Pregenerated sensors for JPH4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022208Ensembl transcript IDs: ENSMUST00000022819.13, ENSMUST00000124493.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGCCCTTCAGCCCTCAACGTGTTCGCCCCACAACTGTCAGAGCTaGGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: AALQPSTCSPHNCQS*GLGSSLAAAPLTLC Trigger: GCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAGCTCTGACAGTTGTGGGGCGAACACGTTGAGGGCTGAAGGGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR TCA 90 bp | TCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGAGGGACTGGTTaGGGAGGGCAGGAGAGGGAGCACGGGGAGTTTCCTGTTGTTCGC | + |
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Preference number: 1 (lower is better) Translates to: SWLGVPSLVVGRGTG*GGQEREHGEFPVVR Trigger: GCGAACAACAGGAAACTCCCCGTGCTCCCTCTCCTGCCCTCCTCAACCAGTCCCTCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR GCA 90 bp | AGGCCATTCCTTGAGGAAGGGATTGATTGGCAGGCAGCTTGCCTCTaGCTCATGCAGGGTAGGAAAGTCCCCCGGGGTTCCACAGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: RPFLEEGIDWQAACL*LMQGRKVPRGSTVP Trigger: GGGGACTGTGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCCAATCAATCCCTTCCTCAAGGAATGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR GCA 90 bp | TGGGCAAGGCCATTCCTTGAGGAAGGGATTGATTGGCAGGCAGCTTaGCTCTGCCTCATGCAGGGTAGGAAAGTCCCCCGGGGTTCCACA | + |
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Preference number: 1 (lower is better) Translates to: WARPFLEEGIDWQAA*LCLMQGRKVPRGST Trigger: TGTGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCCAATCAATCCCTTCCTCAAGGAATGGCCTTGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR CCA 90 bp | GGTGGGCATTCCTGGGCAAGGCCATTCCTTGAGGAAGGGATTGATTaGCAGGCAGCTTGCCTCTGCCTCATGCAGGGTAGGAAAGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: GGHSWARPFLEEGID*QAACLCLMQGRKVP Trigger: GGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCCAATCAATCCCTTCCTCAAGGAATGGCCTTGCCCAGGAATGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR GCA 90 bp | GTGTTCGCCCCACAACTGTCAGAGCTGAGGACTGGGGTCCTCGCTTaGTGCAGCGCCTCTAACCCTCTGCAGAAATGTCTTCTTCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: VFAPQLSELRTGVLA*CSASNPLQKCLLQS Trigger: GGACTGAAGAAGACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAGCTCTGACAGTTGTGGGGCGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR CCA 90 bp | TTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTaGTTGGGAGAGGGACTGGTTGAGGAGGGCAGGAGAGGGAGCACG | + |
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Preference number: 1 (lower is better) Translates to: FVAFLNTLGLACHPW*LGEGLVEEGRRGST Trigger: CGTGCTCCCTCTCCTGCCCTCCTCAACCAGTCCCTCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR GCA 90 bp | AAGTGGCTCAGGCAGTGCCTTGTCTGGCCACCCAATCACTTCTTATaGATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: KWLRQCLVWPPNHFL*ISFLPSTQIPGDSS Trigger: TGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCATAAGAAGTGATTGGGTGGCCAGACAAGGCACTGCCTGAGCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTTTCCCTTGGGGCCAGTaGGCCCCAAGTGGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: CGAAASSDSPLAPISQESFPWGQ*APSGSG Trigger: GCCTGAGCCACTTGGGGCTCACTGGCCCCAAGGGAA...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTGGTCGAAGGTCAGAGTaGGTGCAGAGGCAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LRTGVLACCSASNPLQKCGRRSE*VQRQAA Trigger: GGCTGCCTGCCTCTGCACCCACTCTGACCTTCGACC...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTGTCAGAGCTGAGGACTaGGGTCCTCGCTTGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: CGAAASSDSPLAPISQESVRAED*GPRLLQ Trigger: CTGCAGCAAGCGAGGACCCCAGTCCTCAGCTCTGAC...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTGTGAGTGGCAGAATCTaGAGAGGGGCGGGCTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LRTGVLACCSASNPLQKCVSGRI*RGAGLV Trigger: AACCAAGCCCGCCCCTCTTCAGATTCTGCCACTCAC...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTGGAGGGTACTTTTCCTaGAGCTTTCCCTTGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CGAAASSDSPLAPISQESGGYFS*SFPLGP Trigger: TGGCCCCAAGGGAAAGCTGCAGGAAAAGTACCCTCC...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTTTCCCTTGGGGCCAGTaGGCCCCAAGTGGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: RSLREGLETRLVTASAALFPWGQ*APSGSG Trigger: GCCTGAGCCACTTGGGGCTCACTGGCCCCAAGGGAA...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGCAGCTTGCCTCTGCCTCATGCAGGGTAGGAAAGTCCCCCGGGGTTCCAATCAAAGGCCACAAGTaGGTCCAGACCAACCAAATA | + |
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Preference number: 2 (lower is better) Translates to: GRQLASASCRVGKSPGVPIKGHK*VQTNQI Trigger: TATTTGGTTGGTCTGGACTCACTTGTGGCCTTTGAT...TGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGAAGGGGCGGGCTTGGTTaGACCAGATGGTTTTTCGTT | + |
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Preference number: 2 (lower is better) Translates to: SSDSPLAPISQESTRGVRRGGLG*TRWFFV Trigger: AACGAAAAACCATCTGGTGCAACCAAGCCCGCCCCT...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTGTGAGTGGCAGAATCTaGAGAGGGGCGGGCTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: RSLREGLETRLVTASAALVSGRI*RGAGLV Trigger: AACCAAGCCCGCCCCTCTTCAGATTCTGCCACTCAC...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGAAGAAGGGTAGAGAGGTaGGTGGCAGAATCTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SSDSPLAPISQESTRGVRRRVER*VAESEE Trigger: CTCTTCAGATTCTGCCACTCACCTCTCTACCCTTCT...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCACCCACCTCTGCCCTaGCCTGTGTGGGGCAGCGGC | + |
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Preference number: 2 (lower is better) Translates to: FLQDLMLAALLYNFNPKFHPPLP*PVWGSG Trigger: GCCGCTGCCCCACACAGGGCAGGGCAGAGGTGGGTG...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR-3UTR CCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGGTCGAAGGTCAGAGTaGGTGCAGAGGCAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: FSLLFSILLAWRAILGGWGRRSE*VQRQAA Trigger: GGCTGCCTGCCTCTGCACCCACTCTGACCTTCGACC...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTATCAAAGGCCACAAGTaGGTCCAGACCAACCAAATA | + |
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Preference number: 2 (lower is better) Translates to: LRTGVLACCSASNPLQKCIKGHK*VQTNQI Trigger: TATTTGGTTGGTCTGGACTCACTTGTGGCCTTTGAT...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCAGAAGGTCAGAGTGGGTaGAGAGGCAGGCAGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPEGQSG*RGRQPE Trigger: TTCTGGCTGCCTGCCTCTGCACCCACTCTGACCTTC...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGAGCGCCTCTAACCCTCTaGAGAAATGTCTTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SSDSPLAPISQESTRGVRAPLTL*RNVFFS Trigger: ACTGAAGAAGACATTTCTGCAGAGGGTTAGAGGCGC...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGACCCAATCACTTCTTATaGATTTCCTTTCTCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SSDSPLAPISQESTRGVRPNHFL*ISFLPS Trigger: GGAGGGGAGAAAGGAAATGCATAAGAAGTGATTGGG...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCAAGGAGAGAGCAACTCTaGGAGAGAACAGCCCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPRREQL*ERTALH Trigger: ATGAAGGGCTGTTCTCTCTCAGAGTTGCTCTCTCCT...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTCAGATGGTTTTTCGTTaGTTTTCTCAATACTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRTGVLACCSASNPLQKCQMVFR*FSQYSW Trigger: CCAAGAGTATTGAGAAAAGCAACGAAAAACCATCTG...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCGAAGGTCAGAGTGGGTaGAGAGGCAGGCAGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FLQDLMLAALLYNFNPKFEGQSG*RGRQPE Trigger: TTCTGGCTGCCTGCCTCTGCACCCACTCTGACCTTC...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTCCCTTGGTGAAGTTTTaGTTCAAAGAAAAGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RSLREGLETRLVTASAALPLVKF*FKEKVG Trigger: CCCAACCTTTTCTTTGAATCAAAACTTCACCAAGGG...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGAAACCCCCACCCTTGGTaGAGTTTTGATTCAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRNPHPW*SFDSKK Trigger: TTTCTTTGAATCAAAACTTCACCAAGGGTGGGGGTT...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGAACTTAGGTAGGTTCTGGGAGGTAAGAGTGGAGGGTACTTTTCCTGCACCCAATCACTTCTTATaGATTTCCTTTCTCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GKNLGRFWEVRVEGTFPAPNHFL*ISFLPS Trigger: GGAGGGGAGAAAGGAAATGCATAAGAAGTGATTGGG...TGCAGGAAAAGTACCCTCCACTCTTACCTCCCAGAACCTACCTAAGTTCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCAGGCAGCTTGCCTCTaGCTCATGCAGGGTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FLQDLMLAALLYNFNPKFQAACL*LMQGRK Trigger: TTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTG...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR-3UTR TCA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCAAACCCCCACCCTTGGTaGAGTTTTGATTCAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPNPHPW*SFDSKK Trigger: TTTCTTTGAATCAAAACTTCACCAAGGGTGGGGGTT...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCCCTTGGTGAAGTTTTaGTTCAAAGAAAAGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: FLQDLMLAALLYNFNPKFPLVKF*FKEKVG Trigger: CCCAACCTTTTCTTTGAATCAAAACTTCACCAAGGG...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR CCA 72 bp | TCCTGCAGCTTTCCCTTGGGGCCAGTGAGCCCCAAGTaGCTCAGGCAGTGCCTTGTCTGGCCACCCAATCAC | + |
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Preference number: 3 (lower is better) Translates to: SCSFPLGPVSPK*LRQCLVWPPNH Trigger: GTGATTGGGTGGCCAGACAAGGCACTGCCTGAGCCACTTGGGGCTCACTGGCCCCAAGGGAAAGCTGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTTGCCATCCTTGGTGGTaGGGAGAGGGACTGGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: CGAAASSDSPLAPISQESCHPWW*GEGLVE Trigger: CTCAACCAGTCCCTCTCCCAACCACCAAGGATGGCA...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR GCA 72 bp | AAGGGATTGATTGGCAGGCAGCTTGCCTCTGCCTCATaGAGGGTAGGAAAGTCCCCCGGGGTTCCACAGTCC | + |
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Preference number: 3 (lower is better) Translates to: KGLIGRQLASAS*RVGKSPGVPQS Trigger: GGACTGTGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCCAATCAATCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR CCA 72 bp | TCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTaGGAGAGGGACTGGTTGAGGAGGGCAGGAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SILLAWRAILGG*ERDWLRRAGEG Trigger: TCCCTCTCCTGCCCTCCTCAACCAGTCCCTCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR GCA 72 bp | CCACAACTGTCAGAGCTGAGGACTGGGGTCCTCGCTTaGTGCAGCGCCTCTAACCCTCTGCAGAAATGTCTT | + |
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Preference number: 3 (lower is better) Translates to: PQLSELRTGVLA*CSASNPLQKCL Trigger: AAGACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAGCTCTGACAGTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGCAGCTTGCCTCTGCCTCATGCAGGGTAGGAAAGTCCCCCGGGGTTCCATGGTCTGACTTAGATTaGTGTATCTCAGAGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GRQLASASCRVGKSPGVPWSDLD*CISEER Trigger: TCTCTCCTCTGAGATACACAAATCTAAGTCAGACCA...TGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR GCA 72 bp | CAACTGTCAGAGCTGAGGACTGGGGTCCTCGCTTGCTaGAGCGCCTCTAACCCTCTGCAGAAATGTCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QLSELRTGVLAC*SASNPLQKCLL Trigger: AAGAAGACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAGCTCTGACAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR CCA 72 bp | TTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTaGTTGGGAGAGGGACTGGTTGAGGAGGGCAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: FLNTLGLACHPW*LGEGLVEEGRR Trigger: TCTCCTGCCCTCCTCAACCAGTCCCTCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR CAA 90 bp | GGCAAGAACTTAGGTAGGTTCTGGGAGGTAAGAGTGGAGGGTACTTTTCCTGCAGGCTCAGGCAGTGCCTaGTCTGGCCACCCAATCACT | + |
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Preference number: 3 (lower is better) Translates to: GKNLGRFWEVRVEGTFPAGSGSA*SGHPIT Trigger: AGTGATTGGGTGGCCAGACAAGGCACTGCCTGAGCC...TGCAGGAAAAGTACCCTCCACTCTTACCTCCCAGAACCTACCTAAGTTCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR GCA 72 bp | CTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTaGAGAAATGTCTTCTTCAGTCCCCTTAGGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: LGSSLAAAPLTL*RNVFFSPLRNL Trigger: TAAATTCCTAAGGGGACTGAAGAAGACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCAACTCTCGTCCGGGGTaGACACCCACCTCTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: FLQDLMLAALLYNFNPKFNSRPG*TPTSAL Trigger: CAGGGCAGAGGTGGGTGTCAACCCCGGACGAGAGTT...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| 3UTR CCA 72 bp | GGGAAGATCAAAGTAGGCAAGAACTTAGGTAGGTTCTaGGAGGTAAGAGTGGAGGGTACTTTTCCTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GKIKVGKNLGRF*EVRVEGTFPAA Trigger: AGCTGCAGGAAAAGTACCCTCCACTCTTACCTCCCAGAACCTACCTAAGTTCTTGCCTACTTTGATCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCAGCTTGCCTCTGCCTCATGCAGGGTAGGAAAGTCCCCCGGGGTTCCACAGCCCGGAGCCCGCTaGGCAGCAGTGAACGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRQLASASCRVGKSPGVPQPGAR*AAVNGG Trigger: TCCGCCGTTCACTGCTGCTCAGCGGGCTCCGGGCTG...TGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCAGCTTGCCTCTGCCTCATGCAGGGTAGGAAAGTCCCCCGGGGTTCCAAGCGACTCGAAGCCGTaGGCCCAGCAGCCGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GRQLASASCRVGKSPGVPSDSKP*AQQPLY Trigger: GTACAGCGGCTGCTGGGCTCACGGCTTCGAGTCGCT...TGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR GCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTGGGCGCCGGGCCCGGTaGACACGCCGTAGCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRTGVLACCSASNPLQKCGRRAR*TRRSHV Trigger: CACATGGCTACGGCGTGTGCACCGGGCCCGGCGCCC...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGCAGCTTTCCCTTGGGGCCAGTGAGCCCCAAGTGGCTCAGGCAGTGCCTTGGGAGGAGGCGGGGCTaGTGGGTAGTTCCGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCSFPLGPVSPKWLRQCLGRRRG*WVVPES Trigger: GCTCTCCGGAACTACCCAGCAGCCCCGCCTCCTCCC...AAGGCACTGCCTGAGCCACTTGGGGCTCACTGGCCCCAAGGGAAAGCTGCAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGACCGCTGTACTCTCCCTaGGCGCCGGGCCCGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSDSPLAPISQESTRGVRPLYSP*APGPVH Trigger: GTGCACCGGGCCCGGCGCCCAGGGAGAGTACAGCGG...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTAGCCATCGGGCCGGGTaGTGCGCCCGTATCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGVLACCSASNPLQKCSHRAG*CARIRG Trigger: GCCACGGATACGGGCGCACCACCCGGCCCGATGGCT...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTCTCCTGAGTCCTGTCTaGGTCTGCGGCCTGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGAAASSDSPLAPISQESLLSPV*VCGLGP Trigger: AGGCCCCAGGCCGCAGACCCAGACAGGACTCAGGAG...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCAGCTTGCCTCTGCCTCATGCAGGGTAGGAAAGTCCCCCGGGGTTCCACCTGGGGCCCTCAGTTaGGGCAAGGACTCTTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRQLASASCRVGKSPGVPPGALS*GKDSSS Trigger: AGACGAAGAGTCCTTGCCCCAACTGAGGGCCCCAGG...TGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTGGGCAGGCCTCTCGGTaGGAGCAGGCTCCTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: CGAAASSDSPLAPISQESGQASR*EQAPQP Trigger: AGGTTGAGGAGCCTGCTCCCACCGAGAGGCCTGCCC...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTGGAGGTGCGGCGGGGTaGGCGCAGAAGCGCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSLREGLETRLVTASAALGGAAG*AQKRRL Trigger: CAGGCGGCGCTTCTGCGCTCACCCCGCCGCACCTCC...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGAGAGATCCCCTCTTGCTaGCCAGGGAGCTGCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSDSPLAPISQESTRGVREIPSC*PGSCGA Trigger: GGCGCCGCAGCTCCCTGGGCAGCAAGAGGGGATCTC...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTCCAGAGGCAGGAGGCTaGGGACACGTCCCCCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRTGVLACCSASNPLQKCPEAGG*GHVPRV Trigger: TACACGGGGGACGTGTCCGCAGCCTCCTGCCTCTGG...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCAGCTTTCCCTTGGGGCCAGTGAGCCCCAAGTGGCTCAGGCAGTGCCTTTGGGGAACCATCTCTTaGTCCTGGACCCTGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSFPLGPVSPKWLRQCLWGTIS*SWTLHP Trigger: GGGGTGCAGGGTCCAGGACCAAGAGATGGTTCCCCA...AAGGCACTGCCTGAGCCACTTGGGGCTCACTGGCCCCAAGGGAAAGCTGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTCCCGCTGAGCAGCAGTaGACGGCGGAAGAATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGVLACCSASNPLQKCPAEQQ*TAEEST Trigger: GGTGGATTCTTCCGCCGTTCACTGCTGCTCAGCGGG...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTAGCCGGAGGCTGGGCTaGCTCCTTCATCTCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CGAAASSDSPLAPISQESSRRLG*LLHLLV Trigger: TACCAGGAGATGAAGGAGGCAGCCCAGCCTCCGGCT...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTAGTCCTGTCTGGGTCTaGGGCCTGGGGCCTCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: CGAAASSDSPLAPISQESSPVWV*GLGPLT Trigger: TGTTAGAGGCCCCAGGCCGCAGACCCAGACAGGACT...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGAGTCCGCCGGGCCCCGTaGAGACACCCAGCGACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRVRRAP*RHPATR Trigger: TCGAGTCGCTGGGTGTCTTCACGGGGCCCGGCGGAC...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGACCCGCTGAGCAGCAGTaGACGGCGGAAGAATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSDSPLAPISQESTRGVRPAEQQ*TAEEST Trigger: GGTGGATTCTTCCGCCGTTCACTGCTGCTCAGCGGG...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGAGTACACCTCAGTGGCTaGGCCCTCGATGAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSDSPLAPISQESTRGVRVHLSG*ALDEGR Trigger: CCTGCCCTCATCGAGGGCTCAGCCACTGAGGTGTAC...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCCACGCCGTAGCCATGTaGCCGCCCCGCCTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YAFPFSPPLRFQEIPQDTHAVAM*PPRLPA Trigger: GGCTGGGAGGCGGGGCGGGCACATGGCTACGGCGTG...GGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCACACGCCGTAGCCATGTaGCCGCCCCGCCTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPHAVAM*PPRLPA Trigger: GGCTGGGAGGCGGGGCGGGCACATGGCTACGGCGTG...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCGGGCGCCGGGCCCGGTaGACACGCCGTAGCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: YAFPFSPPLRFQEIPQDTGRRAR*TRRSHV Trigger: CACATGGCTACGGCGTGTGCACCGGGCCCGGCGCCC...GGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCCCGCTGTACTCTCCCTaGGCGCCGGGCCCGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YAFPFSPPLRFQEIPQDTPLYSP*APGPVH Trigger: GTGCACCGGGCCCGGCGCCCAGGGAGAGTACAGCGG...GGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTCCTGGGGCCCTCAGTTaGGGCAAGGACTCTTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTGVLACCSASNPLQKCPGALS*GKDSSS Trigger: AGACGAAGAGTCCTTGCCCCAACTGAGGGCCCCAGG...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTCCACCACCAGGGGGTTaGCAGCTCCCGGCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSLREGLETRLVTASAALPPPGG*QLPAGQ Trigger: CTGCCCAGCCGGGAGCTGCCAACCCCCTGGTGGTGG...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | TATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCCAGCCCGGAGCCCGCTaGGCAGCAGTGAACGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YAFPFSPPLRFQEIPQDTQPGAR*AAVNGG Trigger: TCCGCCGTTCACTGCTGCTCAGCGGGCTCCGGGCTG...GGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTCTCTCGAAGACTTCCTaGACTGTCACTGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CGAAASSDSPLAPISQESLSKTS*TVTAAS Trigger: GGAGGCTGCAGTGACAGTTCAGGAAGTCTTCGAGAG...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTGAGATCCCCTCTTGCTaGCCAGGGAGCTGCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLREGLETRLVTASAALEIPSC*PGSCGA Trigger: GGCGCCGCAGCTCCCTGGGCAGCAAGAGGGGATCTC...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGAAGTCCTGTCTGGGTCTaGGGCCTGGGGCCTCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSDSPLAPISQESTRGVRSPVWV*GLGPLT Trigger: TGTTAGAGGCCCCAGGCCGCAGACCCAGACAGGACT...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGAGCTCGCCAAGGTTGGTaGGAGGAGGCGGGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRARQGW*EEAGLL Trigger: CAGCAGCCCCGCCTCCTCCCACCAACCTTGGCGAGC...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGATTGGCAGCTCCCGGCTaGGCAGGCCTCTCGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRLAAPG*AGLSVG Trigger: TCCCACCGAGAGGCCTGCCCAGCCGGGAGCTGCCAA...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTCTCTCGAAGACTTCCTaGACTGTCACTGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGVLACCSASNPLQKCLSKTS*TVTAAS Trigger: GGAGGCTGCAGTGACAGTTCAGGAAGTCTTCGAGAG...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCACCAGCCCTTCGCGCTTaGCCTGCTGCCAGTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPPALRA*PAASGP Trigger: AGGGCCACTGGCAGCAGGGCAAGCGCGAAGGGCTGG...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCTCTCCCATACGCCGCTaGGCCCCTTCAGCCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWERKTRKTRDGSRINETSPIRR*APSARP Trigger: TGGGCGGGCTGAAGGGGCGCAGCGGCGTATGGGAGA...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTCCAGAGGCAGGAGGCTaGGGACACGTCCCCCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSLREGLETRLVTASAALPEAGG*GHVPRV Trigger: TACACGGGGGACGTGTCCGCAGCCTCCTGCCTCTGG...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTTTCCTGAACTGTCACTaGAGCCTCCGAGAAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTGVLACCSASNPLQKCFLNCH*SLREVG Trigger: CCCCACTTCTCGGAGGCTGCAGTGACAGTTCAGGAA...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTTCGGGAGCCGGAGGCTaGGCTGCCTCCTTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLREGLETRLVTASAALSGAGG*AASFIS Trigger: GGAGATGAAGGAGGCAGCCCAGCCTCCGGCTCCCGA...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGAGCAGCCGCAATTTCCTaGCGCTGGCGGGCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRAAAIS*RWRAAL Trigger: GAGTGCTGCCCGCCAGCGCCAGGAAATTGCGGCTGC...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTACGCGAGGGGTTAGATCTCCGCGACGCTGCTaGCTGCCACTGCTTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSDSPLAPISQESTRGVRSPRRC*LPLLLG Trigger: TCCTAAAAGCAGTGGCAGCCAGCAGCGTCGCGGAGA...TCTAACCCCTCGCGTAGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCGCTCGCCAAGGTTGGTaGGAGGAGGCGGGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWERKTRKTRDGSRINETARQGW*EEAGLL Trigger: CAGCAGCCCCGCCTCCTCCCACCAACCTTGGCGAGC...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCATTGGCAGCTCCCGGCTaGGCAGGCCTCTCGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPLAAPG*AGLSVG Trigger: TCCCACCGAGAGGCCTGCCCAGCCGGGAGCTGCCAA...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAGAACTTAGGTAGGTTCTGGGAGGTAAGAGTGGAGGGTACTTTTCCTGCAAGCGACTCGAAGCCGTaGGCCCAGCAGCCGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKNLGRFWEVRVEGTFPASDSKP*AQQPLY Trigger: GTACAGCGGCTGCTGGGCTCACGGCTTCGAGTCGCT...TGCAGGAAAAGTACCCTCCACTCTTACCTCCCAGAACCTACCTAAGTTCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCAGGTCCAGCGGCTCTTaGGCTCCACGCCCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GWERKTRKTRDGSRINETRSSGS*APRPAL Trigger: AAGGGCTGGGCGTGGAGCGCAAGAGCCGCTGGACCT...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGTCTCCCATACGCCGCTaGGCCCCTTCAGCCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWSPIRR*APSARP Trigger: TGGGCGGGCTGAAGGGGCGCAGCGGCGTATGGGAGA...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGAGTAGAGATCCCCTCTTaGTGCCCAGGGAGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRVEIPS*CPGSCG Trigger: GCCGCAGCTCCCTGGGCAGCAAGAGGGGATCTCTAC...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTCCGGGGGTCCTGTACTaGCCACTTCGCTGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLREGLETRLVTASAALPGVLY*PLRCSP Trigger: AGGTGAGCAGCGAAGTGGGCAGTACAGGACCCCCGG...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGTGCGCCCGTATCCGTaGCGTCGGTTGCCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWVRPYP*RRLPSH Trigger: GTGGCTGGGCAACCGACGCCACGGATACGGGCGCAC...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCGCAGCCGCAATTTCCTaGCGCTGGCGGGCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: YAFPFSPPLRFQEIPQDTAAAIS*RWRAAL Trigger: GAGTGCTGCCCGCCAGCGCCAGGAAATTGCGGCTGC...GGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCGGGCGTCTGCTGCCCTaGCAGCCGCAATTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWERKTRKTRDGSRINETGRLLP*QPQFPG Trigger: GCCAGGAAATTGCGGCTGCCAGGGCAGCAGACGCCC...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGACCTGGGCTATCAGCTTaGCCATCCGCGCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRPGLSA*PSAQPP Trigger: TGGAGGCTGCGCGGATGGCCAAGCTGATAGCCCAGG...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAGAACTTAGGTAGGTTCTGGGAGGTAAGAGTGGAGGGTACTTTTCCTGCACTCCTGAGTCCTGTCTaGGTCTGCGGCCTGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKNLGRFWEVRVEGTFPALLSPV*VCGLGP Trigger: AGGCCCCAGGCCGCAGACCCAGACAGGACTCAGGAG...TGCAGGAAAAGTACCCTCCACTCTTACCTCCCAGAACCTACCTAAGTTCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAGAACTTAGGTAGGTTCTGGGAGGTAAGAGTGGAGGGTACTTTTCCTGCAGTACACCTCAGTGGCTaGGCCCTCGATGAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKNLGRFWEVRVEGTFPAVHLSG*ALDEGR Trigger: CCTGCCCTCATCGAGGGCTCAGCCACTGAGGTGTAC...TGCAGGAAAAGTACCCTCCACTCTTACCTCCCAGAACCTACCTAAGTTCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGAGGTCCAGCGGCTCTTaGGCTCCACGCCCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWRSSGS*APRPAL Trigger: AAGGGCTGGGCGTGGAGCGCAAGAGCCGCTGGACCT...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGAAGCCGGAGGCTGGGCTaGCTCCTTCATCTCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRSRRLG*LLHLLV Trigger: TACCAGGAGATGAAGGAGGCAGCCCAGCCTCCGGCT...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCGTAGAGATCCCCTCTTaGTGCCCAGGGAGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: YAFPFSPPLRFQEIPQDTVEIPS*CPGSCG Trigger: GCCGCAGCTCCCTGGGCAGCAAGAGGGGATCTCTAC...GGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGTCGGGAGCCGGAGGCTaGGCTGCCTCCTTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWSGAGG*AASFIS Trigger: GGAGATGAAGGAGGCAGCCCAGCCTCCGGCTCCCGA...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGGGCGTCTGCTGCCCTaGCAGCCGCAATTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWGRLLP*QPQFPG Trigger: GCCAGGAAATTGCGGCTGCCAGGGCAGCAGACGCCC...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGGGCAGGCCTCTCGGTaGGAGCAGGCTCCTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWGQASR*EQAPQP Trigger: AGGTTGAGGAGCCTGCTCCCACCGAGAGGCCTGCCC...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCGTCCGCCGGGCCCCGTaGAGACACCCAGCGACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLQDLMLAALLYNFNPKFVRRAP*RHPATR Trigger: TCGAGTCGCTGGGTGTCTTCACGGGGCCCGGCGGAC...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTTGTGTCAGAACCTCCTaGGTCCTGTCTGGGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSLREGLETRLVTASAALCVRTS*VLSGSA Trigger: CGCAGACCCAGACAGGACTCAGGAGGTTCTGACACA...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTCCTTCTCCGCGACGCTaGTGGCTGCCACTGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RSLREGLETRLVTASAALPSPRR*WLPLLL Trigger: TAAAAGCAGTGGCAGCCAGCAGCGTCGCGGAGAAGG...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCAGCCATCGGGCCGGGTaGTGCGCCCGTATCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLQDLMLAALLYNFNPKFSHRAG*CARIRG Trigger: GCCACGGATACGGGCGCACCACCCGGCCCGATGGCT...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR CCA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCAGCAATTTCCTGGCGCTaGCGGGCAGCACTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPAISWR*RAALTA Trigger: AGCTGTGAGTGCTGCCCGCCAGCGCCAGGAAATTGC...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCGCAATTTCCTGGCGCTaGCGGGCAGCACTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWERKTRKTRDGSRINETAISWR*RAALTA Trigger: AGCTGTGAGTGCTGCCCGCCAGCGCCAGGAAATTGC...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | CGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGGAGATCTCCGCGACGCTGCTaGCTGCCACTGCTTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCFSQYSWLGVPSLVVGRSPRRC*LPLLLG Trigger: TCCTAAAAGCAGTGGCAGCCAGCAGCGTCGCGGAGA...TCTCCCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGCCTGGGCTATCAGCTTaGCCATCCGCGCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWPGLSA*PSAQPP Trigger: TGGAGGCTGCGCGGATGGCCAAGCTGATAGCCCAGG...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAGAACTTAGGTAGGTTCTGGGAGGTAAGAGTGGAGGGTACTTTTCCTGCAACCATCTCTTGGTCCTaGACCCTGCACCCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKNLGRFWEVRVEGTFPATISWS*TLHPSL Trigger: GAGGCTGGGGTGCAGGGTCCAGGACCAAGAGATGGT...TGCAGGAAAAGTACCCTCCACTCTTACCTCCCAGAACCTACCTAAGTTCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAGAACTTAGGTAGGTTCTGGGAGGTAAGAGTGGAGGGTACTTTTCCTGCACCTTCTCCGCGACGCTaGTGGCTGCCACTGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GKNLGRFWEVRVEGTFPAPSPRR*WLPLLL Trigger: TAAAAGCAGTGGCAGCCAGCAGCGTCGCGGAGAAGG...TGCAGGAAAAGTACCCTCCACTCTTACCTCCCAGAACCTACCTAAGTTCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGTGGGGAACCATCTCTTaGTCCTGGACCCTGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWWGTIS*SWTLHP Trigger: GGGGTGCAGGGTCCAGGACCAAGAGATGGTTCCCCA...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCAGCAGCCTCCGAGAAGTaGGGAACCATCTCTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPAASEK*GTISWS Trigger: GGACCAAGAGATGGTTCCCCACTTCTCGGAGGCTGC...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | CAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCATGAACCACCACCAGGGGGTTaGCAGCTCCCGGCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDLMLAALLYNFNPKFHEPPPGG*QLPAGQ Trigger: CTGCCCAGCCGGGAGCTGCCAACCCCCTGGTGGTGG...TTCATGGAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCGGTTACGCTTGTACTTaGCCTCCTCACGGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GWERKTRKTRDGSRINETGYACT*PPHGSH Trigger: ATGGCTCCCGTGAGGAGGGCAAGTACAAGCGTAACC...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | TATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCGGTTACGCTTGTACTTaGCCTCCTCACGGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YAFPFSPPLRFQEIPQDTGYACT*PPHGSH Trigger: ATGGCTCCCGTGAGGAGGGCAAGTACAAGCGTAACC...GGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | CAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCATGAAGGGAGGAGGCGGGGCTaGTGGGTAGTTCCGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDLMLAALLYNFNPKFHEGRRRG*WVVPES Trigger: GCTCTCCGGAACTACCCAGCAGCCCCGCCTCCTCCC...TTCATGGAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR GCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGTTCCTGAACTGTCACTaGAGCCTCCGAGAAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWFLNCH*SLREVG Trigger: CCCCACTTCTCGGAGGCTGCAGTGACAGTTCAGGAA...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCCTGGGGCCTCTAACATaGGTTGTAGATCCTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GWERKTRKTRDGSRINETLGPLT*VVDPGL Trigger: TAGCCCAGGATCTACAACCCATGTTAGAGGCCCCAG...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR GCA 90 bp | CAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCATGAACCGGGGGTCCTGTACTaGCCACTTCGCTGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QDLMLAALLYNFNPKFHEPGVLY*PLRCSP Trigger: AGGTGAGCAGCGAAGTGGGCAGTACAGGACCCCCGG...TTCATGGAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR CCA 90 bp | TTTTCGTTGCTTTTCTCAATACTCTTGGCTTGGCGTGCCATCCTTGGTGGTTGGCTGGGGCCTCTAACATaGGTTGTAGATCCTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSLLFSILLAWRAILGGWLGPLT*VVDPGL Trigger: TAGCCCAGGATCTACAACCCATGTTAGAGGCCCCAG...CCAACCACCAAGGATGGCACGCCAAGCCAAGAGTATTGAGAAAAGCAACGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCTGTGTCAGAACCTCCTaGGTCCTGTCTGGGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLQDLMLAALLYNFNPKFCVRTS*VLSGSA Trigger: CGCAGACCCAGACAGGACTCAGGAGGTTCTGACACA...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR CCA 90 bp | CAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCATGAAACCATCTCTTGGTCCTaGACCCTGCACCCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QDLMLAALLYNFNPKFHETISWS*TLHPSL Trigger: GAGGCTGGGGTGCAGGGTCCAGGACCAAGAGATGGT...TTCATGGAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCGCAGCCTCCGAGAAGTaGGGAACCATCTCTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLQDLMLAALLYNFNPKFAASEK*GTISWS Trigger: GGACCAAGAGATGGTTCCCCACTTCTCGGAGGCTGC...GAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTGCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS-3UTR CCA 90 bp | CAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCATGAACGTAGCGCAGCCCGTTaGATCTCTGGCTCACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDLMLAALLYNFNPKFHERSAAR*ISGSLH Trigger: ATGGAGTGAGCCAGAGATCCAACGGGCTGCGCTACG...TTCATGGAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
||
| CDS GCA 90 bp | AGAGCCCGGCGTAGCGCAGGCCGGACACGCTCTCCCATACGCCGCTaGGCCCCTTCAGCCCGCCCAGCCACTCGCCGCGGTAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RARRSAGRTRSPIRR*APSARPATRRGRSS Trigger: GCTGGACCTACCGCGGCGAGTGGCTGGGCGGGCTGAAGGGGCGCAGCGGCGTATGGGAGAGCGTGTCCGGCCTGCGCTACGCCGGGCTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS GCA 90 bp | GGTAGGTCCAGCGGCTCTTGCGCTCCACGCCCAGCCCTTCGCGCTTaGCCTGCTGCCAGTGGCCCTGGTAACTGTGTCCGCCGGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRSSGSCAPRPALRA*PAASGPGNCVRRAP Trigger: CGGGGCCCGGCGGACACAGTTACCAGGGCCACTGGCAGCAGGGCAAGCGCGAAGGGCTGGGCGTGGAGCGCAAGAGCCGCTGGACCTACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS TCA 90 bp | CCGCACGCCACTCACCGGCGTACACCTCAGTGGCTGAGCCCTCGATaGGGGCAGGTGGAGCTGGGATTGGGGGCCCGCTGGCCTCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PHATHRRTPQWLSPR*GQVELGLGARWPRS Trigger: GCTCCGAGGCCAGCGGGCCCCCAATCCCAGCTCCACCTGCCCTCATCGAGGGCTCAGCCACTGAGGTGTACGCCGGTGAGTGGCGTGCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS TCA 90 bp | CAGGGAGCTGCGGCGCCCACCAGCCCGGAGCCCGCTGAGCAGCAGTaGACGGCGGAAGAATCCACCTGCTGCTGGGGTGCGCTTACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGAAAPTSPEPAEQQ*TAEESTCCWGALTG Trigger: TCCCGTAAGCGCACCCCAGCAGCAGGTGGATTCTTCCGCCGTTCACTGCTGCTCAGCGGGCTCCGGGCTGGTGGGCGCCGCAGCTCCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
||
| CDS TCA 90 bp | TCTTGCTGCCCAGGGAGCTGCGGCGCCCACCAGCCCGGAGCCCGCTaGGCAGCAGTGAACGGCGGAAGAATCCACCTGCTGCTGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCCPGSCGAHQPGAR*AAVNGGRIHLLLGC Trigger: GCACCCCAGCAGCAGGTGGATTCTTCCGCCGTTCACTGCTGCTCAGCGGGCTCCGGGCTGGTGGGCGCCGCAGCTCCCTGGGCAGCAAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 90 bp | CCTCCAGGAGGCAGTGGACTCCGGCAGGCAGGGGCTCGCCAAGGTTaGTGGGAGGAGGCGGGGCTGCTGGGTAGTTCCGGAGAGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PPGGSGLRQAGARQG*WEEAGLLGSSGEPS Trigger: AGAGGGCTCTCCGGAACTACCCAGCAGCCCCGCCTCCTCCCACCAACCTTGGCGAGCCCCTGCCTGCCGGAGTCCACTGCCTCCTGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS GCA 90 bp | GGCTGCGGACACGTCCCCCGTGTACCAGCCGGTTACGCTTGTACTTaGCCTCCTCACGGGAGCCATCGGGCCGGGTGGTGCGCCCGTATC | + |
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Preference number: 5 (lower is better) Translates to: GCGHVPRVPAGYACT*PPHGSHRAGWCARI Trigger: GATACGGGCGCACCACCCGGCCCGATGGCTCCCGTGAGGAGGGCAAGTACAAGCGTAACCGGCTGGTACACGGGGGACGTGTCCGCAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 90 bp | TTTAGGAGGGCGTCTGCTGCCCTGGCAGCCGCAATTTCCTGGCGCTaGCGGGCAGCACTCACAGCTCGACGGGCACCTTCGACAGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: FRRASAALAAAISWR*RAALTARRAPSTAL Trigger: CAGGGCTGTCGAAGGTGCCCGTCGAGCTGTGAGTGCTGCCCGCCAGCGCCAGGAAATTGCGGCTGCCAGGGCAGCAGACGCCCTCCTAAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 90 bp | GGCCTGGGGCCTCTAACATGGGTTGTAGATCCTGGGCTATCAGCTTaGCCATCCGCGCAGCCTCCACAGCCTTCTCCGCGACGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GLGPLTWVVDPGLSA*PSAQPPQPSPRRCW Trigger: CCAGCAGCGTCGCGGAGAAGGCTGTGGAGGCTGCGCGGATGGCCAAGCTGATAGCCCAGGATCTACAACCCATGTTAGAGGCCCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGCAGCTTGCCTCTGCCTCATGCAGGGTAGGAAAGTCCCCCGGGGTTCCAGTGGTAGGGTACACTTaGGCGCACCCCGTAGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: GRQLASASCRVGKSPGVPVVGYT*AHPVAV Trigger: CACGGCTACGGGGTGCGCCAAAGTGTACCCTACCAC...TGGAACCCCGGGGGACTTTCCTACCCTGCATGAGGCAGAGGCAAGCTGCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| CDS-3UTR CAA 90 bp | TCCTGCAGCTTTCCCTTGGGGCCAGTGAGCCCCAAGTGGCTCAGGCAGTGCCTTCGTAGAGATCCCCTCTaGCTGCCCAGGGAGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: SCSFPLGPVSPKWLRQCLRRDPL*LPRELR Trigger: CCGCAGCTCCCTGGGCAGCAAGAGGGGATCTCTACG...AAGGCACTGCCTGAGCCACTTGGGGCTCACTGGCCCCAAGGGAAAGCTGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCAGCTTTCCCTTGGGGCCAGTGAGCCCCAAGTGGCTCAGGCAGTGCCTTTCCTGGGCTATCAGCTaGGCCATCCGCGCAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SCSFPLGPVSPKWLRQCLSWAIS*AIRAAS Trigger: GGAGGCTGCGCGGATGGCCAAGCTGATAGCCCAGGA...AAGGCACTGCCTGAGCCACTTGGGGCTCACTGGCCCCAAGGGAAAGCTGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTCGTAGAGATCCCCTCTaGCTGCCCAGGGAGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: CGAAASSDSPLAPISQESRRDPL*LPRELR Trigger: CCGCAGCTCCCTGGGCAGCAAGAGGGGATCTCTACG...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 90 bp | GGCGTGGTGACAGGCTCAGACTCTGAGCCTCCTGGGGCCCTCAGTTaGGGCAAGGACTCTTCGTCTTCCCCCTCCTCCTCTCGAAGACTT | + |
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Preference number: 5 (lower is better) Translates to: GVVTGSDSEPPGALS*GKDSSSSPSSSRRL Trigger: AAGTCTTCGAGAGGAGGAGGGGGAAGACGAAGAGTCCTTGCCCCAACTGAGGGCCCCAGGAGGCTCAGAGTCTGAGCCTGTCACCACGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGACTGGGGTCCTCGCTTGCTGCAGCGCCTCTAACCCTCTGCAGAAATGTTCCTGGGCTATCAGCTaGGCCATCCGCGCAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LRTGVLACCSASNPLQKCSWAIS*AIRAAS Trigger: GGAGGCTGCGCGGATGGCCAAGCTGATAGCCCAGGA...ACATTTCTGCAGAGGGTTAGAGGCGCTGCAGCAAGCGAGGACCCCAGTCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCACCCACCACCAGGGGGTaGGCAGCTCCCGGCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPPTTRG*AAPGWA Trigger: TGCCCAGCCGGGAGCTGCCAACCCCCTGGTGGTGGG...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS TCA 90 bp | GGGCAAGGACTCTTCGTCTTCCCCCTCCTCCTCTCGAAGACTTCCTaGACTGTCACTGCAGCCTCCGAGAAGTGGGGAACCATCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: GQGLFVFPLLLSKTS*TVTAASEKWGTISW Trigger: CCAAGAGATGGTTCCCCACTTCTCGGAGGCTGCAGTGACAGTTCAGGAAGTCTTCGAGAGGAGGAGGGGGAAGACGAAGAGTCCTTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGGCAGCGGCTTCCTCTGATTCCCCGTTAGCTCCCATCTCGCAGGAGTCTCTGTCCACTTTCTCCTaGACTTTGCCCCGTCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: CGAAASSDSPLAPISQESLSTFS*TLPRLR Trigger: CCTTAGACGGGGCAAAGTCAAGGAGAAAGTGGACAG...AGACTCCTGCGAGATGGGAGCTAACGGGGAATCAGAGGAAGCCGCTGCCCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | AGGAGTCTACGCGAGGGGTTAGAAACTAGACTTGTGACAGCATCTGCTGCCCTTGTGGGGAACCATCTCTaGGTCCTGGACCCTGCACCC | + |
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Preference number: 5 (lower is better) Translates to: RSLREGLETRLVTASAALVGNHL*VLDPAP Trigger: GGGTGCAGGGTCCAGGACCAAGAGATGGTTCCCCAC...AAGGGCAGCAGATGCTGTCACAAGTCTAGTTTCTAACCCCTCGCGTAGACTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | ATGCATTTCCTTTCTCCCCTCCACTCAGATTCCAGGAGATTCCTCAGGACACCAGTGGTAGGGTACACTTaGGCGCACCCCGTAGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: MHFLSPLHSDSRRFLRTPVVGYT*AHPVAV Trigger: CACGGCTACGGGGTGCGCCAAAGTGTACCCTACCAC...TGGTGTCCTGAGGAATCTCCTGGAATCTGAGTGGAGGGGAGAAAGGAAATGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCGTGGGGAACCATCTCTaGGTCCTGGACCCTGCACCC | + |
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Preference number: 5 (lower is better) Translates to: GWERKTRKTRDGSRINETVGNHL*VLDPAP Trigger: GGGTGCAGGGTCCAGGACCAAGAGATGGTTCCCCAC...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | CAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCATGAACCCACCACCAGGGGGTaGGCAGCTCCCGGCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: QDLMLAALLYNFNPKFHEPTTRG*AAPGWA Trigger: TGCCCAGCCGGGAGCTGCCAACCCCCTGGTGGTGGG...TTCATGGAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| CDS-3UTR CAA 90 bp | GGGTGGGAAAGAAAAACCAGGAAGACCAGAGACGGGTCCAGAATAAATGAGACCACTTTCTCCTTGACTTaGCCCCGTCTAAGGGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: GWERKTRKTRDGSRINETTFSLT*PRLRAR Trigger: TCTGGCCCTTAGACGGGGCAAAGTCAAGGAGAAAGT...GGTCTCATTTATTCTGGACCCGTCTCTGGTCTTCCTGGTTTTTCTTTCCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS-3UTR CAA 90 bp | CAAGACTTGATGTTGGCGGCACTGTTGTATAACTTCAATCCCAAATTCCATGAAACCAGCCGGTTACGCTaGTACTTGCCCTCCTCACGG | + |
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Preference number: 5 (lower is better) Translates to: QDLMLAALLYNFNPKFHETSRLR*YLPSSR Trigger: CCGTGAGGAGGGCAAGTACAAGCGTAACCGGCTGGT...TTCATGGAATTTGGGATTGAAGTTATACAACAGTGCCGCCAACATCAAGTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022819.13 |
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| CDS GCA 72 bp | CGTAGCGCAGGCCGGACACGCTCTCCCATACGCCGCTaGGCCCCTTCAGCCCGCCCAGCCACTCGCCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: RSAGRTRSPIRR*APSARPATRRG Trigger: ACCGCGGCGAGTGGCTGGGCGGGCTGAAGGGGCGCAGCGGCGTATGGGAGAGCGTGTCCGGCCTGCGCTACG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS TCA 72 bp | GCGGCGCCCACCAGCCCGGAGCCCGCTGAGCAGCAGTaGACGGCGGAAGAATCCACCTGCTGCTGGGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: AAPTSPEPAEQQ*TAEESTCCWGA Trigger: CGCACCCCAGCAGCAGGTGGATTCTTCCGCCGTTCACTGCTGCTCAGCGGGCTCCGGGCTGGTGGGCGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS TCA 72 bp | GTCGCTGTGGCCGGAGTCCAGGGAGGTGCGGCGGGGTaGGCGCAGAAGCGCCGCCTGGTGGTAGGGTACACT | + |
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Preference number: 6 (lower is better) Translates to: VAVAGVQGGAAG*AQKRRLVVGYT Trigger: AGTGTACCCTACCACCAGGCGGCGCTTCTGCGCTCACCCCGCCGCACCTCCCTGGACTCCGGCCACAGCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 72 bp | GGCAGTGGACTCCGGCAGGCAGGGGCTCGCCAAGGTTaGTGGGAGGAGGCGGGGCTGCTGGGTAGTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GSGLRQAGARQG*WEEAGLLGSSG Trigger: TCCGGAACTACCCAGCAGCCCCGCCTCCTCCCACCAACCTTGGCGAGCCCCTGCCTGCCGGAGTCCACTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS GCA 72 bp | AGCGGCTCTTGCGCTCCACGCCCAGCCCTTCGCGCTTaGCCTGCTGCCAGTGGCCCTGGTAACTGTGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SGSCAPRPALRA*PAASGPGNCVR Trigger: GCGGACACAGTTACCAGGGCCACTGGCAGCAGGGCAAGCGCGAAGGGCTGGGCGTGGAGCGCAAGAGCCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 72 bp | GCGTCTGCTGCCCTGGCAGCCGCAATTTCCTGGCGCTaGCGGGCAGCACTCACAGCTCGACGGGCACCTTCG | + |
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Preference number: 6 (lower is better) Translates to: ASAALAAAISWR*RAALTARRAPS Trigger: CGAAGGTGCCCGTCGAGCTGTGAGTGCTGCCCGCCAGCGCCAGGAAATTGCGGCTGCCAGGGCAGCAGACGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 72 bp | AGGAGGGCGTCTGCTGCCCTGGCAGCCGCAATTTCCTaGCGCTGGCGGGCAGCACTCACAGCTCGACGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRASAALAAAIS*RWRAALTARRA Trigger: TGCCCGTCGAGCTGTGAGTGCTGCCCGCCAGCGCCAGGAAATTGCGGCTGCCAGGGCAGCAGACGCCCTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 72 bp | GGGGGTTGGCAGCTCCCGGCTGGGCAGGCCTCTCGGTaGGAGCAGGCTCCTCAACCTCTTCTGTCAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: GGWQLPAGQASR*EQAPQPLLSGT Trigger: GGTGCCTGACAGAAGAGGTTGAGGAGCCTGCTCCCACCGAGAGGCCTGCCCAGCCGGGAGCTGCCAACCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CAA 90 bp | AGGCTGCGGACACGTCCCCCGTGTACCAGCCGGTTACGCTTGTACTaGCCCTCCTCACGGGAGCCATCGGGCCGGGTGGTGCGCCCGTAT | + |
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Preference number: 6 (lower is better) Translates to: RLRTRPPCTSRLRLY*PSSREPSGRVVRPY Trigger: ATACGGGCGCACCACCCGGCCCGATGGCTCCCGTGAGGAGGGCAAGTACAAGCGTAACCGGCTGGTACACGGGGGACGTGTCCGCAGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS GCA 72 bp | CACGTCCCCCGTGTACCAGCCGGTTACGCTTGTACTTaGCCTCCTCACGGGAGCCATCGGGCCGGGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: HVPRVPAGYACT*PPHGSHRAGWC Trigger: GCACCACCCGGCCCGATGGCTCCCGTGAGGAGGGCAAGTACAAGCGTAACCGGCTGGTACACGGGGGACGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 72 bp | TCCGCGCAGCCTCCACAGCCTTCTCCGCGACGCTGCTaGCTGCCACTGCTTTTAGGAGGGCGTCTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SAQPPQPSPRRC*LPLLLGGRLLP Trigger: GGGCAGCAGACGCCCTCCTAAAAGCAGTGGCAGCCAGCAGCGTCGCGGAGAAGGCTGTGGAGGCTGCGCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS GCA 72 bp | CCATCCGCGCAGCCTCCACAGCCTTCTCCGCGACGCTaGTGGCTGCCACTGCTTTTAGGAGGGCGTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSAQPPQPSPRR*WLPLLLGGRLL Trigger: CAGCAGACGCCCTCCTAAAAGCAGTGGCAGCCAGCAGCGTCGCGGAGAAGGCTGTGGAGGCTGCGCGGATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CAA 72 bp | ACACGTCCCCCGTGTACCAGCCGGTTACGCTTGTACTaGCCCTCCTCACGGGAGCCATCGGGCCGGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TRPPCTSRLRLY*PSSREPSGRVV Trigger: CACCACCCGGCCCGATGGCTCCCGTGAGGAGGGCAAGTACAAGCGTAACCGGCTGGTACACGGGGGACGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CAA 72 bp | CCCGTAGCCGTGGCGTTTCCCGGCTTGCCACTGGCCTaGGTAAGTGCCTCCATCCGAGTAGGTCTCGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PVAVAFPGLPLA*VSASIRVGLGA Trigger: GGCACCGAGACCTACTCGGATGGAGGCACTTACCAAGGCCAGTGGCAAGCCGGGAAACGCCACGGCTACGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 72 bp | CTGCGGCCTGGGGCCTCTAACATGGGTTGTAGATCCTaGGCTATCAGCTTGGCCATCCGCGCAGCCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: LRPGASNMGCRS*AISLAIRAAST Trigger: TGTGGAGGCTGCGCGGATGGCCAAGCTGATAGCCCAGGATCTACAACCCATGTTAGAGGCCCCAGGCCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS CCA 72 bp | CCTCTAACATGGGTTGTAGATCCTGGGCTATCAGCTTaGCCATCCGCGCAGCCTCCACAGCCTTCTCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: PLTWVVDPGLSA*PSAQPPQPSPR Trigger: TCGCGGAGAAGGCTGTGGAGGCTGCGCGGATGGCCAAGCTGATAGCCCAGGATCTACAACCCATGTTAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS TCA 72 bp | CTCTTCGTCTTCCCCCTCCTCCTCTCGAAGACTTCCTaGACTGTCACTGCAGCCTCCGAGAAGTGGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: LFVFPLLLSKTS*TVTAASEKWGT Trigger: GGTTCCCCACTTCTCGGAGGCTGCAGTGACAGTTCAGGAAGTCTTCGAGAGGAGGAGGGGGAAGACGAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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| CDS GCA 72 bp | CCCCCTCCTCCTCTCGAAGACTTCCTGAACTGTCACTaGAGCCTCCGAGAAGTGGGGAACCATCTCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PPPPLEDFLNCH*SLREVGNHLLV Trigger: GACCAAGAGATGGTTCCCCACTTCTCGGAGGCTGCAGTGACAGTTCAGGAAGTCTTCGAGAGGAGGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022819.13 ENSMUST00000124493.2 |
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