAAAAACTCATGCGCTTCCTCTCTaGCTTGATCCGCTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLGVVRFKVGRRHLLLKTHALPL*LDPLLR Trigger: TCTCAGGAGCGGATCAAGGCAGAGAGGAAGCGCATG...AGTTTTTAACAAAAGGTGTCTCCTTCCAACTTTGAATCTGACAACTCCTAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | TCTCTTATTTACAAACACTGGGCAGGACACCCAAACAAACAAACATGGAATAACAACGTTTGCAACTGCTaGGTTAGCATGAGTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLIYKHWAGHPNKQTWNNNVCNC*VSMSWH Trigger: GTGCCAACTCATGCTAACGCAGCAGTTGCAAACGTT...GTTATTCCATGTTTGTTTGTTTGGGTGTCCTGCCCAGTGTTTGTAAATAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR GCA 90 bp | TATCATTATCTATGGATAATGCAGCAAAGAGGTTGGGGGCTACTTTTCAATAGTTTTCTGCTTAAGCTGTaGCACCTGTTCCCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YHYLWIMQQRGWGLLFNSFLLKL*HLFPEH Trigger: ATGCTCAGGGAACAGGTGGCACAGCTTAAGCAGAAA...ACTATTGAAAAGTAGCCCCCAACCTCTTTGCTGCATTATCCATAGATAATGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CAA 90 bp | CGTCCGCAAAGTCTGCCGGCCAATAGGCCGCTGCTCTCTGGCTCCACGCCAAAGTCCGGCGACGCCAGCTaGAGCAGCCCGACGTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPQSLPANRPLLSGSTPKSGDAS*SSPTSG Trigger: GCCCGACGTCGGGCTGCTCAAGCTGGCGTCGCCGGA...CTTTGGCGTGGAGCCAGAGAGCAGCGGCCTATTGGCCGGCAGACTTTGCGGACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 90 bp | ACCGGCTGTGCCGCGGAGGTGACACTGGGAAGCGTGTTCTGGCTATaGAGTTCAGCCAGGGCGCGCACGAAGCCCTCGGCGAAGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGCAAEVTLGSVFWL*SSARARTKPSAKPS Trigger: GGAGGGCTTCGCCGAGGGCTTCGTGCGCGCCCTGGCTGAACTGCATAGCCAGAACACGCTTCCCAGTGTCACCTCCGCGGCACAGCCGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CCA 90 bp | CCGCTGACCGGCTGTGCCGCGGAGGTGACACTGGGAAGCGTGTTCTaGCTATGCAGTTCAGCCAGGGCGCGCACGAAGCCCTCGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLTGCAAEVTLGSVF*LCSSARARTKPSAK Trigger: CTTCGCCGAGGGCTTCGTGCGCGCCCTGGCTGAACTGCATAGCCAGAACACGCTTCCCAGTGTCACCTCCGCGGCACAGCCGGTCAGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 90 bp | CCGACGTCGGGCGACGTGAGAAGGTCCGAGTTCTTGGCGCGGAGGTaGGGCTTCAGACTGCCCACCGGGTCGGCCAGGTTCAAGGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PTSGDVRRSEFLARR*GFRLPTGSARFKVM Trigger: CATGACCTTGAACCTGGCCGACCCGGTGGGCAGTCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTTCTCACGTCGCCCGACGTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CCA 90 bp | AACTGGGTGGGGGTCGGTGTAGTGGTGATGTGCCCATTGCTGGACTaGATGATCAGGCGCTCCAGCTCCGGCGACGCCAGCTTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NWVGVGVVVMCPLLD*MIRRSSSGDASLSS Trigger: GCTGCTCAAGCTGGCGTCGCCGGAGCTGGAGCGCCTGATCATCCAGTCCAGCAATGGGCACATCACCACTACACCGACCCCCACCCAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCCCACTCCAGCACACTGGGGGCGCCGTCAGGTCGCAACCCAGTCCATCTTGTTCCCTGAGCATGTaGGCCGTGGATGCCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SFPLQHTGGAVRSQPSPSCSLSM*AVDASS Trigger: CGAGCTGGCATCCACGGCCAACATGCTCAGGGAACA...AGATGGACTGGGTTGCGACCTGACGGCGCCCCCAGTGTGCTGGAGTGGGAAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CAA 90 bp | TTGGTCAATGTTAACGAAAAGTCCATCGTTCTGGTCGCGCGCGGGCACAGCCCGGTGGTGATGTGCCCATaGCTGGACTGGATGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVNVNEKSIVLVARGHSPVVMCP*LDWMIR Trigger: CCTGATCATCCAGTCCAGCAATGGGCACATCACCAC...CGGGCTGTGCCCGCGCGCGACCAGAACGATGGACTTTTCGTTAACATTGACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CAA 90 bp | CATGCAGGGTATCTATTCCTACAATCAGACAGGGGACACAGCTTTCACCCTAGTAGAAGGTCCGAGTTCTaGGCGCGGAGGTGCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HAGYLFLQSDRGHSFHPSRRSEF*ARRCGF Trigger: GAAGCCGCACCTCCGCGCCAAGAACTCGGACCTTCT...ACTAGGGTGAAAGCTGTGTCCCCTGTCTGATTGTAGGAATAGATACCCTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS-3UTR CAA 90 bp | AACACCACACCATCTTCTGGTGTACAGTCTGGACTTGTGTGTTGCCGGGGGAGATGCCAGCTCGGAGTTTaGCGCTTTCAAGGTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NTTPSSGVQSGLVCCRGRCQLGV*RFQGFH Trigger: GTGAAAACCTTGAAAGCGCAAAACTCCGAGCTGGCA...TCTCCCCCGGCAACACACAAGTCCAGACTGTACACCAGAAGATGGTGTGGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 90 bp | GTTAGCATGAGTTGGCACCCACTGTTAACGTGGTTCATGACTTTCTaGTTAAGCTGTGCCACCTGTTCCCTGAGCATGTTGGCCGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VSMSWHPLLTWFMTF*LSCATCSLSMLAVD Trigger: ATCCACGGCCAACATGCTCAGGGAACAGGTGGCACAGCTTAAGCAGAAAGTCATGAACCACGTTAACAGTGGGTGCCAACTCATGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 72 bp | CGCGGGAGCCACCATGCCCGCCCCGCTGACCGGCTGTaGCGCGGAGGTGACACTGGGAAGCGTGTTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RGSHHARPADRL*RGGDTGKRVLA Trigger: AGCCAGAACACGCTTCCCAGTGTCACCTCCGCGGCACAGCCGGTCAGCGGGGCGGGCATGGTGGCTCCCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CAA 72 bp | CAGGGCTTGCAGCCGCGGGTGCTGCACCGGGATCTGTaGGGGCAAGTGGTGCGGCGGCTGAGGCGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QGLQPRVLHRDL*GQVVRRLRRLL Trigger: CAGCAGCCGCCTCAGCCGCCGCACCACTTGCCCCAACAGATCCCGGTGCAGCACCCGCGGCTGCAAGCCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS TCA 72 bp | TGCACCGGGATCTGTTGGGGCAAGTGGTGCGGCGGCTaGGGCGGCTGCTGCTGCTGCTGCGGCTGCGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CTGICWGKWCGG*GGCCCCCGCEG Trigger: TCCCTCGCAGCCGCAGCAGCAGCAGCAGCCGCCTCAGCCGCCGCACCACTTGCCCCAACAGATCCCGGTGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CAA 90 bp | AGCTTGAGCAGCCCGACGTCGGGCGACGTGAGAAGGTCCGAGTTCTaGGCGCGGAGGTGCGGCTTCAGACTGCCCACCGGGTCGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSSPTSGDVRRSEF*ARRCGFRLPTGSAR Trigger: CCTGGCCGACCCGGTGGGCAGTCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTTCTCACGTCGCCCGACGTCGGGCTGCTCAAGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CAA 72 bp | AGCCCGACGTCGGGCGACGTGAGAAGGTCCGAGTTCTaGGCGCGGAGGTGCGGCTTCAGACTGCCCACCGGG | + |
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Preference number: 6 (lower is better) Translates to: SPTSGDVRRSEF*ARRCGFRLPTG Trigger: CCCGGTGGGCAGTCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTTCTCACGTCGCCCGACGTCGGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 72 bp | GGCGACGTGAGAAGGTCCGAGTTCTTGGCGCGGAGGTaGGGCTTCAGACTGCCCACCGGGTCGGCCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GDVRRSEFLARR*GFRLPTGSARF Trigger: GAACCTGGCCGACCCGGTGGGCAGTCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTTCTCACGTCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 72 bp | GCCGCGGAGGTGACACTGGGAAGCGTGTTCTGGCTATaGAGTTCAGCCAGGGCGCGCACGAAGCCCTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AAEVTLGSVFWL*SSARARTKPSA Trigger: CGCCGAGGGCTTCGTGCGCGCCCTGGCTGAACTGCATAGCCAGAACACGCTTCCCAGTGTCACCTCCGCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 72 bp | GTCTGCGGCTCTTCCTTCAGGGCTTGCAGCCGCGGGTaGTGCACCGGGATCTGTTGGGGCAAGTGGTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VCGSSFRACSRG*CTGICWGKWCG Trigger: GCCGCACCACTTGCCCCAACAGATCCCGGTGCAGCACCCGCGGCTGCAAGCCCTGAAGGAAGAGCCGCAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CAA 72 bp | TGGATGATCAGGCGCTCCAGCTCCGGCGACGCCAGCTaGAGCAGCCCGACGTCGGGCGACGTGAGAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WMIRRSSSGDAS*SSPTSGDVRRS Trigger: GGACCTTCTCACGTCGCCCGACGTCGGGCTGCTCAAGCTGGCGTCGCCGGAGCTGGAGCGCCTGATCATCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CCA 72 bp | GGCTGTGCCGCGGAGGTGACACTGGGAAGCGTGTTCTaGCTATGCAGTTCAGCCAGGGCGCGCACGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GCAAEVTLGSVF*LCSSARARTKP Trigger: GGGCTTCGTGCGCGCCCTGGCTGAACTGCATAGCCAGAACACGCTTCCCAGTGTCACCTCCGCGGCACAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 72 bp | GGTCCGAGTTCTTGGCGCGGAGGTGCGGCTTCAGACTaGCCACCGGGTCGGCCAGGTTCAAGGTCATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPSSWRGGAASD*PPGRPGSRSCS Trigger: AGAGCATGACCTTGAACCTGGCCGACCCGGTGGGCAGTCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CCA 72 bp | GCCGAGCGATCCGCTCCAGCTTCCTTTTCCGGCACTTaGAGGCGGCAATGCGGTTCCTCATGCGCTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AERSAPASFSGT*RRQCGSSCASS Trigger: AGAGGAAGCGCATGAGGAACCGCATTGCCGCCTCCAAGTGCCGGAAAAGGAAGCTGGAGCGGATCGCTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CAA 72 bp | AGCCGAGCGATCCGCTCCAGCTTCCTTTTCCGGCACTaGGAGGCGGCAATGCGGTTCCTCATGCGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRAIRSSFLFRH*EAAMRFLMRFL Trigger: GAGGAAGCGCATGAGGAACCGCATTGCCGCCTCCAAGTGCCGGAAAAGGAAGCTGGAGCGGATCGCTCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CCA 72 bp | TCCTGCTCGTCGGTCACGTTCTTGGGGCACAAGAACTaGGTGGGGGTCGGTGTAGTGGTGATGTGCCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SCSSVTFLGHKN*VGVGVVVMCPL Trigger: CAATGGGCACATCACCACTACACCGACCCCCACCCAGTTCTTGTGCCCCAAGAACGTGACCGACGAGCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS CAA 90 bp | TTTTCCTCTAGCCGAGCGATCCGCTCCAGCTTCCTTTTCCGGCACTaGGAGGCGGCAATGCGGTTCCTCATGCGCTTCCTCTCTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSSRAIRSSFLFRH*EAAMRFLMRFLSAL Trigger: CAAGGCAGAGAGGAAGCGCATGAGGAACCGCATTGCCGCCTCCAAGTGCCGGAAAAGGAAGCTGGAGCGGATCGCTCGGCTAGAGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS TCA 72 bp | CGTAGGCACCGCTCTCGGACTGGAGGAACGAGGCGTTaGGGGCATCGTCGTAGAAGGTCGTTTCCATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRHRSRTGGTRR*GHRRRRSFPSL Trigger: CAAAGATGGAAACGACCTTCTACGACGATGCCCTCAACGCCTCGTTCCTCCAGTCCGAGAGCGGTGCCTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 72 bp | CTGTGCCACCTGTTCCCTGAGCATGTTGGCCGTGGATaGCAGCTCGGAGTTTTGCGCTTTCAAGGTTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LCHLFPEHVGRG*QLGVLRFQGFH Trigger: GTGAAAACCTTGAAAGCGCAAAACTCCGAGCTGGCATCCACGGCCAACATGCTCAGGGAACAGGTGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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| CDS GCA 72 bp | AGTTGGCACCCACTGTTAACGTGGTTCATGACTTTCTaGTTAAGCTGTGCCACCTGTTCCCTGAGCATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWHPLLTWFMTF*LSCATCSLSML Trigger: CAACATGCTCAGGGAACAGGTGGCACAGCTTAAGCAGAAAGTCATGAACCACGTTAACAGTGGGTGCCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107094.2 |
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