Pregenerated sensors for JOSD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022426Ensembl transcript IDs: ENSMUST00000023061.7
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCAGGTGACATGCAGTGTGACTGCTGGAGTCTTGACAGTTTCTTaGCTCTGCATGTACTGTGTCCTCAGACCCCATGGTGCCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: LQVTCSVTAGVLTVS*LCMYCVLRPHGATG Trigger: TCCTGTGGCACCATGGGGTCTGAGGACACAGTACATGCAGAGCCAAGAAACTGTCAAGACTCCAGCAGTCACACTGCATGTCACCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 90 bp | GCCCTTCTTGGCTCCCTCTCTGAAATAGCAAAGGGTTCAATGGCTTaGCCTAAGTGTTCAGAGCTCCTACCTTCTTCCCCCAGGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: ALLGSLSEIAKGSMA*PKCSELLPSSPRHR Trigger: TCTGTGCCTGGGGGAAGAAGGTAGGAGCTCTGAACACTTAGGGCAAGCCATTGAACCCTTTGCTATTTCAGAGAGGGAGCCAAGAAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CCA 90 bp | CCCAAGGTCCTGCTTGTGACAATCAGCAAGGTCGGCTGTAACTTCTaGCTGGTAGTGATTGGAATGTCATTGTGCAGGGGCAGAGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: PKVLLVTISKVGCNF*LVVIGMSLCRGRVP Trigger: GGGAACTCTGCCCCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCTGATTGTCACAAGCAGGACCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR TCA 90 bp | CTGCAGAGACCATGGATCGGTAAGGGCTGGCCAGGTCACCTGCCTTaGAGGCCACCACAAACACATTGGTATGGGGGTATGGTAATTATT | + |
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Preference number: 1 (lower is better) Translates to: LQRPWIGKGWPGHLP*RPPQTHWYGGMVII Trigger: AATAATTACCATACCCCCATACCAATGTGTTTGTGGTGGCCTTCAAGGCAGGTGACCTGGCCAGCCCTTACCGATCCATGGTCTCTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 90 bp | GTGACATGCAGTGTGACTGCTGGAGTCTTGACAGTTTCTTGGCTCTaGATGTACTGTGTCCTCAGACCCCATGGTGCCACAGGAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: VTCSVTAGVLTVSWL*MYCVLRPHGATGEK Trigger: TTTCTCTCCTGTGGCACCATGGGGTCTGAGGACACAGTACATGCAGAGCCAAGAAACTGTCAAGACTCCAGCAGTCACACTGCATGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 90 bp | AAGGTCGGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATTGTaGAGGGGCAGAGTTCCCCATGGTGCCAAGCAGATCTGGTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: KVGCNFWLVVIGMSL*RGRVPHGAKQIWCR Trigger: TCTACACCAGATCTGCTTGGCACCATGGGGAACTCTGCCCCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 90 bp | GGAAGAGTCTCCTCTTCCCAAGAAATGGCTTACTATCACCGACAGTaGCAATGGACCCAAGGTCCTGCTTGTGACAATCAGCAAGGTCGG | + |
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Preference number: 1 (lower is better) Translates to: GRVSSSQEMAYYHRQ*QWTQGPACDNQQGR Trigger: CCGACCTTGCTGATTGTCACAAGCAGGACCTTGGGTCCATTGGCACTGTCGGTGATAGTAAGCCATTTCTTGGGAAGAGGAGACTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CCA 90 bp | AGGCCCAAGCAGATCTGTAGGGAAGAGTCTCCTCTTCCCAAGAAATaGCTTACTATCACCGACAGTGCCAATGGACCCAAGGTCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RPKQICREESPLPKK*LTITDSANGPKVLL Trigger: AAGCAGGACCTTGGGTCCATTGGCACTGTCGGTGATAGTAAGCCATTTCTTGGGAAGAGGAGACTCTTCCCTACAGATCTGCTTGGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 90 bp | GGGTTTAAAGGGACCAAGAAGAGGCCTAATGGACTGCAGGTGACATaGAGTGTGACTGCTGGAGTCTTGACAGTTTCTTGGCTCTGCATG | + |
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Preference number: 1 (lower is better) Translates to: GFKGTKKRPNGLQVT*SVTAGVLTVSWLCM Trigger: CATGCAGAGCCAAGAAACTGTCAAGACTCCAGCAGTCACACTGCATGTCACCTGCAGTCCATTAGGCCTCTTCTTGGTCCCTTTAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 90 bp | GCCAAACTCAGAGGCTCTAGCTTGATGCATACAGCCAACCTGAGATaGCTGCCACAGCTCTGGAGCTCAGGACGTGCCTACCGGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: AKLRGSSLMHTANLR*LPQLWSSGRAYRAQ Trigger: TTGAGCCCGGTAGGCACGTCCTGAGCTCCAGAGCTGTGGCAGCAATCTCAGGTTGGCTGTATGCATCAAGCTAGAGCCTCTGAGTTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR TCA 90 bp | TCATGGACTCCACGTGTGTGTGGCTCGTTTGCAGTGCCATTTGCACAGGCCCAATGCTGGGTGGCTCTGTaGCAGTCCACACATCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SWTPRVCGSFAVPFAQAQCWVAL*QSTHLS Trigger: GGACAGATGTGTGGACTGTCACAGAGCCACCCAGCA...TTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGAGTCCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR GCA 90 bp | GGACCCAAGGTCCTGCTTGTGACAATCAGCAAGGTCGGCTGTAACTTCTGGCTGCCTCAGACCCCATGGTaGCACAGGAGAGAAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GPKVLLVTISKVGCNFWLPQTPW*HRREKG Trigger: CCCCTTTTCTCTCCTGTGGCACCATGGGGTCTGAGG...CAGCCAGAAGTTACAGCCGACCTTGCTGATTGTCACAAGCAGGACCTTGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR GCA 90 bp | GGACCCAAGGTCCTGCTTGTGACAATCAGCAAGGTCGGCTGTAACTTCTGGCTGGCTGGCCAGGTCACCTaGCTTGAAGGCCACCACAAA | + |
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Preference number: 2 (lower is better) Translates to: GPKVLLVTISKVGCNFWLAGQVT*LEGHHK Trigger: TTTGTGGTGGCCTTCAAGGCAGGTGACCTGGCCAGC...CAGCCAGAAGTTACAGCCGACCTTGCTGATTGTCACAAGCAGGACCTTGGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 90 bp | CTAGCTCATGGACTCCACGTGTGTGTGGCTCGTTTGCAGTGCCATTaGCACAGGCCCAAGCAGATCTGTAGGGAAGAGTCTCCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LAHGLHVCVARLQCH*HRPKQICREESPLP Trigger: GGGAAGAGGAGACTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGAGTCCATGAGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CCA 90 bp | GTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGTAGGGAAGAGTCTCCTCTTGCTGCCACAGCTCTaGAGCTCAGGACGTGCCTAC | + |
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Preference number: 2 (lower is better) Translates to: VCSAICTGPSRSVGKSLLLLPQL*SSGRAY Trigger: GTAGGCACGTCCTGAGCTCCAGAGCTGTGGCAGCAA...GAGGAGACTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR GCA 90 bp | GTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGTAGGGAAGAGTCTCCTCGGACTGCAGGTGACATaGAGTGTGACTGCTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: VCSAICTGPSRSVGKSLLGLQVT*SVTAGV Trigger: GACTCCAGCAGTCACACTGCATGTCACCTGCAGTCC...GAGGAGACTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CCA 90 bp | GGACCCAAGGTCCTGCTTGTGACAATCAGCAAGGTCGGCTGTAACTTCTGGCTGTGTCCTCAGACCCCATaGTGCCACAGGAGAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: GPKVLLVTISKVGCNFWLCPQTP*CHRREK Trigger: CTTTTCTCTCCTGTGGCACCATGGGGTCTGAGGACA...CAGCCAGAAGTTACAGCCGACCTTGCTGATTGTCACAAGCAGGACCTTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 90 bp | AGCAAGGTCGGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATaGTGCAGGGGCAGAGTTCCCCATGGTGCCAAGCAGATCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SKVGCNFWLVVIGMS*CRGRVPHGAKQIWC Trigger: ACACCAGATCTGCTTGGCACCATGGGGAACTCTGCCCCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 90 bp | TTGTACATCCCACTAGCTCATGGACTCCACGTGTGTGTGGCTCGTTaGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGTAGGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LYIPLAHGLHVCVAR*QCHLHRPKQICREE Trigger: CTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGAGTCCATGAGCTAGTGGGATGTACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR TCA 90 bp | CCATGGTGCCACAGGAGAGAAAAGGGGCGGCCTTTCCGTAAGCCTGAAGCATCAGAAGGGAAAACCCAATaGGATGTTTGGGGAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PWCHRREKGRPFRKPEASEGKTQ*DVWGSG Trigger: TCCACTTCCCCAAACATCTCATTGGGTTTTCCCTTC...TGATGCTTCAGGCTTACGGAAAGGCCGCCCCTTTTCTCTCCTGTGGCACCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR TCA 90 bp | GGTAGTGATTGGAATGTCATTGTGCAGGGGCAGAGTTCCCCATGGTGCCAAGCAGTGAAGAGCCACCAGTaGCTACCCTACTCTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GSDWNVIVQGQSSPWCQAVKSHQ*LPYSGF Trigger: AAAGCCAGAGTAGGGTAGTCACTGGTGGCTCTTCAC...TGCTTGGCACCATGGGGAACTCTGCCCCTGCACAATGACATTCCAATCACTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 90 bp | AGGCCTAATGGACTGCAGGTGACATGCAGTGTGACTGCTGGAGTCTaGACAGTTTCTTGGCTCTGCATGTACTGTGTCCTCAGACCCCAT | + |
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Preference number: 2 (lower is better) Translates to: RPNGLQVTCSVTAGV*TVSWLCMYCVLRPH Trigger: ATGGGGTCTGAGGACACAGTACATGCAGAGCCAAGAAACTGTCAAGACTCCAGCAGTCACACTGCATGTCACCTGCAGTCCATTAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR TCA 90 bp | CCATGGTGCCACAGGAGAGAAAAGGGGCGGCCTTTCCGTAAGCCTGAAGCATCATCTTGGCTCCCTCTCTaGAATAGCAAAGGGTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: PWCHRREKGRPFRKPEASSWLPL*NSKGFN Trigger: ATTGAACCCTTTGCTATTTCAGAGAGGGAGCCAAGA...TGATGCTTCAGGCTTACGGAAAGGCCGCCCCTTTTCTCTCCTGTGGCACCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGCAGATCTGTAGGGAAGAGTCTCCTCTTCCCAAGAAATGGCTTACTATCGGGCAGAGTTCCCCATaGTGCCAAGCAGATCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PKQICREESPLPKKWLTIGQSSP*CQADLV Trigger: CACCAGATCTGCTTGGCACCATGGGGAACTCTGCCC...GATAGTAAGCCATTTCTTGGGAAGAGGAGACTCTTCCCTACAGATCTGCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR TCA 90 bp | ACAATCAGCAAGGTCGGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATTGCCAGGTCACCTGCCTTaGAGGCCACCACAAACACAT | + |
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Preference number: 2 (lower is better) Translates to: TISKVGCNFWLVVIGMSLPGHLP*RPPQTH Trigger: ATGTGTTTGTGGTGGCCTTCAAGGCAGGTGACCTGG...CAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCTGATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGAGCCTGTATCAAGACCTTATGGAAAGGGAGAAATAACCCAGCCCCCTACACATCTGTCCTATTaGACTGGCAAATCTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: PAEPVSRPYGKGEITQPPTHLSY*TGKSEG Trigger: CCCTTCAGATTTGCCAGTGCAATAGGACAGATGTGT...AGGGGGCTGGGTTATTTCTCCCTTTCCATAAGGTCTTGATACAGGCTCTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGTCGGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATTGTGCAGGGACATGCAGTGTGACTaGTGGAGTCTTGACAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: SKVGCNFWLVVIGMSLCRDMQCD*WSLDSF Trigger: GAAACTGTCAAGACTCCAGCAGTCACACTGCATGTC...CCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CCA 90 bp | CCACGTGTGTGTGGCTCGTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGGCAATTCACCTATTTTaGAATAGCAGAGCCTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: PRVCGSFAVPFAQAQADLAIHLF*NSRASY Trigger: ATAAGAGGCTCTGCTATTCCAAAATAGGTGAATTGC...CAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGCAGATCTGTAGGGAAGAGTCTCCTCTTCCCAAGAAATGGCTTACTATCCTGGCTGGTAGTGATTaGAATGTCATTGTGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PKQICREESPLPKKWLTILAGSD*NVIVQG Trigger: CCCCTGCACAATGACATTCCAATCACTACCAGCCAG...GATAGTAAGCCATTTCTTGGGAAGAGGAGACTCTTCCCTACAGATCTGCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGGTCGGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATTGTGCAGGGTCTTGACAGTTTCTTaGCTCTGCATGTACTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SKVGCNFWLVVIGMSLCRVLTVS*LCMYCV Trigger: GACACAGTACATGCAGAGCCAAGAAACTGTCAAGAC...CCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR TCA 90 bp | AACTATGAGTACTCTCCCTGTTCATTGTCTTGTCCCAAAGCCTCCCCAGTCAATTTGCACTGGCAAATCTaGAGGGAAAACCCAATGAGA | + |
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Preference number: 2 (lower is better) Translates to: NYEYSPCSLSCPKASPVNLHWQI*RENPMR Trigger: TCTCATTGGGTTTTCCCTTCAGATTTGCCAGTGCAA...ATTGACTGGGGAGGCTTTGGGACAAGACAATGAACAGGGAGAGTACTCATAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CCA 90 bp | GATCTAGAACTAGTTGAAGTGGGGCAAGCCAACCCTGTTTGTCAAAGAAACTACGTGACTACCCTACTCTaGCTTTACCCACGTGGTATT | + |
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Preference number: 2 (lower is better) Translates to: DLELVEVGQANPVCQRNYVTTLL*LYPRGI Trigger: AATACCACGTGGGTAAAGCCAGAGTAGGGTAGTCAC...GTAGTTTCTTTGACAAACAGGGTTGGCTTGCCCCACTTCAACTAGTTCTAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CCA 90 bp | AACTATGAGTACTCTCCCTGTTCATTGTCTTGTCCCAAAGCCTCCCCAGTCAATTGTATCAAGACCTTATaGAAAGGGAGAAATAACCCA | + |
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Preference number: 2 (lower is better) Translates to: NYEYSPCSLSCPKASPVNCIKTL*KGRNNP Trigger: TGGGTTATTTCTCCCTTTCCATAAGGTCTTGATACA...ATTGACTGGGGAGGCTTTGGGACAAGACAATGAACAGGGAGAGTACTCATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | CCACGTGTGTGTGGCTCGTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGACAGCCAACCTGAGATaGCTGCCACAGCTCTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: PRVCGSFAVPFAQAQADLTANLR*LPQLWS Trigger: GCTCCAGAGCTGTGGCAGCAATCTCAGGTTGGCTGT...CAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR TCA 72 bp | TCTGGAGCTCAGGACGTGCCTACCGGGCTCAAACCCTaGAGCTTACCTTCATGGCAGTTCCTCGCCCAACTC | + |
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Preference number: 3 (lower is better) Translates to: SGAQDVPTGLKP*SLPSWQFLAQL Trigger: GAGTTGGGCGAGGAACTGCCATGAAGGTAAGCTTCAGGGTTTGAGCCCGGTAGGCACGTCCTGAGCTCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CCA 72 bp | ATGCATACAGCCAACCTGAGATTGCTGCCACAGCTCTaGAGCTCAGGACGTGCCTACCGGGCTCAAACCCTG | + |
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Preference number: 3 (lower is better) Translates to: MHTANLRLLPQL*SSGRAYRAQTL Trigger: CAGGGTTTGAGCCCGGTAGGCACGTCCTGAGCTCCAGAGCTGTGGCAGCAATCTCAGGTTGGCTGTATGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR TCA 72 bp | CCATGGATCGGTAAGGGCTGGCCAGGTCACCTGCCTTaGAGGCCACCACAAACACATTGGTATGGGGGTATG | + |
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Preference number: 3 (lower is better) Translates to: PWIGKGWPGHLP*RPPQTHWYGGM Trigger: CATACCCCCATACCAATGTGTTTGTGGTGGCCTTCAAGGCAGGTGACCTGGCCAGCCCTTACCGATCCATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 72 bp | AGAGACCATGGATCGGTAAGGGCTGGCCAGGTCACCTaGCTTGAAGGCCACCACAAACACATTGGTATGGGG | + |
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Preference number: 3 (lower is better) Translates to: RDHGSVRAGQVT*LEGHHKHIGMG Trigger: CCCCATACCAATGTGTTTGTGGTGGCCTTCAAGGCAGGTGACCTGGCCAGCCCTTACCGATCCATGGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | CAGACCTGCAGAGACCATGGATCGGTAAGGGCTGGCCAGGTCACCTGCCTTGAAAAGAGGTCTGGAGGGTaGAGACAAAGAGGGTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: QTCRDHGSVRAGQVTCLEKRSGG*RQRGSN Trigger: GTTTGACCCTCTTTGTCTCAACCCTCCAGACCTCTT...TTCAAGGCAGGTGACCTGGCCAGCCCTTACCGATCCATGGTCTCTGCAGGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR TCA 72 bp | AGATCTGGTGTAGAAAATGGTGCAGATGACCATGGCTaGGCGCAGTGCAGTAGCCACTCGAGGCCTCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: RSGVENGADDHG*AQCSSHSRPLP Trigger: TGGCAGAGGCCTCGAGTGGCTACTGCACTGCGCTCAGCCATGGTCATCTGCACCATTTTCTACACCAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR TCA 72 bp | TCACCGACAGTGCCAATGGACCCAAGGTCCTGCTTGTaGCAATCAGCAAGGTCGGCTGTAACTTCTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SPTVPMDPRSCL*QSARSAVTSGW Trigger: CCAGCCAGAAGTTACAGCCGACCTTGCTGATTGTCACAAGCAGGACCTTGGGTCCATTGGCACTGTCGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 72 bp | GACTCCACGTGTGTGTGGCTCGTTTGCAGTGCCATTTaGACAGGCCCAAGCAGATCTGTAGGGAAGAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: DSTCVWLVCSAI*TGPSRSVGKSL Trigger: GAGACTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | GGACCCAAGGTCCTGCTTGTGACAATCAGCAAGGTCGGCTGTAACTTCTGGCTGGTGATTGGAATGTCATaGTGCAGGGGCAGAGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: GPKVLLVTISKVGCNFWLVIGMS*CRGRVP Trigger: GGGAACTCTGCCCCTGCACAATGACATTCCAATCAC...CAGCCAGAAGTTACAGCCGACCTTGCTGATTGTCACAAGCAGGACCTTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 72 bp | AGTGTGACTGCTGGAGTCTTGACAGTTTCTTGGCTCTaGATGTACTGTGTCCTCAGACCCCATGGTGCCACA | + |
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Preference number: 3 (lower is better) Translates to: SVTAGVLTVSWL*MYCVLRPHGAT Trigger: TGTGGCACCATGGGGTCTGAGGACACAGTACATGCAGAGCCAAGAAACTGTCAAGACTCCAGCAGTCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 72 bp | GGGACCAAGAAGAGGCCTAATGGACTGCAGGTGACATaGAGTGTGACTGCTGGAGTCTTGACAGTTTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: GTKKRPNGLQVT*SVTAGVLTVSW Trigger: CCAAGAAACTGTCAAGACTCCAGCAGTCACACTGCATGTCACCTGCAGTCCATTAGGCCTCTTCTTGGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | TCATGGACTCCACGTGTGTGTGGCTCGTTTGCAGTGCCATTTGCACAGGCCCAAAACCCAATGAGATGTTaGGGGAAGTGGACTGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: SWTPRVCGSFAVPFAQAQNPMRC*GKWTVE Trigger: CTCTACAGTCCACTTCCCCAAACATCTCATTGGGTT...TTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGAGTCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | GGACCCAAGGTCCTGCTTGTGACAATCAGCAAGGTCGGCTGTAACTTCTGGCTGGCCACCACAAACACATaGGTATGGGGGTATGGTAAT | + |
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Preference number: 3 (lower is better) Translates to: GPKVLLVTISKVGCNFWLATTNT*VWGYGN Trigger: ATTACCATACCCCCATACCAATGTGTTTGTGGTGGC...CAGCCAGAAGTTACAGCCGACCTTGCTGATTGTCACAAGCAGGACCTTGGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 72 bp | TGTAACTTCTGGCTGGTAGTGATTGGAATGTCATTGTaGAGGGGCAGAGTTCCCCATGGTGCCAAGCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: CNFWLVVIGMSL*RGRVPHGAKQI Trigger: GATCTGCTTGGCACCATGGGGAACTCTGCCCCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCCTCTTCCCAAGAAATGGCTTACTATCACCGACAGTGCCAATGGACCCATACTCTCCCTGTTCATaGTCTTGTCCCAAAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLFPRNGLLSPTVPMDPYSPCS*SCPKAS Trigger: GGAGGCTTTGGGACAAGACAATGAACAGGGAGAGTA...TGGGTCCATTGGCACTGTCGGTGATAGTAAGCCATTTCTTGGGAAGAGGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR GCA 72 bp | TCCTCTTCCCAAGAAATGGCTTACTATCACCGACAGTaGCAATGGACCCAAGGTCCTGCTTGTGACAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSQEMAYYHRQ*QWTQGPACDNQ Trigger: CTGATTGTCACAAGCAGGACCTTGGGTCCATTGGCACTGTCGGTGATAGTAAGCCATTTCTTGGGAAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CCA 72 bp | TCCCAAGAAATGGCTTACTATCACCGACAGTGCCAATaGACCCAAGGTCCTGCTTGTGACAATCAGCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SQEMAYYHRQCQ*TQGPACDNQQG Trigger: ACCTTGCTGATTGTCACAAGCAGGACCTTGGGTCCATTGGCACTGTCGGTGATAGTAAGCCATTTCTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CCA 72 bp | CAGATCTGTAGGGAAGAGTCTCCTCTTCCCAAGAAATaGCTTACTATCACCGACAGTGCCAATGGACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QICREESPLPKK*LTITDSANGPK Trigger: CTTGGGTCCATTGGCACTGTCGGTGATAGTAAGCCATTTCTTGGGAAGAGGAGACTCTTCCCTACAGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CCA 72 bp | AAATGCTTAAGCGTCTTTGTACATCCCACTAGCTCATaGACTCCACGTGTGTGTGGCTCGTTTGCAGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KCLSVFVHPTSS*TPRVCGSFAVP Trigger: TGGCACTGCAAACGAGCCACACACACGTGGAGTCCATGAGCTAGTGGGATGTACAAAGACGCTTAAGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | CCCAAGCAGATCTGTAGGGAAGAGTCTCCTCTTCCCAAGAAATGGCTTACTATCAGTCTTGACAGTTTCTaGGCTCTGCATGTACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PKQICREESPLPKKWLTISLDSF*ALHVLC Trigger: ACACAGTACATGCAGAGCCAAGAAACTGTCAAGACT...GATAGTAAGCCATTTCTTGGGAAGAGGAGACTCTTCCCTACAGATCTGCTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGGTCGGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATTGTGCAGGAACGGCCTTGTTGGATaGAAGATACATGTGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SKVGCNFWLVVIGMSLCRNGLVG*KIHVQK Trigger: TTTCTGCACATGTATCTTCAATCCAACAAGGCCGTT...CCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR-3UTR CAA 90 bp | ACAATCAGCAAGGTCGGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATTGTTCACCCCAACAAGCTaGCTCAGGATTAACATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TISKVGCNFWLVVIGMSLFTPTS*LRINMQ Trigger: TTGCATGTTAATCCTGAGCAAGCTTGTTGGGGTGAA...CAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCTGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR TCA 72 bp | GTATTAGGCATATCTTTCACCACTGTCTTGCTAGAATaGTGTGCAATTCACCTATTTTGGAATAGCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLGISFTTVLLE*CAIHLFWNSRA Trigger: GGCTCTGCTATTCCAAAATAGGTGAATTGCACATCATTCTAGCAAGACAGTGGTGAAAGATATGCCTAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR TCA 90 bp | TCATGGACTCCACGTGTGTGTGGCTCGTTTGCAGTGCCATTTGCACAGGCCCAATCGGCCCTCCAGCTCTaGTGGGCTTCCACTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWTPRVCGSFAVPFAQAQSALQL*WASTSS Trigger: GGAAGAAGTGGAAGCCCATCAGAGCTGGAGGGCCGA...TTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGAGTCCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR GCA 90 bp | CCATGGTGCCACAGGAGAGAAAAGGGGCGGCCTTTCCGTAAGCCTGAAGCATCAGAGCACAGAGCTCCCTaGGCTGCTTCTCATGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PWCHRREKGRPFRKPEASEHRAP*AASHGR Trigger: TCTACCATGAGAAGCAGCGCAGGGAGCTCTGTGCTC...TGATGCTTCAGGCTTACGGAAAGGCCGCCCCTTTTCTCTCCTGTGGCACCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR TCA 90 bp | GCTGGCCAGGTCACCTGCCTTGAAGGCCACCACAAACACATTGGTATGGGGGTAACGTTGTTGAGAGCATaGAGAGCACAGAGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGQVTCLEGHHKHIGMGVTLLRA*RAQSSL Trigger: CAGGGAGCTCTGTGCTCTTCATGCTCTCAACAACGT...TACCCCCATACCAATGTGTTTGTGGTGGCCTTCAAGGCAGGTGACCTGGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR TCA 90 bp | TGTATCAAGACCTTATGGAAAGGGAGAAATAACCCAGCCCCCTCAAAGGACGCCGCAGCGTTTCCCGCGTaGAGGCGTTGCTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CIKTLWKGRNNPAPSKDAAAFPA*RRCCPG Trigger: TCCAGGACAGCAACGCCTTCACGCGGGAAACGCTGC...GGCGTCCTTTGAGGGGGCTGGGTTATTTCTCCCTTTCCATAAGGTCTTGATACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CCA 90 bp | GTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGTAGGGAAGAGTCTCCTCGAGAGGCAACTTGAGTaGACCCCAGCAGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCSAICTGPSRSVGKSLLERQLE*TPAEAG Trigger: TCCAGCCTCTGCTGGGGTCCACTCAAGTTGCCTCTC...GAGGAGACTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 72 bp | AGAGGCTCTAGCTTGATGCATACAGCCAACCTGAGATaGCTGCCACAGCTCTGGAGCTCAGGACGTGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSLMHTANLR*LPQLWSSGRAY Trigger: GTAGGCACGTCCTGAGCTCCAGAGCTGTGGCAGCAATCTCAGGTTGGCTGTATGCATCAAGCTAGAGCCTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 72 bp | GGACTCCACGTGTGTGTGGCTCGTTTGCAGTGCCATTaGCACAGGCCCAAGCAGATCTGTAGGGAAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLHVCVARLQCH*HRPKQICREES Trigger: AGACTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 72 bp | CCACTAGCTCATGGACTCCACGTGTGTGTGGCTCGTTaGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLAHGLHVCVAR*QCHLHRPKQIC Trigger: ACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGAGTCCATGAGCTAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR TCA 90 bp | CCATGGTGCCACAGGAGAGAAAAGGGGCGGCCTTTCCGTAAGCCTGAAGCATCACCTGGAAGACGTTGTTaGGAGCATGAAGAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PWCHRREKGRPFRKPEASPGRRC*EHEEHR Trigger: TCTGTGCTCTTCATGCTCTCAACAACGTCTTCCAGG...TGATGCTTCAGGCTTACGGAAAGGCCGCCCCTTTTCTCTCCTGTGGCACCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 72 bp | GGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATaGTGCAGGGGCAGAGTTCCCCATGGTGCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCNFWLVVIGMS*CRGRVPHGAKQ Trigger: CTGCTTGGCACCATGGGGAACTCTGCCCCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR GCA 90 bp | GTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGTAGGGAAGAGTCTCCTCCTCTGGAAAATCTCCTaGAGCGTTTCCCGCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCSAICTGPSRSVGKSLLLWKIS*SVSRVK Trigger: CTTCACGCGGGAAACGCTGCAGGAGATTTTCCAGAG...GAGGAGACTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CCA 90 bp | TCCACGTGTGTGTGGCTCGTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTAGCATGCTCTTCTTGTaGGGCGTCACCATAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: STCVWLVCSAICTGPSRSSMLFL*GVTIVF Trigger: GAACACTATGGTGACGCCCCACAAGAAGAGCATGCT...AGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR GCA 90 bp | AGGCCTAATGGACTGCAGGTGACATGCAGTGTGACTGCTGGAGTCTTGACAGTTTCCCATTTCCCAGCATaGTCTTCTTGTGGGGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPNGLQVTCSVTAGVLTVSHFPA*SSCGAS Trigger: TGACGCCCCACAAGAAGAGCATGCTGGGAAATGGGA...AACTGTCAAGACTCCAGCAGTCACACTGCATGTCACCTGCAGTCCATTAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CCA 90 bp | GTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTGTAGGGAAGAGTCTCCTCCCGAGGATTCAGCTTTaGCCTTGTCTCCTTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VCSAICTGPSRSVGKSLLPRIQL*PCLLSM Trigger: CATGGAAAGGAGACAAGGCCAAAGCTGAATCCTCGG...GAGGAGACTCTTCCCTACAGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CCA 90 bp | AGTCTCCTCTTCCCAAGAAATGGCTTACTATCACCGACAGTGCCAATGGACCCAGCCTCCAATCCACTCTaGCATCTTGAGTTTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPRNGLLSPTVPMDPASNPL*HLEFGV Trigger: GACTCCAAACTCAAGATGCCAGAGTGGATTGGAGGC...TGGGTCCATTGGCACTGTCGGTGATAGTAAGCCATTTCTTGGGAAGAGGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 72 bp | AGAAACTACACAGACGCCAAACTCAGAGGCTCTAGCTaGATGCATACAGCCAACCTGAGATTGCTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RNYTDAKLRGSS*MHTANLRLLPQ Trigger: CTGTGGCAGCAATCTCAGGTTGGCTGTATGCATCAAGCTAGAGCCTCTGAGTTTGGCGTCTGTGTAGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR GCA 90 bp | GCCCCCTCAAAGGACGCCCTTCTTGGCTCCCTCTCTGAAATAGCAAAGGGTTCATTTGGTTTGAAGTGCTaGCATGATGACATTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: APSKDALLGSLSEIAKGSFGLKC*HDDIHI Trigger: GATGTGAATGTCATCATGGCAGCACTTCAAACCAAA...TGAACCCTTTGCTATTTCAGAGAGGGAGCCAAGAAGGGCGTCCTTTGAGGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR GCA 90 bp | ACCCTGAAGCTTACCTTCATGGCAGTTCCTCGCCCAACTCTGTCCCAAACTATGGCCTTTGGTTTGAAGTaGTGCCATGATGACATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLKLTFMAVPRPTLSQTMAFGLK*CHDDIH Trigger: GTGAATGTCATCATGGCAGCACTTCAAACCAAAGGC...CATAGTTTGGGACAGAGTTGGGCGAGGAACTGCCATGAAGGTAAGCTTCAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR GCA 90 bp | AGCAAGGTCGGCTGTAACTTCTGGCTGGTAGTGATTGGAATGTCATTGTGCAGGCGAACACAGATCCAGTaGTGTCTTTTGAGAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKVGCNFWLVVIGMSLCRRTQIQ*CLLRGN Trigger: GTTGCCTCTCAAAAGACAGCACTGGATCTGTGTTCG...CCTGCACAATGACATTCCAATCACTACCAGCCAGAAGTTACAGCCGACCTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| 3UTR CAA 72 bp | GCCAGGTCACCTGCCTTGAAGGCCACCACAAACACATaGGTATGGGGGTATGGTAATTATTTCCCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ARSPALKATTNT*VWGYGNYFPSF Trigger: AAATGAGGGGAAATAATTACCATACCCCCATACCAATGTGTTTGTGGTGGCCTTCAAGGCAGGTGACCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR TCA 90 bp | GATCTAGAACTAGTTGAAGTGGGGCAAGCCAACCCTGTTTGTCAAAGAAACTACTCCACTCTGGCATCTTaGGTTTGGAGTCAAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLELVEVGQANPVCQRNYSTLAS*VWSQGC Trigger: ACAACCTTGACTCCAAACTCAAGATGCCAGAGTGGA...GTAGTTTCTTTGACAAACAGGGTTGGCTTGCCCCACTTCAACTAGTTCTAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CAA 90 bp | AGCCAACCTGAGATTGCTGCCACAGCTCTGGAGCTCAGGACGTGCCTACCGGGCCCCAGCATGCTCTTCTaGTGGGGCGTCACCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQPEIAATALELRTCLPGPSMLF*WGVTIV Trigger: CACTATGGTGACGCCCCACAAGAAGAGCATGCTGGG...GCCCGGTAGGCACGTCCTGAGCTCCAGAGCTGTGGCAGCAATCTCAGGTTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CAA 90 bp | AGCCAACCTGAGATTGCTGCCACAGCTCTGGAGCTCAGGACGTGCCTACCGGGCCCCACGTCCCTTCGCTaGTCCCACCAAACAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQPEIAATALELRTCLPGPTSLR*SHQTAS Trigger: TGAAGCTGTTTGGTGGGACAAGCGAAGGGACGTGGG...GCCCGGTAGGCACGTCCTGAGCTCCAGAGCTGTGGCAGCAATCTCAGGTTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS GCA 90 bp | TGGGGCGTCACCATAGTGTTCGGAGACAGCCTCTGGAAAATCTCCTaGAGCGTTTCCCGCGTGAAGGCGTTGCTGTCCTGGAAGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WGVTIVFGDSLWKIS*SVSRVKALLSWKTL Trigger: CAACGTCTTCCAGGACAGCAACGCCTTCACGCGGGAAACGCTGCAGGAGATTTTCCAGAGGCTGTCTCCGAACACTATGGTGACGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CAA 90 bp | AGCCAACCTGAGATTGCTGCCACAGCTCTGGAGCTCAGGACGTGCCTACCGGGCTCCGAGGATTCAGCTTaGGCCTTGTCTCCTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQPEIAATALELRTCLPGSEDSA*ALSPFH Trigger: ATGGAAAGGAGACAAGGCCAAAGCTGAATCCTCGGA...GCCCGGTAGGCACGTCCTGAGCTCCAGAGCTGTGGCAGCAATCTCAGGTTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CAA 90 bp | TCCACGTGTGTGTGGCTCGTTTGCAGTGCCATTTGCACAGGCCCAAGCAGATCTTCCCGCGTGAAGGCGTaGCTGTCCTGGAAGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STCVWLVCSAICTGPSRSSRVKA*LSWKTL Trigger: CAACGTCTTCCAGGACAGCAACGCCTTCACGCGGGA...AGATCTGCTTGGGCCTGTGCAAATGGCACTGCAAACGAGCCACACACACGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS CCA 90 bp | ATGCTCTTCTTGTGGGGCGTCACCATAGTGTTCGGAGACAGCCTCTaGAAAATCTCCTGCAGCGTTTCCCGCGTGAAGGCGTTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MLFLWGVTIVFGDSL*KISCSVSRVKALLS Trigger: GGACAGCAACGCCTTCACGCGGGAAACGCTGCAGGAGATTTTCCAGAGGCTGTCTCCGAACACTATGGTGACGCCCCACAAGAAGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CAA 90 bp | CCAATGAGATGTTTGGGGAAGTGGACTGTAGAGGCCACAGCACATCAAAGAGGTTTGTGGGGGCGCTGCTaGGGGAAGGTCCGAGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: PMRCLGKWTVEATAHQRGLWGRC*GKVRGF Trigger: GAATCCTCGGACCTTCCCCAAGCAGCGCCCCCACAA...ACCTCTTTGATGTGCTGTGGCCTCTACAGTCCACTTCCCCAAACATCTCATTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CAA 90 bp | CCAGCAGAGCCTGTATCAAGACCTTATGGAAAGGGAGAAATAACCCAGCCCCCTCTTTTGAGAGGCAACTaGAGTGGACCCCAGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAEPVSRPYGKGEITQPPLLRGN*SGPQQR Trigger: CCTCTGCTGGGGTCCACTCAAGTTGCCTCTCAAAAG...AGGGGGCTGGGTTATTTCTCCCTTTCCATAAGGTCTTGATACAGGCTCTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS-3UTR CAA 90 bp | ACCCTGAAGCTTACCTTCATGGCAGTTCCTCGCCCAACTCTGTCCCAAACTATGGATTCAGCTTTGGCCTaGTCTCCTTTCCATGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TLKLTFMAVPRPTLSQTMDSALA*SPFHGT Trigger: CGTGCCATGGAAAGGAGACAAGGCCAAAGCTGAATC...CATAGTTTGGGACAGAGTTGGGCGAGGAACTGCCATGAAGGTAAGCTTCAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS CCA 72 bp | TTGTGGGGCGTCACCATAGTGTTCGGAGACAGCCTCTaGAAAATCTCCTGCAGCGTTTCCCGCGTGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LWGVTIVFGDSL*KISCSVSRVKA Trigger: CGCCTTCACGCGGGAAACGCTGCAGGAGATTTTCCAGAGGCTGTCTCCGAACACTATGGTGACGCCCCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
||
| CDS GCA 72 bp | ACCATAGTGTTCGGAGACAGCCTCTGGAAAATCTCCTaGAGCGTTTCCCGCGTGAAGGCGTTGCTGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TIVFGDSLWKIS*SVSRVKALLSW Trigger: CCAGGACAGCAACGCCTTCACGCGGGAAACGCTGCAGGAGATTTTCCAGAGGCTGTCTCCGAACACTATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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| CDS CAA 72 bp | CCTCCCACCTCACGAACACAGATCCAGTGCTGTCTTTaGAGAGGCAACTTGAGTGGACCCCAGCAGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPTSRTQIQCCL*RGNLSGPQQRL Trigger: CAGCCTCTGCTGGGGTCCACTCAAGTTGCCTCTCAAAAGACAGCACTGGATCTGTGTTCGTGAGGTGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023061.7 |
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