Pregenerated sensors for JPT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024165Ensembl transcript IDs: ENSMUST00000024981.9, ENSMUST00000233067.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGGATGGGAGATGAATAAGGCAGCCACTGCTGTGGACCACTGTTaGAGGTCCCCATATCCTCCCAGCCATCCAGGCCAGCAGGTGGCG | + |
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Preference number: 1 (lower is better) Translates to: EGWEMNKAATAVDHC*RSPYPPSHPGQQVA Trigger: CGCCACCTGCTGGCCTGGATGGCTGGGAGGATATGGGGACCTGCAACAGTGGTCCACAGCAGTGGCTGCCTTATTCATCTCCCATCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR GCA 90 bp | TGGTTGATAAAGCCATGGTCAGAGCCCTCAACAGACCGGGTAGGATaGAGAGCCCGGCAGGTGGCTCCTGCAGGCACTTGTAGGTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: WLIKPWSEPSTDRVG*RARQVAPAGTCRSV Trigger: CACTGACCTACAAGTGCCTGCAGGAGCCACCTGCCGGGCTCTGCATCCTACCCGGTCTGTTGAGGGCTCTGACCATGGCTTTATCAACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CCA 90 bp | GATACAGGGCATCTGAAGAGGAAAACTCTTTGGTTGATAAAGCCATaGTCAGAGCCCTCAACAGACCGGGTAGGATGCAGAGCCCGGCAG | + |
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Preference number: 1 (lower is better) Translates to: DTGHLKRKTLWLIKP*SEPSTDRVGCRARQ Trigger: CTGCCGGGCTCTGCATCCTACCCGGTCTGTTGAGGGCTCTGACCATGGCTTTATCAACCAAAGAGTTTTCCTCTTCAGATGCCCTGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 90 bp | TCTGCCCATGACAACAAGGCTTATGAGCAGTCAACCCCACACGCATaGCAAACCCTCTCCCACCCCAGCTCATTTGAGTTAAAGGAAACA | + |
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Preference number: 1 (lower is better) Translates to: SAHDNKAYEQSTPHA*QTLSHPSSFELKET Trigger: TGTTTCCTTTAACTCAAATGAGCTGGGGTGGGAGAGGGTTTGTCATGCGTGTGGGGTTGACTGCTCATAAGCCTTGTTGTCATGGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CCA 90 bp | TATAGGAGCAAAGCAAGACAGGAGAACAGGAATCCACCCAATACCTaGACATATATGGCCCTGCAGAGGCCAGAGACCTTCTGTACAGGA | + |
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Preference number: 1 (lower is better) Translates to: YRSKARQENRNPPNT*TYMALQRPETFCTG Trigger: TCCTGTACAGAAGGTCTCTGGCCTCTGCAGGGCCATATATGTCCAGGTATTGGGTGGATTCCTGTTCTCCTGTCTTGCTTTGCTCCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CCA 90 bp | GTTACTTGGCTTCAGGATACAGGGCATCTGAAGAGGAAAACTCTTTaGTTGATAAAGCCATGGTCAGAGCCCTCAACAGACCGGGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: VTWLQDTGHLKRKTL*LIKPWSEPSTDRVG Trigger: TCCTACCCGGTCTGTTGAGGGCTCTGACCATGGCTTTATCAACCAAAGAGTTTTCCTCTTCAGATGCCCTGTATCCTGAAGCCAAGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CCA 90 bp | GCATCAGAACCCATTGTAGATGGTTGTGACCCAACATGTGGTTGCTaGGAATTGAACCTAGGTCTTCTGGAACAACCAGTGCTCTTAACC | + |
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Preference number: 1 (lower is better) Translates to: ASEPIVDGCDPTCGC*ELNLGLLEQPVLLT Trigger: GGTTAAGAGCACTGGTTGTTCCAGAAGACCTAGGTTCAATTCCCAGCAACCACATGTTGGGTCACAACCATCTACAATGGGTTCTGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR TCA 90 bp | GTCAACCCCACACGCATGACAAACCCTCTCCCACCCCAGCTCATTTaGGTTAAAGGAAACACTAACATTCAATACTCTATCTCTGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: VNPTRMTNPLPPQLI*VKGNTNIQYSISVW Trigger: CCAGACAGAGATAGAGTATTGAATGTTAGTGTTTCCTTTAACTCAAATGAGCTGGGGTGGGAGAGGGTTTGTCATGCGTGTGGGGTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 90 bp | CTACAGAGTGACATAATGGGAGAAGGAGAGGAGACATTAGGGTTCTaGGGTATCTCAGAGGGGGAAGCATTTAGTGATAGGCATTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LQSDIMGEGEETLGF*GISEGEAFSDRHFL Trigger: CAGGAAATGCCTATCACTAAATGCTTCCCCCTCTGAGATACCTCAGAACCCTAATGTCTCCTCTCCTTCTCCCATTATGTCACTCTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 90 bp | GGAATTGAACCTAGGTCTTCTGGAACAACCAGTGCTCTTAACCACTaGGCCATCTTTCCTGCCCTTGAACTACTTTCTTGCTTACGTGGT | + |
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Preference number: 1 (lower is better) Translates to: GIEPRSSGTTSALNH*AIFPALELLSCLRG Trigger: ACCACGTAAGCAAGAAAGTAGTTCAAGGGCAGGAAAGATGGCTCAGTGGTTAAGAGCACTGGTTGTTCCAGAAGACCTAGGTTCAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR GCA 90 bp | AGAACTGAACAGAGGTCCTCCCCTCTAAGAGCAAGTACTCTCAACTaGAAGCCACCAGATCTTACTCTTAACCAACACAGTCCTTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: RTEQRSSPLRASTLN*KPPDLTLNQHSPSC Trigger: ACAAGAAGGACTGTGTTGGTTAAGAGTAAGATCTGGTGGCTTGCAGTTGAGAGTACTTGCTCTTAGAGGGGAGGACCTCTGTTCAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR TCA 90 bp | TTCCTGCCAAAACACTTAGTATCCTGGCTCAAGGAGCACTGTTTATaGGCAGGGTCAAGAAGTCTAAAGCTTTCTAAAGGCAGCTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: FLPKHLVSWLKEHCL*AGSRSLKLSKGSSC Trigger: ACAAGAGCTGCCTTTAGAAAGCTTTAGACTTCTTGACCCTGCTCATAAACAGTGCTCCTTGAGCCAGGATACTAAGTGTTTTGGCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 90 bp | AGATTGTTTTGTAACATGCCTCAGACCTTAGCACAACTCACTCCATaGTGGAAGTCCAATTCAGGCTGTAAAACTCGGCATGTAGATAGC | + |
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Preference number: 1 (lower is better) Translates to: RLFCNMPQTLAQLTP*WKSNSGCKTRHVDS Trigger: GCTATCTACATGCCGAGTTTTACAGCCTGAATTGGACTTCCATCATGGAGTGAGTTGTGCTAAGGTCTGAGGCATGTTACAAAACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR TCA 90 bp | GTTGACTGCTACCAAAAAGAGCAGTCATGTTTCAATACTACAGAGTaGCATAATGGGAGAAGGAGAGGAGACATTAGGGTTCTGAGGTAT | + |
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Preference number: 1 (lower is better) Translates to: VDCYQKEQSCFNTTE*HNGRRRGDIRVLRY Trigger: ATACCTCAGAACCCTAATGTCTCCTCTCCTTCTCCCATTATGTCACTCTGTAGTATTGAAACATGACTGCTCTTTTTGGTAGCAGTCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CCA 90 bp | CCATTTGAGTTGTTAGAGAATTACATACATGTAAGACCTGTTACTTaGCTTCAGGATACAGGGCATCTGAAGAGGAAAACTCTTTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: PFELLENYIHVRPVT*LQDTGHLKRKTLWL Trigger: CAACCAAAGAGTTTTCCTCTTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTAATTCTCTAACAACTCAAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 90 bp | CTAAATTCCAAAATAGAGCTCATGATGACTGAACCACAAACCATTTaGGTTGTTAGAGAATTACATACATGTAAGACCTGTTACTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LNSKIELMMTEPQTI*VVRELHTCKTCYLA Trigger: AGCCAAGTAACAGGTCTTACATGTATGTAATTCTCTAACAACTCAAATGGTTTGTGGTTCAGTCATCATGAGCTCTATTTTGGAATTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCCCGGCAGGTGGCTCCTGCAGGCACTTGTAGGTCAGTGTGTCGGTGTGGAACCCCGCAAGGGCTaGACAGGGACATCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AEPGRWLLQALVGQCVGVEPRKG*TGTSAW Trigger: CCAGGCAGATGTCCCTGTTCAGCCCTTGCGGGGTTC...CACACCGACACACTGACCTACAAGTGCCTGCAGGAGCCACCTGCCGGGCTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCCCGGCAGGTGGCTCCTGCAGGCACTTGTAGGTCAGTGTGTCGGTGTGCCACCCCAGCTCATTTaGGTTAAAGGAAACACTAAC | + |
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Preference number: 2 (lower is better) Translates to: AEPGRWLLQALVGQCVGVPPQLI*VKGNTN Trigger: GTTAGTGTTTCCTTTAACTCAAATGAGCTGGGGTGG...CACACCGACACACTGACCTACAAGTGCCTGCAGGAGCCACCTGCCGGGCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCCCGGCAGGTGGCTCCTGCAGGCACTTGTAGGTCAGTGTGTCGGTGTGAAGGAGCACTGTTTATaGGCAGGGTCAAGAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: AEPGRWLLQALVGQCVGVKEHCL*AGSRSL Trigger: TAGACTTCTTGACCCTGCTCATAAACAGTGCTCCTT...CACACCGACACACTGACCTACAAGTGCCTGCAGGAGCCACCTGCCGGGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCAGAAGCAGCAGCACTCAGAATCCCTTTCCACAGATGCACCCCAGAGGGGTACAGGAAGAACCATaGACAGGGAGAACCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: RSRSSSTQNPFPQMHPRGVQEEP*TGRTPH Trigger: GTGAGGGGTTCTCCCTGTTCATGGTTCTTCCTGTAC...CCCTCTGGGGTGCATCTGTGGAAAGGGATTCTGAGTGCTGCTGCTTCTGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGTTCTGACCTTCCTGCCAAAACACTTAGTATCCTGGCTCAAGGAGCACTGTTCAACCCCACACGCATaGCAAACCCTCTCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: TVLTFLPKHLVSWLKEHCSTPHA*QTLSHP Trigger: GGGGTGGGAGAGGGTTTGTCATGCGTGTGGGGTTGA...ACAGTGCTCCTTGAGCCAGGATACTAAGTGTTTTGGCAGGAAGGTCAGAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTACCTGGAACTTGGTATaGCTGGCTTCTGCCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLTWNLV*LASAIQ Trigger: CTGAATGGCAGAAGCCAGGCATACCAAGTTCCAGGT...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGATTCACACTCTGAGTCCAGCTGTAGCAGAAGATAGAAGGATGGGAGATGCAGAGCCCGGCAGGTaGCTCCTGCAGGCACTTGTA | + |
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Preference number: 2 (lower is better) Translates to: LQIHTLSPAVAEDRRMGDAEPGR*LLQALV Trigger: TACAAGTGCCTGCAGGAGCCACCTGCCGGGCTCTGC...ATCTCCCATCCTTCTATCTTCTGCTACAGCTGGACTCAGAGTGTGAATCTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CAA 90 bp | CTGGAACAACCAGTGCTCTTAACCACTGAGCCATCTTTCCTGCCCTaGAACTACTTTCTTGCTTACGTGGTTTTCCCGGTCCCCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LEQPVLLTTEPSFLP*NYFLAYVVFPVPKA Trigger: GGCTTTGGGGACCGGGAAAACCACGTAAGCAAGAAAGTAGTTCAAGGGCAGGAAAGATGGCTCAGTGGTTAAGAGCACTGGTTGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTAGCACAACTCACTCCATaGTGGAAGTCCAATTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: WFSRSPKPSKAAQIHILLAQLTP*WKSNSG Trigger: GCCTGAATTGGACTTCCATCATGGAGTGAGTTGTGC...TAAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTTGTGAGCAGCCATATGGATGGCCAGAACTGAACAGAGGTCCTCCCCTCGGTATGCCTGGCTTCTaGCATTCAGTATACACCATT | + |
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Preference number: 2 (lower is better) Translates to: VSCEQPYGWPELNRGPPLGMPGF*HSVYTI Trigger: AATGGTGTATACTGAATGGCAGAAGCCAGGCATACC...GAGGGGAGGACCTCTGTTCAGTTCTGGCCATCCATATGGCTGCTCACAACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR CAA 90 bp | GTGAATGCAGGATTGCCACTTTTCCAAGATTTACTGAGGACATTTTaGGCACCTACTGTGAAGCGCTCTGTGGGCGGGAGAAGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VNAGLPLFQDLLRTF*APTVKRSVGGRSRS Trigger: GCTTCTGCTTCTCCCGCCCACAGAGCGCTTCACAGTAGGTGCCAAAAATGTCCTCAGTAAATCTTGGAAAAGTGGCAATCCTGCATTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CAA 90 bp | ACACACATTCCTGGTGTCTGTGAAGGCCAGAAGAGGGCATCTGAATaGGAGTTAAGAAGGTCAGTTGTGAGCAGCCATATGGATGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: THIPGVCEGQKRASE*ELRRSVVSSHMDGQ Trigger: CTGGCCATCCATATGGCTGCTCACAACTGACCTTCTTAACTCCAATTCAGATGCCCTCTTCTGGCCTTCACAGACACCAGGAATGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR-3UTR GCA 90 bp | TTACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCGCAAGTACTCTCAACTaGAAGCCACCAGATCTTACT | + |
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Preference number: 2 (lower is better) Translates to: LRGFPGPQSLPRQLRFTSASTLN*KPPDLT Trigger: AGTAAGATCTGGTGGCTTGCAGTTGAGAGTACTTGC...GGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR CAA 90 bp | TGTTACTTGGCTTCAGGATACAGGGCATCTGAAGAGGAAAACTCTTaGGTTGATAAAGCCATGGTCAGAGCCCTCAACAGACCGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: CYLASGYRASEEENS*VDKAMVRALNRPGR Trigger: CCTACCCGGTCTGTTGAGGGCTCTGACCATGGCTTTATCAACCAAAGAGTTTTCCTCTTCAGATGCCCTGTATCCTGAAGCCAAGTAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR GCA 90 bp | TTACAGATTCACACTCTGAGTCCAGCTGTAGCAGAAGATAGAAGGATGGGAGATCTGAACAGGGACATCTaGCTGGCAGGAAGTGACGTG | + |
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Preference number: 2 (lower is better) Translates to: LQIHTLSPAVAEDRRMGDLNRDI*LAGSDV Trigger: CACGTCACTTCCTGCCAGGCAGATGTCCCTGTTCAG...ATCTCCCATCCTTCTATCTTCTGCTACAGCTGGACTCAGAGTGTGAATCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CAA 90 bp | CCTGCAGGCACTTGTAGGTCAGTGTGTCGGTGTGTGAATGCAGGATaGCCACTTTTCCAAGATTTACTGAGGACATTTTTGGCACCTACT | + |
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Preference number: 2 (lower is better) Translates to: PAGTCRSVCRCVNAG*PLFQDLLRTFLAPT Trigger: AGTAGGTGCCAAAAATGTCCTCAGTAAATCTTGGAAAAGTGGCAATCCTGCATTCACACACCGACACACTGACCTACAAGTGCCTGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CAA 90 bp | GAACCCATTGTAGATGGTTGTGACCCAACATGTGGTTGCTGGGAATaGAACCTAGGTCTTCTGGAACAACCAGTGCTCTTAACCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: EPIVDGCDPTCGCWE*NLGLLEQPVLLTTE Trigger: CTCAGTGGTTAAGAGCACTGGTTGTTCCAGAAGACCTAGGTTCAATTCCCAGCAACCACATGTTGGGTCACAACCATCTACAATGGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR-3UTR GCA 90 bp | TACATACATGTAAGACCTGTTACTTGGCTTCAGGATACAGGGCATCTGAAGAGGATGGCCCAGCTCTTCTaGCTTCCCCAGAACTTTACA | + |
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Preference number: 2 (lower is better) Translates to: YIHVRPVTWLQDTGHLKRMAQLF*LPQNFT Trigger: TGTAAAGTTCTGGGGAAGGCAGAAGAGCTGGGCCAT...CCTCTTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTCCTCACAATTTCATATaGAAAGTCTTACTGTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLPHNFI*KVLLCS Trigger: GCTACACAGTAAGACTTTGCATATGAAATTGTGAGG...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| 3UTR-3UTR TCA 90 bp | TTACAGATTCACACTCTGAGTCCAGCTGTAGCAGAAGATAGAAGGATGGGAGATAGGATACAGGGCATCTaGAGAGGAAAACTCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LQIHTLSPAVAEDRRMGDRIQGI*RGKLFG Trigger: ACCAAAGAGTTTTCCTCTTCAGATGCCCTGTATCCT...ATCTCCCATCCTTCTATCTTCTGCTACAGCTGGACTCAGAGTGTGAATCTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR GCA 90 bp | TATAGGAGCAAAGCAAGACAGGAGAACAGGAATCCACCCAATACCTGGACATATAAGGAACAACCCACATaGAAATCTGGCACATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: YRSKARQENRNPPNTWTYKEQPT*KSGTSG Trigger: TCCTGATGTGCCAGATTTGCATGTGGGTTGTTCCTT...ATATGTCCAGGTATTGGGTGGATTCCTGTTCTCCTGTCTTGCTTTGCTCCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CAA 90 bp | ACAGGTATTTATAAGAAGCTGACACTAAAAACACCTTTCCATACATaGGTAAAGCAGCCAACGAACCCAACATCCTTCAGCAGGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TGIYKKLTLKTPFHT*VKQPTNPTSFSRLS Trigger: GGAAAGCCTGCTGAAGGATGTTGGGTTCGTTGGCTGCTTTACCAATGTATGGAAAGGTGTTTTTAGTGTCAGCTTCTTATAAATACCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR TCA 90 bp | TACATACATGTAAGACCTGTTACTTGGCTTCAGGATACAGGGCATCTGAAGAGGTTCAATACTACAGAGTaGCATAATGGGAGAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: YIHVRPVTWLQDTGHLKRFNTTE*HNGRRR Trigger: TCTCCTTCTCCCATTATGTCACTCTGTAGTATTGAA...CCTCTTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR-3UTR TCA 90 bp | TTACAGATTCACACTCTGAGTCCAGCTGTAGCAGAAGATAGAAGGATGGGAGATTTTTCCAAGATTTACTaGGGACATTTTTGGCACCTA | + |
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Preference number: 2 (lower is better) Translates to: LQIHTLSPAVAEDRRMGDFSKIY*GHFWHL Trigger: TAGGTGCCAAAAATGTCCTCAGTAAATCTTGGAAAA...ATCTCCCATCCTTCTATCTTCTGCTACAGCTGGACTCAGAGTGTGAATCTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR GCA 72 bp | AAGCCATGGTCAGAGCCCTCAACAGACCGGGTAGGATaGAGAGCCCGGCAGGTGGCTCCTGCAGGCACTTGT | + |
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Preference number: 3 (lower is better) Translates to: KPWSEPSTDRVG*RARQVAPAGTC Trigger: ACAAGTGCCTGCAGGAGCCACCTGCCGGGCTCTGCATCCTACCCGGTCTGTTGAGGGCTCTGACCATGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR GCA 72 bp | GAGATGAATAAGGCAGCCACTGCTGTGGACCACTGTTaGAGGTCCCCATATCCTCCCAGCCATCCAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: EMNKAATAVDHC*RSPYPPSHPGQ Trigger: CTGGCCTGGATGGCTGGGAGGATATGGGGACCTGCAACAGTGGTCCACAGCAGTGGCTGCCTTATTCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 72 bp | ATATCCTCCCAGCCATCCAGGCCAGCAGGTGGCGCTTaGAGCTTTTCTCTCACAGGGCTAAGAGCAGAATCA | + |
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Preference number: 3 (lower is better) Translates to: ISSQPSRPAGGA*SFSLTGLRAES Trigger: TGATTCTGCTCTTAGCCCTGTGAGAGAAAAGCTTCAAGCGCCACCTGCTGGCCTGGATGGCTGGGAGGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CCA 72 bp | GCCAGCAGCCTGCTAACACAAGGACAAGAAAGACCCTaGAACCCTTCTGTTAATGGCCCAGCTCTTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: ASSLLTQGQERP*NPSVNGPALLP Trigger: AGGCAGAAGAGCTGGGCCATTAACAGAAGGGTTCCAGGGTCTTTCTTGTCCTTGTGTTAGCAGGCTGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 72 bp | TGCAGAGGCCAGAGACCTTCTGTACAGGAAGAACCATaGACAGGGAGAACCCCTCACAGGTGCAGAACTAAG | + |
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Preference number: 3 (lower is better) Translates to: CRGQRPSVQEEP*TGRTPHRCRTK Trigger: CTTAGTTCTGCACCTGTGAGGGGTTCTCCCTGTTCATGGTTCTTCCTGTACAGAAGGTCTCTGGCCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 72 bp | GACAACAAGGCTTATGAGCAGTCAACCCCACACGCATaGCAAACCCTCTCCCACCCCAGCTCATTTGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: DNKAYEQSTPHA*QTLSHPSSFEL Trigger: TAACTCAAATGAGCTGGGGTGGGAGAGGGTTTGTCATGCGTGTGGGGTTGACTGCTCATAAGCCTTGTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR TCA 72 bp | AGGTCAGTTGTGAGCAGCCATATGGATGGCCAGAACTaGACAGAGGTCCTCCCCTCTAAGAGCAAGTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: RSVVSSHMDGQN*TEVLPSKSKYS Trigger: AGAGTACTTGCTCTTAGAGGGGAGGACCTCTGTTCAGTTCTGGCCATCCATATGGCTGCTCACAACTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR GCA 72 bp | ACAGGAATCCACCCAATACCTGGACATATATGGCCCTaGAGAGGCCAGAGACCTTCTGTACAGGAAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: TGIHPIPGHIWP*RGQRPSVQEEP Trigger: TGGTTCTTCCTGTACAGAAGGTCTCTGGCCTCTGCAGGGCCATATATGTCCAGGTATTGGGTGGATTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGATTCACACTCTGAGTCCAGCTGTAGCAGAAGATAGAAGGATGGGAGATGCCAGCAGGTGGCGCTaGAAGCTTTTCTCTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQIHTLSPAVAEDRRMGDASRWR*KLFSHR Trigger: CCTGTGAGAGAAAAGCTTCAAGCGCCACCTGCTGGC...ATCTCCCATCCTTCTATCTTCTGCTACAGCTGGACTCAGAGTGTGAATCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR TCA 72 bp | ACCCTTCCACCCAGGACAGGACTGAGAATAACGGCCTaGCTTTCTGTTGACTGCTACCAAAAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TLPPRTGLRITA*LSVDCYQKEQS Trigger: TGACTGCTCTTTTTGGTAGCAGTCAACAGAAAGTCAGGCCGTTATTCTCAGTCCTGTCCTGGGTGGAAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAAAGCAAGACAGGAGAACAGGAATCCACCCAATACCTGGACATATATGGCGGCCTGACTTTCTGTaGACTGCTACCAAAAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GAKQDRRTGIHPIPGHIWRPDFL*TATKKS Trigger: GCTCTTTTTGGTAGCAGTCAACAGAAAGTCAGGCCG...CCATATATGTCCAGGTATTGGGTGGATTCCTGTTCTCCTGTCTTGCTTTGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR GCA 72 bp | GACCCTGGAACCCTTCTGTTAATGGCCCAGCTCTTCTaGCTTCCCCAGAACTTTACAGATGTGTTTCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: DPGTLLLMAQLF*LPQNFTDVFHR Trigger: TCTATGAAACACATCTGTAAAGTTCTGGGGAAGGCAGAAGAGCTGGGCCATTAACAGAAGGGTTCCAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR GCA 72 bp | CAGAGGTCCTCCCCTCTAAGAGCAAGTACTCTCAACTaGAAGCCACCAGATCTTACTCTTAACCAACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: QRSSPLRASTLN*KPPDLTLNQHS Trigger: ACTGTGTTGGTTAAGAGTAAGATCTGGTGGCTTGCAGTTGAGAGTACTTGCTCTTAGAGGGGAGGACCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR CCA 72 bp | CATCTGAAGAGGAAAACTCTTTGGTTGATAAAGCCATaGTCAGAGCCCTCAACAGACCGGGTAGGATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLKRKTLWLIKP*SEPSTDRVGCR Trigger: TCTGCATCCTACCCGGTCTGTTGAGGGCTCTGACCATGGCTTTATCAACCAAAGAGTTTTCCTCTTCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR CCA 72 bp | CCCATTGTAGATGGTTGTGACCCAACATGTGGTTGCTaGGAATTGAACCTAGGTCTTCTGGAACAACCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PIVDGCDPTCGC*ELNLGLLEQPV Trigger: CACTGGTTGTTCCAGAAGACCTAGGTTCAATTCCCAGCAACCACATGTTGGGTCACAACCATCTACAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCACCTACTCTAAGAGATaGTTTTGTAACATGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRGFPGPQSLPRQLRFTSTYSKR*FCNMPQ Trigger: CTGAGGCATGTTACAAAACAATCTCTTAGAGTAGGT...GGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR TCA 72 bp | GACATAATGGGAGAAGGAGAGGAGACATTAGGGTTCTaGGGTATCTCAGAGGGGGAAGCATTTAGTGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: DIMGEGEETLGF*GISEGEAFSDR Trigger: CCTATCACTAAATGCTTCCCCCTCTGAGATACCTCAGAACCCTAATGTCTCCTCTCCTTCTCCCATTATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR CCA 72 bp | CTTCAGGATACAGGGCATCTGAAGAGGAAAACTCTTTaGTTGATAAAGCCATGGTCAGAGCCCTCAACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LQDTGHLKRKTL*LIKPWSEPSTD Trigger: GTCTGTTGAGGGCTCTGACCATGGCTTTATCAACCAAAGAGTTTTCCTCTTCAGATGCCCTGTATCCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR TCA 72 bp | TGTAACATGCCTCAGACCTTAGCACAACTCACTCCATaGTGGAAGTCCAATTCAGGCTGTAAAACTCGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: CNMPQTLAQLTP*WKSNSGCKTRH Trigger: ATGCCGAGTTTTACAGCCTGAATTGGACTTCCATCATGGAGTGAGTTGTGCTAAGGTCTGAGGCATGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR GCA 72 bp | ACAGGCTGCTACCACAGACCTGGCCATGATTTTAGGTaGAGTATGGGACAACTCAGAAGATTGGTGTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGCYHRPGHDFR*SMGQLRRLVYK Trigger: TTTATACACCAATCTTCTGAGTTGTCCCATACTGCACCTAAAATCATGGCCAGGTCTGTGGTAGCAGCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGTCAGTGTGTCGGTGTGTGAATGCAGGATTGCCACTTTTCCAAGATTTATTTAAGAGTTTCTGTTaGTGTGTGTCTCCTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CRSVCRCVNAGLPLFQDLFKSFC*CVSPPA Trigger: GGCTGGAGGAGACACACACAAACAGAAACTCTTAAA...TAAATCTTGGAAAAGTGGCAATCCTGCATTCACACACCGACACACTGACCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR-3UTR CAA 90 bp | GAATTGAACCTAGGTCTTCTGGAACAACCAGTGCTCTTAACCACTGAGCCATCTAAGAGGGCATCTGAATaGGAGTTAAGAAGGTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ELNLGLLEQPVLLTTEPSKRASE*ELRRSV Trigger: AACTGACCTTCTTAACTCCAATTCAGATGCCCTCTT...AGATGGCTCAGTGGTTAAGAGCACTGGTTGTTCCAGAAGACCTAGGTTCAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR TCA 72 bp | CAGGACAGGACTGAGAATAACGGCCTGACTTTCTGTTaGCTGCTACCAAAAAGAGCAGTCATGTTTCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: QDRTENNGLTFC*LLPKRAVMFQY Trigger: GTATTGAAACATGACTGCTCTTTTTGGTAGCAGTCAACAGAAAGTCAGGCCGTTATTCTCAGTCCTGTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR TCA 72 bp | ACACGCATGACAAACCCTCTCCCACCCCAGCTCATTTaGGTTAAAGGAAACACTAACATTCAATACTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: TRMTNPLPPQLI*VKGNTNIQYSI Trigger: GATAGAGTATTGAATGTTAGTGTTTCCTTTAACTCAAATGAGCTGGGGTGGGAGAGGGTTTGTCATGCGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR TCA 72 bp | AAACACTTAGTATCCTGGCTCAAGGAGCACTGTTTATaGGCAGGGTCAAGAAGTCTAAAGCTTTCTAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KHLVSWLKEHCL*AGSRSLKLSKG Trigger: GCCTTTAGAAAGCTTTAGACTTCTTGACCCTGCTCATAAACAGTGCTCCTTGAGCCAGGATACTAAGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR-3UTR CAA 90 bp | GAATTACATACATGTAAGACCTGTTACTTGGCTTCAGGATACAGGGCATCTGAAAGTGCAGACTCCACTTaGTCTTTAAGAGTTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ELHTCKTCYLASGYRASESADST*SLRVSV Trigger: AACAGAAACTCTTAAAGACAAAGTGGAGTCTGCACT...TTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR TCA 72 bp | GATCTTACTCTTAACCAACACAGTCCTTCTTGTAGCTaGAGTCCAGAGCACTTAAAACATTCCTCACAATTT | + |
|
Preference number: 3 (lower is better) Translates to: DLTLNQHSPSCS*SPEHLKHSSQF Trigger: AAATTGTGAGGAATGTTTTAAGTGCTCTGGACTTCAGCTACAAGAAGGACTGTGTTGGTTAAGAGTAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR CCA 72 bp | TTGTTAGAGAATTACATACATGTAAGACCTGTTACTTaGCTTCAGGATACAGGGCATCTGAAGAGGAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LLENYIHVRPVT*LQDTGHLKRKT Trigger: AGTTTTCCTCTTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTAATTCTCTAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR TCA 72 bp | AAAATAGAGCTCATGATGACTGAACCACAAACCATTTaGGTTGTTAGAGAATTACATACATGTAAGACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KIELMMTEPQTI*VVRELHTCKTC Trigger: ACAGGTCTTACATGTATGTAATTCTCTAACAACTCAAATGGTTTGTGGTTCAGTCATCATGAGCTCTATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCCCGGCAGGTGGCTCCTGCAGGCACTTGTAGGTCAGTGTGTCGGTGTGAGGAGAGGCTGGATTTaGCTCCTGGTGGGTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEPGRWLLQALVGQCVGVRRGWI*LLVGSG Trigger: TCCTGAACCCACCAGGAGGCAAATCCAGCCTCTCCT...CACACCGACACACTGACCTACAAGTGCCTGCAGGAGCCACCTGCCGGGCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTACCTGGAACCCGACTTaGCAGCTTGGCTGTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLTWNPT*QLGCPR Trigger: GCGCGGACAGCCAAGCTGGCAAGTCGGGTTCCAGGT...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAGAAGCAGCAGCACTCAGAATCCCTTTCCACAGATGCACCCCAGAGGGGGGCTTGTTTGGGTGTaGCAGAGGCGCAGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSRSSSTQNPFPQMHPRGGLVWV*QRRSGS Trigger: ACTGCCACTGCGCCTCTGGCACACCCAAACAAGCCC...CCCTCTGGGGTGCATCTGTGGAAAGGGATTCTGAGTGCTGCTGCTTCTGCTTCT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR TCA 90 bp | CCCAACAGCCAGCAGCCTGCTAACACAAGGACAAGAAAGACCCTGGAACCCTTCGAGGCGCAGTGGCAGTaGCTGGGGACCCAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: PNSQQPANTRTRKTLEPFEAQWQ*LGTQIC Trigger: ACATATTTGGGTCCCCAGTCACTGCCACTGCGCCTC...GAAGGGTTCCAGGGTCTTTCTTGTCCTTGTGTTAGCAGGCTGCTGGCTGTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGTTGTGAGCAGCCATATGGATGGCCAGAACTGAACAGAGGTCCTCCCCTCGAGGCGCAGTGGCAGTaGCTGGGGACCCAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSCEQPYGWPELNRGPPLEAQWQ*LGTQIC Trigger: ACATATTTGGGTCCCCAGTCACTGCCACTGCGCCTC...GAGGGGAGGACCTCTGTTCAGTTCTGGCCATCCATATGGCTGCTCACAACTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAGAAGCAGCAGCACTCAGAATCCCTTTCCACAGATGCACCCCAGAGGGTTCAGGACTTTGTTGTaGGAGCGAGGTCGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSRSSSTQNPFPQMHPRGFRTLL*ERGRGP Trigger: GGGGCCACGACCTCGCTCCCACAACAAAGTCCTGAA...CCCTCTGGGGTGCATCTGTGGAAAGGGATTCTGAGTGCTGCTGCTTCTGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTTTCAGGACTTTGTTGTaGGAGCGAGGTCGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLFRTLL*ERGRGP Trigger: GGGGCCACGACCTCGCTCCCACAACAAAGTCCTGAA...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR CAA 72 bp | CATATCCTCCCAGCCATCCAGGCCAGCAGGTGGCGCTaGAAGCTTTTCTCTCACAGGGCTAAGAGCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: HILPAIQASRWR*KLFSHRAKSRI Trigger: GATTCTGCTCTTAGCCCTGTGAGAGAAAAGCTTCAAGCGCCACCTGCTGGCCTGGATGGCTGGGAGGATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAGAAGCAGCAGCACTCAGAATCCCTTTCCACAGATGCACCCCAGAGGGCTTCCTTTGTCACTCTaGTCTCCTCTGGGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSRSSSTQNPFPQMHPRGLPLSL*SPLGVE Trigger: CTCCACACCCAGAGGAGAGCAGAGTGACAAAGGAAG...CCCTCTGGGGTGCATCTGTGGAAAGGGATTCTGAGTGCTGCTGCTTCTGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR GCA 90 bp | ACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCCTTCCTTTGTCACTCTaGTCTCCTCTGGGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWFSRSPKPSKAAQIHILLPLSL*SPLGVE Trigger: CTCCACACCCAGAGGAGAGCAGAGTGACAAAGGAAG...GAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTAGGAGAGGCTGGATTTaGCTCCTGGTGGGTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLRRGWI*LLVGSG Trigger: TCCTGAACCCACCAGGAGGCAAATCCAGCCTCTCCT...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAGAAGCAGCAGCACTCAGAATCCCTTTCCACAGATGCACCCCAGAGGGACTTCCTTTGCCTCCTaGAGGATTTGTCCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSRSSSTQNPFPQMHPRGTSFAS*RICPLG Trigger: CCCAAGAGGACAAATCCTCCAGGAGGCAAAGGAAGT...CCCTCTGGGGTGCATCTGTGGAAAGGGATTCTGAGTGCTGCTGCTTCTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CCA 90 bp | TACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTGCTCTCCTCTGGGTGTaGAGTCTGTTGCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YVVFPVPKAFQGSSDSHPALLWV*SLLQLS Trigger: TGAAAGCTGCAACAGACTCCACACCCAGAGGAGAGC...AGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAGAAGCAGCAGCACTCAGAATCCCTTTCCACAGATGCACCCCAGAGGGAATAGAAGGAGAGGCTaGATTTGCCTCCTGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSRSSSTQNPFPQMHPRGNRRRG*ICLLVG Trigger: ACCCACCAGGAGGCAAATCCAGCCTCTCCTTCTATT...CCCTCTGGGGTGCATCTGTGGAAAGGGATTCTGAGTGCTGCTGCTTCTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR GCA 90 bp | TACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTGGGTGTGGAGTCTGTTaGAGCTTTCAGGTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: YVVFPVPKAFQGSSDSHPGCGVC*SFQVRL Trigger: AAGTCTGACCTGAAAGCTGCAACAGACTCCACACCC...AGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGTTAGAGAGGAGGGACCAGAGCATCCCAGTTTACCCCACAATGTATGTCCGCAGTGGCAGTGACTaGGGACCCAAATATGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EQLERRDQSIPVYPTMYVRSGSD*GPKYVT Trigger: AGTGACATATTTGGGTCCCCAGTCACTGCCACTGCG...GACATACATTGTGGGGTAAACTGGGATGCTCTGGTCCCTCCTCTCTAACTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CCA 90 bp | TTACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCGCAAAACATGATCCTTaGGCTTGTTTGGGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGFPGPQSLPRQLRFTSAKHDP*ACLGVP Trigger: TGGCACACCCAAACAAGCCCAAGGATCATGTTTTGC...GGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR TCA 90 bp | ACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCCCTATTAGGCTTGCTTaGAGAAATACCTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWFSRSPKPSKAAQIHILPIRLA*RNTFFW Trigger: CCAGAAGAAGGTATTTCTTCAAGCAAGCCTAATAGG...GAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAGTTAGAGAGGAGGGACCAGAGCATCCCAGTTTACCCCACAATGTATGTCTCACACAGCAAAACATaGTCCTTGGGCTTGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQLERRDQSIPVYPTMYVSHSKT*SLGLFG Trigger: CCCAAACAAGCCCAAGGATCATGTTTTGCTGTGTGA...GACATACATTGTGGGGTAAACTGGGATGCTCTGGTCCCTCCTCTCTAACTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR CAA 72 bp | GGATTGCCACTTTTCCAAGATTTACTGAGGACATTTTaGGCACCTACTGTGAAGCGCTCTGTGGGCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLPLFQDLLRTF*APTVKRSVGGR Trigger: TCTCCCGCCCACAGAGCGCTTCACAGTAGGTGCCAAAAATGTCCTCAGTAAATCTTGGAAAAGTGGCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR CAA 72 bp | CCTGGTGTCTGTGAAGGCCAGAAGAGGGCATCTGAATaGGAGTTAAGAAGGTCAGTTGTGAGCAGCCATATG | + |
|
Preference number: 4 (lower is better) Translates to: PGVCEGQKRASE*ELRRSVVSSHM Trigger: CATATGGCTGCTCACAACTGACCTTCTTAACTCCAATTCAGATGCCCTCTTCTGGCCTTCACAGACACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| 3UTR CAA 72 bp | CCAGTGCTCTTAACCACTGAGCCATCTTTCCTGCCCTaGAACTACTTTCTTGCTTACGTGGTTTTCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVLLTTEPSFLP*NYFLAYVVFPV Trigger: GACCGGGAAAACCACGTAAGCAAGAAAGTAGTTCAAGGGCAGGAAAGATGGCTCAGTGGTTAAGAGCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR TCA 90 bp | TTACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCATGCTCTACTTCTTTTaGGCTTCCTTTGTCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRGFPGPQSLPRQLRFTSMLYFF*ASFVTL Trigger: CAGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCAT...GGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAAGAGCAGTCATGTTTCAATACTACAGAGTGACATAATGGGAGAAGGAACCTGGAACCCGACTTaGCAGCTTGGCTGTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TKKSSHVSILQSDIMGEGTWNPT*QLGCPR Trigger: GCGCGGACAGCCAAGCTGGCAAGTCGGGTTCCAGGT...TCCTTCTCCCATTATGTCACTCTGTAGTATTGAAACATGACTGCTCTTTTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCAAAGCAAGACAGGAGAACAGGAATCCACCCAATACCTGGACATATATGGGGGTGTGGAGTCTGTTaGAGCTTTCAGGTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GAKQDRRTGIHPIPGHIWGCGVC*SFQVRL Trigger: AAGTCTGACCTGAAAGCTGCAACAGACTCCACACCC...CCATATATGTCCAGGTATTGGGTGGATTCCTGTTCTCCTGTCTTGCTTTGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CCA 90 bp | TATAGGAGCAAAGCAAGACAGGAGAACAGGAATCCACCCAATACCTGGACATATCACTCTGCTCTCCTCTaGGTGTGGAGTCTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRSKARQENRNPPNTWTYHSALL*VWSLLQ Trigger: CTGCAACAGACTCCACACCCAGAGGAGAGCAGAGTG...ATATGTCCAGGTATTGGGTGGATTCCTGTTCTCCTGTCTTGCTTTGCTCCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CCA 90 bp | GAATTGAACCTAGGTCTTCTGGAACAACCAGTGCTCTTAACCACTGAGCCATCTACTTCCTTTGCCTCCTaGAGGATTTGTCCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELNLGLLEQPVLLTTEPSTSFAS*RICPLG Trigger: CCCAAGAGGACAAATCCTCCAGGAGGCAAAGGAAGT...AGATGGCTCAGTGGTTAAGAGCACTGGTTGTTCCAGAAGACCTAGGTTCAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR GCA 90 bp | TTACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCCGAAAATATTAGATaGCATCCTATTAGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRGFPGPQSLPRQLRFTSSENIR*HPIRLA Trigger: AGCAAGCCTAATAGGATGGCATCTAATATTTTCGGA...GGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CCA 90 bp | ATTCAGTATACACCATTACCTGGGGCTATACTTCCCTCATCTTTCCAAACACATCACTCTGCTCTCCTCTaGGTGTGGAGTCTGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQYTPLPGAILPSSFQTHHSALL*VWSLLQ Trigger: CTGCAACAGACTCCACACCCAGAGGAGAGCAGAGTG...ATGTGTTTGGAAAGATGAGGGAAGTATAGCCCCAGGTAATGGTGTATACTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CCA 90 bp | TGTAGGTCAGTGTGTCGGTGTGTGAATGCAGGATTGCCACTTTTCCAAGATTTAGCTGGATTTGCCTCCTaGTGGGTTCAGGACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CRSVCRCVNAGLPLFQDLAGFAS*WVQDFV Trigger: AACAAAGTCCTGAACCCACCAGGAGGCAAATCCAGC...TAAATCTTGGAAAAGTGGCAATCCTGCATTCACACACCGACACACTGACCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CAA 72 bp | GCTTCAGGATACAGGGCATCTGAAGAGGAAAACTCTTaGGTTGATAAAGCCATGGTCAGAGCCCTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASGYRASEEENS*VDKAMVRALNR Trigger: TCTGTTGAGGGCTCTGACCATGGCTTTATCAACCAAAGAGTTTTCCTCTTCAGATGCCCTGTATCCTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTTCTGACCTTCCTGCCAAAACACTTAGTATCCTGGCTCAAGGAGCACTGTATGCTCTACTTCTTTTaGGCTTCCTTTGTCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVLTFLPKHLVSWLKEHCMLYFF*ASFVTL Trigger: CAGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCAT...ACAGTGCTCCTTGAGCCAGGATACTAAGTGTTTTGGCAGGAAGGTCAGAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR GCA 90 bp | GGGAGAAGGAGAGGAGACATTAGGGTTCTGAGGTATCTCAGAGGGGGAAGCATTTCCGAAAATATTAGATaGCATCCTATTAGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRRRGDIRVLRYLRGGSISENIR*HPIRLA Trigger: AGCAAGCCTAATAGGATGGCATCTAATATTTTCGGA...AATGCTTCCCCCTCTGAGATACCTCAGAACCCTAATGTCTCCTCTCCTTCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CCA 90 bp | TGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTATTTAGGTTCTTCAGTTaGTCCGAAAATATTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: WFSRSPKPSKAAQIHILLFRFFS*SENIRC Trigger: GCATCTAATATTTTCGGACCAACTGAAGAACCTAAA...TAAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CCA 90 bp | ACCAAAAAGAGCAGTCATGTTTCAATACTACAGAGTGACATAATGGGAGAAGGAGCTCTCCTCTGGGTGTaGAGTCTGTTGCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKKSSHVSILQSDIMGEGALLWV*SLLQLS Trigger: TGAAAGCTGCAACAGACTCCACACCCAGAGGAGAGC...TCCTTCTCCCATTATGTCACTCTGTAGTATTGAAACATGACTGCTCTTTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CCA 90 bp | ATTCAGTATACACCATTACCTGGGGCTATACTTCCCTCATCTTTCCAAACACATGCTGGATTTGCCTCCTaGTGGGTTCAGGACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IQYTPLPGAILPSSFQTHAGFAS*WVQDFV Trigger: AACAAAGTCCTGAACCCACCAGGAGGCAAATCCAGC...ATGTGTTTGGAAAGATGAGGGAAGTATAGCCCCAGGTAATGGTGTATACTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CCA 90 bp | ATTCAGTATACACCATTACCTGGGGCTATACTTCCCTCATCTTTCCAAACACATAATAGAAGGAGAGGCTaGATTTGCCTCCTGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQYTPLPGAILPSSFQTHNRRRG*ICLLVG Trigger: ACCCACCAGGAGGCAAATCCAGCCTCTCCTTCTATT...ATGTGTTTGGAAAGATGAGGGAAGTATAGCCCCAGGTAATGGTGTATACTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGATTCACACTCTGAGTCCAGCTGTAGCAGAAGATAGAAGGATGGGAGATCCTATTAGGCTTGCTTaGAGAAATACCTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQIHTLSPAVAEDRRMGDPIRLA*RNTFFW Trigger: CCAGAAGAAGGTATTTCTTCAAGCAAGCCTAATAGG...ATCTCCCATCCTTCTATCTTCTGCTACAGCTGGACTCAGAGTGTGAATCTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CCA 90 bp | GAATTACATACATGTAAGACCTGTTACTTGGCTTCAGGATACAGGGCATCTGAAGCAAAACATGATCCTTaGGCTTGTTTGGGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELHTCKTCYLASGYRASEAKHDP*ACLGVP Trigger: TGGCACACCCAAACAAGCCCAAGGATCATGTTTTGC...TTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR CAA 72 bp | ACTTGTAGGTCAGTGTGTCGGTGTGTGAATGCAGGATaGCCACTTTTCCAAGATTTACTGAGGACATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCRSVCRCVNAG*PLFQDLLRTFL Trigger: CAAAAATGTCCTCAGTAAATCTTGGAAAAGTGGCAATCCTGCATTCACACACCGACACACTGACCTACAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| 3UTR CAA 72 bp | TATAAGAAGCTGACACTAAAAACACCTTTCCATACATaGGTAAAGCAGCCAACGAACCCAACATCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKKLTLKTPFHT*VKQPTNPTSFS Trigger: GCTGAAGGATGTTGGGTTCGTTGGCTGCTTTACCAATGTATGGAAAGGTGTTTTTAGTGTCAGCTTCTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CCA 90 bp | TACATACATGTAAGACCTGTTACTTGGCTTCAGGATACAGGGCATCTGAAGAGGTTTAGGTTCTTCAGTTaGTCCGAAAATATTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YIHVRPVTWLQDTGHLKRFRFFS*SENIRC Trigger: GCATCTAATATTTTCGGACCAACTGAAGAACCTAAA...CCTCTTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| 3UTR CAA 72 bp | GTTGTTAGAGAATTACATACATGTAAGACCTGTTACTaGGCTTCAGGATACAGGGCATCTGAAGAGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVRELHTCKTCY*ASGYRASEEEN Trigger: GTTTTCCTCTTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTAATTCTCTAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS CCA 90 bp | CTGGACTTCCGAAAAGATCGCTCGATTCTCCTCCCGGGGGCTTCATaGACCTGGAACCCGACTTGCCAGCTTGGCTGTCCGCGCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDFRKDRSILLPGAS*TWNPTCQLGCPRPG Trigger: TCCAGGGCGCGGACAGCCAAGCTGGCAAGTCGGGTTCCAGGTCCATGAAGCCCCCGGGAGGAGAATCGAGCGATCTTTTCGGAAGTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS CCA 90 bp | TTTGCCTCCTGGTGGGTTCAGGACTTTGTTGTGGGAGCGAGGTCGTaGCCCCAGTCTGGGTTCATGACTGTCAACTGTAGGTGTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FASWWVQDFVVGARS*PQSGFMTVNCRCGL Trigger: GAGCCCACACCTACAGTTGACAGTCATGAACCCAGACTGGGGCCACGACCTCGCTCCCACAACAAAGTCCTGAACCCACCAGGAGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGTTAGAGAGGAGGGACCAGAGCATCCCAGTTTACCCCACAATGTATGTCGACCTGGAACCCGACTaGCCAGCTTGGCTGTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: EQLERRDQSIPVYPTMYVDLEPD*PAWLSA Trigger: CGCGGACAGCCAAGCTGGCAAGTCGGGTTCCAGGTC...GACATACATTGTGGGGTAAACTGGGATGCTCTGGTCCCTCCTCTCTAACTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CAA 90 bp | TACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTGATCCTTGGGCTTGTTaGGGTGTGCCAGAGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YVVFPVPKAFQGSSDSHPDPWAC*GVPEAQ Trigger: CTGCGCCTCTGGCACACCCAAACAAGCCCAAGGATC...AGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTGGGTTCAGGACTTTGTaGTGGGAGCGAGGTCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLGFRTL*WERGRG Trigger: GCCACGACCTCGCTCCCACAACAAAGTCCTGAACCC...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | CCCAACAGCCAGCAGCCTGCTAACACAAGGACAAGAAAGACCCTGGAACCCTTCAAGGAGAGGCTGGATTaGCCTCCTGGTGGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PNSQQPANTRTRKTLEPFKERLD*PPGGFR Trigger: CCTGAACCCACCAGGAGGCAAATCCAGCCTCTCCTT...GAAGGGTTCCAGGGTCTTTCTTGTCCTTGTGTTAGCAGGCTGCTGGCTGTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CAA 90 bp | GAGCAGTTAGAGAGGAGGGACCAGAGCATCCCAGTTTACCCCACAATGTATGTCGATCCTTGGGCTTGTTaGGGTGTGCCAGAGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EQLERRDQSIPVYPTMYVDPWAC*GVPEAQ Trigger: CTGCGCCTCTGGCACACCCAAACAAGCCCAAGGATC...GACATACATTGTGGGGTAAACTGGGATGCTCTGGTCCCTCCTCTCTAACTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCCGGCAGGTGGCTCCTGCAGGCACTTGTAGGTCAGTGTGTCGGTGTGCATGCTCTACTTCTTTaGAGCTTCCTTTGTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: AEPGRWLLQALVGQCVGVHALLL*SFLCHS Trigger: AGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCATG...CACACCGACACACTGACCTACAAGTGCCTGCAGGAGCCACCTGCCGGGCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CAA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTGGTGGGTTCAGGACTTaGTTGTGGGAGCGAGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLGGFRT*LWERGR Trigger: ACGACCTCGCTCCCACAACAAAGTCCTGAACCCACC...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTAAGGAGAGGCTGGATTaGCCTCCTGGTGGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLKERLD*PPGGFR Trigger: CCTGAACCCACCAGGAGGCAAATCCAGCCTCTCCTT...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | GAATTGAACCTAGGTCTTCTGGAACAACCAGTGCTCTTAACCACTGAGCCATCTGACCTGGAACCCGACTaGCCAGCTTGGCTGTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ELNLGLLEQPVLLTTEPSDLEPD*PAWLSA Trigger: CGCGGACAGCCAAGCTGGCAAGTCGGGTTCCAGGTC...AGATGGCTCAGTGGTTAAGAGCACTGGTTGTTCCAGAAGACCTAGGTTCAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTTGGGTGTGGAGTCTGTaGCAGCTTTCAGGTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLWVWSL*QLSGQT Trigger: AGTCTGACCTGAAAGCTGCAACAGACTCCACACCCA...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS TCA 90 bp | GCTTTCAGGTCAGACTTAGAGTCTTCACCTTCACACAGCAAAACATaGTCCTTGGGCTTGTTTGGGTGTGCCAGAGGCGCAGTGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AFRSDLESSPSHSKT*SLGLFGCARGAVAV Trigger: CACTGCCACTGCGCCTCTGGCACACCCAAACAAGCCCAAGGATCATGTTTTGCTGTGTGAAGGTGAAGACTCTAAGTCTGACCTGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTTGTGAGCAGCCATATGGATGGCCAGAACTGAACAGAGGTCCTCCCCTCTCTTTTGAGCTTCCTTaGTCACTCTGCTCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSCEQPYGWPELNRGPPLSFELP*SLCSPL Trigger: CAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGA...GAGGGGAGGACCTCTGTTCAGTTCTGGCCATCCATATGGCTGCTCACAACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | TGTAGGTCAGTGTGTCGGTGTGTGAATGCAGGATTGCCACTTTTCCAAGATTTAGGGTTCAGGACTTTGTaGTGGGAGCGAGGTCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CRSVCRCVNAGLPLFQDLGFRTL*WERGRG Trigger: GCCACGACCTCGCTCCCACAACAAAGTCCTGAACCC...TAAATCTTGGAAAAGTGGCAATCCTGCATTCACACACCGACACACTGACCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS TCA 90 bp | AACTGTAGGTGTGGGCTCCGGTATCTTTGCATGCTCTACTTCTTTTaGGCTTCCTTTGTCACTCTGCTCTCCTCTGGGTGTGGAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NCRCGLRYLCMLYFF*ASFVTLLSSGCGVC Trigger: ACAGACTCCACACCCAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCATGCAAAGATACCGGAGCCCACACCTACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGAAGCAGCAGCACTCAGAATCCCTTTCCACAGATGCACCCCAGAGGGGCCATCCTATTAGGCTaGCTTGAAGAAATACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSRSSSTQNPFPQMHPRGAILLG*LEEIPS Trigger: AGAAGGTATTTCTTCAAGCAAGCCTAATAGGATGGC...CCCTCTGGGGTGCATCTGTGGAAAGGGATTCTGAGTGCTGCTGCTTCTGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CAA 90 bp | ACTGTTCTGACCTTCCTGCCAAAACACTTAGTATCCTGGCTCAAGGAGCACTGTTGGGTGTGGAGTCTGTaGCAGCTTTCAGGTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: TVLTFLPKHLVSWLKEHCWVWSL*QLSGQT Trigger: AGTCTGACCTGAAAGCTGCAACAGACTCCACACCCA...ACAGTGCTCCTTGAGCCAGGATACTAAGTGTTTTGGCAGGAAGGTCAGAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS-3UTR CAA 90 bp | TATAGGAGCAAAGCAAGACAGGAGAACAGGAATCCACCCAATACCTGGACATATGGTGGGTTCAGGACTTaGTTGTGGGAGCGAGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: YRSKARQENRNPPNTWTYGGFRT*LWERGR Trigger: ACGACCTCGCTCCCACAACAAAGTCCTGAACCCACC...ATATGTCCAGGTATTGGGTGGATTCCTGTTCTCCTGTCTTGCTTTGCTCCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
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| CDS GCA 90 bp | GGTATCTTTGCATGCTCTACTTCTTTTGAGCTTCCTTTGTCACTCTaGTCTCCTCTGGGTGTGGAGTCTGTTGCAGCTTTCAGGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GIFACSTSFELPLSL*SPLGVESVAAFRSD Trigger: GTCTGACCTGAAAGCTGCAACAGACTCCACACCCAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCATGCAAAGATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS-3UTR CAA 90 bp | TTACGTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCGCCATCCTATTAGGCTaGCTTGAAGAAATACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRGFPGPQSLPRQLRFTSAILLG*LEEIPS Trigger: AGAAGGTATTTCTTCAAGCAAGCCTAATAGGATGGC...GGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCACGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTTTTCCCGGTCCCCAAAGCCTTCCAAGGCAGCTCAGATTCACATCCTCTTCATGCTCTACTTCTTTaGAGCTTCCTTTGTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVFPVPKAFQGSSDSHPLHALLL*SFLCHS Trigger: AGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCATG...AAGAGGATGTGAATCTGAGCTGCCTTGGAAGGCTTTGGGGACCGGGAAAACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS-3UTR CAA 90 bp | TATAGGAGCAAAGCAAGACAGGAGAACAGGAATCCACCCAATACCTGGACATATTCTTTTGAGCTTCCTTaGTCACTCTGCTCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YRSKARQENRNPPNTWTYSFELP*SLCSPL Trigger: CAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGA...ATATGTCCAGGTATTGGGTGGATTCCTGTTCTCCTGTCTTGCTTTGCTCCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCCAATTATAGGAGCAAAGCAAGACAGGAGAACAGGAATCCACCCAATAGGAGGATTTGTCCTCTaGGGTATGTTTTTAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLPIIGAKQDRRTGIHPIGGFVL*GMFLGS Trigger: AGAACCTAAAAACATACCCAAGAGGACAAATCCTCC...TATTGGGTGGATTCCTGTTCTCCTGTCTTGCTTTGCTCCTATAATTGGGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CAA 90 bp | GAATTACATACATGTAAGACCTGTTACTTGGCTTCAGGATACAGGGCATCTGAATGGTGGATTCAAACGTaGTCGAGTTTGCACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ELHTCKTCYLASGYRASEWWIQT*SSLHRS Trigger: ACTCCTGTGCAAACTCGACAACGTTTGAATCCACCA...TTCAGATGCCCTGTATCCTGAAGCCAAGTAACAGGTCTTACATGTATGTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024981.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAGTATACACCATTACCTGGGGCTATACTTCCCTCATCTTTCCAAACACATTGGTGGATTCAAACGTaGTCGAGTTTGCACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IQYTPLPGAILPSSFQTHWWIQT*SSLHRS Trigger: ACTCCTGTGCAAACTCGACAACGTTTGAATCCACCA...ATGTGTTTGGAAAGATGAGGGAAGTATAGCCCCAGGTAATGGTGTATACTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233067.2 |
||
| CDS TCA 90 bp | TTCAGTTGGTCCGAAAATATTAGATGCCATCCTATTAGGCTTGCTTaGAGAAATACCTTCTTCTGGACTTCCGAAAAGATCGCTCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: FSWSENIRCHPIRLA*RNTFFWTSEKIARF Trigger: GAATCGAGCGATCTTTTCGGAAGTCCAGAAGAAGGTATTTCTTCAAGCAAGCCTAATAGGATGGCATCTAATATTTTCGGACCAACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
||
| CDS CCA 72 bp | GATCGCTCGATTCTCCTCCCGGGGGCTTCATGGACCTaGAACCCGACTTGCCAGCTTGGCTGTCCGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DRSILLPGASWT*NPTCQLGCPRP Trigger: AGGGCGCGGACAGCCAAGCTGGCAAGTCGGGTTCCAGGTCCATGAAGCCCCCGGGAGGAGAATCGAGCGATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
||
| CDS CAA 72 bp | GAGAGGCTGGATTTGCCTCCTGGTGGGTTCAGGACTTaGTTGTGGGAGCGAGGTCGTGGCCCCAGTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: ERLDLPPGGFRT*LWERGRGPSLG Trigger: ACCCAGACTGGGGCCACGACCTCGCTCCCACAACAAAGTCCTGAACCCACCAGGAGGCAAATCCAGCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS CCA 72 bp | TGGTGGGTTCAGGACTTTGTTGTGGGAGCGAGGTCGTaGCCCCAGTCTGGGTTCATGACTGTCAACTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: WWVQDFVVGARS*PQSGFMTVNCR Trigger: CCTACAGTTGACAGTCATGAACCCAGACTGGGGCCACGACCTCGCTCCCACAACAAAGTCCTGAACCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS CAA 72 bp | GTGTGGGCTCCGGTATCTTTGCATGCTCTACTTCTTTaGAGCTTCCTTTGTCACTCTGCTCTCCTCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VWAPVSLHALLL*SFLCHSALLWV Trigger: CACCCAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCATGCAAAGATACCGGAGCCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS TCA 72 bp | TCAGACTTAGAGTCTTCACCTTCACACAGCAAAACATaGTCCTTGGGCTTGTTTGGGTGTGCCAGAGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SDLESSPSHSKT*SLGLFGCARGA Trigger: TGCGCCTCTGGCACACCCAAACAAGCCCAAGGATCATGTTTTGCTGTGTGAAGGTGAAGACTCTAAGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS TCA 72 bp | TGTGGGCTCCGGTATCTTTGCATGCTCTACTTCTTTTaGGCTTCCTTTGTCACTCTGCTCTCCTCTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: CGLRYLCMLYFF*ASFVTLLSSGC Trigger: ACACCCAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCATGCAAAGATACCGGAGCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS GCA 72 bp | GCATGCTCTACTTCTTTTGAGCTTCCTTTGTCACTCTaGTCTCCTCTGGGTGTGGAGTCTGTTGCAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ACSTSFELPLSL*SPLGVESVAAF Trigger: GAAAGCTGCAACAGACTCCACACCCAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS CCA 72 bp | CTTCTTTTGAGCTTCCTTTGTCACTCTGCTCTCCTCTaGGTGTGGAGTCTGTTGCAGCTTTCAGGTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: LLLSFLCHSALL*VWSLLQLSGQT Trigger: AGTCTGACCTGAAAGCTGCAACAGACTCCACACCCAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS CAA 72 bp | TGCACAGGAGTCGATTCATCAAAGATCCCACTTCCTTaGCCTCCTGGAGGATTTGTCCTCTTGGGTATGTTT | + |
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Preference number: 6 (lower is better) Translates to: CTGVDSSKIPLP*PPGGFVLLGMF Trigger: AAACATACCCAAGAGGACAAATCCTCCAGGAGGCAAAGGAAGTGGGATCTTTGATGAATCGACTCCTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS CAA 72 bp | GGTATCTTTGCATGCTCTACTTCTTTTGAGCTTCCTTaGTCACTCTGCTCTCCTCTGGGTGTGGAGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GIFACSTSFELP*SLCSPLGVESV Trigger: AACAGACTCCACACCCAGAGGAGAGCAGAGTGACAAAGGAAGCTCAAAAGAAGTAGAGCATGCAAAGATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS CAA 90 bp | TGTCGAGTTTGCACAGGAGTCGATTCATCAAAGATCCCACTTCCTTaGCCTCCTGGAGGATTTGTCCTCTTGGGTATGTTTTTAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: CRVCTGVDSSKIPLP*PPGGFVLLGMFLGS Trigger: AGAACCTAAAAACATACCCAAGAGGACAAATCCTCCAGGAGGCAAAGGAAGTGGGATCTTTGATGAATCGACTCCTGTGCAAACTCGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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| CDS TCA 72 bp | TCCGAAAATATTAGATGCCATCCTATTAGGCTTGCTTaGAGAAATACCTTCTTCTGGACTTCCGAAAAGATC | + |
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Preference number: 6 (lower is better) Translates to: SENIRCHPIRLA*RNTFFWTSEKI Trigger: GATCTTTTCGGAAGTCCAGAAGAAGGTATTTCTTCAAGCAAGCCTAATAGGATGGCATCTAATATTTTCGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024981.9 ENSMUST00000233067.2 |
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