Pregenerated sensors for JOSD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038695Ensembl transcript IDs: ENSMUST00000035844.11, ENSMUST00000117324.8, ENSMUST00000118493.8, ENSMUST00000118628.8, ENSMUST00000120852.8, ENSMUST00000121922.3, ENSMUST00000134398.3, ENSMUST00000136609.8, ENSMUST00000136679.8, ENSMUST00000139097.2, ENSMUST00000206887.2, ENSMUST00000208117.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGGCTTCAGGGGCCCGGAGCTTTGAGTCCAGATTATAGTAGATaGCATCTACCTGTCGCAGGGCCACCCAGTGTCGGCGGCGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: PGLQGPGALSPDYSR*HLPVAGPPSVGGAV Trigger: CACTGCGCCGCCGACACTGGGTGGCCCTGCGACAGGTAGATGGCATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR CCA 90 bp | TCCTCCACCTCCTTGGTCACCACCAATAGCACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGGAAGGTCCTGACTCCATCCTCGTCC | + |
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Preference number: 1 (lower is better) Translates to: SSTSLVTTNSTSHRP*AKAAARKVLTPSSS Trigger: GGACGAGGATGGAGTCAGGACCTTCCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTGCTATTGGTGGTGACCAAGGAGGTGGAGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR TCA 90 bp | GGGTTCAGCCGGGAATCTGGGGCTAGCCTTCAACTTCCAGGAGCCTaGGTTGCCCTGCTCCCTTCCTACTTCCACTTCTCCCGTGACTCC | + |
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Preference number: 1 (lower is better) Translates to: GFSRESGASLQLPGA*VALLPSYFHFSRDS Trigger: GGAGTCACGGGAGAAGTGGAAGTAGGAAGGGAGCAGGGCAACTCAGGCTCCTGGAAGTTGAAGGCTAGCCCCAGATTCCCGGCTGAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR TCA 90 bp | ACAGCAGTTGATGGAGTGCTGGGGATGGAATCCTGGCCTCATATGTaGCGGGGAAGCCTTCTCCTCCTGTCCCACCACACAGCGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TAVDGVLGMESWPHM*RGSLLLLSHHTAAR Trigger: CCTGGCCGCTGTGTGGTGGGACAGGAGGAGAAGGCTTCCCCGTCACATATGAGGCCAGGATTCCATCCCCAGCACTCCATCAACTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR TCA 90 bp | CCTGACTCCATCCTCGTCCCCCAGGGCTTCAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGATGCCATCTACCTGTCGCAGGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PDSILVPQGFRGPEL*VQIIVDAIYLSQGH Trigger: GTGGCCCTGCGACAGGTAGATGGCATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGGGGGACGAGGATGGAGTCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR TCA 90 bp | AGGAGCCTGAGTTGCCCTGCTCCCTTCCTACTTCCACTTCTCCCGTaGCTCCCAAGTGCTCTGGACAAAGTCCCTGCCCCTCCATTCTTC | + |
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Preference number: 1 (lower is better) Translates to: RSLSCPAPFLLPLLP*LPSALDKVPAPPFF Trigger: GAAGAATGGAGGGGCAGGGACTTTGTCCAGAGCACTTGGGAGTCACGGGAGAAGTGGAAGTAGGAAGGGAGCAGGGCAACTCAGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR GCA 90 bp | ACTTCCACTTCTCCCGTGACTCCCAAGTGCTCTGGACAAAGTCCCTaGCCCTCCATTCTTCCCACTCGTCACGGTCTCTCTCCAGACCAG | + |
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Preference number: 1 (lower is better) Translates to: TSTSPVTPKCSGQSP*PSILPTRHGLSPDQ Trigger: CTGGTCTGGAGAGAGACCGTGACGAGTGGGAAGAATGGAGGGGCAGGGACTTTGTCCAGAGCACTTGGGAGTCACGGGAGAAGTGGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR GCA 90 bp | TTGCCCTGCTCCCTTCCTACTTCCACTTCTCCCGTGACTCCCAAGTaGTCTGGACAAAGTCCCTGCCCCTCCATTCTTCCCACTCGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: LPCSLPTSTSPVTPK*SGQSPCPSILPTRH Trigger: GTGACGAGTGGGAAGAATGGAGGGGCAGGGACTTTGTCCAGAGCACTTGGGAGTCACGGGAGAAGTGGAAGTAGGAAGGGAGCAGGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR GCA 90 bp | GGGAATCTGGGGCTAGCCTTCAACTTCCAGGAGCCTGAGTTGCCCTaGTCCCTTCCTACTTCCACTTCTCCCGTGACTCCCAAGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GNLGLAFNFQEPELP*SLPTSTSPVTPKCS Trigger: AGAGCACTTGGGAGTCACGGGAGAAGTGGAAGTAGGAAGGGAGCAGGGCAACTCAGGCTCCTGGAAGTTGAAGGCTAGCCCCAGATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR CCA 90 bp | CTGCTCCCTTCCTACTTCCACTTCTCCCGTGACTCCCAAGTGCTCTaGACAAAGTCCCTGCCCCTCCATTCTTCCCACTCGTCACGGTCT | + |
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Preference number: 1 (lower is better) Translates to: LLPSYFHFSRDSQVL*TKSLPLHSSHSSRS Trigger: AGACCGTGACGAGTGGGAAGAATGGAGGGGCAGGGACTTTGTCCAGAGCACTTGGGAGTCACGGGAGAAGTGGAAGTAGGAAGGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR TCA 90 bp | TTAGGCAGGGTCTCGGGTATCCCAGATGTGCACCACTACAGCAGTTaGTGGAGTGCTGGGGATGGAATCCTGGCCTCATATGTGACGGGG | + |
|
Preference number: 1 (lower is better) Translates to: LGRVSGIPDVHHYSS*WSAGDGILASYVTG Trigger: CCCCGTCACATATGAGGCCAGGATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCCGAGACCCTGCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR CCA 90 bp | GAGGGTAGGTTCAAGATCAGGCCTAGTACCTGGGGCAGGGCCAGCTaGGACAGGGGTCCTCTTATCTGTCAACTCCAGCTTTGGTTTGTT | + |
|
Preference number: 1 (lower is better) Translates to: EGRFKIRPSTWGRAS*DRGPLICQLQLWFV Trigger: AACAAACCAAAGCTGGAGTTGACAGATAAGAGGACCCCTGTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAACCTACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136609.8 |
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| 3UTR TCA 90 bp | CCTGACTCCATCCTCGTCCCCCAGGGCTTCAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGATGCCATCTACCCTCTTATCTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: PDSILVPQGFRGPEL*VQIIVDAIYPLICQ Trigger: TTGACAGATAAGAGGGTAGATGGCATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGGGGGACGAGGATGGAGTCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139097.2 |
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| 3UTR TCA 90 bp | GTTGCGGGCCACAGAGGCACTTGGATCCTGCTTCCTTCTCCAGAATaGGCGTCTATTCACTCACTGACCCATTACCCTCTTATCTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: VAGHRGTWILLPSPE*ASIHSLTHYPLICQ Trigger: TTGACAGATAAGAGGGTAATGGGTCAGTGAGTGAATAGACGCTCATTCTGGAGAAGGAAGCAGGATCCAAGTGCCTCTGTGGCCCGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGGACCCTAGGGCAGGGTaGAGGCCTCCTGAGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWDPRAG*RPPEAW Trigger: CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTC...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCCACGACCCTAGGGCAGGGTaGAGGCCTCCTGAGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VGAGSRSACVQPAAGLLHDPRAG*RPPEAW Trigger: CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTC...GTGGAGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGGGCCCTTCCAGGCACTaGACACTTAGGACTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWGPSRH*TLRTVG Trigger: TCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCC...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCAGGCCTCCTGAGGCCTaGAGCTGCAGGCCCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GLWEQAADQLVFSQQPASRPPEA*SCRPFQ Trigger: CTGGAAGGGCCTGCAGCTCCAGGCCTCAGGAGGCCT...GGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GLWEQAADQLVFSQQPASTSHRP*AKAAAR Trigger: CCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGT...GGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTGGTCACCACCAATAGCACCTCGCACAGGCCTTGGGCCAAGGCAGCTGCCCCTGAGGCCTGGAGCTaGAGGCCCTTCCAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: SLVTTNSTSHRPWAKAAAPEAWS*RPFQAL Trigger: CAGTGCCTGGAAGGGCCTGCAGCTCCAGGCCTCAGG...GGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTGCTATTGGTGGTGACCAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCCACCTCCTTGGTCAGGCCTCCTGAGGCCTaGAGCTGCAGGCCCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: AADQLVFSQQPASSTSLVRPPEA*SCRPFQ Trigger: CTGGAAGGGCCTGCAGCTCCAGGCCTCAGGAGGCCT...GACCAAGGAGGTGGAGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCCAGGAGCCTGAGTTaGCCTGCTCCCTTCCTACTT | + |
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Preference number: 2 (lower is better) Translates to: GLWEQAADQLVFSQQPASSRSLS*PAPFLL Trigger: AAGTAGGAAGGGAGCAGGGCAACTCAGGCTCCTGGA...GGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCACCACTACAGCAGTTaGTGGAGTGCTGGGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: DCGSRQQISLCSASSRPPHHYSS*WSAGDG Trigger: TCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTG...AGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTGGTCACCACCAATAGCACCTCGCACAGGCCTTGGGCCAAGGCAGCTGCCCAGCAGTTGATGGAGTaGTGGGGATGGAATCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SLVTTNSTSHRPWAKAAAQQLME*WGWNPG Trigger: GCCAGGATTCCATCCCCAGCACTCCATCAACTGCTG...GGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTGCTATTGGTGGTGACCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCTGGACAAAGTCCCTaGCCCTCCATTCTTCCCACT | + |
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Preference number: 2 (lower is better) Translates to: GLWEQAADQLVFSQQPASSGQSP*PSILPT Trigger: AGTGGGAAGAATGGAGGGGCAGGGACTTTGTCCAGA...GGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCCACAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: VGAGSRSACVQPAAGLLHRGPEL*VQIIVD Trigger: ATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCT...GTGGAGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCTCGTCCCCCAGGGCTTCAGGGGCCCGGAGCTTTGAGTCCAGATTATAGTCTTCCACTTCTCCCGTaGCTCCCAAGTGCTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: HPRPPGLQGPGALSPDYSLPLLP*LPSALD Trigger: GTCCAGAGCACTTGGGAGTCACGGGAGAAGTGGAAG...ACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGGGGGACGAGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR-3UTR GCA 90 bp | GGACACTTAGGACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGTTGGGCCAAGGCAGCTaGCAGGAAGGTCCTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GHLGLWEQAADQLVFSQQLGQGS*QEGPDS Trigger: GGAGTCAGGACCTTCCTGGCAGCTGCCTTGGCCCAA...CTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTCCTAAGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCACCACTACAGCAGTTGATGGAGTGCTGGGGATGGAATCCTGGCCTCATCGGTGCCCAAGAGACTaGGATGGGGGTTCAGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: MCTTTAVDGVLGMESWPHRCPRD*DGGSAG Trigger: CCCGGCTGAACCCCCATCGCAGTCTCTTGGGCACCG...ATGAGGCCAGGATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR-3UTR CCA 90 bp | CATCCTCGTCCCCCAGGGCTTCAGGGGCCCGGAGCTTTGAGTCCAGATTATAGTGGCCCTTCCAGGCACTaGACACTTAGGACTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: HPRPPGLQGPGALSPDYSGPSRH*TLRTVG Trigger: TCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCC...ACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGGGGGACGAGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCCACCTCCTTGGTAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: GSRSACVQPAAGLLHLLGRGPEL*VQIIVD Trigger: ATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCT...ACCAAGGAGGTGGAGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTTAGGACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCCCCAAGAGACTGCGATaGGGGTTCAGCCGGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: TLRTVGAGSRSACVQPAAPKRLR*GFSRES Trigger: AGATTCCCGGCTGAACCCCCATCGCAGTCTCTTGGG...GGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTCCTAAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR CAA 90 bp | CAGGGCCAGCTGGGACAGGGGTCCTCTTATCTGTCAACTCCAGCTTaGGTTTGTTTAGGCAGGGTCTCGGGTATCCCAGATGTGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: QGQLGQGSSYLSTPA*VCLGRVSGIPDVHH Trigger: GTGGTGCACATCTGGGATACCCGAGACCCTGCCTAAACAAACCAAAGCTGGAGTTGACAGATAAGAGGACCCCTGTCCCAGCTGGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136609.8 |
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| 3UTR CAA 90 bp | TTTAGGCAGGGTCTCGGGTATCCCAGATGTGCACCACTACAGCAGTaGATGGAGTGCTGGGGATGGAATCCTGGCCTCATATGTGACGGG | + |
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Preference number: 2 (lower is better) Translates to: FRQGLGYPRCAPLQQ*MECWGWNPGLICDG Trigger: CCCGTCACATATGAGGCCAGGATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCCGAGACCCTGCCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR CAA 90 bp | CCAGCTGGGACAGGGGTCCTCTTATCTGTCAACTCCAGCTTTGGTTaGTTTAGGCAGGGTCTCGGGTATCCCAGATGTGCACCACTACAG | + |
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Preference number: 2 (lower is better) Translates to: PAGTGVLLSVNSSFG*FRQGLGYPRCAPLQ Trigger: CTGTAGTGGTGCACATCTGGGATACCCGAGACCCTGCCTAAACAAACCAAAGCTGGAGTTGACAGATAAGAGGACCCCTGTCCCAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136609.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCAGCTGGGACAGGGGTCCTCTTATCTGTCAACTCCAGCTTTGGTTTGTTCAGCAGTTGATGGAGTaGTGGGGATGGAATCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RASWDRGPLICQLQLWFVQQLME*WGWNPG Trigger: GCCAGGATTCCATCCCCAGCACTCCATCAACTGCTG...AACAAACCAAAGCTGGAGTTGACAGATAAGAGGACCCCTGTCCCAGCTGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136609.8 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCCACCTCCCACCTCGCACAGGCCTaGGGCCAAGGCAGCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: EQAADQLVFSQQPASSTSHLAQA*GQGSCQ Trigger: CTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTG...GGAGGTGGAGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGCAGGGGCCCGGAGCTTaGAGTCCAGATTATAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWQGPGA*SPDYSR Trigger: TCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTG...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR CCA 72 bp | TCCTTGGTCACCACCAATAGCACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGGAAGGTCCTGACTCCA | + |
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Preference number: 3 (lower is better) Translates to: SLVTTNSTSHRP*AKAAARKVLTP Trigger: TGGAGTCAGGACCTTCCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTGCTATTGGTGGTGACCAAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCCACCTCCAACTCCAGCTTTGGTTaGTTTAGGCAGGGTCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: EQAADQLVFSQQPASSTSNSSFG*FRQGLG Trigger: CCCGAGACCCTGCCTAAACAAACCAAAGCTGGAGTT...GGAGGTGGAGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGGTAGGTTCAAGATCAGGCCTAGTACCTGGGGCAGGGCCAGCTGGGACAGGCTGTCAACTCCAGCTTaGGTTTGTTTAGGCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: EGRFKIRPSTWGRASWDRLSTPA*VCLGRV Trigger: GACCCTGCCTAAACAAACCAAAGCTGGAGTTGACAG...CCTGTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAACCTACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000136679.8 |
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| 3UTR TCA 72 bp | AGTTGCCCTGCTCCCTTCCTACTTCCACTTCTCCCGTaGCTCCCAAGTGCTCTGGACAAAGTCCCTGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: SCPAPFLLPLLP*LPSALDKVPAP Trigger: AGGGGCAGGGACTTTGTCCAGAGCACTTGGGAGTCACGGGAGAAGTGGAAGTAGGAAGGGAGCAGGGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR TCA 72 bp | CGGGAATCTGGGGCTAGCCTTCAACTTCCAGGAGCCTaGGTTGCCCTGCTCCCTTCCTACTTCCACTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: RESGASLQLPGA*VALLPSYFHFS Trigger: GGAGAAGTGGAAGTAGGAAGGGAGCAGGGCAACTCAGGCTCCTGGAAGTTGAAGGCTAGCCCCAGATTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR TCA 72 bp | GATGGAGTGCTGGGGATGGAATCCTGGCCTCATATGTaGCGGGGAAGCCTTCTCCTCCTGTCCCACCACACA | + |
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Preference number: 3 (lower is better) Translates to: DGVLGMESWPHM*RGSLLLLSHHT Trigger: TGTGTGGTGGGACAGGAGGAGAAGGCTTCCCCGTCACATATGAGGCCAGGATTCCATCCCCAGCACTCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR GCA 72 bp | TCTCCCGTGACTCCCAAGTGCTCTGGACAAAGTCCCTaGCCCTCCATTCTTCCCACTCGTCACGGTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SPVTPKCSGQSP*PSILPTRHGLS Trigger: AGAGAGACCGTGACGAGTGGGAAGAATGGAGGGGCAGGGACTTTGTCCAGAGCACTTGGGAGTCACGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| 3UTR-3UTR CAA 90 bp | GACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTAAAAGAGCAGATTTATaGAGGCAGCAGTGGTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DCGSRQQISLCSASSRPPKRADL*RQQWLG Trigger: CCCCAACCACTGCTGCCTCAATAAATCTGCTCTTTT...AGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| 3UTR TCA 72 bp | ATCCTCGTCCCCCAGGGCTTCAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGATGCCATCTACCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: ILVPQGFRGPEL*VQIIVDAIYLS Trigger: CGACAGGTAGATGGCATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGGGGGACGAGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| 3UTR CCA 72 bp | TTCAAGATCAGGCCTAGTACCTGGGGCAGGGCCAGCTaGGACAGGGGTCCTCTTATCTGTCAACTCCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FKIRPSTWGRAS*DRGPLICQLQL Trigger: AAGCTGGAGTTGACAGATAAGAGGACCCCTGTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136609.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTTAGGACTGTGGGAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGCTGTCAACTCCAGCTTaGGTTTGTTTAGGCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HLGLWEQAADQLVFSQQPLSTPA*VCLGRV Trigger: GACCCTGCCTAAACAAACCAAAGCTGGAGTTGACAG...CGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTCCCACAGTCCTAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
||
| 3UTR TCA 72 bp | ATCCTCGTCCCCCAGGGCTTCAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGATGCCATCTACCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ILVPQGFRGPEL*VQIIVDAIYPL Trigger: AAGAGGGTAGATGGCATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGGGGGACGAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139097.2 |
||
| 3UTR CCA 72 bp | TGTGCACCACTACAGCAGTTGATGGAGTGCTGGGGATaGAATCCTGGCCTCATATGTGACGGGGAAGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CAPLQQLMECWG*NPGLICDGEAF Trigger: GAAGGCTTCCCCGTCACATATGAGGCCAGGATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| 3UTR TCA 72 bp | GTCTCGGGTATCCCAGATGTGCACCACTACAGCAGTTaGTGGAGTGCTGGGGATGGAATCCTGGCCTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: VSGIPDVHHYSS*WSAGDGILASY Trigger: ATATGAGGCCAGGATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCCGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| 3UTR GCA 72 bp | TATCCCAGATGTGCACCACTACAGCAGTTGATGGAGTaGTGGGGATGGAATCCTGGCCTCATATGTGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: YPRCAPLQQLME*WGWNPGLICDG Trigger: CCCGTCACATATGAGGCCAGGATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| 3UTR TCA 72 bp | TGCTTCCTTCTCCAGAATGAGCGTCTATTCACTCACTaGCCCATTACCCTCTTATCTGTCAACTCCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CFLLQNERLFTH*PITLLSVNSSF Trigger: AAAGCTGGAGTTGACAGATAAGAGGGTAATGGGTCAGTGAGTGAATAGACGCTCATTCTGGAGAAGGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGAGTGTCGGCGGCGCAGTaGCAGGGACAGCAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVGGVGTLGQGAGLLRPGVSAAQ*QGQQPQ Trigger: CTGGGGCTGCTGTCCCTGCCACTGCGCCGCCGACAC...TCCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGGCCAGGCCCAGGCCCTaGAGGGCAGCCATGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWARPRP*RAAMIT Trigger: CGTGATCATGGCTGCCCTGCAGGGCCTGGGCCTGGC...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGACGGTGCCCAAGAGACTaGGATGGGGGTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVGGVGTLGQGAGLLRPGRCPRD*DGGSAG Trigger: CCCGGCTGAACCCCCATCGCAGTCTCTTGGGCACCG...TCCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGCGGTGCCCAAGAGACTaGGATGGGGGTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWRCPRD*DGGSAG Trigger: CCCGGCTGAACCCCCATCGCAGTCTCTTGGGCACCG...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWTSHRP*AKAAAR Trigger: CCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGT...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGATCAGGCCTAGTACCTaGGGCAGGGCCAGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWIRPST*GRASWD Trigger: GTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGAT...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCGCCAGGCCCAGGCCCTaGAGGGCAGCCATGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGARPRP*RAAMIT Trigger: CGTGATCATGGCTGCCCTGCAGGGCCTGGGCCTGGC...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCGCCAGGCCCAGGCCCTaGAGGGCAGCCATGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSARPRP*RAAMIT Trigger: CGTGATCATGGCTGCCCTGCAGGGCCTGGGCCTGGC...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGTTGGGCCAAGGCAGCTaGCAGGAAGGTCCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWLGQGS*QEGPDS Trigger: GGAGTCAGGACCTTCCTGGCAGCTGCCTTGGCCCAA...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGTTGGGCCAAGGCAGCTaGCAGGAAGGTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWLGQGS*QEGPPP Trigger: AGGAGGAGGACCTTCCTGGCAGCTGCCTTGGCCCAA...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGTGTCGGCGGCGCAGTaGCAGGGACAGCAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LELQALPGTGHLGLWEQAVSAAQ*QGQQPQ Trigger: CTGGGGCTGCTGTCCCTGCCACTGCGCCGCCGACAC...TGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGAGTGTCGGCGGCGCAGTaGCAGGGACAGCAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRVSAAQ*QGQQPQ Trigger: CTGGGGCTGCTGTCCCTGCCACTGCGCCGCCGACAC...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCCGGTGCCCAAGAGACTaGGATGGGGGTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGRCPRD*DGGSAG Trigger: CCCGGCTGAACCCCCATCGCAGTCTCTTGGGCACCG...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCCGGTGCCCAAGAGACTaGGATGGGGGTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSRCPRD*DGGSAG Trigger: CCCGGCTGAACCCCCATCGCAGTCTCTTGGGCACCG...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCCAGGCCCAGGCCCTaGAGGGCAGCCATGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: LELQALPGTGHLGLWEQAARPRP*RAAMIT Trigger: CGTGATCATGGCTGCCCTGCAGGGCCTGGGCCTGGC...TGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGAGCCAGGCCCAGGCCCTaGAGGGCAGCCATGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRARPRP*RAAMIT Trigger: CGTGATCATGGCTGCCCTGCAGGGCCTGGGCCTGGC...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGCCCAAGAGACTGCGATaGGGGTTCAGCCGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWPKRLR*GFSRES Trigger: AGATTCCCGGCTGAACCCCCATCGCAGTCTCTTGGG...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGTSHRP*AKAAAR Trigger: CCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGT...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCTGGGGCAGGGCCAGCTaGGACAGGGGTCTCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSWGRAS*DRGLLQ Trigger: CTGCAAGAGACCCCTGTCCCAGCTGGCCCTGCCCCA...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121922.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGCATCATAGTTGCCGGTaGCCAAGAGACTGCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWHHSCR*PRDCDG Trigger: CCCATCGCAGTCTCTTGGGCACCGGCAACTATGATG...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCATCAGGCCTAGTACCTaGGGCAGGGCCAGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSIRPST*GRASWD Trigger: GTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGAT...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LELQALPGTGHLGLWEQATSHRP*AKAAAR Trigger: CCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGT...TGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGAACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRTSHRP*AKAAAR Trigger: CCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGT...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCTTGGGCCAAGGCAGCTaGCAGGAAGGTCCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSLGQGS*QEGPDS Trigger: GGAGTCAGGACCTTCCTGGCAGCTGCCTTGGCCCAA...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCTTGGGCCAAGGCAGCTaGCAGGAAGGTCCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGLGQGS*QEGPDS Trigger: GGAGTCAGGACCTTCCTGGCAGCTGCCTTGGCCCAA...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGAATCAGGCCTAGTACCTaGGGCAGGGCCAGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRIRPST*GRASWD Trigger: GTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGAT...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAATCAGGCCTAGTACCTaGGGCAGGGCCAGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LELQALPGTGHLGLWEQAIRPST*GRASWD Trigger: GTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGAT...TGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR TCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGCTTGAAGGACGTTGTTaGGAGCATGGACAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWLEGRC*EHGQHT Trigger: TGTGTGCTGTCCATGCTCTCAACAACGTCCTTCAAG...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTCTTGAAGGACGTTGTTaGGAGCATGGACAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: AVVGGVGTLGQGAGLLRPLEGRC*EHGQHT Trigger: TGTGTGCTGTCCATGCTCTCAACAACGTCCTTCAAG...AGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWRGPEL*VQIIVD Trigger: ATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCT...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVVGGVGTLGQGAGLLRPRGPEL*VQIIVD Trigger: ATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCT...AGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGAACGTTGTTGAGAGCATaGACAGCACACAGCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVGGVGTLGQGAGLLRPGTLLRA*TAHSSS Trigger: GCTAGAGCTGTGTGCTGTCCATGCTCTCAACAACGT...TCCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTACGTTGTTGAGAGCATaGACAGCACACAGCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVVGGVGTLGQGAGLLRPTLLRA*TAHSSS Trigger: GCTAGAGCTGTGTGCTGTCCATGCTCTCAACAACGT...AGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGACGTTGTTGAGAGCATaGACAGCACACAGCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWTLLRA*TAHSSS Trigger: GCTAGAGCTGTGTGCTGTCCATGCTCTCAACAACGT...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCCCCAAGAGACTGCGATaGGGGTTCAGCCGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSPKRLR*GFSRES Trigger: AGATTCCCGGCTGAACCCCCATCGCAGTCTCTTGGG...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCCCCAAGAGACTGCGATaGGGGTTCAGCCGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGPKRLR*GFSRES Trigger: AGATTCCCGGCTGAACCCCCATCGCAGTCTCTTGGG...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTCTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVVGGVGTLGQGAGLLRPLKSCS*RTLLRA Trigger: TGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAG...AGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGACTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVGGVGTLGQGAGLLRPGLKSCS*RTLLRA Trigger: TGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAG...TCCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTCGGGTATCCCAGATGTGCACCACTACAGCAGTTGATGGAGTGCTGGGGACGGTGCCCAAGAGACTaGGATGGGGGTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGYPRCAPLQQLMECWGRCPRD*DGGSAG Trigger: CCCGGCTGAACCCCCATCGCAGTCTCTTGGGCACCG...TCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCCGAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000139097.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCCATCATAGTTGCCGGTaGCCAAGAGACTGCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGHHSCR*PRDCDG Trigger: CCCATCGCAGTCTCTTGGGCACCGGCAACTATGATG...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCCATCATAGTTGCCGGTaGCCAAGAGACTGCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSHHSCR*PRDCDG Trigger: CCCATCGCAGTCTCTTGGGCACCGGCAACTATGATG...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCATTGGGCCAAGGCAGCTaGCAGGAAGGTCCTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQALPGTGHLGLWEQAALGQGS*QEGPLA Trigger: TGCAAGAGGACCTTCCTGGCAGCTGCCTTGGCCCAA...TGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134398.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGACCCAAGAGACTGCGATaGGGGTTCAGCCGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRPKRLR*GFSRES Trigger: AGATTCCCGGCTGAACCCCCATCGCAGTCTCTTGGG...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCACCCAAGAGACTGCGATaGGGGTTCAGCCGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ELQALPGTGHLGLWEQAAPKRLR*GFSRES Trigger: AGATTCCCGGCTGAACCCCCATCGCAGTCTCTTGGG...TGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCACATCATAGTTGCCGGTaGCCAAGAGACTGCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELQALPGTGHLGLWEQAAHHSCR*PRDCDG Trigger: CCCATCGCAGTCTCTTGGGCACCGGCAACTATGATG...TGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGACCAGGAAGGTCCTCTTaGAGATTTCGTCGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRPGRSS*RFRRQP Trigger: AGGCTGCCGACGAAATCTGCAAGAGGACCTTCCTGG...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134398.3 |
||
| CDS-3UTR GCA 90 bp | TATCCCAGATGTGCACCACTACAGCAGTTGATGGAGTGCTGGGGATGGAATCCTGCCAGGCCCAGGCCCTaGAGGGCAGCCATGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: YPRCAPLQQLMECWGWNPARPRP*RAAMIT Trigger: CGTGATCATGGCTGCCCTGCAGGGCCTGGGCCTGGC...AGGATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000139097.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCACGTTGTTGAGAGCATaGACAGCACACAGCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSTLLRA*TAHSSS Trigger: GCTAGAGCTGTGTGCTGTCCATGCTCTCAACAACGT...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCACTTGAAGGACGTTGTTaGGAGCATGGACAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ELQALPGTGHLGLWEQAALEGRC*EHGQHT Trigger: TGTGTGCTGTCCATGCTCTCAACAACGTCCTTCAAG...TGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGACTTGAAGGACGTTGTTaGGAGCATGGACAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRLEGRC*EHGQHT Trigger: TGTGTGCTGTCCATGCTCTCAACAACGTCCTTCAAG...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCCTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGLKSCS*RTLLRA Trigger: TGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAG...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LELQALPGTGHLGLWEQARGPEL*VQIIVD Trigger: ATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCT...TGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGAAGGGGCCCGGAGCTTTaGGTCCAGATTATAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRRGPEL*VQIIVD Trigger: ATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCT...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
||
| CDS-3UTR GCA 90 bp | GGGTCTCGGGTATCCCAGATGTGCACCACTACAGCAGTTGATGGAGTGCTGGGGCATCATAGTTGCCGGTaGCCAAGAGACTGCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRVSQMCTTTAVDGVLGHHSCR*PRDCDG Trigger: CCCATCGCAGTCTCTTGGGCACCGGCAACTATGATG...CCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCCGAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000139097.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGAACGTTGTTGAGAGCATaGACAGCACACAGCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRTLLRA*TAHSSS Trigger: GCTAGAGCTGTGTGCTGTCCATGCTCTCAACAACGT...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGACTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGPSRHWTLRTVGAGSRLKSCS*RTLLRA Trigger: TGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAG...TCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGTAGGTTCAAGATCAGGCCTAGTACCTGGGGCAGGGCCAGCTGGGACAGGCTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGRFKIRPSTWGRASWDRLKSCS*RTLLRA Trigger: TGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAG...CCTGTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAACCTACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000136679.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGTCACCACCAATAGCACCTCGCACAGGCCTTGGGCCAAGGCAGCTGCCACTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PWSPPIAPRTGLGPRQLPLKSCS*RTLLRA Trigger: TGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAG...TGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTGCTATTGGTGGTGACCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
||
| 3UTR CAA 72 bp | CATCCTCGTCCCCCAGGGCTTCAGGGGCCCGGAGCTTaGAGTCCAGATTATAGTAGATGCCATCTACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPRPPGLQGPGA*SPDYSRCHLPS Trigger: AGAGGGTAGATGGCATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGGGGGACGAGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139097.2 |
||
| 3UTR CAA 72 bp | AATCTGGGGCTAGCCTTCAACTTCCAGGAGCCTGAGTaGCCCTGCTCCCTTCCTACTTCCACTTCTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLGLAFNFQEPE*PCSLPTSTSPV Trigger: CACGGGAGAAGTGGAAGTAGGAAGGGAGCAGGGCAACTCAGGCTCCTGGAAGTTGAAGGCTAGCCCCAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| 3UTR CAA 72 bp | CATCCTCGTCCCCCAGGGCTTCAGGGGCCCGGAGCTTaGAGTCCAGATTATAGTAGATGCCATCTACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPRPPGLQGPGA*SPDYSRCHLPV Trigger: GACAGGTAGATGGCATCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTGAAGCCCTGGGGGACGAGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGAGGGTAGGTTCAAGATCAGGCCTAGTACCTGGGGCAGGGCCAGCTGGCTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGEGRFKIRPSTWGRASWLKSCS*RTLLRA Trigger: TGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAG...CCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAACCTACCCTCTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000136679.8 |
||
| CDS-3UTR CCA 90 bp | GGGTATCCCAGATGTGCACCACTACAGCAGTTGATGGAGTGCTGGGGATGGAATCCCAAGAGACTGCGATaGGGGTTCAGCCGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GYPRCAPLQQLMECWGWNPKRLR*GFSRES Trigger: AGATTCCCGGCTGAACCCCCATCGCAGTCTCTTGGG...ATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000139097.2 |
||
| 3UTR CAA 72 bp | GGTCTCGGGTATCCCAGATGTGCACCACTACAGCAGTaGATGGAGTGCTGGGGATGGAATCCTGGCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GLGYPRCAPLQQ*MECWGWNPGLI Trigger: TATGAGGCCAGGATTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCCGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCAGCTGGGACAGGGGTCCTCTTATCTGTCAACTCCAGCTTTGGTTTGTTCTTGAAGGACGTTGTTaGGAGCATGGACAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: RASWDRGPLICQLQLWFVLEGRC*EHGQHT Trigger: TGTGTGCTGTCCATGCTCTCAACAACGTCCTTCAAG...AACAAACCAAAGCTGGAGTTGACAGATAAGAGGACCCCTGTCCCAGCTGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136609.8 |
||
| CDS-3UTR GCA 90 bp | GCCACAGAGGCACTTGGATCCTGCTTCCTTCTCCAGAATGAGCGTCTATTCACTTCAGACCCAAGACTGTaGTCAGAGTCCCTCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATEALGSCFLLQNERLFTSDPRL*SESLLQ Trigger: CTGCAAGAGGGACTCTGAGCACAGTCTTGGGTCTGA...AGTGAATAGACGCTCATTCTGGAGAAGGAAGCAGGATCCAAGTGCCTCTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| 3UTR CAA 72 bp | ACAGGGGTCCTCTTATCTGTCAACTCCAGCTTTGGTTaGTTTAGGCAGGGTCTCGGGTATCCCAGATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGVLLSVNSSFG*FRQGLGYPRCA Trigger: TGCACATCTGGGATACCCGAGACCCTGCCTAAACAAACCAAAGCTGGAGTTGACAGATAAGAGGACCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136609.8 |
||
| 3UTR CAA 72 bp | CCATCTACCCTCTTATCTGTCAACTCCAGCTTTGGTTaGTTTAGGCAGGGTCTCGGGTATCCCAGATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSTLLSVNSSFG*FRQGLGYPRCA Trigger: TGCACATCTGGGATACCCGAGACCCTGCCTAAACAAACCAAAGCTGGAGTTGACAGATAAGAGGGTAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139097.2 |
||
| 3UTR CAA 72 bp | CCCATTACCCTCTTATCTGTCAACTCCAGCTTTGGTTaGTTTAGGCAGGGTCTCGGGTATCCCAGATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PITLLSVNSSFG*FRQGLGYPRCA Trigger: TGCACATCTGGGATACCCGAGACCCTGCCTAAACAAACCAAAGCTGGAGTTGACAGATAAGAGGGTAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGACACCTCGCACAGGCCTaGGGCCAAGGCAGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVGGVGTLGQGAGLLRPGHLAQA*GQGSCQ Trigger: CTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTG...TCCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000206887.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTCACCTCGCACAGGCCTaGGGCCAAGGCAGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVVGGVGTLGQGAGLLRPHLAQA*GQGSCQ Trigger: CTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTG...AGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | GTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGAAGGGTGGACTCGGCCTaGCTTCCGGAGCCTGAGACA | + |
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Preference number: 5 (lower is better) Translates to: VVGGVGTLGQGAGLLRPGRVDSA*LPEPET Trigger: TGTCTCAGGCTCCGGAAGCAAGGCCGAGTCCACCCT...TCCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGAGGGTGGACTCGGCCTaGCTTCCGGAGCCTGAGACA | + |
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Preference number: 5 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWRVDSA*LPEPET Trigger: TGTCTCAGGCTCCGGAAGCAAGGCCGAGTCCACCCT...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCCACCTCGCACAGGCCTaGGGCCAAGGCAGCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSHLAQA*GQGSCQ Trigger: CTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTG...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | GCAGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGCCAGGAAGGTCCTCTaGCAGATTTCGTCGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: AVVGGVGTLGQGAGLLRPARKVL*QISSAA Trigger: GGCTGCCGACGAAATCTGCAAGAGGACCTTCCTGGC...AGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134398.3 |
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| CDS-3UTR CAA 90 bp | CTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCACACCTCGCACAGGCCTaGGGCCAAGGCAGCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LELQALPGTGHLGLWEQAHLAQA*GQGSCQ Trigger: CTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTG...TGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGGGTGGACTCGGCCTaGCTTCCGGAGCCTGAGACA | + |
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Preference number: 5 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGRVDSA*LPEPET Trigger: TGTCTCAGGCTCCGGAAGCAAGGCCGAGTCCACCCT...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
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| CDS CCA 90 bp | TCCTCCACCTCCTTGGTCACCACCAATAGCACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGGAAGGTCCTCCTCCTGTCCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: SSTSLVTTNSTSHRP*AKAAARKVLLLSHH Trigger: GTGGTGGGACAGGAGGAGGACCTTCCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTGCTATTGGTGGTGACCAAGGAGGTGGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAAGGGTGGACTCGGCCTaGCTTCCGGAGCCTGAGACA | + |
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Preference number: 5 (lower is better) Translates to: ELQALPGTGHLGLWEQAARVDSA*LPEPET Trigger: TGTCTCAGGCTCCGGAAGCAAGGCCGAGTCCACCCT...TGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | GCAGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTCAGGGGCCCGGAGCTTaGAGTCCAGATTATAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: AVVGGVGTLGQGAGLLRPQGPGA*SPDYSR Trigger: TCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTG...AGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
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| CDS-3UTR CAA 90 bp | GTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGAGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: VVGGVGTLGQGAGLLRPGAKELL*KDVVES Trigger: GCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGC...TCCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | AGTGGTTGGGGGAGTGGGGACCCTAGGGCAGGGTGCAGGCCTCCTGAGGCCTGGGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SGWGSGDPRAGCRPPEAWAKELL*KDVVES Trigger: GCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGC...CCAGGCCTCAGGAGGCCTGCACCCTGCCCTAGGGTCCCCACTCCCCCAACCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000206887.2 |
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| CDS CCA 90 bp | CCCAGCGACACAGGAGAGGGTAGGTTCAAGATCAGGCCTAGTACCTaGGGCAGGGCCAGCTGGGACAGGGGTCTCTTGCAGATTTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: PSDTGEGRFKIRPST*GRASWDRGLLQISS Trigger: CGACGAAATCTGCAAGAGACCCCTGTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAACCTACCCTCTCCTGTGTCGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121922.3 |
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| CDS CCA 90 bp | TCCTCCACCTCCTTGGTCACCACCAATAGCACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGGAAGGTCCTCTTGCAGATTTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: SSTSLVTTNSTSHRP*AKAAARKVLLQISS Trigger: CGACGAAATCTGCAAGAGGACCTTCCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTGCTATTGGTGGTGACCAAGGAGGTGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134398.3 |
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| CDS-3UTR CAA 90 bp | CCTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCCAGGGGCCCGGAGCTTaGAGTCCAGATTATAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: PGAAGPSRHWTLRTVGAGQGPGA*SPDYSR Trigger: TCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTG...GCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
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| CDS-3UTR CAA 90 bp | CGGGTATCCCAGATGTGCACCACTACAGCAGTTGATGGAGTGCTGGGGATGGAAAGGGTGGACTCGGCCTaGCTTCCGGAGCCTGAGACA | + |
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Preference number: 5 (lower is better) Translates to: RVSQMCTTTAVDGVLGMERVDSA*LPEPET Trigger: TGTCTCAGGCTCCGGAAGCAAGGCCGAGTCCACCCT...TTCCATCCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000136679.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: GAAGPSRHWTLRTVGAGSAKELL*KDVVES Trigger: GCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGC...GCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGGCAGCAGATCAGCTTGTGTTCAGCCAGCAGCCGGCCTCCTCCACCTCCGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: EQAADQLVFSQQPASSTSAKELL*KDVVES Trigger: GCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGC...GGAGGTGGAGGAGGCCGGCTGCTGGCTGAACACAAGCTGATCTGCTGCCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCACAGGGGCCCGGAGCTTaGAGTCCAGATTATAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: ELQALPGTGHLGLWEQAAQGPGA*SPDYSR Trigger: TCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTG...TGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
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| CDS-3UTR CAA 90 bp | CTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCACAGGGGCCCGGAGCTTaGAGTCCAGATTATAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: LELQALPGTGHLGLWEQAQGPGA*SPDYSR Trigger: TCTACTATAATCTGGACTCAAAGCTCCGGGCCCCTG...TGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 |
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| CDS-3UTR CAA 90 bp | CTGGAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LELQALPGTGHLGLWEQAAKELL*KDVVES Trigger: GCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGC...TGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGCAGGCCCTTCCAGGCACTGGACACTTAGGACTGTGGGAGCAGGCAGCAGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: ELQALPGTGHLGLWEQAAAKELL*KDVVES Trigger: GCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGC...TGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCTGGAAGGGCCTGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAGAGGGTAGGTTCAAGATCAGGCCTAGTACCTGGGGCAGGGCCAGCTGGGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: TGEGRFKIRPSTWGRASWAKELL*KDVVES Trigger: GCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGC...CCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAACCTACCCTCTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136609.8 ENSMUST00000136679.8 |
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| CDS TCA 90 bp | CTCTTGCAGATTTCGTCGGCAGCCTCCTGGCTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCATGGACAGCACACAGCTCTAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LLQISSAASWLKSCS*RTLLRAWTAHSSSR Trigger: GCGGCTAGAGCTGTGTGCTGTCCATGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGCCAGGAGGCTGCCGACGAAATCTGCAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000120852.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136609.8 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 ENSMUST00000208117.2 |
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| CDS-3UTR CAA 90 bp | GGGTCTCGGGTATCCCAGATGTGCACCACTACAGCAGTTGATGGAGTGCTGGGGGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: GSRVSQMCTTTAVDGVLGAKELL*KDVVES Trigger: GCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGC...CCCCAGCACTCCATCAACTGCTGTAGTGGTGCACATCTGGGATACCCGAGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000136609.8 ENSMUST00000136679.8 ENSMUST00000139097.2 |
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| CDS GCA 90 bp | CAGATGTCATTTCTTCTGGGAGAGGAGCCTTCAGACCCAAGACTGTaGTCAGAGTCCCTCTTGCAGATTTCGTCGGCAGCCTCCTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: QMSFLLGEEPSDPRL*SESLLQISSAASWL Trigger: TAGCCAGGAGGCTGCCGACGAAATCTGCAAGAGGGACTCTGAGCACAGTCTTGGGTCTGAAGGCTCCTCTCCCAGAAGAAATGACATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| CDS TCA 72 bp | GCATGGACAGCACACAGCTCTAGCCGCTGCCGCTCATaGTACACTGAGGGTGGACTCGGCCTTGCTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: AWTAHSSSRCRS*YTEGGLGLASG Trigger: TCCGGAAGCAAGGCCGAGTCCACCCTCAGTGTATCATGAGCGGCAGCGGCTAGAGCTGTGTGCTGTCCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000120852.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136609.8 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 ENSMUST00000208117.2 |
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| CDS CCA 72 bp | TTCAAGATCAGGCCTAGTACCTGGGGCAGGGCCAGCTaGGACAGGGGTCTCTTGCAGATTTCGTCGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FKIRPSTWGRAS*DRGLLQISSAA Trigger: GGCTGCCGACGAAATCTGCAAGAGACCCCTGTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121922.3 |
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| CDS CCA 72 bp | ACAGGAGAGGGTAGGTTCAAGATCAGGCCTAGTACCTaGGGCAGGGCCAGCTGGGACAGGGGTCTCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: TGEGRFKIRPST*GRASWDRGLLQ Trigger: CTGCAAGAGACCCCTGTCCCAGCTGGCCCTGCCCCAGGTACTAGGCCTGATCTTGAACCTACCCTCTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121922.3 |
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| CDS CCA 72 bp | TCCTTGGTCACCACCAATAGCACCTCGCACAGGCCTTaGGCCAAGGCAGCTGCCAGGAAGGTCCTCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLVTTNSTSHRP*AKAAARKVLLQ Trigger: CTGCAAGAGGACCTTCCTGGCAGCTGCCTTGGCCCAAGGCCTGTGCGAGGTGCTATTGGTGGTGACCAAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134398.3 |
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| CDS GCA 72 bp | TTTCTTCTGGGAGAGGAGCCTTCAGACCCAAGACTGTaGTCAGAGTCCCTCTTGCAGATTTCGTCGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FLLGEEPSDPRL*SESLLQISSAA Trigger: GGCTGCCGACGAAATCTGCAAGAGGGACTCTGAGCACAGTCTTGGGTCTGAAGGCTCCTCTCCCAGAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136679.8 |
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| CDS TCA 72 bp | ATTTCGTCGGCAGCCTCCTGGCTAAAGAGCTGCTCTTaGAGGACGTTGTTGAGAGCATGGACAGCACACAGC | + |
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Preference number: 6 (lower is better) Translates to: ISSAASWLKSCS*RTLLRAWTAHS Trigger: GCTGTGTGCTGTCCATGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGCCAGGAGGCTGCCGACGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000120852.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136609.8 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 ENSMUST00000208117.2 |
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| CDS CAA 72 bp | GATTTCGTCGGCAGCCTCCTGGCTAAAGAGCTGCTCTaGAAGGACGTTGTTGAGAGCATGGACAGCACACAG | + |
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Preference number: 6 (lower is better) Translates to: DFVGSLLAKELL*KDVVESMDSTQ Trigger: CTGTGTGCTGTCCATGCTCTCAACAACGTCCTTCAAGAGCAGCTCTTTAGCCAGGAGGCTGCCGACGAAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENSMUST00000035844.11 ENSMUST00000117324.8 ENSMUST00000118493.8 ENSMUST00000118628.8 ENSMUST00000120852.8 ENSMUST00000121922.3 ENSMUST00000134398.3 ENSMUST00000136609.8 ENSMUST00000136679.8 ENSMUST00000139097.2 ENSMUST00000206887.2 ENSMUST00000208117.2 |
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