Pregenerated sensors for JPH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042686Ensembl transcript IDs: ENSMUST00000038382.5, ENSMUST00000186024.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTACTATCCAGAAGGTGATGAAGCACTCAGTCCTCCCCTGTGCTaGCAGTGGAGTGACACGCACTGTCCCTTCTGCTCTGCAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: AYYPEGDEALSPPLC*QWSDTHCPFCSAKA Trigger: AGCCTTTGCAGAGCAGAAGGGACAGTGCGTGTCACTCCACTGGCAGCACAGGGGAGGACTGAGTGCTTCATCACCTTCTGGATAGTAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR GCA 90 bp | CTGGCTTACTATCCAGAAGGTGATGAAGCACTCAGTCCTCCCCTGTaGTGCCAGTGGAGTGACACGCACTGTCCCTTCTGCTCTGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: LAYYPEGDEALSPPL*CQWSDTHCPFCSAK Trigger: CTTTGCAGAGCAGAAGGGACAGTGCGTGTCACTCCACTGGCAGCACAGGGGAGGACTGAGTGCTTCATCACCTTCTGGATAGTAAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR CCA 90 bp | TATCCAGAAGGTGATGAAGCACTCAGTCCTCCCCTGTGCTGCCAGTaGAGTGACACGCACTGTCCCTTCTGCTCTGCAAAGGCTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: YPEGDEALSPPLCCQ*SDTHCPFCSAKAPK Trigger: CTTAGGAGCCTTTGCAGAGCAGAAGGGACAGTGCGTGTCACTCCACTGGCAGCACAGGGGAGGACTGAGTGCTTCATCACCTTCTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR GCA 90 bp | CCAAGTTTCATCTCTCTTGTGATCCCATCCCGATCTAAGCGTCCTTaGCTGTGTCTGAGTCGGACTGGGATGTGGACACCAAGGCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: PSFISLVIPSRSKRP*LCLSRTGMWTPRQN Trigger: GTTCTGCCTTGGTGTCCACATCCCAGTCCGACTCAGACACAGGCAAGGACGCTTAGATCGGGATGGGATCACAAGAGAGATGAAACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR CCA 90 bp | TCCCGATCTAAGCGTCCTTGCCTGTGTCTGAGTCGGACTGGGATGTaGACACCAAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATG | + |
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Preference number: 1 (lower is better) Translates to: SRSKRPCLCLSRTGM*TPRQNCGLTLLVVM Trigger: CATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTTGGTGTCCACATCCCAGTCCGACTCAGACACAGGCAAGGACGCTTAGATCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR CCA 90 bp | CCTGTGTCTGAGTCGGACTGGGATGTGGACACCAAGGCAGAACTGTaGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGAAA | + |
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Preference number: 1 (lower is better) Translates to: PVSESDWDVDTKAEL*ANSTSCHDFTDESK Trigger: TTTCGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTTGGTGTCCACATCCCAGTCCGACTCAGACACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR TCA 90 bp | ACATTCCAGGAGATGTTAAAGCAGCAGGTCACAGCAGAAGACTGCTaGGTGACGGTGCTACCTACTTCTAATGAGATAGGAGTGAATGTT | + |
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Preference number: 1 (lower is better) Translates to: TFQEMLKQQVTAEDC*VTVLPTSNEIGVNV Trigger: AACATTCACTCCTATCTCATTAGAAGTAGGTAGCACCGTCACTCAGCAGTCTTCTGCTGTGACCTGCTGCTTTAACATCTCCTGGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR TCA 90 bp | GCATTCTCCTGTGGAGCTCTGCATCTATTCCCATCAGTTACTGAATaGAGTCTCTCTGGTCTGTTTGATGATGATTATGGATTAGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: AFSCGALHLFPSVTE*SLSGLFDDDYGLGS Trigger: AGAGCCTAATCCATAATCATCATCAAACAGACCAGAGAGACTTCATTCAGTAACTGATGGGAATAGATGCAGAGCTCCACAGGAGAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
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| 3UTR GCA 90 bp | TATGTATATATAGATATATATAGATATAAACTAGTCTTTTGTTGCTaGTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: YVYIDIYRYKLVFCC*FSSVFSSSQDCRWK Trigger: CTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAGCAGCAACAAAAGACTAGTTTATATCTATATATATCTATATATACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR GCA 90 bp | ATATATGTATATATAGATATATATAGATATAAACTAGTCTTTTGTTaGTGCTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: IYVYIDIYRYKLVFC*CFSSVFSSSQDCRW Trigger: CCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAGCAGCAACAAAAGACTAGTTTATATCTATATATATCTATATATACATATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAAGGGAGAGACTCGGCTaGCACCATGACACCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: VGTTEELSLLLSKNGLPKRERLG*HHDTMD Trigger: GTCCATGGTGTCATGGTGTCAGCCGAGTCTCTCCCT...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR CCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATGATAGGAGTGAATGTTaGAGCCACGCCCACCGCAAC | + |
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Preference number: 2 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHDRSEC*SHAHRN Trigger: GTTGCGGTGGGCGTGGCTCCAACATTCACTCCTATC...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAACATTGCTGGGGGACGTaGAAGGTCCTCTGGCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: VGTTEELSLLLSKNGLPKHCWGT*KVLWLN Trigger: ATTCAGCCAGAGGACCTTTCACGTCCCCCAGCAATG...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAACGATCTAAGCGTCCTTaGCTGTGTCTGAGTCGGACT | + |
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Preference number: 2 (lower is better) Translates to: KSQYIALLEKPLLAYYPERSKRP*LCLSRT Trigger: AGTCCGACTCAGACACAGGCAAGGACGCTTAGATCG...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAATGCTTTTCACCATGCTaGGTGCTTCAGCTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VGTTEELSLLLSKNGLPKCFSPC*VLQLSE Trigger: CTCTGAGAGCTGAAGCACCCAGCATGGTGAAAAGCA...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAATTCGCCGGATGGGGCTaGTTCAGCAGAGTTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: VGTTEELSLLLSKNGLPKFAGWG*FSRVLK Trigger: TTTTAAAACTCTGCTGAAGCAGCCCCATCCGGCGAA...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR GCA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTTTTCACCATGCTGGGTaGTTCAGCTCTCAGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: NETEPVTTDYCNPSNILTFHHAG*FSSQRT Trigger: GGTCCTCTGAGAGCTGAAGCACCCAGCATGGTGAAA...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAAGAGAACTTCGCCGGATaGGGCTGCTTCAGCAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: KQSHVLLSTLADFTCCPKENFAG*GCFSRV Trigger: AACTCTGCTGAAGCAGCCCCATCCGGCGAAGTTCTC...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAACAGACTGCATTCCTCTaGCAGTCCTCTCTCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KQSHVLLSTLADFTCCPKQTAFL*QSSLSS Trigger: GCTGGAGAGAGAGGACTGCCAGAGGAATGCAGTCTG...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR CAA 90 bp | TATGGATTAGGCTCTGGTCCCAAAATACTGTCCAGGCAGGTCAAATaGAAGGTCAAAGGTTTTGTGTTTGGTTGTTGTCATAATCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: YGLGSGPKILSRQVK*KVKGFVFGCCHNPS Trigger: GGAAGGATTATGACAACAACCAAACACAAAACCTTTGACCTTCAATTTGACCTGCCTGGACAGTATTTTGGGACCAGAGCCTAATCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAATTAATAGAGCCACTGACAAGATTTTATTTGGTTGTAACGTACGTCAGCAATCAACAGCAGAAATaGGCAGAGTCGTGCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: WELIEPLTRFYLVVTYVSNQQQK*AESCTS Trigger: GCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATT...GCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAAAACTAGTCTTTTGTTaGTGCTTTTCCAGTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VGTTEELSLLLSKNGLPKKLVFC*CFSSVF Trigger: GAACACACTGGAAAAGCAGCAACAAAAGACTAGTTT...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAAACGCACTGTCCCTTCTaGTCTGCAAAGGCTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: KQSHVLLSTLADFTCCPKTHCPF*SAKAPK Trigger: CTTAGGAGCCTTTGCAGAGCAGAAGGGACAGTGCGT...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR CCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAAGTCGGACTGGGATGTaGACACCAAGGCAGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKSRTGM*TPRQNC Trigger: ACAGTTCTGCCTTGGTGTCCACATCCCAGTCCGACT...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAATTCCTTAATCCATACTaGTCATACCCTAAAGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VGTTEELSLLLSKNGLPKFLNPY*SYPKVS Trigger: TGAGACTTTAGGGTATGACCAGTATGGATTAAGGAA...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAATGGAGAAGCCACTGCTaGCTTACTATCCAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: KQSHVLLSTLADFTCCPKWRSHC*LTIQKV Trigger: CACCTTCTGGATAGTAAGCCAGCAGTGGCTTCTCCA...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAATTTTGCTTTTCACCATaGTGGGTGCTTCAGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKFCFSP*WVLQLS Trigger: TGAGAGCTGAAGCACCCAGCATGGTGAAAAGCAAAA...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAATCATTATTAAGTTTTaGTTTTCACCATGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKIIIKF*FSPCWV Trigger: CACCCAGCATGGTGAAAAGCAAAACTTAATAATGAT...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR GCA 72 bp | CTGTGCTGCCAGTGGAGTGACACGCACTGTCCCTTCTaGTCTGCAAAGGCTCCTAAGGGAGAGACTCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LCCQWSDTHCPF*SAKAPKGETRL Trigger: CAGCCGAGTCTCTCCCTTAGGAGCCTTTGCAGAGCAGAAGGGACAGTGCGTGTCACTCCACTGGCAGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR CCA 72 bp | GGTGATGAAGCACTCAGTCCTCCCCTGTGCTGCCAGTaGAGTGACACGCACTGTCCCTTCTGCTCTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GDEALSPPLCCQ*SDTHCPFCSAK Trigger: CTTTGCAGAGCAGAAGGGACAGTGCGTGTCACTCCACTGGCAGCACAGGGGAGGACTGAGTGCTTCATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR GCA 72 bp | ATCTCTCTTGTGATCCCATCCCGATCTAAGCGTCCTTaGCTGTGTCTGAGTCGGACTGGGATGTGGACACCA | + |
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Preference number: 3 (lower is better) Translates to: ISLVIPSRSKRP*LCLSRTGMWTP Trigger: TGGTGTCCACATCCCAGTCCGACTCAGACACAGGCAAGGACGCTTAGATCGGGATGGGATCACAAGAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR CCA 72 bp | AAGCGTCCTTGCCTGTGTCTGAGTCGGACTGGGATGTaGACACCAAGGCAGAACTGTGGGCTAACTCTACTA | + |
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Preference number: 3 (lower is better) Translates to: KRPCLCLSRTGM*TPRQNCGLTLL Trigger: TAGTAGAGTTAGCCCACAGTTCTGCCTTGGTGTCCACATCCCAGTCCGACTCAGACACAGGCAAGGACGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR TCA 72 bp | GCAAAGGCTCCTAAGGGAGAGACTCGGCTGACACCATaGCACCATGGACAAAAGTTAGGAAGACTTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: AKAPKGETRLTP*HHGQKLGRLPP Trigger: AGGGGGAAGTCTTCCTAACTTTTGTCCATGGTGTCATGGTGTCAGCCGAGTCTCTCCCTTAGGAGCCTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR TCA 72 bp | GAGATGTTAAAGCAGCAGGTCACAGCAGAAGACTGCTaGGTGACGGTGCTACCTACTTCTAATGAGATAGGA | + |
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Preference number: 3 (lower is better) Translates to: EMLKQQVTAEDC*VTVLPTSNEIG Trigger: TCCTATCTCATTAGAAGTAGGTAGCACCGTCACTCAGCAGTCTTCTGCTGTGACCTGCTGCTTTAACATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR GCA 72 bp | TGCTGCTTTTCCAGTGTGTTCTCATCCAGCCAGGACTaGAGGTGGAAGATGACATACATCATATTTAAATCA | + |
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Preference number: 3 (lower is better) Translates to: CCFSSVFSSSQD*RWKMTYIIFKS Trigger: TGATTTAAATATGATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAGCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR TCA 72 bp | TGTGGAGCTCTGCATCTATTCCCATCAGTTACTGAATaGAGTCTCTCTGGTCTGTTTGATGATGATTATGGA | + |
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Preference number: 3 (lower is better) Translates to: CGALHLFPSVTE*SLSGLFDDDYG Trigger: TCCATAATCATCATCAAACAGACCAGAGAGACTTCATTCAGTAACTGATGGGAATAGATGCAGAGCTCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
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| 3UTR CCA 72 bp | TTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTaGAAGATGACATACATCATATTTAAATCAACAGCA | + |
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Preference number: 3 (lower is better) Translates to: FSSVFSSSQDCR*KMTYIIFKSTA Trigger: TGCTGTTGATTTAAATATGATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR TCA 72 bp | TTGTCTGTCCTTCAGCTTTTAAAACTTAACACCTCCTaGGTGCATCAACAACTCACCTCAATGATGTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: LSVLQLLKLNTS*VHQQLTSMMLK Trigger: TTTTAACATCATTGAGGTGAGTTGTTGATGCACTCAGGAGGTGTTAAGTTTTAAAAGCTGAAGGACAGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR GCA 72 bp | AGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTaGTGTCCAAAATGTAGAGTACAGTATAACAACCCA | + |
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Preference number: 3 (lower is better) Translates to: SHVLLSTLADFT*CPKCRVQYNNP Trigger: TGGGTTGTTATACTGTACTCTACATTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| 3UTR-3UTR CAA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAAACAGAGGAACTTAGCTaGCTCTTGAGTAAAAATGGA | + |
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Preference number: 3 (lower is better) Translates to: KQSHVLLSTLADFTCCPKTEELS*LLSKNG Trigger: TCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGT...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR GCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAGGCCCTTGGGCCCCGTaGAGATGCCATGCCCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: VGTTEELSLLLSKNGLPKGPWAP*RCHARA Trigger: CGCACGGGCATGGCATCTGCACGGGGCCCAAGGGCC...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR GCA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGCCAGCCCGTGCCGCTTaGCCTGCGCCCAGTAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KAELWANSTSCHDFTDESPARAA*PAPSSP Trigger: AGGGCTACTGGGCGCAGGGCAAGCGGCACGGGCTGG...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR GCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATCAGATGCCATGCCCGTaGGCCTTGCCCTCCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHQMPCP*ALPSSQ Trigger: CTGGGAGGAGGGCAAGGCGCACGGGCATGGCATCTG...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR CCA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGCCAGAGTACTCGCCCTaGCCCTTGGGCCCCGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: KAELWANSTSCHDFTDESPEYSP*PLGPVQ Trigger: CTGCACGGGGCCCAAGGGCCAGGGCGAGTACTCTGG...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR GCA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGCGTAGCCATGCCGCATaGCTCCAGCCCACTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KAELWANSTSCHDFTDESRSHAA*LQPTGP Trigger: AGGGCCAGTGGGCTGGAGGCATGCGGCATGGCTACG...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR GCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAACGCTGCCGTTGCTCTaGTCACTGCGCAGCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VGTTEELSLLLSKNGLPKTLPLL*SLRSEA Trigger: GGCCTCGCTGCGCAGTGAGCAGAGCAACGGCAGCGT...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR CCA 90 bp | GTTTTGTGTTTGGTTGTTGTCATAATCCTTCCACTTGAGGCCTTGCCTGTCCTACCCCGTTGCTGGGGTTaGGGACATGGTGGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VLCLVVVIILPLEALPVLPRCWG*GHGGGQ Trigger: CTGGCCGCCACCATGTCCCCAACCCCAGCAACGGGG...TAGGACAGGCAAGGCCTCAAGTGGAAGGATTATGACAACAACCAAACACAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
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| CDS-3UTR CCA 90 bp | CTCACAGATGCATTCTCCTGTGGAGCTCTGCATCTATTCCCATCAGTTACTGAAGCAGCTCCCCGTTGCTaGGGTTGGGGACATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTDAFSCGALHLFPSVTEAAPRC*GWGHGG Trigger: GCCACCATGTCCCCAACCCCAGCAACGGGGAGCTGC...TTCAGTAACTGATGGGAATAGATGCAGAGCTCCACAGGAGAATGCATCTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAAAGCCGCCGCAGTAGGTaGCGCCATCGTCGAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSQYIALLEKPLLAYYPESRRSR*RHRRSR Trigger: TCGACTTCGACGATGGCGGCACCTACTGCGGCGGCT...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATCCCGGTACATCCACTTaGCCTTCGTCTCCACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHPGTST*PSSPPP Trigger: TGGGGGTGGAGACGAAGGGCAAGTGGATGTACCGGG...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAACGCCGTACCCGTCCTaGAGCCCGTTACTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTTEELSLLLSKNGLPKTPYPS*SPLLQV Trigger: GACCTGGAGTAACGGGCTGCAGGACGGGTACGGCGT...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGGGTTCTGGCCATGGCTaGCGCCCTTTGTGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAELWANSTSCHDFTDESGSGHG*RPLCTF Trigger: GAAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACC...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATGGGAACGGATCACTGTaGCCATGCCATAGGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHGNGSL*PCHRAH Trigger: GTGTGCCCTATGGCATGGCCACAGTGATCCGTTCCC...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAAGCTATGTCGCACTCCTaGCGAGCAGCCAGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSQYIALLEKPLLAYYPEAMSHS*RAASAA Trigger: AGCTGCACTGGCTGCTCGCCAGGAGTGCGACATAGC...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCTCTGCATCTATTCCCATCAGTTACTGAATGAAGTCTCTCTGGTCTGTCTGGGGTTGGGGACATaGTGGCGGCCAGAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VELCIYSHQLLNEVSLVCLGLGT*WRPEYL Trigger: CAAGTACTCTGGCCGCCACCATGTCCCCAACCCCAG...ACAGACCAGAGAGACTTCATTCAGTAACTGATGGGAATAGATGCAGAGCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAATGCGGAGTTTCATGCTaGCGAGAAGGGAACCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGTTEELSLLLSKNGLPKCGVSC*REGNPD Trigger: GTCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCA...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAACTTTGGTTCTGGCCATaGCTGCCGCCCTTTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGTTEELSLLLSKNGLPKLWFWP*LPPFVH Trigger: GTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAG...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGGTGCAGCCGTACCCATaGCTCTTGTTATTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAELWANSTSCHDFTDESVQPYP*LLLLAH Trigger: GTGGGCCAATAACAAGAGGCATGGGTACGGCTGCAC...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATTTTCCACTTTGGTTCTaGCCATGGCTGCCGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHFPLWF*PWLPPF Trigger: AAAGGGCGGCAGCCATGGCCAGAACCAAAGTGGAAA...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGTTGGTAGAAATCAGGTaGCAGCTCTCTGGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAELWANSTSCHDFTDESLVEIR*QLSGHS Trigger: GCTGTGGCCAGAGAGCTGTCACCTGATTTCTACCAA...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR TCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAAGGCTCTGTTTATCTTaGCTGAGTCTTGCCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGTTEELSLLLSKNGLPKRLCLS*LSLAPG Trigger: CCCAGGGGCAAGACTCAGTCAAGATAAACAGAGCCT...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR TCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAATCTAGGTACCAATGCTaGGGAAGACTGGCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGTTEELSLLLSKNGLPKSRYQC*GRLADS Trigger: GGAGTCAGCCAGTCTTCCTCAGCATTGGTACCTAGA...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAAGGCTGCCGCCCTTTGTaGACCTTCAATTGCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: KSQYIALLEKPLLAYYPEGCRPL*TFNCSI Trigger: GATAGAGCAATTGAAGGTGCACAAAGGGCGGCAGCC...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATTTGCTATTTCCACTTTaGTTCTGGCCATGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHLLFPL*FWPWLP Trigger: CGGCAGCCATGGCCAGAACCAAAGTGGAAATAGCAA...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGCAGGTGACAGCTCTCTaGCCACAGCTCTTGCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: KAELWANSTSCHDFTDESQVTAL*PQLLLC Trigger: ACATAGCAAGAGCTGTGGCCAGAGAGCTGTCACCTG...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR CCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAACCCCGTTGCTGGGGTTaGGGACATGGTGGCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQSHVLLSTLADFTCCPKPRCWG*GHGGGQ Trigger: CTGGCCGCCACCATGTCCCCAACCCCAGCAACGGGG...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAATCCTCCCTGTCTTCTaGAGGATGCTGGGGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGTTEELSLLLSKNGLPKILPVF*RMLGCV Trigger: AACACACCCCAGCATCCTCCAGAAGACAGGGAGGAT...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR TCA 90 bp | CAGATGCATTCTCCTGTGGAGCTCTGCATCTATTCCCATCAGTTACTGAATGAATCTAGGTACCAATGCTaGGGAAGACTGGCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QMHSPVELCIYSHQLLNESRYQC*GRLADS Trigger: GGAGTCAGCCAGTCTTCCTCAGCATTGGTACCTAGA...TTCATTCAGTAACTGATGGGAATAGATGCAGAGCTCCACAGGAGAATGCATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAAGCGAGGCCAGGGAAGTaGGCAGCGGGGAACGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: KQSHVLLSTLADFTCCPKARPGK*AAGNGS Trigger: TGATCCGTTCCCCGCTGCGCACTTCCCTGGCCTCGC...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGCAGCACGCTGCCGTTaGTCTGCTCACTGCGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKAARCR*SAHCAA Trigger: CGCTGCGCAGTGAGCAGAGCAACGGCAGCGTGCTGC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | TGGGAATTAATAGAGCCACTGACAAGATTTTATTTGGTTGTAACGTACGTCAGCTCATGGCTGCATCACTaGGGACCGAGCTGCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WELIEPLTRFYLVVTYVSSWLHH*GPSCAC Trigger: GCAAGCGCAGCTCGGTCCGCAGTGATGCAGCCATGA...GCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR GCA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAACTGTCTTCTGGAGGATaGTGGGGTGTGTTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSQYIALLEKPLLAYYPELSSGG*WGVFSF Trigger: GAAACTGAACACACCCCAGCATCCTCCAGAAGACAG...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR CCA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGTGCGCTTGCTGGAGATaGAAGACTTGGATTCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KAELWANSTSCHDFTDESCACWR*KTWIRT Trigger: AGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCA...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATCATCAGCTTTTGCTCTaGCATGTGCAGTCCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHHQLLL*HVQSLS Trigger: ACTCAAGGACTGCACATGCCAGAGCAAAAGCTGATG...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTCTGGGGTTGGGGACATaGTGGCGGCCAGAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NETEPVTTDYCNPSNILTLGLGT*WRPEYL Trigger: CAAGTACTCTGGCCGCCACCATGTCCCCAACCCCAG...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR CCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGCAGCTCCCCGTTGCTaGGGTTGGGGACATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKAAPRC*GWGHGG Trigger: GCCACCATGTCCCCAACCCCAGCAACGGGGAGCTGC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR CCA 90 bp | TGTTTGGTTGTTGTCATAATCCTTCCACTTGAGGCCTTGCCTGTCCTAATTCCAATCCTCCCTGTCTTCTaGAGGATGCTGGGGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLVVVIILPLEALPVLIPILPVF*RMLGCV Trigger: AACACACCCCAGCATCCTCCAGAAGACAGGGAGGAT...TGGAATTAGGACAGGCAAGGCCTCAAGTGGAAGGATTATGACAACAACCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAACGGGCTGTCTGCAGCTaGGGCTGCAGCTTCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKRAVCS*GCSFMQ Trigger: CTGCATGAAGCTGCAGCCGCAGCTGCAGACAGCCCG...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR GCA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTTCTGGCCACAGCTCTTaGTATGTCGCACTCCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NETEPVTTDYCNPSNILTSGHSS*YVALLA Trigger: CGCCAGGAGTGCGACATAGCAAGAGCTGTGGCCAGA...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATGGGGTGTGGTGCCTTTaGGATAAAAATGAGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHGVWCL*DKNEEI Trigger: AATCTCCTCATTTTTATCGCAAAGGCACCACACCCC...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR TCA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAAGGCATGTGCAGTCCTTaGGTTTGCTATTTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSQYIALLEKPLLAYYPEGMCSP*VCYFHF Trigger: AAAGTGGAAATAGCAAACTCAAGGACTGCACATGCC...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGTCTGCAGCTGCGGCTaGAGCTTCATGCAGCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKVCSCG*SFMQHA Trigger: AGCGTGCTGCATGAAGCTGCAGCCGCAGCTGCAGAC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAACTTATTGGTATAAGCTaGTTCCTTATCCCACGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KSQYIALLEKPLLAYYPELIGIS*FLIPRT Trigger: GGTCCGTGGGATAAGGAAGCAGCTTATACCAATAAG...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAAAATACTGTCCAGGCAGGTCAAATTGAAGGTCAAAGGTTTTGTGTTTCTGTCTTCTGGAGGATaGTGGGGTGTGTTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPKILSRQVKLKVKGFVFLSSGG*WGVFSF Trigger: GAAACTGAACACACCCCAGCATCCTCCAGAAGACAG...AAACACAAAACCTTTGACCTTCAATTTGACCTGCCTGGACAGTATTTTGGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATAAGGGCAGGTATCATTaGTTGCTGGATTCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHKGRYH*LLDSLV Trigger: TACCAAAGAATCCAGCAAGCAATGATACCTGCCCTT...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| 3UTR CAA 72 bp | GGCAGGGAGACTGTGGGGACGACAGAGGAACTTAGCTaGCTCTTGAGTAAAAATGGACTCCCTAAATTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRETVGTTEELS*LLSKNGLPKFK Trigger: TTTAAATTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCACAGTCTCCCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAACGACGTCACCAAAGCTaGTGGTGGAGTTGGCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: KQSHVLLSTLADFTCCPKRRHQS*WWSWHR Trigger: GCGATGCCAACTCCACCATCAGCTTTGGTGACGTCG...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAACTTCATGCAGCACGCTaGCGTTGCTCTGCTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKLHAAR*RCSAHC Trigger: GCAGTGAGCAGAGCAACGGCAGCGTGCTGCATGAAG...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGGACCGAGCTGCGCTTaGTGGAGATGGAAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKGPSCA*WRWKTW Trigger: CCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTAATAGAGCCACTGACAAGATTTTATTTGGTTGTAACGTACGTCAGCCCGAGCTGCGCTTGCTaGAGATGGAAGACTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WELIEPLTRFYLVVTYVSPSCAC*RWKTWI Trigger: AATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGG...GCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAATCTGGGGAGGAAGGCTaGGGAGAGTGGCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQSHVLLSTLADFTCCPKSGEEG*GEWLCL Trigger: CAAACAGAGCCACTCTCCCCAGCCTTCCTCCCCAGA...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGAGCTCTGCATCTATTCCCATCAGTTACTGAATGAAGTCTCTCTGGTCGCTTTCTTTGGCAACTaGTTTTGTCACAGATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVELCIYSHQLLNEVSLVAFFGN*FCHRFR Trigger: CCTAAATCTGTGACAAAACCAGTTGCCAAAGAAAGC...GACCAGAGAGACTTCATTCAGTAACTGATGGGAATAGATGCAGAGCTCCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATGGTATCATTGCTTGCTaGATTCTTTGGTATAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHGIIAC*ILWYSK Trigger: CTTGCTATACCAAAGAATCCAGCAAGCAATGATACC...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| 3UTR CAA 72 bp | GGCTCTGGTCCCAAAATACTGTCCAGGCAGGTCAAATaGAAGGTCAAAGGTTTTGTGTTTGGTTGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSGPKILSRQVK*KVKGFVFGCCH Trigger: ATGACAACAACCAAACACAAAACCTTTGACCTTCAATTTGACCTGCCTGGACAGTATTTTGGGACCAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAAGATTCTGCTCATGGCTaGATCACTGCGGACCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQSHVLLSTLADFTCCPKDSAHG*ITADRA Trigger: AGCTCGGTCCGCAGTGATGCAGCCATGAGCAGAATC...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | CAGATGCATTCTCCTGTGGAGCTCTGCATCTATTCCCATCAGTTACTGAATGAAGCAGGTATCATTGCTTaGTGGATTCTTTGGTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QMHSPVELCIYSHQLLNEAGIIA*WILWYS Trigger: GCTATACCAAAGAATCCAGCAAGCAATGATACCTGC...TTCATTCAGTAACTGATGGGAATAGATGCAGAGCTCCACAGGAGAATGCATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGTTGTTGTCATAATCCTTCCACTTGAGGCCTTGCCTGTCCTAATTCCAAAGGGCAGGTATCATTaGTTGCTGGATTCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLVVVIILPLEALPVLIPKGRYH*LLDSLV Trigger: TACCAAAGAATCCAGCAAGCAATGATACCTGCCCTT...TGGAATTAGGACAGGCAAGGCCTCAAGTGGAAGGATTATGACAACAACCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTCATGCCTCTTGTTATTaGCCCACTCGCCTTCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: NETEPVTTDYCNPSNILTHASCY*PTRLRT Trigger: AGTACGAAGGCGAGTGGGCCAATAACAAGAGGCATG...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGAAGGCTGGGGAGAGTaGCTCTGTTTGGGACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKEGWGE*LCLGLD Trigger: GTCAAGTCCCAAACAGAGCCACTCTCCCCAGCCTTC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR TCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAATCTGTTTATCTTGACTaGGTCTTGCCCCTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKSVYLD*VLPLGW Trigger: CCAGCCCAGGGGCAAGACTCAGTCAAGATAAACAGA...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAACATCAGGAAACACAGTaGAGCCGTACCCATGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKHQETQ*SRTHAS Trigger: AGAGGCATGGGTACGGCTGCACTGTGTTTCCTGATG...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGGCAGCATCAGCTTTTaGTCTGGCATGTGCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKGSISF*SGMCSP Trigger: AGGACTGCACATGCCAGAGCAAAAGCTGATGCTGCC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAAATCTTGACTGAGTCTTaGCCCTGGGCTGGGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQSHVLLSTLADFTCCPKILTES*PWAGVL Trigger: CAAAACCCCAGCCCAGGGGCAAGACTCAGTCAAGAT...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGTCTTGCCCCTGGGCTaGGGTTTTGTTTCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKVLPLG*GFVSLR Trigger: CCTCAAAGAAACAAAACCCCAGCCCAGGGGCAAGAC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | CAGATGCATTCTCCTGTGGAGCTCTGCATCTATTCCCATCAGTTACTGAATGAAGGTATCATTGCTTGCTaGATTCTTTGGTATAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QMHSPVELCIYSHQLLNEGIIAC*ILWYSK Trigger: CTTGCTATACCAAAGAATCCAGCAAGCAATGATACC...TTCATTCAGTAACTGATGGGAATAGATGCAGAGCTCCACAGGAGAATGCATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| 3UTR CAA 72 bp | CCCGTAACCACTGATTACTGCAATCCAAGCAACATTTaGACTTCACTTCTTAGTATTCGGTTGTCTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVTTDYCNPSNI*TSLLSIRLSVL Trigger: AAGGACAGACAACCGAATACTAAGAAGTGAAGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAAACTTGGATTCGGACTTaGGGAGTTTCATGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KQSHVLLSTLADFTCCPKTWIRT*GVSCCR Trigger: TCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGT...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCAGGCAGGTCAAATTGAAGGTCAAAGGTTTTGTGTTTGGTTGTTGTCACAGTTTTGCTTTCTTTaGCAACTGGTTTTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TVQAGQIEGQRFCVWLLSQFCFL*QLVLSQ Trigger: CTGTGACAAAACCAGTTGCCAAAGAAAGCAAAACTG...TGACAACAACCAAACACAAAACCTTTGACCTTCAATTTGACCTGCCTGGACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAAAATACTGTCCAGGCAGGTCAAATTGAAGGTCAAAGGTTTTGTGTTTGCTTGCTGGATTCTTTaGTATAGCAAGTTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPKILSRQVKLKVKGFVFACWIL*YSKFRL Trigger: AAGTCTGAACTTGCTATACCAAAGAATCCAGCAAGC...AAACACAAAACCTTTGACCTTCAATTTGACCTGCCTGGACAGTATTTTGGGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR GCA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTGCAGGTATCATTGCTTaGTGGATTCTTTGGTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NETEPVTTDYCNPSNILTAGIIA*WILWYS Trigger: GCTATACCAAAGAATCCAGCAAGCAATGATACCTGC...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAATGGAGATGGAAGACTTaGATTCGGACTTGCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKWRWKT*IRTCGV Trigger: AACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCA...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTAATAGAGCCACTGACAAGATTTTATTTGGTTGTAACGTACGTCAGCGCTTTCTTTGGCAACTaGTTTTGTCACAGATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WELIEPLTRFYLVVTYVSAFFGN*FCHRFR Trigger: CCTAAATCTGTGACAAAACCAGTTGCCAAAGAAAGC...GCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTAATAGAGCCACTGACAAGATTTTATTTGGTTGTAACGTACGTCAGCCAGTTTTGCTTTCTTTaGCAACTGGTTTTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WELIEPLTRFYLVVTYVSQFCFL*QLVLSQ Trigger: CTGTGACAAAACCAGTTGCCAAAGAAAGCAAAACTG...GCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| 3UTR CAA 72 bp | TCATGGGAATTAATAGAGCCACTGACAAGATTTTATTaGGTTGTAACGTACGTCAGCAATGAAACTGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SWELIEPLTRFY*VVTYVSNETEP Trigger: GGGTTCAGTTTCATTGCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR GCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAATTGTGCACCTTCAATTaGTCTATCCACCTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKLCTFN*SIHLLS Trigger: AGAGAGAAGGTGGATAGAGCAATTGAAGGTGCACAA...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CCA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGCTTGCTGGATTCTTTaGTATAGCAAGTTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKACWIL*YSKFRL Trigger: AAGTCTGAACTTGCTATACCAAAGAATCCAGCAAGC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | CAGCCGGGCTGTCTGCAGCTGCGGCTGCAGCTTCATGCAGCACGCTaGCGTTGCTCTGCTCACTGCGCAGCGAGGCCAGGGAAGTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QPGCLQLRLQLHAAR*RCSAHCAARPGKCA Trigger: TGCGCACTTCCCTGGCCTCGCTGCGCAGTGAGCAGAGCAACGGCAGCGTGCTGCATGAAGCTGCAGCCGCAGCTGCAGACAGCCCGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | CACGAAGCCACCTCTTGTTCCAGCCGGGCTGTCTGCAGCTGCGGCTaGAGCTTCATGCAGCACGCTGCCGTTGCTCTGCTCACTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HEATSCSSRAVCSCG*SFMQHAAVALLTAQ Trigger: CTGCGCAGTGAGCAGAGCAACGGCAGCGTGCTGCATGAAGCTGCAGCCGCAGCTGCAGACAGCCCGGCTGGAACAAGAGGTGGCTTCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | GTTGAGCACGAAGCCACCTCTTGTTCCAGCCGGGCTGTCTGCAGCTaGGGCTGCAGCTTCATGCAGCACGCTGCCGTTGCTCTGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VEHEATSCSSRAVCS*GCSFMQHAAVALLT Trigger: AGTGAGCAGAGCAACGGCAGCGTGCTGCATGAAGCTGCAGCCGCAGCTGCAGACAGCCCGGCTGGAACAAGAGGTGGCTTCGTGCTCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS TCA 90 bp | AGAGGCCGCCCTTCTTCTTGCCCAGTTCCGTGTCCGCATGGAAGTTaGGCACGAAGCCACCTCTTGTTCCAGCCGGGCTGTCTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRPSSCPVPCPHGS*ARSHLLFQPGCLQL Trigger: CAGCTGCAGACAGCCCGGCTGGAACAAGAGGTGGCTTCGTGCTCAACTTCCATGCGGACACGGAACTGGGCAAGAAGAAGGGCGGCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | CGACGGAAGAGGCCGCCCTTCTTCTTGCCCAGTTCCGTGTCCGCATaGAAGTTGAGCACGAAGCCACCTCTTGTTCCAGCCGGGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRKRPPFFLPSSVSA*KLSTKPPLVPAGLS Trigger: AGACAGCCCGGCTGGAACAAGAGGTGGCTTCGTGCTCAACTTCCATGCGGACACGGAACTGGGCAAGAAGAAGGGCGGCCTCTTCCGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | GGACCGAGCTGCGCTTGCTGGAGATGGAAGACTTGGATTCGGACTTaGGGAGTTTCATGCTGCCGAGAAGGGAACCCCGACGGAAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPSCACWRWKTWIRT*GVSCCREGNPDGRG Trigger: GCCTCTTCCGTCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | TCTGGCCACAGCTCTTGCTATGTCGCACTCCTGGCGAGCAGCCAGTaGAGCTTGGTCGGCAGCATCAGCTTTTGCTCTGGCATGTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SGHSSCYVALLASSQ*SLVGSISFCSGMCS Trigger: ACTGCACATGCCAGAGCAAAAGCTGATGCTGCCGACCAAGCTGCACTGGCTGCTCGCCAGGAGTGCGACATAGCAAGAGCTGTGGCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | CTGCATCACTGCGGACCGAGCTGCGCTTGCTGGAGATGGAAGACTTaGATTCGGACTTGCGGAGTTTCATGCTGCCGAGAAGGGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LHHCGPSCACWRWKT*IRTCGVSCCREGNP Trigger: GGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | CATAGTAGCCGTGATACTGAGAGTGCAGCTCCCCGTTGCTGGGGTTaGGGACATGGTGGCGGCCAGAGTACTTGGACACAGATGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSSRDTESAAPRCWG*GHGGGQSTWTQMLP Trigger: TGGGAGCATCTGTGTCCAAGTACTCTGGCCGCCACCATGTCCCCAACCCCAGCAACGGGGAGCTGCACTCTCAGTATCACGGCTACTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | TGCTGGAGATGGAAGACTTGGATTCGGACTTGCGGAGTTTCATGCTaGCGAGAAGGGAACCCCGACGGAAGAGGCCGCCCTTCTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CWRWKTWIRTCGVSC*REGNPDGRGRPSSC Trigger: GCAAGAAGAAGGGCGGCCTCTTCCGTCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | GCTTGCTGGAGATGGAAGACTTGGATTCGGACTTGCGGAGTTTCATaGTGCCGAGAAGGGAACCCCGACGGAAGAGGCCGCCCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ACWRWKTWIRTCGVS*CREGNPDGRGRPSS Trigger: AGAAGAAGGGCGGCCTCTTCCGTCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | ACAGCTCTTGCTATGTCGCACTCCTGGCGAGCAGCCAGTGCAGCTTaGTCGGCAGCATCAGCTTTTGCTCTGGCATGTGCAGTCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TALAMSHSWRAASAA*SAASAFALACAVLE Trigger: CTCAAGGACTGCACATGCCAGAGCAAAAGCTGATGCTGCCGACCAAGCTGCACTGGCTGCTCGCCAGGAGTGCGACATAGCAAGAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | TGCTCATGGCTGCATCACTGCGGACCGAGCTGCGCTTGCTGGAGATaGAAGACTTGGATTCGGACTTGCGGAGTTTCATGCTGCCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSWLHHCGPSCACWR*KTWIRTCGVSCCRE Trigger: TTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAGCCATGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | GCTGATGGTGGAGTTGGCATCGCTAGAACTGATTCTGCTCATGGCTaGATCACTGCGGACCGAGCTGCGCTTGCTGGAGATGGAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: ADGGVGIARTDSAHG*ITADRAALAGDGRL Trigger: AAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAGCCATGAGCAGAATCAGTTCTAGCGATGCCAACTCCACCATCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | CCCCACTTGTTAGGTGATGGTCTAGGTACCAATGCTGAGGAAGACTaGCTGACTCCTCTGTCATCCTCCCTGTCTTCTGGAGGATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHLLGDGLGTNAEED*LTPLSSSLSSGGCW Trigger: CCAGCATCCTCCAGAAGACAGGGAGGATGACAGAGGAGTCAGCCAGTCTTCCTCAGCATTGGTACCTAGACCATCACCTAACAAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038382.5 ENSMUST00000186024.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGGCACGAAGCCACCTCTaGTTCCAGCCGGGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KAELWANSTSCHDFTDESARSHL*FQPGCL Trigger: CAGACAGCCCGGCTGGAACAAGAGGTGGCTTCGTGC...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAACGGACCGAGCTGCGCTaGCTGGAGATGGAAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSQYIALLEKPLLAYYPERTELR*LEMEDL Trigger: CAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCG...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAGGCTCTGTTTGGGACTaGACTCAGGAGACCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGTTEELSLLLSKNGLPKGSVWD*TQETWG Trigger: CCCCCAGGTCTCCTGAGTCAAGTCCCAAACAGAGCC...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | CTCTGGCATGTGCAGTCCTTGAGTTTGCTATTTCCACTTTGGTTCTaGCCATGGCTGCCGCCCTTTGTGCACCTTCAATTGCTCTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LWHVQSLSLLFPLWF*PWLPPFVHLQLLYP Trigger: TGGATAGAGCAATTGAAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAGTGGAAATAGCAAACTCAAGGACTGCACATGCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | CTTTTGCTCTGGCATGTGCAGTCCTTGAGTTTGCTATTTCCACTTTaGTTCTGGCCATGGCTGCCGCCCTTTGTGCACCTTCAATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLWHVQSLSLLFPL*FWPWLPPFVHLQLL Trigger: GAGCAATTGAAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAGTGGAAATAGCAAACTCAAGGACTGCACATGCCAGAGCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | CATGTGCAGTCCTTGAGTTTGCTATTTCCACTTTGGTTCTGGCCATaGCTGCCGCCCTTTGTGCACCTTCAATTGCTCTATCCACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVQSLSLLFPLWFWP*LPPFVHLQLLYPPS Trigger: AGAAGGTGGATAGAGCAATTGAAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAGTGGAAATAGCAAACTCAAGGACTGCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTCCCCGGTACATCCACTaGCCCTTCGTCTCCACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NETEPVTTDYCNPSNILTPRYIH*PFVSTP Trigger: GGGGGTGGAGACGAAGGGCAAGTGGATGTACCGGGG...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | TGGGAATTAATAGAGCCACTGACAAGATTTTATTTGGTTGTAACGTACGTCAGCTGCAGCACGCTGCCGTaGCTCTGCTCACTGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WELIEPLTRFYLVVTYVSCSTLP*LCSLRS Trigger: GCTGCGCAGTGAGCAGAGCAACGGCAGCGTGCTGCA...GCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAGACTTGGATTCGGACTaGCGGAGTTTCATGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VGTTEELSLLLSKNGLPKDLDSD*RSFMLP Trigger: CGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTC...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAACCATGCCTCTTGTTATaGGCCCACTCGCCTTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VGTTEELSLLLSKNGLPKPCLLL*AHSPSY Trigger: GTACGAAGGCGAGTGGGCCAATAACAAGAGGCATGG...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGGACGACAGAGGAACTTAGCTTGCTCTTGAGTAAAAATGGACTCCCTAAAGGAGAGTGGCTCTGTTaGGGACTTGACTCAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VGTTEELSLLLSKNGLPKGEWLC*GLDSGD Trigger: GTCTCCTGAGTCAAGTCCCAAACAGAGCCACTCTCC...TTTAGGGAGTCCATTTTTACTCAAGAGCAAGCTAAGTTCCTCTGTCGTCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGCTGGAGATGGAAGACTaGGATTCGGACTTGCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAELWANSTSCHDFTDESLEMED*DSDLRS Trigger: ACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAG...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTCTCTGGCCACAGCTCTaGCTATGTCGCACTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NETEPVTTDYCNPSNILTLWPQL*LCRTPG Trigger: GCCAGGAGTGCGACATAGCAAGAGCTGTGGCCAGAG...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS TCA 90 bp | AGAGTACTTGGACACAGATGCTCCCAATTCTTTTGCGGGAGCCTTTaGCATAGAGGGTTTATTGACAAAGGCTGTCACTTGTTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVLGHRCSQFFCGSL*HRGFIDKGCHLFLS Trigger: GCTGAGGAACAAGTGACAGCCTTTGTCAATAAACCCTCTATGTCAAAGGCTCCCGCAAAAGAATTGGGAGCATCTGTGTCCAAGTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAACCCTTCCTGACATCTTaGTTTGATATAATCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KSQYIALLEKPLLAYYPEPFLTS*FDIIGA Trigger: GGCCCCGATTATATCAAACAAAGATGTCAGGAAGGG...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | TTATCCCACGGACCAGGATATTATTTTTGTATTTTCCCTCTTCTTTaGAGCCATCAGGAAACACAGTGCAGCCGTACCCATGCCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHGPGYYFCIFPLL*SHQETQCSRTHASC Trigger: ACAAGAGGCATGGGTACGGCTGCACTGTGTTTCCTGATGGCTCCAAAGAAGAGGGAAAATACAAAAATAATATCCTGGTCCGTGGGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTCATGGCTGCCGCCCTTaGTGCACCTTCAATTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NETEPVTTDYCNPSNILTHGCRP*CTFNCS Trigger: AGAGCAATTGAAGGTGCACAAAGGGCGGCAGCCATG...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGAACTGTGGGCTAACTCTACTAGTTGTCATGACTTCACTGATGAGTCGTGGCATGTGCAGTCCTaGAGTTTGCTATTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: KAELWANSTSCHDFTDESWHVQS*SLLFPL Trigger: AAGTGGAAATAGCAAACTCAAGGACTGCACATGCCA...CGACTCATCAGTGAAGTCATGACAACTAGTAGAGTTAGCCCACAGTTCTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCAATATATCGCCCTTCTGGAGAAGCCACTGCTGGCTTACTATCCAGAAGCTTTTGGCTCAGTTTaGCTTTCTTTGGCAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSQYIALLEKPLLAYYPEAFGSV*LSLATG Trigger: ACCAGTTGCCAAAGAAAGCAAAACTGAGCCAAAAGC...TTCTGGATAGTAAGCCAGCAGTGGCTTCTCCAGAAGGGCGATATATTGAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | CTTTTCCAGTGTGTTCTCATCCAGCCAGGACTGCAGGTGGAAGATGACATACATCAAGTTCAGACTTCTTaGCTTTTGGCTCAGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFQCVLIQPGLQVEDDIHQVQTS*LLAQFC Trigger: GCAAAACTGAGCCAAAAGCAAAGAAGTCTGAACTTG...ATGTATGTCATCTTCCACCTGCAGTCCTGGCTGGATGAGAACACACTGGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | CACTTTGGTTCTGGCCATGGCTGCCGCCCTTTGTGCACCTTCAATTaGTCTATCCACCTTCTCTCTAGTTTTTGTATTTCTTATTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HFGSGHGCRPLCTFN*SIHLLSSFCISYWY Trigger: ATACCAATAAGAAATACAAAAACTAGAGAGAAGGTGGATAGAGCAATTGAAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 90 bp | GCCAGAGTTGGCTTCTTTTTCCAAGGAAGGGCAGGTATCATTGCTTaGTGGATTCTTTGGTATAGCAAGTTCAGACTTCTTTGCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARVGFFFQGRAGIIA*WILWYSKFRLLCFW Trigger: CCAAAAGCAAAGAAGTCTGAACTTGCTATACCAAAGAATCCAGCAAGCAATGATACCTGCCCTTCCTTGGAAAAAGAAGCCAACTCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038382.5 ENSMUST00000186024.2 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAACGGCAGCATCAGCTTTaGCTCTGGCATGTGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQSHVLLSTLADFTCCPKRQHQL*LWHVQS Trigger: GGACTGCACATGCCAGAGCAAAAGCTGATGCTGCCG...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | TCCCAAAATACTGTCCAGGCAGGTCAAATTGAAGGTCAAAGGTTTTGTGTTTGGGAAGGGCAGGTATCATaGCTTGCTGGATTCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQNTVQAGQIEGQRFCVWEGQVS*LAGFFG Trigger: ACCAAAGAATCCAGCAAGCAATGATACCTGCCCTTC...CCAAACACAAAACCTTTGACCTTCAATTTGACCTGCCTGGACAGTATTTTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS CCA 90 bp | AGAGTTGGCTTCTTTTTCCAAGGAAGGGCAGGTATCATTGCTTGCTaGATTCTTTGGTATAGCAAGTTCAGACTTCTTTGCTTTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVGFFFQGRAGIIAC*ILWYSKFRLLCFWL Trigger: GAGCCAAAAGCAAAGAAGTCTGAACTTGCTATACCAAAGAATCCAGCAAGCAATGATACCTGCCCTTCCTTGGAAAAAGAAGCCAACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038382.5 ENSMUST00000186024.2 |
||
| CDS-3UTR CAA 90 bp | ATCATATTTAAATCAACAGCAGAAATGAGCAGAGTCGTGCACAAGCAAATGAAAGTGTCCGCATGGAAGTaGAGCACGAAGCCACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IIFKSTAEMSRVVHKQMKVSAWK*STKPPL Trigger: AAGAGGTGGCTTCGTGCTCAACTTCCATGCGGACAC...TTTCATTTGCTTGTGCACGACTCTGCTCATTTCTGCTGTTGATTTAAATATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAATCGTACTTCATGCCATaGGAGCGTTCGCTGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KQSHVLLSTLADFTCCPKSYFMP*ERSLMP Trigger: CGGCATCAGCGAACGCTCCAATGGCATGAAGTACGA...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | CCCAAAATACTGTCCAGGCAGGTCAAATTGAAGGTCAAAGGTTTTGTGTTTGGTGCTTTTGGCTCAGTTTaGCTTTCTTTGGCAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PKILSRQVKLKVKGFVFGAFGSV*LSLATG Trigger: ACCAGTTGCCAAAGAAAGCAAAACTGAGCCAAAAGC...ACCAAACACAAAACCTTTGACCTTCAATTTGACCTGCCTGGACAGTATTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAAAATACTGTCCAGGCAGGTCAAATTGAAGGTCAAAGGTTTTGTGTTTGGCAAGTTCAGACTTCTTaGCTTTTGGCTCAGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQNTVQAGQIEGQRFCVWQVQTS*LLAQFC Trigger: GCAAAACTGAGCCAAAAGCAAAGAAGTCTGAACTTG...CCAAACACAAAACCTTTGACCTTCAATTTGACCTGCCTGGACAGTATTTTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000186024.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAATTAATAGAGCCACTGACAAGATTTTATTTGGTTGTAACGTACGTCAGCGAAGGGCAGGTATCATaGCTTGCTGGATTCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WELIEPLTRFYLVVTYVSEGQVS*LAGFFG Trigger: ACCAAAGAATCCAGCAAGCAATGATACCTGCCCTTC...GCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | TGGGAATTAATAGAGCCACTGACAAGATTTTATTTGGTTGTAACGTACGTCAGCTTTGTGCACCTTCAATaGCTCTATCCACCTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WELIEPLTRFYLVVTYVSFVHLQ*LYPPSL Trigger: GAGAGAAGGTGGATAGAGCAATTGAAGGTGCACAAA...GCTGACGTACGTTACAACCAAATAAAATCTTGTCAGTGGCTCTATTAATTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS-3UTR CAA 90 bp | AATGAAACTGAACCCGTAACCACTGATTACTGCAATCCAAGCAACATTTTGACTTATTTTCCCTCTTCTTaGGAGCCATCAGGAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: NETEPVTTDYCNPSNILTYFPSS*EPSGNT Trigger: TGTGTTTCCTGATGGCTCCAAAGAAGAGGGAAAATA...AGTCAAAATGTTGCTTGGATTGCAGTAATCAGTGGTTACGGGTTCAGTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS-3UTR CAA 90 bp | AAACAAAGTCATGTTTTATTAAGTACATTGGCAGACTTCACGTGCTGTCCAAAAGTGCAGTCCTTGAGTTaGCTATTTCCACTTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQSHVLLSTLADFTCCPKVQSLS*LFPLWF Trigger: GAACCAAAGTGGAAATAGCAAACTCAAGGACTGCAC...TTTTGGACAGCACGTGAAGTCTGCCAATGTACTTAATAAAACATGACTTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 90 bp | TTCAATTGCTCTATCCACCTTCTCTCTAGTTTTTGTATTTCTTATTaGTATAAGCTGCTTCCTTATCCCACGGACCAGGATATTATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FNCSIHLLSSFCISY*YKLLPYPTDQDIIF Trigger: AAAAATAATATCCTGGTCCGTGGGATAAGGAAGCAGCTTATACCAATAAGAAATACAAAAACTAGAGAGAAGGTGGATAGAGCAATTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 72 bp | CAGCTGCGGCTGCAGCTTCATGCAGCACGCTGCCGTTaGTCTGCTCACTGCGCAGCGAGGCCAGGGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLRLQLHAARCR*SAHCAARPGKC Trigger: GCACTTCCCTGGCCTCGCTGCGCAGTGAGCAGAGCAACGGCAGCGTGCTGCATGAAGCTGCAGCCGCAGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CAA 72 bp | GCAGCTGCGGCTGCAGCTTCATGCAGCACGCTGCCGTaGCTCTGCTCACTGCGCAGCGAGGCCAGGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAASCSTLP*LCSLRSEAREV Trigger: CACTTCCCTGGCCTCGCTGCGCAGTGAGCAGAGCAACGGCAGCGTGCTGCATGAAGCTGCAGCCGCAGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 72 bp | GAGCACGAAGCCACCTCTTGTTCCAGCCGGGCTGTCTaGAGCTGCGGCTGCAGCTTCATGCAGCACGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EHEATSCSSRAV*SCGCSFMQHAA Trigger: GGCAGCGTGCTGCATGAAGCTGCAGCCGCAGCTGCAGACAGCCCGGCTGGAACAAGAGGTGGCTTCGTGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CAA 90 bp | ATGCTGCCGAGAAGGGAACCCCGACGGAAGAGGCCGCCCTTCTTCTaGCCCAGTTCCGTGTCCGCATGGAAGTTGAGCACGAAGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: MLPRREPRRKRPPFF*PSSVSAWKLSTKPP Trigger: AGGTGGCTTCGTGCTCAACTTCCATGCGGACACGGAACTGGGCAAGAAGAAGGGCGGCCTCTTCCGTCGGGGTTCCCTTCTCGGCAGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 72 bp | AGCTCTCTGGCCACAGCTCTTGCTATGTCGCACTCCTaGCGAGCAGCCAGTGCAGCTTGGTCGGCAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLATALAMSHS*RAASAAWSAAS Trigger: TGATGCTGCCGACCAAGCTGCACTGGCTGCTCGCCAGGAGTGCGACATAGCAAGAGCTGTGGCCAGAGAGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CCA 72 bp | CGTGATACTGAGAGTGCAGCTCCCCGTTGCTGGGGTTaGGGACATGGTGGCGGCCAGAGTACTTGGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: RDTESAAPRCWG*GHGGGQSTWTQ Trigger: CTGTGTCCAAGTACTCTGGCCGCCACCATGTCCCCAACCCCAGCAACGGGGAGCTGCACTCTCAGTATCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038382.5 ENSMUST00000186024.2 |
||
| CDS CCA 72 bp | AGTAGCCGTGATACTGAGAGTGCAGCTCCCCGTTGCTaGGGTTGGGGACATGGTGGCGGCCAGAGTACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRDTESAAPRC*GWGHGGGQSTW Trigger: CCAAGTACTCTGGCCGCCACCATGTCCCCAACCCCAGCAACGGGGAGCTGCACTCTCAGTATCACGGCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038382.5 ENSMUST00000186024.2 |
||
| CDS CAA 72 bp | AGAAGGGAACCCCGACGGAAGAGGCCGCCCTTCTTCTaGCCCAGTTCCGTGTCCGCATGGAAGTTGAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RREPRRKRPPFF*PSSVSAWKLST Trigger: CGTGCTCAACTTCCATGCGGACACGGAACTGGGCAAGAAGAAGGGCGGCCTCTTCCGTCGGGGTTCCCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CAA 90 bp | AAGAGGCCGCCCTTCTTCTTGCCCAGTTCCGTGTCCGCATGGAAGTaGAGCACGAAGCCACCTCTTGTTCCAGCCGGGCTGTCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KRPPFFLPSSVSAWK*STKPPLVPAGLSAA Trigger: AGCTGCAGACAGCCCGGCTGGAACAAGAGGTGGCTTCGTGCTCAACTTCCATGCGGACACGGAACTGGGCAAGAAGAAGGGCGGCCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CAA 90 bp | CGGACCGAGCTGCGCTTGCTGGAGATGGAAGACTTGGATTCGGACTaGCGGAGTTTCATGCTGCCGAGAAGGGAACCCCGACGGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTELRLLEMEDLDSD*RSFMLPRREPRRKR Trigger: CCTCTTCCGTCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 72 bp | TGGAAGACTTGGATTCGGACTTGCGGAGTTTCATGCTaGCGAGAAGGGAACCCCGACGGAAGAGGCCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WKTWIRTCGVSC*REGNPDGRGRP Trigger: AGGGCGGCCTCTTCCGTCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 72 bp | AGCTCTTGCTATGTCGCACTCCTGGCGAGCAGCCAGTaGAGCTTGGTCGGCAGCATCAGCTTTTGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCYVALLASSQ*SLVGSISFCSG Trigger: GCCAGAGCAAAAGCTGATGCTGCCGACCAAGCTGCACTGGCTGCTCGCCAGGAGTGCGACATAGCAAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 72 bp | CGGGGCCTGGTTGGTAGAAATCAGGTGACAGCTCTCTaGCCACAGCTCTTGCTATGTCGCACTCCTGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RGLVGRNQVTAL*PQLLLCRTPGE Trigger: CTCGCCAGGAGTGCGACATAGCAAGAGCTGTGGCCAGAGAGCTGTCACCTGATTTCTACCAACCAGGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CAA 72 bp | CTGCTCATGGCTGCATCACTGCGGACCGAGCTGCGCTaGCTGGAGATGGAAGACTTGGATTCGGACTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLMAASLRTELR*LEMEDLDSDLR Trigger: CCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAGCCATGAGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CAA 72 bp | TGCTATGTCGCACTCCTGGCGAGCAGCCAGTGCAGCTaGGTCGGCAGCATCAGCTTTTGCTCTGGCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CYVALLASSQCS*VGSISFCSGMC Trigger: GCACATGCCAGAGCAAAAGCTGATGCTGCCGACCAAGCTGCACTGGCTGCTCGCCAGGAGTGCGACATAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CAA 90 bp | GCTGCATCACTGCGGACCGAGCTGCGCTTGCTGGAGATGGAAGACTaGGATTCGGACTTGCGGAGTTTCATGCTGCCGAGAAGGGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: AASLRTELRLLEMED*DSDLRSFMLPRREP Trigger: GGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 72 bp | AGATGGAAGACTTGGATTCGGACTTGCGGAGTTTCATaGTGCCGAGAAGGGAACCCCGACGGAAGAGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RWKTWIRTCGVS*CREGNPDGRGR Trigger: GCGGCCTCTTCCGTCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 72 bp | TGCTCATGGCTGCATCACTGCGGACCGAGCTGCGCTTaGTGGAGATGGAAGACTTGGATTCGGACTTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: CSWLHHCGPSCA*WRWKTWIRTCG Trigger: TCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAGCCATGAGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CAA 72 bp | CTGCGGACCGAGCTGCGCTTGCTGGAGATGGAAGACTaGGATTCGGACTTGCGGAGTTTCATGCTGCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRTELRLLEMED*DSDLRSFMLPR Trigger: TCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 72 bp | TGCGCTTGCTGGAGATGGAAGACTTGGATTCGGACTTaGGGAGTTTCATGCTGCCGAGAAGGGAACCCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: CACWRWKTWIRT*GVSCCREGNPD Trigger: GTCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS GCA 72 bp | GGAGTTGGCATCGCTAGAACTGATTCTGCTCATGGCTaGATCACTGCGGACCGAGCTGCGCTTGCTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GVGIARTDSAHG*ITADRAALAGD Trigger: ATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAGCCATGAGCAGAATCAGTTCTAGCGATGCCAACTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 72 bp | TGCGGACCGAGCTGCGCTTGCTGGAGATGGAAGACTTaGATTCGGACTTGCGGAGTTTCATGCTGCCGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CGPSCACWRWKT*IRTCGVSCCRE Trigger: TTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
||
| CDS CCA 72 bp | TCATGGCTGCATCACTGCGGACCGAGCTGCGCTTGCTaGAGATGGAAGACTTGGATTCGGACTTGCGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: SWLHHCGPSCAC*RWKTWIRTCGV Trigger: AACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAGCCATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 72 bp | CTGCGCTTGCTGGAGATGGAAGACTTGGATTCGGACTaGCGGAGTTTCATGCTGCCGAGAAGGGAACCCCGA | + |
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Preference number: 6 (lower is better) Translates to: LRLLEMEDLDSD*RSFMLPRREPR Trigger: TCGGGGTTCCCTTCTCGGCAGCATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 90 bp | GAACTGATTCTGCTCATGGCTGCATCACTGCGGACCGAGCTGCGCTaGCTGGAGATGGAAGACTTGGATTCGGACTTGCGGAGTTTCATG | + |
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Preference number: 6 (lower is better) Translates to: ELILLMAASLRTELR*LEMEDLDSDLRSFM Trigger: CATGAAACTCCGCAAGTCCGAATCCAAGTCTTCCATCTCCAGCAAGCGCAGCTCGGTCCGCAGTGATGCAGCCATGAGCAGAATCAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 90 bp | ACGGGGCAAAAATCACAGTCGACGTCACCAAAGCTGATGGTGGAGTaGGCATCGCTAGAACTGATTCTGCTCATGGCTGCATCACTGCGG | + |
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Preference number: 6 (lower is better) Translates to: TGQKSQSTSPKLMVE*ASLELILLMAASLR Trigger: CCGCAGTGATGCAGCCATGAGCAGAATCAGTTCTAGCGATGCCAACTCCACCATCAGCTTTGGTGACGTCGACTGTGATTTTTGCCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CCA 72 bp | TGGCATGTGCAGTCCTTGAGTTTGCTATTTCCACTTTaGTTCTGGCCATGGCTGCCGCCCTTTGTGCACCTT | + |
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Preference number: 6 (lower is better) Translates to: WHVQSLSLLFPL*FWPWLPPFVHL Trigger: AAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAGTGGAAATAGCAAACTCAAGGACTGCACATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 72 bp | GAGCAGCCAGTGCAGCTTGGTCGGCAGCATCAGCTTTaGCTCTGGCATGTGCAGTCCTTGAGTTTGCTATTT | + |
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Preference number: 6 (lower is better) Translates to: EQPVQLGRQHQL*LWHVQSLSLLF Trigger: AAATAGCAAACTCAAGGACTGCACATGCCAGAGCAAAAGCTGATGCTGCCGACCAAGCTGCACTGGCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 90 bp | GCTTTTGCTCTGGCATGTGCAGTCCTTGAGTTTGCTATTTCCACTTaGGTTCTGGCCATGGCTGCCGCCCTTTGTGCACCTTCAATTGCT | + |
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Preference number: 6 (lower is better) Translates to: AFALACAVLEFAIST*VLAMAAALCAPSIA Trigger: AGCAATTGAAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAGTGGAAATAGCAAACTCAAGGACTGCACATGCCAGAGCAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CCA 72 bp | GTGCAGTCCTTGAGTTTGCTATTTCCACTTTGGTTCTaGCCATGGCTGCCGCCCTTTGTGCACCTTCAATTG | + |
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Preference number: 6 (lower is better) Translates to: VQSLSLLFPLWF*PWLPPFVHLQL Trigger: CAATTGAAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAGTGGAAATAGCAAACTCAAGGACTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CCA 72 bp | CCAGTGCAGCTTGGTCGGCAGCATCAGCTTTTGCTCTaGCATGTGCAGTCCTTGAGTTTGCTATTTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: PVQLGRQHQLLL*HVQSLSLLFPL Trigger: AAGTGGAAATAGCAAACTCAAGGACTGCACATGCCAGAGCAAAAGCTGATGCTGCCGACCAAGCTGCACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CCA 72 bp | TTAGGTGATGGTCTAGGTACCAATGCTGAGGAAGACTaGCTGACTCCTCTGTCATCCTCCCTGTCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LGDGLGTNAEED*LTPLSSSLSSG Trigger: TCCAGAAGACAGGGAGGATGACAGAGGAGTCAGCCAGTCTTCCTCAGCATTGGTACCTAGACCATCACCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038382.5 ENSMUST00000186024.2 |
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| CDS GCA 72 bp | ATTTTCCCTCTTCTTTGGAGCCATCAGGAAACACAGTaGAGCCGTACCCATGCCTCTTGTTATTGGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: IFPLLWSHQETQ*SRTHASCYWPT Trigger: AGTGGGCCAATAACAAGAGGCATGGGTACGGCTGCACTGTGTTTCCTGATGGCTCCAAAGAAGAGGGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 72 bp | AAATCACAGTCGACGTCACCAAAGCTGATGGTGGAGTaGGCATCGCTAGAACTGATTCTGCTCATGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KSQSTSPKLMVE*ASLELILLMAA Trigger: TGCAGCCATGAGCAGAATCAGTTCTAGCGATGCCAACTCCACCATCAGCTTTGGTGACGTCGACTGTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CCA 72 bp | TCCTTGAGTTTGCTATTTCCACTTTGGTTCTGGCCATaGCTGCCGCCCTTTGTGCACCTTCAATTGCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: SLSLLFPLWFWP*LPPFVHLQLLY Trigger: ATAGAGCAATTGAAGGTGCACAAAGGGCGGCAGCCATGGCCAGAACCAAAGTGGAAATAGCAAACTCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 90 bp | CTTATCCCACGGACCAGGATATTATTTTTGTATTTTCCCTCTTCTTaGGAGCCATCAGGAAACACAGTGCAGCCGTACCCATGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LIPRTRILFLYFPSS*EPSGNTVQPYPCLL Trigger: CAAGAGGCATGGGTACGGCTGCACTGTGTTTCCTGATGGCTCCAAAGAAGAGGGAAAATACAAAAATAATATCCTGGTCCGTGGGATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS TCA 72 bp | GGACACAGATGCTCCCAATTCTTTTGCGGGAGCCTTTaGCATAGAGGGTTTATTGACAAAGGCTGTCACTTG | + |
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Preference number: 6 (lower is better) Translates to: GHRCSQFFCGSL*HRGFIDKGCHL Trigger: CAAGTGACAGCCTTTGTCAATAAACCCTCTATGTCAAAGGCTCCCGCAAAAGAATTGGGAGCATCTGTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS GCA 72 bp | TCTGGCCATGGCTGCCGCCCTTTGTGCACCTTCAATTaGTCTATCCACCTTCTCTCTAGTTTTTGTATTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGHGCRPLCTFN*SIHLLSSFCIS Trigger: AGAAATACAAAAACTAGAGAGAAGGTGGATAGAGCAATTGAAGGTGCACAAAGGGCGGCAGCCATGGCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 90 bp | GATGCTCCCAATTCTTTTGCGGGAGCCTTTGACATAGAGGGTTTATaGACAAAGGCTGTCACTTGTTCCTCAGCTAGGCTCTGTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: DAPNSFAGAFDIEGL*TKAVTCSSARLCLS Trigger: AGATAAACAGAGCCTAGCTGAGGAACAAGTGACAGCCTTTGTCAATAAACCCTCTATGTCAAAGGCTCCCGCAAAAGAATTGGGAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS CAA 72 bp | AATTCTTTTGCGGGAGCCTTTGACATAGAGGGTTTATaGACAAAGGCTGTCACTTGTTCCTCAGCTAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: NSFAGAFDIEGL*TKAVTCSSARL Trigger: GAGCCTAGCTGAGGAACAAGTGACAGCCTTTGTCAATAAACCCTCTATGTCAAAGGCTCCCGCAAAAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038382.5 |
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| CDS GCA 72 bp | GGCTTCTTTTTCCAAGGAAGGGCAGGTATCATTGCTTaGTGGATTCTTTGGTATAGCAAGTTCAGACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GFFFQGRAGIIA*WILWYSKFRLL Trigger: AAGAAGTCTGAACTTGCTATACCAAAGAATCCAGCAAGCAATGATACCTGCCCTTCCTTGGAAAAAGAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038382.5 ENSMUST00000186024.2 |
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| CDS CCA 72 bp | TTCTTTTTCCAAGGAAGGGCAGGTATCATTGCTTGCTaGATTCTTTGGTATAGCAAGTTCAGACTTCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: FFFQGRAGIIAC*ILWYSKFRLLC Trigger: GCAAAGAAGTCTGAACTTGCTATACCAAAGAATCCAGCAAGCAATGATACCTGCCCTTCCTTGGAAAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038382.5 ENSMUST00000186024.2 |
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